CmaCh12G008180 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G008180
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	homeobox-leucine zipper protein REVOLUTA-like
Location	Cma_Chr12: 5996218 .. 6001652 (+)
RNA-Seq Expression	CmaCh12G008180
Synteny	CmaCh12G008180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCAGCTGAAGAGGGTCTCTGTTGCTCTTTTGTCCTTTAATGTTTGATGGGTCTGTTTGATTTCGCTGCAGAACTGGTGGGGTTATTTGGCTCCGTGAAGTTGTAGTGGAAAACTTAGGTTGAGATTTATACATTTTTGGGAATACGAAGTGGGTTTTTGGGTAATCTCAGTGGGGGTTTGAATTTGAGGGATTTGGGGATAAAGTGGGAGGCAAGAAGAGGGGAATATTGGGGTTCGTTCTAAAAGTAGCGAGAAATCTGAGTTTTAACTTTTGGAACTTTCTGGGAAATTTTGGAACCACCCCAAAAAGTTACGTGAAACCCATTTTCGAACCTTGAAAATTCAAACGACAGATTTTGTTGGGTTTTTTTTTTTTCTTCACTATCGGTTTGATTTACGTTTTTTGAACTCTGCTTCTTTAAGGTCTTTTGATTTCCTACCTGGCGGAGTTTACCAAGAGACTTTGTTTGTGTTGAGAGTTTGGGGATTTGGGGAAATGGCCATGGCTATGGCTACGGCCCATCACAGAGAGAGTGGCGATGGGGGTATCGATGGCCACCTTGATAGCACCGGGAAGTATGTCCGTTACACGACGGAGCAAGTGGAAGCTCTTGAGCGAGTTTATGCGGAATGTCCTAAACCGAGCTCTTTGCGGCGGCAGCAGCTAGTTCGTGATTGCCCCATTTTGGCTAACATCGAGCCAAAGCAGATCAAAGTCTGGTTCCAGAACCGCAGGTATAAGAACTTTGATGGGGTTTTTTTTTTTCTTCTTTTGGTTCTTGTTTTGAAATGATTGATTGAGGGTATTATTTGTTTGGGATGATGGAATTTCTTATGGGGTTTGGCTGGTTTGTAGGTGTAGAGAGAAACAGAGGAAAGAGGCTTCTCGTTTACAGTCATTGAATAGTAAATTGACGGCCATGAACAAGCTGTTGATGGAGGAGAACGATAGGTTACAGAAACATGTGTCTCAGCTCATTTGTGAGAATGGGTCTATGCGACAACATTTGCAAACTGCTAACGTATGTATTTCTGTTTGATCATTGTTTTGATTCACTTTGATCGGTGTTTTTGTGAATCATTGTGTTTTAGGAGTTCAATTGTTTTGCAGGCACCAGCAGCACCAGTTACTGATGCAAGCTGTGACACAGTGGCTACTACCCCTCAGCATTCACTTAGAGATGCTAGTAGCCCTGCTGGGTAATTTTAGAGACATGTTCTTATGCTATTTCGTCGTTTAACAACCTTTAAGGTTGATTTTAGTTTATCTAATCTATAACAATCATGGCAGACTCCTGTCTATTGCAGAGGAGATTTTGGCAGCCTTCCTGTCAAAGGCTACAGGAACTGCTATCGATTGGGTCCAGTTGCCTGGGATGAAGGTTCTAAATTCATTCCTTCGTTAGCTCATCCTTTGCTTAATATGAATTCTAATCTGGGTTTGTATCGTCCAGCCTGGTCCGGATTCGGTGGGAATCTTCGCCGTTTCACAGAGTTGCAGTGGAGTAGCGGCTCGTGCCTGTGGTCTTGTCAGTTTAGAGCCCATGAAGGCAAGAATGCTCATACTATTGATCTAGCAACATGTATATTATGGTCGTAAATGGGGTGAACTTTTATTTGTTGTTCACTATCATAATGACTTCTGCAGATTGACGAGATCCTTAAAGATCGCCCATCTTGGTTTCGTAATTGCCGGAGCGTTGAAGTCTTTACAATGTTTCCCACTGGTAATGGTGGGACGATCGAACTTGTTTATACGCAGGTGAACTTTGATATGGACATCTATTACAGTTTTGCTGTTCAGTAGTTAATGACATTTTGAGAGGGAACTAATGATGGTTGAATTACTTTAGGTTTACGCTCCGACTACGCTAGCACCTGCACGAGATTTTTGGACTCTAAGATACACGAAAACTTTGGAAAATGGAAATCTTGCGGTAAAAGCGCCTCCGACTCTGCAATGTTCATTATATTTTAACATTGTGTATGCTAACTTCTTTTTTTCTACAGGTTTGTGAGAGATCGCTGTCTGGGTCAGGCGCGGGGCCTAATTCAGCTTCTGCTGCTCAGTTCGTGCGAGCTGAAATGCTTCCCAGTGGTTATTTGATTCGTCCTTGTGATGGCGGAGGTTCAATCATCCACATTGTAGATCACCTAAATCTCGAGGTTTGTCTTTTCAGTTTTCACTTGTAAATACTATTTCAGGAGGCACATTTCTAAATGATTGTATAAATTCAATAGCCTTGGAGCGTGCCAGAGGTCGTGAGACCACTTTACGAATCGTCAAAGGCCGTCGCTCAGAAAATGACTATAGCAGTGAGTAAATTCAGATATGTTTCTGTATTGTTTGGTTTTCGTCTTCTCATCATCGTGTTCGACATTTAGGCTTTTCTCTACGTCAGGCAAGTGGCTCAAGAAACAAGTGGTGAAGTAGTATACAGTTTAGGCAGACAACCGGCCGTTCTTCGAACGTTTAGCCAAAGATTAAGCAGGTAGGTCTGTAAATTTTTACACGATGAACACGTCTTATCGATCTTCCCCGTAGCTTTTAACGATATTTGAACTTTGTTACCTTAATGTAGAGGATTTAATGAGGCTGTTAATGGATTTAATGATGATGGATGGTCTTTGATGAACTATGATGGAGCTGAAGATGTGAGTCTTGCCATAAATTCAAGCAAGAATGTAAATACATCGTATGATCCTGTCAACTCTCTTGCATTCCATGCGGGTGTTCTTTGTGCAAAGGCTTCCATGCTTATACAAGTAATGTTCATAATTATTTCTGAGGTCGATGAAACTTCAGTGGATATCTTGTTATGATTTCAGCTAATTAGATTGTTGATTATGGTTTTCCTTTCAGAATGTTCCTCCAATTGCTTTAATTCGTTTCTTGAGGGAACATCGATCGGAGTGGGCTGATTTCAATGTTGATGCGTATTCCGCTGCGTCGTTGAAAACTGGTTCGTATGTATACCCGGGCATGAGACCGACCAGGTTTACAGGGAGCCAAATCATCATGCCGCTCGGCCATACAATCGAACAAGAAGAGGTATTTATATACAAATTAAACAATTTAGTTTGAATATATTAGGATAATTATGATGTTTGTCTTTGTTCATCCAGTTGCTTGAAGTTGTAAGGCTTGAGAGCCACCCTCTTGCTCAAGAAGATACTTTTATGTCCCGGGATGTTCATCTATTGCAGGTATTGTCTTTCTCCTTTGCATTGATATCATCACCCTTGTGAGATCCCTCTATTGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGATGTGAAAACCTCTCCCTTACCTGACATGTTTTAAAAACTTTGAGTCTTTATAAGGGTGTGAAAACCTCTCCCTAGCTGATATGTTTTAAAAACTTTGAGGAGAAAATCGAAAGGGAAAGTTCAAAGAGGACTATATCTGCTTGCAGTGGGTTTGGGTCGTTATAAATGGTATCAAAGCTAGACATTGGGTGATGTGCCAATGAGGAGGCTAAGTCCCGAAGGGGGTGTACACGAGGCGGTGTGCCAGCAAGGACGCTGGGCTCTGAATGGGGTGGATTGTGAGATCCCACATTGGTTGGGGAGGAGAACAAAGCATTATTTATAAGGATGTGGAAATCTTTCACTAGCAAGCTTTGAGGTGAAGCCCGAAAGAGAAAGCTCAAAGAGAACAATATTTTCTTATGGTGGACTTGGGTCGTTACAGTCCCCTCTATCAGCTGGGCAATCAAATGATATTTTGTTGTGGTTGGATGAATTTATTATTATCTCTCTTCATTTCTCGTGTTGGGCAGATGTGTACTGGAATCGATGAGAATGCAGTTGGAGCGTGTTCCGAACTTGTGTTTGCTCCAATCAATGAGATGTTTCCTGATGATGCTGTATTGCTGCCTTCTGGTTTTAGGATCATCCCTCTACATTCTGAAACAGTTGAGTTCAACGGTTCCTATAATCTAAACATATAAGAATGAAAGATTCAAACTCTCGATCTCTTGGTCGATTATATGTCTTACGAGGACATTTTCCTTGCAAAAAACATTGTAATTGACTCGATATGTCTTTCACATGAGTGAACTTTTAACCAACATGCTTTTGTTTGGTTGAATCATCCAGGGTGACTCAAAACATACATGGAAGAACTTGAATAGCACTATGGATCTCACTTCCAATCTTGAAGTTGGTTCATCTGCTTCACAAGATGCTGCTGCTGCATCAACATCTAACTTCAGATCAGTTTTGACTATTGCCTTCCAGTTCTCGTTTGGTAGCAACCTACAGGATGATGTTGCGGCGATGGCAAGGCAGTACGTTCGGAGTGTCGTTTCAGCTGTGCAGAGGGTTGCAGTTGCCATGTCTCCCTCTGGATTAAGCTTGCCATCGGAACGAAGGCTATCATCTGCTTGTCCAGAAGCTCTTACCCTGGCTCGATGGATCTGCTATAGCTACAGGTTCTCTCTTTCCCAACCTATAAAAGAAAATTATACTTCGAATTCAATGTAATAAACCGTCAAAATAGAAAATTGAGTGTCTATCTCCTTCTGTCACACAGATGCCATACTGGAACAGAATTGGTGCTATCAGACAGTGTGGATGGTGGTGACTCAGTGTTGAAACACCTATGGAATCATCAGGATGCAATTCTCTGTTGTTCCCTCAAGGTAAGAAACAAAAAAGAAAAAGAAAAAGAACATTTTTAACCATGTTATGTGGTTGTCTCCTAAGCAATGCGTTGAATGGCTGCAGTCACTGCCCCCAGTGTTCATGTTTGCAAACCAAGCAGGCCTCGACATGTTGGAGACGACCTTGGTTGCGTTGCAAGACATCACTTTGGATAAGATTCTCGGCGACTCGGCCCATAAGGCCTTCTCTGCTGATTTTTCCAATTTAATGCACCAGGTTACCTACTATATATATTCTCCCATTCAGTTCATTGTCAGCCATGCTTGGTTGTGACTATACTGCATAAATAAAGAAAACTTGAGATGATTAGCTATTACAAGGTCGATTTGCGATATAACAATGCAAACTAACTGAATTTTATTTGTTTATGACCAGGGCTTTGCTTACATACCTGCTGGAATTTGCATATCGACAATGGGGCGCCATGCTTCCTTTGAACAAGCCATTGCATGGAAGGTTCTTGCAGAAGACGAGTCCACCGTGCACTGTCTTGCTTTCTCCTTCGTCAACTGGTCGTTCCTATGATTCTTTTCCCTGTACACTTGTTGAAAATTATGTAACAGTCCAAGAAAATAGGATGGGGGGTTCTACAATTTTGTAACATCTTATCTATACATCAGCCGCAGGTTTGAATTATAAGGATGTATCCGGCAGAGAAAATTTCTGATGATGTCAAATTCTTTTGTTGTGACAAGAATGGAAAATGTTGCATTTCTGGAACTAACTTGCATCGAAT

