CmaCh12G008970 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G008970
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	villin-4-like
Location	Cma_Chr12: 6837636 .. 6840423 (-)
RNA-Seq Expression	CmaCh12G008970
Synteny	CmaCh12G008970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTACGCCGATGTGCAGGGAATTTGAAGGTACATCCCTTTCTCGTTCCAGTCCATAGATATATGTGTTTTTCATTTCGTATTTACTGAGTTTTATTGGGAAATAGATGTATTCCTATGATGTCCTATTTTCACTTTAGTTTGATTCTTTGTTTTAATAGCTGGGGTAAGTAGTGGGAGCCTAAGGCCTTATGCCCCTAGTCCCTATCTGTCCCAAGTCAGTTCTTCAAGACAAGAAGAGTTTAAAGCTATCAAAGTTATTAAATTTTCAACTTAGAGCTTGAACCCAAACCTTGGAGTATCTCCAAATATCCCAAGCAAGGATGCGGAGATACTCAAACCCTTCTCACTAGAACAATCATTTGTCCTTGGTATCTATAAATACTCAACATTGACAAGCTAGTGACAGTAAATAACCTTATGTCTTCCCCAAGAAGGTTGGTTAATGTGAAGTTTTGCAGGTGGTGGAGGTACATAACTTTGATCAAGATGATCTGATGACTGAAGACATGTACATTCTGGATAATCACTCAGAGATATTTGTATGGGTTGGCCAACAAGTCGACTCTAGGAGTAGACTACAAGCTTTAACTATTGGTGAGGTACGAATAATGTATTCCCTGCATAGTTATGTTAATCTTGTAAGCTCAGGGCAGCCAACATGACATGTTACTTTTCATTGTCTCTCCTCGTTTCATCCGCTATTCTATTGGGAAGGAACTTCATGGCATCCTGTCGGTCTCTTTCTTTTCTAATATCATCAATATCATGTCCTTTCCATATCTTGGGAGTCTGATACTAAAAGTTTACAGTTTGTTCATTGATAATTTTGTCTTTGAAAGTTTCTGGTCAACTTTTCAACCAAACGGAGGATTTTCACTATTGATAACTTTCTTTGTATCGCAACAGAAATTCCTTGAACATGATTTTCTGTTGGAAAGTCTATCTTCTAAAGCTCCAGTGTATATTATCACGGAAGGAAGTGAACCTCCATTCTTCACACGCTTCTTCACATGGGACTCTGCAAAATCTTCAGTAAGAATTCAACAATTATTCTAGTATTACCTAAAAATGTTAGCAAGATATTGACATTTTCAATCATGAACAGATGCATGGAAACTCGTTTCAAAGGAAACTTACAATAGTCAAAAGCGGTGGCACTCCTACTGTAGATGTAAGGTTTTTTCTATCAATAGTTTCACTTCTTAAACTCCCCACCAAACACCCGCACAAAAGATCAATCTGCAGTTCGTTCCTTTCGATTATTGTATCACTTCTTTTAAAAGACACGTAATCCAATACTACATACACTTTATGTCTTCCCTTGATTATCGACTGTCCTGCTCCACATTCTTTTCCTAGTTTCCTGGTCTTTATTGCATCCATTAAGAAGTGACTCCTCTATTACTCAGAAACCAAAGAGGAGACCAGTAGCATACGGTGGGAGATCTGCAGTGCCAGACAAATCACAGCGATCTAGGAGCATGTCTTTTAGTCCTGAAAGGGTCCGTGTAAGGGGGAGGTCTCCTGCTTTTAATGCATTGGCTGCTAATTTTGAGAACCCCAATGCAAGGAACCTTTCTACGCCACCCCCAATGAATAGAAAGATCTTCCCGAAGTTAATAAGTTCGGATTCAGCAAAATTGTCTGTTGCAAAATCTTCAACATTGGCAGCCCTTAGTGCTAGTTTTGAAAGACCACCACCAGCTCGAGAAGCTATCATACCGCGTTCTATAAAAGGTAGGCTTCGACTTTTAACTGTGTGGAGACTATTTTCATGCCATTTGTAACTGACATAAAACCTTATATTGTGGTGAAGTGACTCCAGAGCCTACCAAGCCTAAACCAGAGACTAGTAATAATGATAAGGAGATTAAGGATAAGGAGAAGGAGAACAACTCAGTCCCAGTCAGAATCGAAACTCTCACCATACAAGAAGATGTGAAAGAAGGCGAGGCCGAAGATGATGAAGGCCTCACAATATATCCATACGAGCGTCTAAAAACTACGTCAGCCGACCCTATTTCAGACATTGATGTGACAAAACGAGAGGTAATACTAAAACAGTCATGTTTCAAGTTGAATCTATATATAGATTCTTGACATGATTTTTTCTGAGATGTTTAATTTTGCAACTCTGCAGACATACCTTTCATCAGAAGAATTCAGGGAGAAGTTTGGAATGACTAAAGACGCCTTCTATAAGTTGCCAAAATGGAAACAGAATAAGCATAAAATGGCCCTTCAACTATTCTAACTGTTCTTATATGGTTTCCTTTGATCATTTCACTCAGTTTCCTGCAGTTATATATTACCAGTGGAAGAAGCTTGGCTTTCAAATCCATATGTTGTTAGATTAGATCTAAGGAGCCTCCTGAACGGATTGAACTCAACTGGTAAGGAGTGGAAGGGACAGCTTCAGTGCATTTTTAGCTGCTTCTGTTGCCCAGAGACTTGTGTTCATGATTGATGGACGAAACTCGAGTTTTGTTTTTTTCGCCTGCAGTTGATTGCAAACATCTTTAATTTTTTTTCTGCTCTTTATTAAGCATTTGGTGTTCATTTTTATGTTAAAAGCTATGTTGTGAGCTTGCATTTTGTTTCTATTTTTGAACATATGTTTAGTTTTCAGTTTTATTTTTTCATTCAATTTTTTTCAGGAGAGCAATTAGGTGGCCTGCAATTTATTTTTCTTTGATTTGCATTTCTTGAGGAAGAACAACTGTGTGTACAGCAGAGTGTAATATTTTAGATGACAATAAACTTATAAAAGTGTGATTTTTCTTA