mRNA sequence

ATGAATCAGCTGAAGAGGTGGGGGTTTGAATTTGAGGGATTTGGGGATAAAGTGGGAGGCAAGAAGAGGGGAATATTGGGGTCTTTTGATTTCCTACCTGGCGGAGTTTACCAAGAGACTTTGTTTGTGTTGAGAGTTTGGGGATTTGGGGAAATGGCCATGGCTATGGCTACGGCCCATCACAGAGAGAGTGGCGATGGGGGTATCGATGGCCACCTTGATAGCACCGGGAAGTATGTCCGTTACACGACGGAGCAAGTGGAAGCTCTTGAGCGAGTTTATGCGGAATGTCCTAAACCGAGCTCTTTGCGGCGGCAGCAGCTAGTTCGTGATTGCCCCATTTTGGCTAACATCGAGCCAAAGCAGATCAAAGTCTGGTTCCAGAACCGCAGGTGTAGAGAGAAACAGAGGAAAGAGGCTTCTCGTTTACAGTCATTGAATAGTAAATTGACGGCCATGAACAAGCTGTTGATGGAGGAGAACGATAGGTTACAGAAACATGTGTCTCAGCTCATTTGTGAGAATGGGTCTATGCGACAACATTTGCAAACTGCTAACGCACCAGCAGCACCAGTTACTGATGCAAGCTGTGACACAGTGGCTACTACCCCTCAGCATTCACTTAGAGATGCTAGTAGCCCTGCTGGACTCCTGTCTATTGCAGAGGAGATTTTGGCAGCCTTCCTGTCAAAGGCTACAGGAACTGCTATCGATTGGGTCCAGTTGCCTGGGATGAAGCCTGGTCCGGATTCGGTGGGAATCTTCGCCGTTTCACAGAGTTGCAGTGGAGTAGCGGCTCGTGCCTGTGGTCTTATTGACGAGATCCTTAAAGATCGCCCATCTTGGTTTCGTAATTGCCGGAGCGTTGAAGTCTTTACAATGTTTCCCACTGGTAATGGTGGGACGATCGAACTTGTTTATACGCAGGTTTACGCTCCGACTACGCTAGCACCTGCACGAGATTTTTGGACTCTAAGATACACGAAAACTTTGGAAAATGGAAATCTTGCGGTTTGTGAGAGATCGCTGTCTGGGTCAGGCGCGGGGCCTAATTCAGCTTCTGCTGCTCAGTTCGTGCGAGCTGAAATGCTTCCCAGTGGTTATTTGATTCGTCCTTGTGATGGCGGAGGTTCAATCATCCACATTGTAGATCACCTAAATCTCGAGCCTTGGAGCGTGCCAGAGGTCGTGAGACCACTTTACGAATCGTCAAAGGCCGTCGCTCAGAAAATGACTATAGCAGCTTTTCTCTACGTCAGGCAAGTGGCTCAAGAAACAAGTGGTGAAGTAGTATACAGTTTAGGCAGACAACCGGCCGTTCTTCGAACGTTTAGCCAAAGATTAAGCAGAGGATTTAATGAGGCTGTTAATGGATTTAATGATGATGGATGGTCTTTGATGAACTATGATGGAGCTGAAGATGTGAGTCTTGCCATAAATTCAAGCAAGAATGTAAATACATCGTATGATCCTGTCAACTCTCTTGCATTCCATGCGGGTGTTCTTTGTGCAAAGGCTTCCATGCTTATACAAAATGTTCCTCCAATTGCTTTAATTCGTTTCTTGAGGGAACATCGATCGGAGTGGGCTGATTTCAATGTTGATGCGTATTCCGCTGCGTCGTTGAAAACTGGTTCGTATGTATACCCGGGCATGAGACCGACCAGGTTTACAGGGAGCCAAATCATCATGCCGCTCGGCCATACAATCGAACAAGAAGAGATGTGTACTGGAATCGATGAGAATGCAGTTGGAGCGTGTTCCGAACTTGTGTTTGCTCCAATCAATGAGATGTTTCCTGATGATGCTGTATTGCTGCCTTCTGGTTTTAGGATCATCCCTCTACATTCTGAAACAGGTGACTCAAAACATACATGGAAGAACTTGAATAGCACTATGGATCTCACTTCCAATCTTGAAGTTGGTTCATCTGCTTCACAAGATGCTGCTGCTGCATCAACATCTAACTTCAGATCAGTTTTGACTATTGCCTTCCAGTTCTCGTTTGGTAGCAACCTACAGGATGATGTTGCGGCGATGGCAAGGCAGTACGTTCGGAGTGTCGTTTCAGCTGTGCAGAGGGTTGCAGTTGCCATGTCTCCCTCTGGATTAAGCTTGCCATCGGAACGAAGGCTATCATCTGCTTGTCCAGAAGCTCTTACCCTGGCTCGATGGATCTGCTATAGCTACAGATGCCATACTGGAACAGAATTGGTGCTATCAGACAGTGTGGATGGTGGTGACTCAGTGTTGAAACACCTATGGAATCATCAGGATGCAATTCTCTGTTGTTCCCTCAAGTCACTGCCCCCAGTGTTCATGTTTGCAAACCAAGCAGGCCTCGACATGTTGGAGACGACCTTGGTTGCGTTGCAAGACATCACTTTGGATAAGATTCTCGGCGACTCGGCCCATAAGGCCTTCTCTGCTGATTTTTCCAATTTAATGCACCAGGGCTTTGCTTACATACCTGCTGGAATTTGCATATCGACAATGGGGCGCCATGCTTCCTTTGAACAAGCCATTGCATGGAAGGTTCTTGCAGAAGACGAGTCCACCGTGCACTGTCTTGCTTTCTCCTTCGTCAACTGGTCGTTCCTATGATTCTTTTCCCTGTACACTTGTTGAAAATTATGTAACAGTCCAAGAAAATAGGATGGGGGGTTCTACAATTTTGTAACATCTTATCTATACATCAGCCGCAGGTTTGAATTATAAGGATGTATCCGGCAGAGAAAATTTCTGATGATGTCAAATTCTTTTGTTGTGACAAGAATGGAAAATGTTGCATTTCTGGAACTAACTTGCATCGAAT

Coding sequence (CDS)

ATGAATCAGCTGAAGAGGTGGGGGTTTGAATTTGAGGGATTTGGGGATAAAGTGGGAGGCAAGAAGAGGGGAATATTGGGGTCTTTTGATTTCCTACCTGGCGGAGTTTACCAAGAGACTTTGTTTGTGTTGAGAGTTTGGGGATTTGGGGAAATGGCCATGGCTATGGCTACGGCCCATCACAGAGAGAGTGGCGATGGGGGTATCGATGGCCACCTTGATAGCACCGGGAAGTATGTCCGTTACACGACGGAGCAAGTGGAAGCTCTTGAGCGAGTTTATGCGGAATGTCCTAAACCGAGCTCTTTGCGGCGGCAGCAGCTAGTTCGTGATTGCCCCATTTTGGCTAACATCGAGCCAAAGCAGATCAAAGTCTGGTTCCAGAACCGCAGGTGTAGAGAGAAACAGAGGAAAGAGGCTTCTCGTTTACAGTCATTGAATAGTAAATTGACGGCCATGAACAAGCTGTTGATGGAGGAGAACGATAGGTTACAGAAACATGTGTCTCAGCTCATTTGTGAGAATGGGTCTATGCGACAACATTTGCAAACTGCTAACGCACCAGCAGCACCAGTTACTGATGCAAGCTGTGACACAGTGGCTACTACCCCTCAGCATTCACTTAGAGATGCTAGTAGCCCTGCTGGACTCCTGTCTATTGCAGAGGAGATTTTGGCAGCCTTCCTGTCAAAGGCTACAGGAACTGCTATCGATTGGGTCCAGTTGCCTGGGATGAAGCCTGGTCCGGATTCGGTGGGAATCTTCGCCGTTTCACAGAGTTGCAGTGGAGTAGCGGCTCGTGCCTGTGGTCTTATTGACGAGATCCTTAAAGATCGCCCATCTTGGTTTCGTAATTGCCGGAGCGTTGAAGTCTTTACAATGTTTCCCACTGGTAATGGTGGGACGATCGAACTTGTTTATACGCAGGTTTACGCTCCGACTACGCTAGCACCTGCACGAGATTTTTGGACTCTAAGATACACGAAAACTTTGGAAAATGGAAATCTTGCGGTTTGTGAGAGATCGCTGTCTGGGTCAGGCGCGGGGCCTAATTCAGCTTCTGCTGCTCAGTTCGTGCGAGCTGAAATGCTTCCCAGTGGTTATTTGATTCGTCCTTGTGATGGCGGAGGTTCAATCATCCACATTGTAGATCACCTAAATCTCGAGCCTTGGAGCGTGCCAGAGGTCGTGAGACCACTTTACGAATCGTCAAAGGCCGTCGCTCAGAAAATGACTATAGCAGCTTTTCTCTACGTCAGGCAAGTGGCTCAAGAAACAAGTGGTGAAGTAGTATACAGTTTAGGCAGACAACCGGCCGTTCTTCGAACGTTTAGCCAAAGATTAAGCAGAGGATTTAATGAGGCTGTTAATGGATTTAATGATGATGGATGGTCTTTGATGAACTATGATGGAGCTGAAGATGTGAGTCTTGCCATAAATTCAAGCAAGAATGTAAATACATCGTATGATCCTGTCAACTCTCTTGCATTCCATGCGGGTGTTCTTTGTGCAAAGGCTTCCATGCTTATACAAAATGTTCCTCCAATTGCTTTAATTCGTTTCTTGAGGGAACATCGATCGGAGTGGGCTGATTTCAATGTTGATGCGTATTCCGCTGCGTCGTTGAAAACTGGTTCGTATGTATACCCGGGCATGAGACCGACCAGGTTTACAGGGAGCCAAATCATCATGCCGCTCGGCCATACAATCGAACAAGAAGAGATGTGTACTGGAATCGATGAGAATGCAGTTGGAGCGTGTTCCGAACTTGTGTTTGCTCCAATCAATGAGATGTTTCCTGATGATGCTGTATTGCTGCCTTCTGGTTTTAGGATCATCCCTCTACATTCTGAAACAGGTGACTCAAAACATACATGGAAGAACTTGAATAGCACTATGGATCTCACTTCCAATCTTGAAGTTGGTTCATCTGCTTCACAAGATGCTGCTGCTGCATCAACATCTAACTTCAGATCAGTTTTGACTATTGCCTTCCAGTTCTCGTTTGGTAGCAACCTACAGGATGATGTTGCGGCGATGGCAAGGCAGTACGTTCGGAGTGTCGTTTCAGCTGTGCAGAGGGTTGCAGTTGCCATGTCTCCCTCTGGATTAAGCTTGCCATCGGAACGAAGGCTATCATCTGCTTGTCCAGAAGCTCTTACCCTGGCTCGATGGATCTGCTATAGCTACAGATGCCATACTGGAACAGAATTGGTGCTATCAGACAGTGTGGATGGTGGTGACTCAGTGTTGAAACACCTATGGAATCATCAGGATGCAATTCTCTGTTGTTCCCTCAAGTCACTGCCCCCAGTGTTCATGTTTGCAAACCAAGCAGGCCTCGACATGTTGGAGACGACCTTGGTTGCGTTGCAAGACATCACTTTGGATAAGATTCTCGGCGACTCGGCCCATAAGGCCTTCTCTGCTGATTTTTCCAATTTAATGCACCAGGGCTTTGCTTACATACCTGCTGGAATTTGCATATCGACAATGGGGCGCCATGCTTCCTTTGAACAAGCCATTGCATGGAAGGTTCTTGCAGAAGACGAGTCCACCGTGCACTGTCTTGCTTTCTCCTTCGTCAACTGGTCGTTCCTATGA