mRNA sequence

ATGATTACGCCGATGTGCAGGGAATTTGAAGTTTTGCAGGTGGTGGAGGTACATAACTTTGATCAAGATGATCTGATGACTGAAGACATGTACATTCTGGATAATCACTCAGAGATATTTGTATGGGTTGGCCAACAAGTCGACTCTAGGAGTAGACTACAAGCTTTAACTATTGGTGAGAAATTCCTTGAACATGATTTTCTGTTGGAAAGTCTATCTTCTAAAGCTCCAGTGTATATTATCACGGAAGGAAGTGAACCTCCATTCTTCACACGCTTCTTCACATGGGACTCTGCAAAATCTTCAATGCATGGAAACTCGTTTCAAAGGAAACTTACAATAGTCAAAAGCGGTGGCACTCCTACTGTAGATGTAAGAAGTGACTCCTCTATTACTCAGAAACCAAAGAGGAGACCAGTAGCATACGGTGGGAGATCTGCAGTGCCAGACAAATCACAGCGATCTAGGAGCATGTCTTTTAGTCCTGAAAGGGTCCGTGTAAGGGGGAGGTCTCCTGCTTTTAATGCATTGGCTGCTAATTTTGAGAACCCCAATGCAAGGAACCTTTCTACGCCACCCCCAATGAATAGAAAGATCTTCCCGAAGTTAATAAGTTCGGATTCAGCAAAATTGTCTGTTGCAAAATCTTCAACATTGGCAGCCCTTAGTGCTAGTTTTGAAAGACCACCACCAGCTCGAGAAGCTATCATACCGCGTTCTATAAAAGTGACTCCAGAGCCTACCAAGCCTAAACCAGAGACTAGTAATAATGATAAGGAGATTAAGGATAAGGAGAAGGAGAACAACTCAGTCCCAGTCAGAATCGAAACTCTCACCATACAAGAAGATGTGAAAGAAGGCGAGGCCGAAGATGATGAAGGCCTCACAATATATCCATACGAGCGTCTAAAAACTACGTCAGCCGACCCTATTTCAGACATTGATGTGACAAAACGAGAGACATACCTTTCATCAGAAGAATTCAGGGAGAAGTTTGGAATGACTAAAGACGCCTTCTATAAGTTGCCAAAATGGAAACAGAATAAGCATAAAATGGCCCTTCAACTATTCTAACTGTTCTTATATGGTTTCCTTTGATCATTTCACTCAGTTTCCTGCAGTTATATATTACCAGTGGAAGAAGCTTGGCTTTCAAATCCATATGTTGTTAGATTAGATCTAAGGAGCCTCCTGAACGGATTGAACTCAACTGGTAAGGAGTGGAAGGGACAGCTTCAGTGCATTTTTAGCTGCTTCTGTTGCCCAGAGACTTGTGTTCATGATTGATGGACGAAACTCGAGTTTTGTTTTTTTCGCCTGCAGTTGATTGCAAACATCTTTAATTTTTTTTCTGCTCTTTATTAAGCATTTGGTGTTCATTTTTATGTTAAAAGCTATGTTGTGAGCTTGCATTTTGTTTCTATTTTTGAACATATGTTTAGTTTTCAGTTTTATTTTTTCATTCAATTTTTTTCAGGAGAGCAATTAGGTGGCCTGCAATTTATTTTTCTTTGATTTGCATTTCTTGAGGAAGAACAACTGTGTGTACAGCAGAGTGTAATATTTTAGATGACAATAAACTTATAAAAGTGTGATTTTTCTTA

Coding sequence (CDS)

ATGATTACGCCGATGTGCAGGGAATTTGAAGTTTTGCAGGTGGTGGAGGTACATAACTTTGATCAAGATGATCTGATGACTGAAGACATGTACATTCTGGATAATCACTCAGAGATATTTGTATGGGTTGGCCAACAAGTCGACTCTAGGAGTAGACTACAAGCTTTAACTATTGGTGAGAAATTCCTTGAACATGATTTTCTGTTGGAAAGTCTATCTTCTAAAGCTCCAGTGTATATTATCACGGAAGGAAGTGAACCTCCATTCTTCACACGCTTCTTCACATGGGACTCTGCAAAATCTTCAATGCATGGAAACTCGTTTCAAAGGAAACTTACAATAGTCAAAAGCGGTGGCACTCCTACTGTAGATGTAAGAAGTGACTCCTCTATTACTCAGAAACCAAAGAGGAGACCAGTAGCATACGGTGGGAGATCTGCAGTGCCAGACAAATCACAGCGATCTAGGAGCATGTCTTTTAGTCCTGAAAGGGTCCGTGTAAGGGGGAGGTCTCCTGCTTTTAATGCATTGGCTGCTAATTTTGAGAACCCCAATGCAAGGAACCTTTCTACGCCACCCCCAATGAATAGAAAGATCTTCCCGAAGTTAATAAGTTCGGATTCAGCAAAATTGTCTGTTGCAAAATCTTCAACATTGGCAGCCCTTAGTGCTAGTTTTGAAAGACCACCACCAGCTCGAGAAGCTATCATACCGCGTTCTATAAAAGTGACTCCAGAGCCTACCAAGCCTAAACCAGAGACTAGTAATAATGATAAGGAGATTAAGGATAAGGAGAAGGAGAACAACTCAGTCCCAGTCAGAATCGAAACTCTCACCATACAAGAAGATGTGAAAGAAGGCGAGGCCGAAGATGATGAAGGCCTCACAATATATCCATACGAGCGTCTAAAAACTACGTCAGCCGACCCTATTTCAGACATTGATGTGACAAAACGAGAGACATACCTTTCATCAGAAGAATTCAGGGAGAAGTTTGGAATGACTAAAGACGCCTTCTATAAGTTGCCAAAATGGAAACAGAATAAGCATAAAATGGCCCTTCAACTATTCTAA