Protein sequence

MNQLKRWGFEFEGFGDKVGGKKRGILGSFDFLPGGVYQETLFVLRVWGFGEMAMAMATAHHRESGDGGIDGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRCREKQRKEASRLQSLNSKLTAMNKLLMEENDRLQKHVSQLICENGSMRQHLQTANAPAAPVTDASCDTVATTPQHSLRDASSPAGLLSIAEEILAAFLSKATGTAIDWVQLPGMKPGPDSVGIFAVSQSCSGVAARACGLIDEILKDRPSWFRNCRSVEVFTMFPTGNGGTIELVYTQVYAPTTLAPARDFWTLRYTKTLENGNLAVCERSLSGSGAGPNSASAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEPWSVPEVVRPLYESSKAVAQKMTIAAFLYVRQVAQETSGEVVYSLGRQPAVLRTFSQRLSRGFNEAVNGFNDDGWSLMNYDGAEDVSLAINSSKNVNTSYDPVNSLAFHAGVLCAKASMLIQNVPPIALIRFLREHRSEWADFNVDAYSAASLKTGSYVYPGMRPTRFTGSQIIMPLGHTIEQEEMCTGIDENAVGACSELVFAPINEMFPDDAVLLPSGFRIIPLHSETGDSKHTWKNLNSTMDLTSNLEVGSSASQDAAAASTSNFRSVLTIAFQFSFGSNLQDDVAAMARQYVRSVVSAVQRVAVAMSPSGLSLPSERRLSSACPEALTLARWICYSYRCHTGTELVLSDSVDGGDSVLKHLWNHQDAILCCSLKSLPPVFMFANQAGLDMLETTLVALQDITLDKILGDSAHKAFSADFSNLMHQGFAYIPAGICISTMGRHASFEQAIAWKVLAEDESTVHCLAFSFVNWSFL

Homology

[Close]

BLAST of CmaCh12G008180 vs. ExPASy Swiss-Prot
Match: Q9SE43 (Homeobox-leucine zipper protein REVOLUTA OS=Arabidopsis thaliana OX=3702 GN=REV PE=1 SV=2)

HSP 1 Score: 1191.0 bits (3080), Expect = 0.0e+00
Identity = 611/852 (71.71%), Postives = 699/852 (82.04%), Query Frame = 0


Query: 54  MAMATAHHRESGDGGIDGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCP 113
           M MA A+HRE     ++ HLDS+GKYVRYT EQVEALERVYAECPKPSSLRRQQL+R+C 
Sbjct: 1   MEMAVANHRERSSDSMNRHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECS 60

Query: 114 ILANIEPKQIKVWFQNRRCREKQRKEASRLQSLNSKLTAMNKLLMEENDRLQKHVSQLIC 173
           ILANIEPKQIKVWFQNRRCR+KQRKEASRLQS+N KL+AMNKLLMEENDRLQK VSQL+C
Sbjct: 61  ILANIEPKQIKVWFQNRRCRDKQRKEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVC 120

Query: 174 ENGSMRQHLQTANAPAAPVTDASCDTVATTPQHSLRDASSPAGLLSIAEEILAAFLSKAT 233
           ENG M+Q L T       V D SC++V TTPQHSLRDA+SPAGLLSIAEE LA FLSKAT
Sbjct: 121 ENGYMKQQLTTV------VNDPSCESVVTTPQHSLRDANSPAGLLSIAEETLAEFLSKAT 180

Query: 234 GTAIDWVQLPGMKPGPDSVGIFAVSQSCSGVAARACGLID-------EILKDRPSWFRNC 293
           GTA+DWVQ+PGMKPGPDSVGIFA+SQ C+GVAARACGL+        EILKDRPSWFR+C
Sbjct: 181 GTAVDWVQMPGMKPGPDSVGIFAISQRCNGVAARACGLVSLEPMKIAEILKDRPSWFRDC 240

Query: 294 RSVEVFTMFPTGNGGTIELVYTQVYAPTTLAPARDFWTLRYTKTLENGNLAVCERSLSGS 353
           RS+EVFTMFP GNGGTIELVY Q YAPTTLAPARDFWTLRYT +L+NG+  VCERSLSGS
Sbjct: 241 RSLEVFTMFPAGNGGTIELVYMQTYAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGS 300

Query: 354 GAGPNSASAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEPWSVPEVVRPLYESSKA 413
           GAGPN+ASA+QFVRAEML SGYLIRPCDGGGSIIHIVDHLNLE WSVP+V+RPLYESSK 
Sbjct: 301 GAGPNAASASQFVRAEMLSSGYLIRPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKV 360

Query: 414 VAQKMTIAAFLYVRQVAQETSGEVVYSLGRQPAVLRTFSQRLSRGFNEAVNGFNDDGWSL 473
           VAQKMTI+A  Y+RQ+AQE++GEVVY LGRQPAVLRTFSQRLSRGFN+AVNGF DDGWS 
Sbjct: 361 VAQKMTISALRYIRQLAQESNGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFGDDGWST 420

Query: 474 MNYDGAEDVSLAINSSKNVNTSYDPVNSLAFHAGVLCAKASMLIQNVPPIALIRFLREHR 533
           M+ DGAED+ +AINS+K++N   +  NSL+F  GVLCAKASML+QNVPP  LIRFLREHR
Sbjct: 421 MHCDGAEDIIVAINSTKHLN---NISNSLSFLGGVLCAKASMLLQNVPPAVLIRFLREHR 480

Query: 534 SEWADFNVDAYSAASLKTGSYVYPGMRPTRFTGSQIIMPLGHTIEQEEM----------- 593
           SEWADFNVDAYSAA+LK GS+ YPGMRPTRFTGSQIIMPLGHTIE EEM           
Sbjct: 481 SEWADFNVDAYSAATLKAGSFAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSL 540

Query: 594 ----------------CTGIDENAVGACSELVFAPINEMFPDDAVLLPSGFRIIPLHSET 653
                           CTGIDENAVGACSEL+FAPINEMFPDDA L+PSGFR+IP+ ++T
Sbjct: 541 AQEDAFMSRDVHLLQICTGIDENAVGACSELIFAPINEMFPDDAPLVPSGFRVIPVDAKT 600

Query: 654 GDSKHTWKNLNSTMDLTSNLEVGSSASQDAA-AASTSNFRSVLTIAFQFSFGSNLQDDVA 713
           GD +      + T+DLTS+LEVG S    +  + S+S+ R +LTIAFQF F +NLQ++VA
Sbjct: 601 GDVQDLLTANHRTLDLTSSLEVGPSPENASGNSFSSSSSRCILTIAFQFPFENNLQENVA 660

Query: 714 AMARQYVRSVVSAVQRVAVAMSPSGLSLPSERRLSSACPEALTLARWICYSYRCHTGTEL 773
            MA QYVRSV+S+VQRVA+A+SPSG+S     +LS   PEA+TLA+WI  SY  H G+EL
Sbjct: 661 GMACQYVRSVISSVQRVAMAISPSGISPSLGSKLSPGSPEAVTLAQWISQSYSHHLGSEL 720

Query: 774 VLSDSVDGGDSVLKHLWNHQDAILCCSLKSLPPVFMFANQAGLDMLETTLVALQDITLDK 833
           +  DS+   DSVLK LW+HQDAILCCSLK   PVFMFANQAGLDMLETTLVALQDITL+K
Sbjct: 721 LTIDSLGSDDSVLKLLWDHQDAILCCSLKP-QPVFMFANQAGLDMLETTLVALQDITLEK 780

Query: 834 ILGDSAHKAFSADFSNLMHQGFAYIPAGICISTMGRHASFEQAIAWKVLA---EDESTVH 868
           I  +S  KA  +DF+ LM QGFA +P+GIC+STMGRH S+EQA+AWKV A   E+ + +H
Sbjct: 781 IFDESGRKAICSDFAKLMQQGFACLPSGICVSTMGRHVSYEQAVAWKVFAASEENNNNLH 840

[Close]

BLAST of CmaCh12G008180 vs. ExPASy Swiss-Prot
Match: A2Z8L4 (Homeobox-leucine zipper protein HOX9 OS=Oryza sativa subsp. indica OX=39946 GN=HOX9 PE=2 SV=2)

HSP 1 Score: 1068.9 bits (2763), Expect = 3.0e-311
Identity = 552/850 (64.94%), Postives = 656/850 (77.18%), Query Frame = 0


Query: 53  AMAMATAHHRESGDGGIDGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDC 112
           A+AM +    + G GG D     +GKYVRYT EQVEALERVYAECPKPSS RRQQL+RDC
Sbjct: 4   AVAMRSGSGSDGGGGGYDKAGMDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDC 63

Query: 113 PILANIEPKQIKVWFQNRRCREKQRKEASRLQSLNSKLTAMNKLLMEENDRLQKHVSQLI 172
           PILANIEPKQIKVWFQNRRCR+KQRKEASRLQ++N KLTAMNKLLMEEN+RLQK VSQL+
Sbjct: 64  PILANIEPKQIKVWFQNRRCRDKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLV 123

Query: 173 CENGSMRQHLQTANAPAAPVTDASCDTVATTPQHSLRDASSPAGLLSIAEEILAAFLSKA 232
            EN  M+Q LQ  +       D SC++  TTPQ+ LRDAS+P+GLL+IAEE L  FLSKA
Sbjct: 124 HENAYMKQQLQNPSLG----NDTSCESNVTTPQNPLRDASNPSGLLTIAEETLTEFLSKA 183

Query: 233 TGTAIDWVQLPGMKPGPDSVGIFAVSQSCSGVAARACGLID-------EILKDRPSWFRN 292
           TGTA+DWV +PGMKPGPDS GI AVS  C GVAARACGL++       EILKDRPSWFR+
Sbjct: 184 TGTAVDWVPMPGMKPGPDSFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRD 243

Query: 293 CRSVEVFTMFPTGNGGTIELVYTQVYAPTTLAPARDFWTLRYTKTLENGNLAVCERSLSG 352
           CRS+EVFTMFP GNGGTIELVY Q+YAPTTL PARDFWTLRYT T+++G+L VCERSLSG
Sbjct: 244 CRSLEVFTMFPAGNGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMDDGSLVVCERSLSG 303

Query: 353 SGAGPNSASAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEPWSVPEVVRPLYESSK 412
           SG GP++ASA QFVRAEMLPSGYL+RPC+GGGSI+HIVDHL+LE WSVPEV+RPLYESS+
Sbjct: 304 SGGGPSTASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSR 363

Query: 413 AVAQKMTIAAFLYVRQVAQETSGEVVYSLGRQPAVLRTFSQRLSRGFNEAVNGFNDDGWS 472
            VAQKMT AA  ++RQ+AQETSGEVVY+LGRQPAVLRTFSQRLSRGFN+A++GFNDDGWS
Sbjct: 364 VVAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWS 423

Query: 473 LMNYDGAEDVSLAINSSKNVNTSYDPVNSLAFHAGVLCAKASMLIQNVPPIALIRFLREH 532
           +M  DG EDV +A N+ K  NTS    N+     GV+CAKASML+Q+VPP  L+RFLREH
Sbjct: 424 VMGGDGIEDVIIACNAKKVRNTS-TSANAFVTPGGVICAKASMLLQSVPPAVLVRFLREH 483

Query: 533 RSEWADFNVDAYSAASLKTGSYVYPGMRPTRFTGSQIIMPLGHTIEQEE----------- 592
           RSEWAD+N DAYSA+SLKT S   PG+RP RF+GSQIIMPL HT+E EE           
Sbjct: 484 RSEWADYNFDAYSASSLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQA 543

Query: 593 ----------------MCTGIDENAVGACSELVFAPINEMFPDDAVLLPSGFRIIPLHSE 652
                           +CTGIDE ++G+C +LVFAPI+E+FPDDA L+ SGFR+IPL   
Sbjct: 544 LTHDDGLMSRDIHLLQLCTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPL--- 603

Query: 653 TGDSKHTWKNLNSTMDLTSNLEVGSSASQDA-AAASTSNFRSVLTIAFQFSFGSNLQDDV 712
             D K        T+DL S+LEVGS+A     A+    N RSVLTIAFQF +  +LQD V
Sbjct: 604 --DMKTDGTPAGRTLDLASSLEVGSTAQPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSV 663

Query: 713 AAMARQYVRSVVSAVQRVAVAMSPSGLSLPSERRLSSACPEALTLARWICYSYRCHTGTE 772
           A MARQYVRS+VS+VQRV++A+SPS   L + +++ S  PEA TLARWIC SY+ H G E
Sbjct: 664 ATMARQYVRSIVSSVQRVSMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVE 723

Query: 773 LVLSDSVDGGDSVLKHLWNHQDAILCCSLKSLPPVFMFANQAGLDMLETTLVALQDITLD 832
           L L  + D G+++LK LW+++DAILCCS K   PVF FAN+ GL+MLET+LVALQD++LD
Sbjct: 724 L-LRQADDAGEALLKMLWDYEDAILCCSFKE-KPVFTFANEMGLNMLETSLVALQDLSLD 783

Query: 833 KILGDSAHKAFSADFSNLMHQGFAYIPAGICISTMGRHASFEQAIAWKVLAEDESTVHCL 868
           KI  ++  KA   +   LM QG+ Y+P G+C+S MGRH SFEQA+AWKVL ED + VHCL
Sbjct: 784 KIFDEAGRKALYNEIPKLMEQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGED-NNVHCL 840

[Close]

BLAST of CmaCh12G008180 vs. ExPASy Swiss-Prot
Match: Q9AV49 (Homeobox-leucine zipper protein HOX9 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX9 PE=2 SV=1)

HSP 1 Score: 1067.0 bits (2758), Expect = 1.1e-310
Identity = 552/850 (64.94%), Postives = 655/850 (77.06%), Query Frame = 0


Query: 53  AMAMATAHHRESGDGGIDGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDC 112
           A+AM +    + G GG D     +GKYVRYT EQVEALERVYAECPKPSS RRQQL+RDC
Sbjct: 4   AVAMRSGSGSDGGGGGYDKAGMDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDC 63

Query: 113 PILANIEPKQIKVWFQNRRCREKQRKEASRLQSLNSKLTAMNKLLMEENDRLQKHVSQLI 172
           PILANIEPKQIKVWFQNRRCR+KQRKEASRLQ++N KLTAMNKLLMEEN+RLQK VSQL+
Sbjct: 64  PILANIEPKQIKVWFQNRRCRDKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLV 123

Query: 173 CENGSMRQHLQTANAPAAPVTDASCDTVATTPQHSLRDASSPAGLLSIAEEILAAFLSKA 232
            EN  M+Q LQ  +       D SC++  TTPQ+ LRDAS+P+GLL+IAEE L  FLSKA
Sbjct: 124 HENAYMKQQLQNPSLG----NDTSCESNVTTPQNPLRDASNPSGLLTIAEETLTEFLSKA 183

Query: 233 TGTAIDWVQLPGMKPGPDSVGIFAVSQSCSGVAARACGLID-------EILKDRPSWFRN 292
           TGTA+DWV +PGMKPGPDS GI AVS  C GVAARACGL++       EILKDRPSWFR+
Sbjct: 184 TGTAVDWVPMPGMKPGPDSFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRD 243

Query: 293 CRSVEVFTMFPTGNGGTIELVYTQVYAPTTLAPARDFWTLRYTKTLENGNLAVCERSLSG 352
           CRS+EVFTMFP GNGGTIELVY Q+YAPTTL PARDFWTLRYT T+E+G+L VCERSLSG
Sbjct: 244 CRSLEVFTMFPAGNGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSG 303

Query: 353 SGAGPNSASAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEPWSVPEVVRPLYESSK 412
           SG GP++ASA QFVRAEMLPSGYL+RPC+GGGSI+HIVDHL+LE WSVPEV+RPLYESS+
Sbjct: 304 SGGGPSTASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSR 363

Query: 413 AVAQKMTIAAFLYVRQVAQETSGEVVYSLGRQPAVLRTFSQRLSRGFNEAVNGFNDDGWS 472
            VAQKMT AA  ++RQ+AQETSGEVVY+LGRQPAVLRTFSQRLSRGFN+A++GFNDDGWS
Sbjct: 364 VVAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWS 423

Query: 473 LMNYDGAEDVSLAINSSKNVNTSYDPVNSLAFHAGVLCAKASMLIQNVPPIALIRFLREH 532
           +M  DG EDV +A N+ K  NTS    N+     GV+CAKASML+Q+VPP  L+RFLREH
Sbjct: 424 VMGGDGIEDVIIACNAKKVRNTS-TSANAFVTPGGVICAKASMLLQSVPPAVLVRFLREH 483