Protein sequence

MITPMCREFEVLQVVEVHNFDQDDLMTEDMYILDNHSEIFVWVGQQVDSRSRLQALTIGEKFLEHDFLLESLSSKAPVYIITEGSEPPFFTRFFTWDSAKSSMHGNSFQRKLTIVKSGGTPTVDVRSDSSITQKPKRRPVAYGGRSAVPDKSQRSRSMSFSPERVRVRGRSPAFNALAANFENPNARNLSTPPPMNRKIFPKLISSDSAKLSVAKSSTLAALSASFERPPPAREAIIPRSIKVTPEPTKPKPETSNNDKEIKDKEKENNSVPVRIETLTIQEDVKEGEAEDDEGLTIYPYERLKTTSADPISDIDVTKRETYLSSEEFREKFGMTKDAFYKLPKWKQNKHKMALQLF

Homology

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BLAST of CmaCh12G008970 vs. ExPASy Swiss-Prot
Match: O65570 (Villin-4 OS=Arabidopsis thaliana OX=3702 GN=VLN4 PE=1 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 1.2e-117
Identity = 233/354 (65.82%), Postives = 285/354 (80.51%), Query Frame = 0


Query: 10  EVLQVVEVHNFDQDDLMTEDMYILDNHSEIFVWVGQQVDSRSRLQALTIGEKFLEHDFLL 69
           EVL+V E++NF QDDLMTED++I+D HSEIFVWVGQ+V  +++L ALTIGEKF+E D LL
Sbjct: 632 EVLKVTEIYNFTQDDLMTEDIFIIDCHSEIFVWVGQEVVPKNKLLALTIGEKFIEKDSLL 691

Query: 70  ESLSSKAPVYIITEGSEPPFFTRFFT-WDSAKSSMHGNSFQRKLTIVKSGGTPTVDVRSD 129
           E LS +AP+Y+I EG EP FFTRFFT WDS+KS+MHGNSFQRKL IVK+GGTP  D    
Sbjct: 692 EKLSPEAPIYVIMEGGEPSFFTRFFTSWDSSKSAMHGNSFQRKLKIVKNGGTPVAD---- 751

Query: 130 SSITQKPKRR-PVAYGGRSAVPDKS-QRSRSMSFSPERVRVRGRSPAFNALAANFENPNA 189
                KPKRR P +YGGR++VPDKS QRSRSMSFSP+RVRVRGRSPAFNALAA FE+ NA
Sbjct: 752 -----KPKRRTPASYGGRASVPDKSQQRSRSMSFSPDRVRVRGRSPAFNALAATFESQNA 811

Query: 190 RNLSTPPPMNRKIFPKLISSDSAKLSVA-KSSTLAALSASFERPPPAREAIIPRSIKVTP 249
           RNLSTPPP+ RK++P+ ++ DS+K + A KSS +A+ SA FE+ PP +E  IP+ +K +P
Sbjct: 812 RNLSTPPPVVRKLYPRSVTPDSSKFAPAPKSSAIASRSALFEKIPP-QEPSIPKPVKASP 871

Query: 250 E-PTKPKPET-SNNDKEIKDKEKENNSVPVRIETLTIQEDVKEGEAEDDEGLTIYPYERL 309
           + P  P PE+ S   +E K+ +KE  S+  RIE+LTIQED KEG  ED+E L  +PY+RL
Sbjct: 872 KTPESPAPESNSKEQEEKKENDKEEGSMSSRIESLTIQEDAKEG-VEDEEDLPAHPYDRL 931

Query: 310 KTTSADPISDIDVTKRETYLSSEEFREKFGMTKDAFYKLPKWKQNKHKMALQLF 358
           KTTS DP+SDIDVT+RE YLSSEEF+EKFGMTK+AFYKLPKWKQNK KMA+QLF
Sbjct: 932 KTTSTDPVSDIDVTRREAYLSSEEFKEKFGMTKEAFYKLPKWKQNKFKMAVQLF 974

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BLAST of CmaCh12G008970 vs. ExPASy Swiss-Prot
Match: Q67U26 (Villin-3 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN3 PE=2 SV=2)

HSP 1 Score: 406.4 bits (1043), Expect = 3.4e-112
Identity = 221/350 (63.14%), Postives = 274/350 (78.29%), Query Frame = 0


Query: 11  VLQVVEVHNFDQDDLMTEDMYILDNHSEIFVWVGQQVDSRSRLQALTIGEKFLEHDFLLE 70
           VL+V E+ NF QDDLMTED++ILD HS +FVWVGQ+VD++ R QAL++GEKFLE D L+E
Sbjct: 635 VLKVREIFNFTQDDLMTEDVFILDCHSCVFVWVGQRVDTKMRAQALSVGEKFLELDILME 694

Query: 71  SLSSKAPVYIITEGSEPPFFTRFFTWDSAKSSMHGNSFQRKLTIVKSGGTPTVDVRSDSS 130
           + S + PVY+ITEGSEP FFTRFFTWDSAKS+MHGNSF+R+L+IVK G  P +D      
Sbjct: 695 NSSQETPVYVITEGSEPQFFTRFFTWDSAKSAMHGNSFERRLSIVKDGVKPKLD------ 754

Query: 131 ITQKPKRRPV---AYGGRSAVPDKSQRSRSMSFSPERVRVRGRSPAFNALAANFENPNAR 190
              KPKRRP    ++ GRS+VP+KSQRSRSMSFSP+RVRVRGRSPAFNALAANFENPNAR
Sbjct: 755 ---KPKRRPTTSSSHTGRSSVPEKSQRSRSMSFSPDRVRVRGRSPAFNALAANFENPNAR 814

Query: 191 NLSTPPPMNRKIFPKLISSDSAKLSVAKSSTLAALSASFERPPPAREAIIPRSIKVTPEP 250
           NLSTPPP  RK  PK  SSD  K    +++++AA+SASFERP P    +IP+SIK +P+ 
Sbjct: 815 NLSTPPPAIRKPSPKSPSSDPTK-PPQRAASIAAISASFERPRP---TLIPKSIKASPDV 874

Query: 251 TKPKPETSNNDKEIKDKEKENNSVPVRIETLTIQEDVKEGEAEDDEGLTIYPYERLKTTS 310
            KP+ E S    E   K+   +     + T TIQED+KEG+ E++EGL +YPYERL+T+S
Sbjct: 875 NKPQVEASKPKPEANGKDSTPSKDSPTV-TPTIQEDLKEGQPENEEGLPVYPYERLRTSS 934

Query: 311 ADPISDIDVTKRETYLSSEEFREKFGMTKDAFYKLPKWKQNKHKMALQLF 358
            +P++DIDVTKRETYLS+ EFRE+FGMTK+AF KLPKWKQN+ K+ALQLF
Sbjct: 935 INPVTDIDVTKRETYLSAAEFRERFGMTKEAFAKLPKWKQNRLKIALQLF 970

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BLAST of CmaCh12G008970 vs. ExPASy Swiss-Prot
Match: Q0J716 (Villin-5 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN5 PE=3 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.4e-110
Identity = 215/346 (62.14%), Postives = 269/346 (77.75%), Query Frame = 0


Query: 12  LQVVEVHNFDQDDLMTEDMYILDNHSEIFVWVGQQVDSRSRLQALTIGEKFLEHDFLLES 71
           L++ E+++F QDDLMTED++ILD HS+IFVWVGQQVD + RLQAL IGEKF++ DFL+E+
Sbjct: 637 LKIKEIYHFTQDDLMTEDVFILDCHSDIFVWVGQQVDVKVRLQALDIGEKFVKLDFLMEN 696

Query: 72  LSSKAPVYIITEGSEPPFFTRFFTWDSAKSSMHGNSFQRKLTIVKSGGTPTVDVRSDSSI 131
           LSS  P+++I EGSEP FFTRFFTWDSAKS MHGNS+QRKL+IVK GG+P +D       
Sbjct: 697 LSSDTPIFVIMEGSEPTFFTRFFTWDSAKSLMHGNSYQRKLSIVKGGGSPALD------- 756

Query: 132 TQKPKRRPVAYGGRSAVPDKSQRSRSMSFSPERVRVRGRSPAFNALAANFENPNARNLST 191
             KPKRR   Y GRS V DKSQRSRSMSFSPERVRVRGRSPAF ALAANFE+ N+RNLST
Sbjct: 757 --KPKRRTPTYSGRSTVQDKSQRSRSMSFSPERVRVRGRSPAFTALAANFESANSRNLST 816

Query: 192 PPPMNRKIFPKLISSDSAKLSVAKSSTLAALSASFERPPPAREAIIPRSIKVTPEPTKPK 251
           PPP+ +K++PK  + DS+  + +KSS  A+L+ SF+R         P+S+K   E  KPK
Sbjct: 817 PPPVVKKLYPKSATPDSSS-APSKSSATASLTGSFDR---------PKSVKDGSELEKPK 876

Query: 252 PETSNNDKEIKDKEKENNSVPVRIETLTIQEDVKEGEAEDDEGLTIYPYERLKTTSADPI 311
            E        +D ++  N++  R+E+LTI EDVKE E EDDEGL +YPY+RL TT+ADP+
Sbjct: 877 QE--------EDAKEGINTMTSRVESLTINEDVKENEPEDDEGLPVYPYDRLITTAADPV 936

Query: 312 SDIDVTKRETYLSSEEFREKFGMTKDAFYKLPKWKQNKHKMALQLF 358
           ++IDVT+RETYLSS EF++KFGMTK+AF KLPKWKQN+ K+ALQLF
Sbjct: 937 TEIDVTRRETYLSSAEFKDKFGMTKEAFSKLPKWKQNRMKIALQLF 955

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BLAST of CmaCh12G008970 vs. ExPASy Swiss-Prot
Match: Q9LVC6 (Villin-5 OS=Arabidopsis thaliana OX=3702 GN=VLN5 PE=2 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 3.7e-98
Identity = 200/353 (56.66%), Postives = 245/353 (69.41%), Query Frame = 0


Query: 10  EVLQVVEVHNFDQDDLMTEDMYILDNHSEIFVWVGQQVDSRSRLQALTIGEKFLEHDFLL 69
           E L+  E+ NF QDDLMTED++ILD H+E+FVWVGQQVD + + QAL IGE FL+HDFLL
Sbjct: 634 ESLKATEIFNFTQDDLMTEDIFILDCHTEVFVWVGQQVDPKKKPQALDIGENFLKHDFLL 693