Query: 533 RSEWADFNVDAYSAASLKTGSYVYPGMRPTRFTGSQIIMPLGHTIEQEE----------- 592
           RSEWAD+N DAYSA+SLKT S   PG+RP RF+GSQIIMPL HT+E EE           
Sbjct: 484 RSEWADYNFDAYSASSLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQA 543

Query: 593 ----------------MCTGIDENAVGACSELVFAPINEMFPDDAVLLPSGFRIIPLHSE 652
                           +CTGIDE ++G+C +LV API+E+FPDDA L+ SGFR+IPL   
Sbjct: 544 LTHDDGLMSRDIHLLQLCTGIDEKSMGSCFQLVSAPIDELFPDDAPLISSGFRVIPL--- 603

Query: 653 TGDSKHTWKNLNSTMDLTSNLEVGSSASQDA-AAASTSNFRSVLTIAFQFSFGSNLQDDV 712
             D K        T+DL S+LEVGS+A     A+    N RSVLTIAFQF +  +LQD V
Sbjct: 604 --DMKTDGTPAGRTLDLASSLEVGSTAQPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSV 663

Query: 713 AAMARQYVRSVVSAVQRVAVAMSPSGLSLPSERRLSSACPEALTLARWICYSYRCHTGTE 772
           A MARQYVRS+VS+VQRV++A+SPS   L + +++ S  PEA TLARWIC SY+ H G E
Sbjct: 664 ATMARQYVRSIVSSVQRVSMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVE 723

Query: 773 LVLSDSVDGGDSVLKHLWNHQDAILCCSLKSLPPVFMFANQAGLDMLETTLVALQDITLD 832
           L L  + D G+++LK LW+++DAILCCS K   PVF FAN+ GL+MLET+LVALQD++LD
Sbjct: 724 L-LRQADDAGEALLKMLWDYEDAILCCSFKE-KPVFTFANEMGLNMLETSLVALQDLSLD 783

Query: 833 KILGDSAHKAFSADFSNLMHQGFAYIPAGICISTMGRHASFEQAIAWKVLAEDESTVHCL 868
           KI  ++  KA   +   LM QG+ Y+P G+C+S MGRH SFEQA+AWKVL ED + VHCL
Sbjct: 784 KIFDEAGRKALYNEIPKLMEQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGED-NNVHCL 840

[Close]

BLAST of CmaCh12G008180 vs. ExPASy Swiss-Prot
Match: A2XBL9 (Homeobox-leucine zipper protein HOX10 OS=Oryza sativa subsp. indica OX=39946 GN=HOX10 PE=2 SV=2)

HSP 1 Score: 1060.4 bits (2741), Expect = 1.1e-308
Identity = 552/854 (64.64%), Postives = 664/854 (77.75%), Query Frame = 0


Query: 54  MAMATAHHRESGDGG----IDGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLV 113
           MA A A    S DGG    + G +DS GKYVRYT EQVEALERVYA+CPKP+S RRQQL+
Sbjct: 1   MAAAVAMRGSSSDGGGYDKVSG-MDS-GKYVRYTPEQVEALERVYADCPKPTSSRRQQLL 60

Query: 114 RDCPILANIEPKQIKVWFQNRRCREKQRKEASRLQSLNSKLTAMNKLLMEENDRLQKHVS 173
           R+CPILANIEPKQIKVWFQNRRCR+KQRKE+SRLQ++N KLTAMNKLLMEEN+RLQK VS
Sbjct: 61  RECPILANIEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVS 120

Query: 174 QLICENGSMRQHLQTANAPAAPVTDASCDTVATTPQHSLRDASSPAGLLSIAEEILAAFL 233
           QL+ EN  MRQ LQ  N P A   D SC++  TTPQ+ LRDAS+P+GLLSIAEE L  FL
Sbjct: 121 QLVHENAHMRQQLQ--NTPLA--NDTSCESNVTTPQNPLRDASNPSGLLSIAEETLTEFL 180

Query: 234 SKATGTAIDWVQLPGMKPGPDSVGIFAVSQSCSGVAARACGLID-------EILKDRPSW 293
           SKATGTAIDWVQ+PGMKPGPDSVGI A+S  C GVAARACGL++       EILKDRPSW
Sbjct: 181 SKATGTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEILKDRPSW 240

Query: 294 FRNCRSVEVFTMFPTGNGGTIELVYTQVYAPTTLAPARDFWTLRYTKTLENGNLAVCERS 353
           FR+CR++EVFTM P GNGGT+ELVYTQ+YAPTTL PARDFWTLRYT T+E+G+L VCERS
Sbjct: 241 FRDCRNLEVFTMIPAGNGGTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERS 300

Query: 354 LSGSGAGPNSASAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEPWSVPEVVRPLYE 413
           LSGSG GP++ASA Q+VRAEMLPSGYL+RPC+GGGSI+HIVDHL+LE WSVPEV+RPLYE
Sbjct: 301 LSGSGGGPSAASAQQYVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYE 360

Query: 414 SSKAVAQKMTIAAFLYVRQVAQETSGEVVYSLGRQPAVLRTFSQRLSRGFNEAVNGFNDD 473
           SS+ VAQKMT AA  ++RQ+AQETSGEVVY+LGRQPAVLRTFSQRLSRGFN+A++GFNDD
Sbjct: 361 SSRVVAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDD 420

Query: 474 GWSLMNYDGAEDVSLAINSSKNVNTSYDPVNSLAFHAGVLCAKASMLIQNVPPIALIRFL 533
           GWS+M  DG EDV +A NS+K + ++ +   +     G++CAKASML+Q+VPP  L+RFL
Sbjct: 421 GWSIMGGDGVEDVVIACNSTKKIRSNSNAGIAFGAPGGIICAKASMLLQSVPPAVLVRFL 480

Query: 534 REHRSEWADFNVDAYSAASLKTGSYVYPGMRPTRFTGSQIIMPLGHTIEQEE-------- 593
           REHRSEWAD+N+DAY A++LKT +   PG+RP RF+GSQII+PL HT+E EE        
Sbjct: 481 REHRSEWADYNIDAYLASTLKTSACSLPGLRPMRFSGSQIIIPLAHTVENEEILEVVRLE 540

Query: 594 -------------------MCTGIDENAVGACSELVFAPINEMFPDDAVLLPSGFRIIPL 653
                              +CTGIDE +VG+  +LVFAPI++ FPD+  L+ SGFR+IPL
Sbjct: 541 GQPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPIDD-FPDETPLISSGFRVIPL 600

Query: 654 HSETGDSKHTWKNLNSTMDLTSNLEVGSSASQDA--AAASTSNFRSVLTIAFQFSFGSNL 713
                D K    +   T+DL S+LEVGS+ +Q +  A+A   N RSVLTIAFQF +  +L
Sbjct: 601 -----DMKTDGASSGRTLDLASSLEVGSATAQASGDASADDCNLRSVLTIAFQFPYELHL 660

Query: 714 QDDVAAMARQYVRSVVSAVQRVAVAMSPSGLSLPSERRLSSACPEALTLARWICYSYRCH 773
           QD VAAMARQYVRS+VSAVQRV++A+SPS   L + +R+ S  PEA TLARW+C SY  H
Sbjct: 661 QDSVAAMARQYVRSIVSAVQRVSMAISPSQTGLNAGQRIISGFPEAATLARWVCQSYHYH 720

Query: 774 TGTELVLSDSVDGGDSVLKHLWNHQDAILCCSLKSLPPVFMFANQAGLDMLETTLVALQD 833
            G EL LS S    + +LK LW++QDAILCCS K   PVF FAN+AGLDMLET+LVALQD
Sbjct: 721 LGVEL-LSQSDGDAEQLLKMLWHYQDAILCCSFKE-KPVFTFANKAGLDMLETSLVALQD 780

Query: 834 ITLDKILGDSAHKAFSADFSNLMHQGFAYIPAGICISTMGRHASFEQAIAWKVLAEDEST 868
           +TLD+I  +   +A  ++   LM QG  Y+P+G+C+S MGRH SF+QA+AWKVLAED S 
Sbjct: 781 LTLDRIFDEPGKEALFSNIPKLMEQGHVYLPSGVCMSGMGRHVSFDQAVAWKVLAED-SN 839

[Close]