Query: 70  ESLSSKAPVYIITEGSEPPFFTRFFTWDSAKSSMHGNSFQRKLTIVKSGGTPTVDVRSDS 129
           E+L+S+ P+YI+TEG+EPPFFTRFFTWDS+KS MHG+SFQRKL I+ + G P +D     
Sbjct: 694 ENLASETPIYIVTEGNEPPFFTRFFTWDSSKSGMHGDSFQRKLAILTNKGKPLLD----- 753

Query: 130 SITQKPKRRPVAYGGRSAVPDKSQ-RSRSMSFSPERVRVRGRSPAFNALAANFENPNARN 189
               KPKRR  AY  RS VPDKSQ RSRSM+FSP+R RVRGRSPAFNALAANFE  N RN
Sbjct: 754 ----KPKRRVPAYSSRSTVPDKSQPRSRSMTFSPDRARVRGRSPAFNALAANFEKLNIRN 813

Query: 190 LSTPP----PMNRKIFPKLISSDSAKLSVAKSSTLAALSASFERPPPAREAIIPRSIKVT 249
            STPP    PM RK++PK  + D +K  +A  S +AA +A FE+P P  +          
Sbjct: 814 QSTPPPMVSPMVRKLYPKSHAPDLSK--IAPKSAIAARTALFEKPTPTSQ---------- 873

Query: 250 PEPTKPKPETSNNDKEIKDKEKENNSVPVRIETLTIQEDVKEGEAEDDEGLTIYPYERLK 309
             PT P    + N  E      E N         +I ED KE EAE++  L  +PYERLK
Sbjct: 874 EPPTSPSSSEATNQAEAPKSTSETNEEEA---MSSINEDSKEEEAEEESSLPTFPYERLK 933

Query: 310 TTSADPISDIDVTKRETYLSSEEFREKFGMTKDAFYKLPKWKQNKHKMALQLF 358
           T S DP+SD+D+T+RE YL+S EF+EKF MTK+ FYKLPKWKQNK KM++ LF
Sbjct: 934 TDSEDPVSDVDLTRREAYLTSVEFKEKFEMTKNEFYKLPKWKQNKLKMSVNLF 962

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BLAST of CmaCh12G008970 vs. ExPASy Swiss-Prot
Match: B8ATT7 (Villin-4 OS=Oryza sativa subsp. indica OX=39946 GN=VLN4 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.2e-93
Identity = 195/349 (55.87%), Postives = 243/349 (69.63%), Query Frame = 0


Query: 10  EVLQVVEVHNFDQDDLMTEDMYILDNHSEIFVWVGQQVDSRSRLQALTIGEKFLEHDFLL 69
           E L+V E+H+F QDDLM ED+++LD  +++FVWVGQ+VD++ R QA+ IGEKFL HDFL+
Sbjct: 635 ENLKVKEIHHFTQDDLMAEDIFVLDCRTDLFVWVGQEVDAKLRSQAMDIGEKFLLHDFLM 694

Query: 70  ESLSSKAPVYIITEGSEPPFFTRFFTWDSAKSSMHGNSFQRKLTIVKSGGTPTVDVRSDS 129
           E+LS   P++I+TEGSEP FFTRFFTWDSAKS MHG+S+QRKL IVK G TP++D     
Sbjct: 695 ENLSQDTPIFIVTEGSEPQFFTRFFTWDSAKSLMHGSSYQRKLAIVKGGATPSLD----- 754

Query: 130 SITQKPKRRPVAYGGRSAVPDKS-QRSRSMSFSPERVRVRGRSPAFNALAANFENPNARN 189
               KPKRR  A+ GR+A  DKS QR+RSMS SPER R+RGRSPAF A+A+ FENP+ R 
Sbjct: 755 ----KPKRRTPAFSGRNAGQDKSQQRTRSMSHSPERHRIRGRSPAFTAIASAFENPSTRY 814

Query: 190 LSTPPPMNRKIFPKLISSDSAKLSVAKSSTLAALSASFERPPPAREAIIPRSIKVTPEPT 249
           LSTPPP  +K+FP+   S+  K S +K S + AL+++FE P    ++ IP+S+KV+PE  
Sbjct: 815 LSTPPPAVKKLFPRSGGSELPKTS-SKQSAINALTSAFEGP---TKSTIPKSVKVSPEAE 874

Query: 250 KPKPETSNNDKEIKDKEKENNSVPVRIETLTIQEDVKEGEAEDDEGLTIYPYERLKTTSA 309
           K                       ++ E  TI E   E E EDDE  TIYPYERL TTS 
Sbjct: 875 K----------------------AIQEEGSTIGE--SENEPEDDENSTIYPYERLTTTSD 934

Query: 310 DPISDIDVTKRETYLSSEEFREKFGMTKDAFYKLPKWKQNKHKMALQLF 358
           DP  DIDVTKRE YLSS EF EKFGMT+ +F  LPKWKQN+ K  LQLF
Sbjct: 935 DPAPDIDVTKREVYLSSVEFAEKFGMTRASFKNLPKWKQNRLKSDLQLF 946

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BLAST of CmaCh12G008970 vs. TAIR 10
Match: AT4G30160.1 (villin 4 )

HSP 1 Score: 424.5 bits (1090), Expect = 8.6e-119
Identity = 233/354 (65.82%), Postives = 285/354 (80.51%), Query Frame = 0


Query: 10  EVLQVVEVHNFDQDDLMTEDMYILDNHSEIFVWVGQQVDSRSRLQALTIGEKFLEHDFLL 69
           EVL+V E++NF QDDLMTED++I+D HSEIFVWVGQ+V  +++L ALTIGEKF+E D LL
Sbjct: 632 EVLKVTEIYNFTQDDLMTEDIFIIDCHSEIFVWVGQEVVPKNKLLALTIGEKFIEKDSLL 691

Query: 70  ESLSSKAPVYIITEGSEPPFFTRFFT-WDSAKSSMHGNSFQRKLTIVKSGGTPTVDVRSD 129
           E LS +AP+Y+I EG EP FFTRFFT WDS+KS+MHGNSFQRKL IVK+GGTP  D    
Sbjct: 692 EKLSPEAPIYVIMEGGEPSFFTRFFTSWDSSKSAMHGNSFQRKLKIVKNGGTPVAD---- 751

Query: 130 SSITQKPKRR-PVAYGGRSAVPDKS-QRSRSMSFSPERVRVRGRSPAFNALAANFENPNA 189
                KPKRR P +YGGR++VPDKS QRSRSMSFSP+RVRVRGRSPAFNALAA FE+ NA
Sbjct: 752 -----KPKRRTPASYGGRASVPDKSQQRSRSMSFSPDRVRVRGRSPAFNALAATFESQNA 811

Query: 190 RNLSTPPPMNRKIFPKLISSDSAKLSVA-KSSTLAALSASFERPPPAREAIIPRSIKVTP 249
           RNLSTPPP+ RK++P+ ++ DS+K + A KSS +A+ SA FE+ PP +E  IP+ +K +P
Sbjct: 812 RNLSTPPPVVRKLYPRSVTPDSSKFAPAPKSSAIASRSALFEKIPP-QEPSIPKPVKASP 871

Query: 250 E-PTKPKPET-SNNDKEIKDKEKENNSVPVRIETLTIQEDVKEGEAEDDEGLTIYPYERL 309
           + P  P PE+ S   +E K+ +KE  S+  RIE+LTIQED KEG  ED+E L  +PY+RL
Sbjct: 872 KTPESPAPESNSKEQEEKKENDKEEGSMSSRIESLTIQEDAKEG-VEDEEDLPAHPYDRL 931

Query: 310 KTTSADPISDIDVTKRETYLSSEEFREKFGMTKDAFYKLPKWKQNKHKMALQLF 358
           KTTS DP+SDIDVT+RE YLSSEEF+EKFGMTK+AFYKLPKWKQNK KMA+QLF
Sbjct: 932 KTTSTDPVSDIDVTRREAYLSSEEFKEKFGMTKEAFYKLPKWKQNKFKMAVQLF 974

[Close]

BLAST of CmaCh12G008970 vs. TAIR 10
Match: AT4G30160.2 (villin 4 )

HSP 1 Score: 419.5 bits (1077), Expect = 2.8e-117
Identity = 230/350 (65.71%), Postives = 281/350 (80.29%), Query Frame = 0


Query: 14  VVEVHNFDQDDLMTEDMYILDNHSEIFVWVGQQVDSRSRLQALTIGEKFLEHDFLLESLS 73
           V E++NF QDDLMTED++I+D HSEIFVWVGQ+V  +++L ALTIGEKF+E D LLE LS
Sbjct: 645 VTEIYNFTQDDLMTEDIFIIDCHSEIFVWVGQEVVPKNKLLALTIGEKFIEKDSLLEKLS 704

Query: 74  SKAPVYIITEGSEPPFFTRFFT-WDSAKSSMHGNSFQRKLTIVKSGGTPTVDVRSDSSIT 133
            +AP+Y+I EG EP FFTRFFT WDS+KS+MHGNSFQRKL IVK+GGTP  D        
Sbjct: 705 PEAPIYVIMEGGEPSFFTRFFTSWDSSKSAMHGNSFQRKLKIVKNGGTPVAD-------- 764

Query: 134 QKPKRR-PVAYGGRSAVPDKS-QRSRSMSFSPERVRVRGRSPAFNALAANFENPNARNLS 193
            KPKRR P +YGGR++VPDKS QRSRSMSFSP+RVRVRGRSPAFNALAA FE+ NARNLS
Sbjct: 765 -KPKRRTPASYGGRASVPDKSQQRSRSMSFSPDRVRVRGRSPAFNALAATFESQNARNLS 824

Query: 194 TPPPMNRKIFPKLISSDSAKLSVA-KSSTLAALSASFERPPPAREAIIPRSIKVTPE-PT 253
           TPPP+ RK++P+ ++ DS+K + A KSS +A+ SA FE+ PP +E  IP+ +K +P+ P 
Sbjct: 825 TPPPVVRKLYPRSVTPDSSKFAPAPKSSAIASRSALFEKIPP-QEPSIPKPVKASPKTPE 884

Query: 254 KPKPET-SNNDKEIKDKEKENNSVPVRIETLTIQEDVKEGEAEDDEGLTIYPYERLKTTS 313
            P PE+ S   +E K+ +KE  S+  RIE+LTIQED KEG  ED+E L  +PY+RLKTTS
Sbjct: 885 SPAPESNSKEQEEKKENDKEEGSMSSRIESLTIQEDAKEG-VEDEEDLPAHPYDRLKTTS 944

Query: 314 ADPISDIDVTKRETYLSSEEFREKFGMTKDAFYKLPKWKQNKHKMALQLF 358
            DP+SDIDVT+RE YLSSEEF+EKFGMTK+AFYKLPKWKQNK KMA+QLF
Sbjct: 945 TDPVSDIDVTRREAYLSSEEFKEKFGMTKEAFYKLPKWKQNKFKMAVQLF 983

[Close]