BLAST of CmaCh12G008180 vs. ExPASy Swiss-Prot
Match: Q6TAQ6 (Homeobox-leucine zipper protein HOX10 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX10 PE=2 SV=1)

HSP 1 Score: 1057.4 bits (2733), Expect = 8.9e-308
Identity = 551/854 (64.52%), Postives = 663/854 (77.63%), Query Frame = 0


Query: 54  MAMATAHHRESGDGG----IDGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLV 113
           MA A A    S DGG    + G +DS GKYVRYT EQVEALERVYA+CPKP+S RRQQL+
Sbjct: 1   MAAAVAMRGSSSDGGGYDKVSG-MDS-GKYVRYTPEQVEALERVYADCPKPTSSRRQQLL 60

Query: 114 RDCPILANIEPKQIKVWFQNRRCREKQRKEASRLQSLNSKLTAMNKLLMEENDRLQKHVS 173
           R+CPILANIEPKQIKVWFQNRRCR+KQRKE+SRLQ++N KLTAMNKLLMEEN+RLQK VS
Sbjct: 61  RECPILANIEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVS 120

Query: 174 QLICENGSMRQHLQTANAPAAPVTDASCDTVATTPQHSLRDASSPAGLLSIAEEILAAFL 233
           QL+ EN  MRQ LQ  N P A   D SC++  TTPQ+ LRDAS+P+GLLSIAEE L  FL
Sbjct: 121 QLVHENAHMRQQLQ--NTPLA--NDTSCESNVTTPQNPLRDASNPSGLLSIAEETLTEFL 180

Query: 234 SKATGTAIDWVQLPGMKPGPDSVGIFAVSQSCSGVAARACGLID-------EILKDRPSW 293
           SKATGTAIDWVQ+PGMKPGPDSVGI A+S  C GVAARACGL++       EILKDRPSW
Sbjct: 181 SKATGTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEILKDRPSW 240

Query: 294 FRNCRSVEVFTMFPTGNGGTIELVYTQVYAPTTLAPARDFWTLRYTKTLENGNLAVCERS 353
           FR+CR++EVFTM P GNGGT+ELVYTQ+YAPTTL PARDFWTLRYT T+E+G+L VCERS
Sbjct: 241 FRDCRNLEVFTMIPAGNGGTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERS 300

Query: 354 LSGSGAGPNSASAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEPWSVPEVVRPLYE 413
           LSGSG GP++ASA Q+VRAEMLPSGYL+RPC+GGGSI+HIVDHL+LE WSVPEV+RPLYE
Sbjct: 301 LSGSGGGPSAASAQQYVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYE 360

Query: 414 SSKAVAQKMTIAAFLYVRQVAQETSGEVVYSLGRQPAVLRTFSQRLSRGFNEAVNGFNDD 473
           SS+ VAQKMT AA  ++RQ+AQETSGEVVY+LGRQPAVLRTFSQRLSRGFN+A++GFNDD
Sbjct: 361 SSRVVAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDD 420

Query: 474 GWSLMNYDGAEDVSLAINSSKNVNTSYDPVNSLAFHAGVLCAKASMLIQNVPPIALIRFL 533
           GWS+M  DG EDV +A NS+K + ++ +   +     G++CAKASML+Q+VPP  L+RFL
Sbjct: 421 GWSIMGGDGVEDVVIACNSTKKIRSNSNAGIAFGAPGGIICAKASMLLQSVPPAVLVRFL 480

Query: 534 REHRSEWADFNVDAYSAASLKTGSYVYPGMRPTRFTGSQIIMPLGHTIEQEE-------- 593
           REHRSEWAD+N+DAY A++LKT +    G+RP RF+GSQII+PL HT+E EE        
Sbjct: 481 REHRSEWADYNIDAYLASTLKTSACSLTGLRPMRFSGSQIIIPLAHTVENEEILEVVRLE 540

Query: 594 -------------------MCTGIDENAVGACSELVFAPINEMFPDDAVLLPSGFRIIPL 653
                              +CTGIDE +VG+  +LVFAPI++ FPD+  L+ SGFR+IPL
Sbjct: 541 GQPLTHDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPIDD-FPDETPLISSGFRVIPL 600

Query: 654 HSETGDSKHTWKNLNSTMDLTSNLEVGSSASQDA--AAASTSNFRSVLTIAFQFSFGSNL 713
                D K    +   T+DL S+LEVGS+ +Q +  A+A   N RSVLTIAFQF +  +L
Sbjct: 601 -----DMKTDGASSGRTLDLASSLEVGSATAQASGDASADDCNLRSVLTIAFQFPYELHL 660

Query: 714 QDDVAAMARQYVRSVVSAVQRVAVAMSPSGLSLPSERRLSSACPEALTLARWICYSYRCH 773
           QD VAAMARQYVRS+VSAVQRV++A+SPS   L + +R+ S  PEA TLARW+C SY  H
Sbjct: 661 QDSVAAMARQYVRSIVSAVQRVSMAISPSQTGLNAGQRIISGFPEAATLARWVCQSYHYH 720

Query: 774 TGTELVLSDSVDGGDSVLKHLWNHQDAILCCSLKSLPPVFMFANQAGLDMLETTLVALQD 833
            G EL LS S    + +LK LW++QDAILCCS K   PVF FAN+AGLDMLET+LVALQD
Sbjct: 721 LGVEL-LSQSDGDAEQLLKMLWHYQDAILCCSFKE-KPVFTFANKAGLDMLETSLVALQD 780

Query: 834 ITLDKILGDSAHKAFSADFSNLMHQGFAYIPAGICISTMGRHASFEQAIAWKVLAEDEST 868
           +TLD+I  +   +A  ++   LM QG  Y+P+G+C+S MGRH SF+QA+AWKVLAED S 
Sbjct: 781 LTLDRIFDEPGKEALFSNIPKLMEQGHVYLPSGVCMSGMGRHVSFDQAVAWKVLAED-SN 839

[Close]

BLAST of CmaCh12G008180 vs. TAIR 10
Match: AT5G60690.1 (Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein )

HSP 1 Score: 1191.0 bits (3080), Expect = 0.0e+00
Identity = 611/852 (71.71%), Postives = 699/852 (82.04%), Query Frame = 0


Query: 54  MAMATAHHRESGDGGIDGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCP 113
           M MA A+HRE     ++ HLDS+GKYVRYT EQVEALERVYAECPKPSSLRRQQL+R+C 
Sbjct: 1   MEMAVANHRERSSDSMNRHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECS 60

Query: 114 ILANIEPKQIKVWFQNRRCREKQRKEASRLQSLNSKLTAMNKLLMEENDRLQKHVSQLIC 173
           ILANIEPKQIKVWFQNRRCR+KQRKEASRLQS+N KL+AMNKLLMEENDRLQK VSQL+C
Sbjct: 61  ILANIEPKQIKVWFQNRRCRDKQRKEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVC 120

Query: 174 ENGSMRQHLQTANAPAAPVTDASCDTVATTPQHSLRDASSPAGLLSIAEEILAAFLSKAT 233
           ENG M+Q L T       V D SC++V TTPQHSLRDA+SPAGLLSIAEE LA FLSKAT
Sbjct: 121 ENGYMKQQLTTV------VNDPSCESVVTTPQHSLRDANSPAGLLSIAEETLAEFLSKAT 180

Query: 234 GTAIDWVQLPGMKPGPDSVGIFAVSQSCSGVAARACGLID-------EILKDRPSWFRNC 293
           GTA+DWVQ+PGMKPGPDSVGIFA+SQ C+GVAARACGL+        EILKDRPSWFR+C
Sbjct: 181 GTAVDWVQMPGMKPGPDSVGIFAISQRCNGVAARACGLVSLEPMKIAEILKDRPSWFRDC 240

Query: 294 RSVEVFTMFPTGNGGTIELVYTQVYAPTTLAPARDFWTLRYTKTLENGNLAVCERSLSGS 353
           RS+EVFTMFP GNGGTIELVY Q YAPTTLAPARDFWTLRYT +L+NG+  VCERSLSGS
Sbjct: 241 RSLEVFTMFPAGNGGTIELVYMQTYAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGS 300