BLAST of CmaCh12G008970 vs. TAIR 10
Match: AT5G57320.1 (villin, putative )

HSP 1 Score: 359.8 bits (922), Expect = 2.6e-99
Identity = 200/353 (56.66%), Postives = 245/353 (69.41%), Query Frame = 0


Query: 10  EVLQVVEVHNFDQDDLMTEDMYILDNHSEIFVWVGQQVDSRSRLQALTIGEKFLEHDFLL 69
           E L+  E+ NF QDDLMTED++ILD H+E+FVWVGQQVD + + QAL IGE FL+HDFLL
Sbjct: 634 ESLKATEIFNFTQDDLMTEDIFILDCHTEVFVWVGQQVDPKKKPQALDIGENFLKHDFLL 693

Query: 70  ESLSSKAPVYIITEGSEPPFFTRFFTWDSAKSSMHGNSFQRKLTIVKSGGTPTVDVRSDS 129
           E+L+S+ P+YI+TEG+EPPFFTRFFTWDS+KS MHG+SFQRKL I+ + G P +D     
Sbjct: 694 ENLASETPIYIVTEGNEPPFFTRFFTWDSSKSGMHGDSFQRKLAILTNKGKPLLD----- 753

Query: 130 SITQKPKRRPVAYGGRSAVPDKSQ-RSRSMSFSPERVRVRGRSPAFNALAANFENPNARN 189
               KPKRR  AY  RS VPDKSQ RSRSM+FSP+R RVRGRSPAFNALAANFE  N RN
Sbjct: 754 ----KPKRRVPAYSSRSTVPDKSQPRSRSMTFSPDRARVRGRSPAFNALAANFEKLNIRN 813

Query: 190 LSTPP----PMNRKIFPKLISSDSAKLSVAKSSTLAALSASFERPPPAREAIIPRSIKVT 249
            STPP    PM RK++PK  + D +K  +A  S +AA +A FE+P P  +          
Sbjct: 814 QSTPPPMVSPMVRKLYPKSHAPDLSK--IAPKSAIAARTALFEKPTPTSQ---------- 873

Query: 250 PEPTKPKPETSNNDKEIKDKEKENNSVPVRIETLTIQEDVKEGEAEDDEGLTIYPYERLK 309
             PT P    + N  E      E N         +I ED KE EAE++  L  +PYERLK
Sbjct: 874 EPPTSPSSSEATNQAEAPKSTSETNEEEA---MSSINEDSKEEEAEEESSLPTFPYERLK 933

Query: 310 TTSADPISDIDVTKRETYLSSEEFREKFGMTKDAFYKLPKWKQNKHKMALQLF 358
           T S DP+SD+D+T+RE YL+S EF+EKF MTK+ FYKLPKWKQNK KM++ LF
Sbjct: 934 TDSEDPVSDVDLTRREAYLTSVEFKEKFEMTKNEFYKLPKWKQNKLKMSVNLF 962

[Close]

BLAST of CmaCh12G008970 vs. TAIR 10
Match: AT2G29890.3 (villin-like 1 )

HSP 1 Score: 183.7 bits (465), Expect = 2.5e-46
Identity = 128/356 (35.96%), Postives = 186/356 (52.25%), Query Frame = 0


Query: 10  EVLQVVEVHNFDQDDLMTEDMYILDNHSEIFVWVGQQVDSRSRLQALTIGEKFLEHDFLL 69
           +VL+V E++NF QDDL TED+++LD  SE++VW+G   + +S+ +ALT+G KFLE D L 
Sbjct: 631 DVLKVKEIYNFVQDDLTTEDVFLLDCQSEVYVWIGSNSNIKSKEEALTLGLKFLEMDILE 690

Query: 70  ESLSSKAPVYIITEGSEPPFFTRFFTWDSAKSSMHGNSFQRKLTIVKSGGTPTVDVRSDS 129
           E L+ + PVY++TEG EPPFFTRFF W   K++MHGNSF+RKL  +K   T T       
Sbjct: 691 EGLTMRTPVYVVTEGHEPPFFTRFFEWVPEKANMHGNSFERKLASLKGKKTST------- 750

Query: 130 SITQKPKRRPVAYGGRSAVPDKSQR---SRSMSFSPERVRVRGRSPAFNALAANFEN-PN 189
                  +R      RS   D + R   SRS+S +      RG SP  +    +  +  +
Sbjct: 751 -------KRSSGSQYRSQSKDNASRDLQSRSVSSNGSE---RGVSPCSSEKLLSLSSAED 810

Query: 190 ARNLSTPPPMNRKIFPK--LISSDSAKLSVAKSST--LAALSASFERPPPAREAIIPRSI 249
             N S   P+ +K+F +  L+  +  K+S     T  L  ++  +++    +E+     I
Sbjct: 811 MTNSSNSTPVVKKLFSESLLVDPNDGKVSYVNLFTERLGYMTHKYQKRVARQESSSKSDI 870

Query: 250 KVTPEPTKPKPETSNNDKEIKDKEKENNSVPVRIETLTIQEDVKEGEAEDDEGLTIYPYE 309
                 +K KP                           I  D+   E+        Y YE
Sbjct: 871 ------SKQKPRVG------------------------INSDLSSLES------LAYSYE 930

Query: 310 RLKTTSADPISDIDVTKRETYLSSEEFREKFGMTKDAFYKLPKWKQNKHKMALQLF 358
           +L+  S  P++DID T+RE YL+ +EF E+FGM K  FY LPKWKQNK K++L LF
Sbjct: 931 QLRVDSQKPVTDIDATRREAYLTEKEFEERFGMAKSEFYALPKWKQNKLKISLHLF 933

[Close]

BLAST of CmaCh12G008970 vs. TAIR 10
Match: AT3G57410.1 (villin 3 )

HSP 1 Score: 180.3 bits (456), Expect = 2.8e-45
Identity = 127/352 (36.08%), Postives = 190/352 (53.98%), Query Frame = 0


Query: 13  QVVEVHNFDQDDLMTEDMYILDNHSEIFVWVGQQVDSRSRLQALTIGEKFLEHDFLLESL 72
           QV E+HNFDQDDL+TE+M++LD H+E+FVWVGQ VD + +  A  IG++++     LE L
Sbjct: 636 QVEEIHNFDQDDLLTEEMHLLDTHAEVFVWVGQCVDPKEKQTAFEIGQRYINLAGSLEGL 695

Query: 73  SSKAPVYIITEGSEPPFFTRFFTWDSAKSSMHGNSFQRKLTIVKSGGTPTVDVRSDSSIT 132
           S K P+Y ITEG+EP FFT +F+WDS K+++ GNS+Q+K  ++   GT  V     SS  
Sbjct: 696 SPKVPLYKITEGNEPCFFTTYFSWDSTKATVQGNSYQKKAALLL--GTHHVVEDQSSSGN 755

Query: 133 QKPKRRPVAYGGRSAVPDKSQRSRSMSFSPERVRVRG-------RSPAFNALAANFENPN 192
           Q P++R  A    +A+      S   + SP R R  G       R+ A  AL + F   N
Sbjct: 756 QGPRQRAAAL---AALTSAFNSSSGRTSSPSRDRSNGSQGGPRQRAEALAALTSAF---N 815

Query: 193 ARNLSTPPPMNRKIFPKLISSDSAKLSVAKSSTLAALSASFERPPPAREAIIPRSIKVTP 252
           +   S  PP         ++S +++ + A ++    L+A  ++ P         S +   
Sbjct: 816 SSPSSKSPPRRSG-----LTSQASQRAAAVAALSQVLTAEKKKSPDTSP-----SAEAKD 875

Query: 253 EPTKPKPETSNNDKEIKDKEKENNSVPVRIETLTIQEDVKEGEAEDDEGLTIYPYERLKT 312
           E    + E +    E K++E+ + +     E    ++D  E E     G+T + YERL+ 
Sbjct: 876 EKAFSEVEATEEATEAKEEEEVSPAAEASAEEAKPKQDDSEVET---TGVT-FTYERLQA 935

Query: 313 TSADPISDIDVTKRETYLSSEEFREKFGMTKDAFYKLPKWKQNKHKMALQLF 358
            S  P++ ID  +RE YLS  EF+  FGM K++FYKLP WKQ+  K    LF
Sbjct: 936 KSEKPVTGIDFKRREAYLSEVEFKTVFGMEKESFYKLPGWKQDLLKKKFNLF 965

The following BLAST results are available for this feature:

BLAST of CmaCh12G008970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65570	1.2e-117	65.82	Villin-4 OS=Arabidopsis thaliana OX=3702 GN=VLN4 PE=1 SV=1	[more]
Q67U26	3.4e-112	63.14	Villin-3 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN3 PE=2 SV=2	[more]
Q0J716	1.4e-110	62.14	Villin-5 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN5 PE=3 SV=1	[more]
Q9LVC6	3.7e-98	56.66	Villin-5 OS=Arabidopsis thaliana OX=3702 GN=VLN5 PE=2 SV=1	[more]
B8ATT7	1.2e-93	55.87	Villin-4 OS=Oryza sativa subsp. indica OX=39946 GN=VLN4 PE=3 SV=1	[more]

BLAST of CmaCh12G008970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30160.1	8.6e-119	65.82	villin 4	[more]
AT4G30160.2	2.8e-117	65.71	villin 4	[more]
AT5G57320.1	2.6e-99	56.66	villin, putative	[more]
AT2G29890.3	2.5e-46	35.96	villin-like 1	[more]
AT3G57410.1	2.8e-45	36.08	villin 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007122	Villin/Gelsolin	PRINTS	PR00597	GELSOLIN	coord: 22..44 score: 53.75 coord: 51..70 score: 21.36
IPR007122	Villin/Gelsolin	SMART	SM00262	VILL_6	coord: 2..97 e-value: 1.1E-16 score: 71.5
IPR007122	Villin/Gelsolin	PANTHER	PTHR11977	VILLIN	coord: 12..357
IPR003128	Villin headpiece	SMART	SM00153	VHP_1	coord: 322..357 e-value: 8.6E-17 score: 71.8
IPR003128	Villin headpiece	PFAM	PF02209	VHP	coord: 322..357 e-value: 9.8E-15 score: 54.3
IPR003128	Villin headpiece	PROSITE	PS51089	HP	coord: 292..357 score: 20.684547
IPR036886	Villin headpiece domain superfamily	GENE3D	1.10.950.10	Villin headpiece domain	coord: 280..357 e-value: 4.7E-24 score: 86.2
IPR036886	Villin headpiece domain superfamily	SUPERFAMILY	47050	VHP, Villin headpiece domain	coord: 282..357
IPR007123	Gelsolin-like domain	PFAM	PF00626	Gelsolin	coord: 14..90 e-value: 9.9E-10 score: 38.2
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 5..113 e-value: 5.5E-27 score: 96.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..268
None	No IPR available	PANTHER	PTHR11977:SF115	VILLIN-3-LIKE	coord: 12..357
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 11..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G008970.1	CmaCh12G008970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051693	actin filament capping
biological_process	GO:0051014	actin filament severing
biological_process	GO:0007010	cytoskeleton organization
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0003779	actin binding