Query: 354 GAGPNSASAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEPWSVPEVVRPLYESSKA 413
           GAGPN+ASA+QFVRAEML SGYLIRPCDGGGSIIHIVDHLNLE WSVP+V+RPLYESSK 
Sbjct: 301 GAGPNAASASQFVRAEMLSSGYLIRPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKV 360

Query: 414 VAQKMTIAAFLYVRQVAQETSGEVVYSLGRQPAVLRTFSQRLSRGFNEAVNGFNDDGWSL 473
           VAQKMTI+A  Y+RQ+AQE++GEVVY LGRQPAVLRTFSQRLSRGFN+AVNGF DDGWS 
Sbjct: 361 VAQKMTISALRYIRQLAQESNGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFGDDGWST 420

Query: 474 MNYDGAEDVSLAINSSKNVNTSYDPVNSLAFHAGVLCAKASMLIQNVPPIALIRFLREHR 533
           M+ DGAED+ +AINS+K++N   +  NSL+F  GVLCAKASML+QNVPP  LIRFLREHR
Sbjct: 421 MHCDGAEDIIVAINSTKHLN---NISNSLSFLGGVLCAKASMLLQNVPPAVLIRFLREHR 480

Query: 534 SEWADFNVDAYSAASLKTGSYVYPGMRPTRFTGSQIIMPLGHTIEQEEM----------- 593
           SEWADFNVDAYSAA+LK GS+ YPGMRPTRFTGSQIIMPLGHTIE EEM           
Sbjct: 481 SEWADFNVDAYSAATLKAGSFAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSL 540

Query: 594 ----------------CTGIDENAVGACSELVFAPINEMFPDDAVLLPSGFRIIPLHSET 653
                           CTGIDENAVGACSEL+FAPINEMFPDDA L+PSGFR+IP+ ++T
Sbjct: 541 AQEDAFMSRDVHLLQICTGIDENAVGACSELIFAPINEMFPDDAPLVPSGFRVIPVDAKT 600

Query: 654 GDSKHTWKNLNSTMDLTSNLEVGSSASQDAA-AASTSNFRSVLTIAFQFSFGSNLQDDVA 713
           GD +      + T+DLTS+LEVG S    +  + S+S+ R +LTIAFQF F +NLQ++VA
Sbjct: 601 GDVQDLLTANHRTLDLTSSLEVGPSPENASGNSFSSSSSRCILTIAFQFPFENNLQENVA 660

Query: 714 AMARQYVRSVVSAVQRVAVAMSPSGLSLPSERRLSSACPEALTLARWICYSYRCHTGTEL 773
            MA QYVRSV+S+VQRVA+A+SPSG+S     +LS   PEA+TLA+WI  SY  H G+EL
Sbjct: 661 GMACQYVRSVISSVQRVAMAISPSGISPSLGSKLSPGSPEAVTLAQWISQSYSHHLGSEL 720

Query: 774 VLSDSVDGGDSVLKHLWNHQDAILCCSLKSLPPVFMFANQAGLDMLETTLVALQDITLDK 833
           +  DS+   DSVLK LW+HQDAILCCSLK   PVFMFANQAGLDMLETTLVALQDITL+K
Sbjct: 721 LTIDSLGSDDSVLKLLWDHQDAILCCSLKP-QPVFMFANQAGLDMLETTLVALQDITLEK 780

Query: 834 ILGDSAHKAFSADFSNLMHQGFAYIPAGICISTMGRHASFEQAIAWKVLA---EDESTVH 868
           I  +S  KA  +DF+ LM QGFA +P+GIC+STMGRH S+EQA+AWKV A   E+ + +H
Sbjct: 781 IFDESGRKAICSDFAKLMQQGFACLPSGICVSTMGRHVSYEQAVAWKVFAASEENNNNLH 840

[Close]

BLAST of CmaCh12G008180 vs. TAIR 10
Match: AT2G34710.1 (Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein )

HSP 1 Score: 994.6 bits (2570), Expect = 5.0e-290
Identity = 526/860 (61.16%), Postives = 631/860 (73.37%), Query Frame = 0


Query: 61  HRESGDGGIDGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEP 120
           +RES D G+D     +GKYVRYT EQVEALERVY ECPKPSSLRRQQL+R+CPIL+NIEP
Sbjct: 13  NRESPDKGLD-----SGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEP 72

Query: 121 KQIKVWFQNRRCREKQRKEASRLQSLNSKLTAMNKLLMEENDRLQKHVSQLICENGSMRQ 180
           KQIKVWFQNRRCREKQRKEA+RLQ++N KL AMNKLLMEENDRLQK VS L+ ENG M+ 
Sbjct: 73  KQIKVWFQNRRCREKQRKEAARLQTVNRKLNAMNKLLMEENDRLQKQVSNLVYENGHMKH 132

Query: 181 HLQTANAPAAPVTDASCDTVATT----------PQHSLRDASSPAGLLSIAEEILAAFLS 240
            L TA   +   TD SC++V  +          PQH  RDA++PAGLLSIAEE LA FLS
Sbjct: 133 QLHTA---SGTTTDNSCESVVVSGQQHQQQNPNPQHQQRDANNPAGLLSIAEEALAEFLS 192

Query: 241 KATGTAIDWVQLPGMKPGPDSVGIFAVSQSCSGVAARACGLID-------EILKDRPSWF 300
           KATGTA+DWVQ+ GMKPGPDS+GI A+S++CSG+AARACGL+        EILKDRPSW 
Sbjct: 193 KATGTAVDWVQMIGMKPGPDSIGIVAISRNCSGIAARACGLVSLEPMKVAEILKDRPSWL 252

Query: 301 RNCRSVEVFTMFPTGNGGTIELVYTQVYAPTTLAPARDFWTLRYTKTLENGNLAVCERSL 360
           R+CRSV+  ++ P GNGGTIEL+YTQ+YAPTTLA ARDFWTLRY+  LE+G+  VCERSL
Sbjct: 253 RDCRSVDTLSVIPAGNGGTIELIYTQMYAPTTLAAARDFWTLRYSTCLEDGSYVVCERSL 312

Query: 361 SGSGAGPNSASAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEPWSVPEVVRPLYES 420
           + +  GP    ++ FVRAEM PSG+LIRPCDGGGSI+HIVDH++L+ WSVPEV+RPLYES
Sbjct: 313 TSATGGPTGPPSSNFVRAEMKPSGFLIRPCDGGGSILHIVDHVDLDAWSVPEVMRPLYES 372

Query: 421 SKAVAQKMTIAAFLYVRQVAQETSGEVVYSLGRQPAVLRTFSQRLSRGFNEAVNGFNDDG 480
           SK +AQKMT+AA  +VRQ+AQETSGEV Y  GRQPAVLRTFSQRL RGFN+AVNGF DDG
Sbjct: 373 SKILAQKMTVAALRHVRQIAQETSGEVQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDG 432

Query: 481 WSLMNYDGAEDVSLAINSS--KNVNTSYDPVNSLAFHAGVLCAKASMLIQNVPPIALIRF 540
           WS M  DGAEDV++ IN S  K   + Y      +F +GVLCAKASML+QNVPP  L+RF
Sbjct: 433 WSPMGSDGAEDVTVMINLSPGKFGGSQYGNSFLPSFGSGVLCAKASMLLQNVPPAVLVRF 492

Query: 541 LREHRSEWADFNVDAYSAASLKTGSYVYPGMRPTRFTGSQIIMPLGHTIEQEE------- 600
           LREHRSEWAD+ VDAY+AASL+   +  P  R   F  +Q+I+PL  T+E EE       
Sbjct: 493 LREHRSEWADYGVDAYAAASLRASPFAVPCARAGGFPSNQVILPLAQTVEHEESLEVVRL 552

Query: 601 --------------------MCTGIDENAVGACSELVFAPINEMFPDDAVLLPSGFRIIP 660
                               +C+G+DEN VG C++LVFAPI+E F DDA LLPSGFRIIP
Sbjct: 553 EGHAYSPEDMGLARDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRIIP 612

Query: 661 LHSETGDSKHTWKNLNSTMDLTSNLEVGSSASQDAAAASTSNFRSVLTIAFQFSFGSNLQ 720
           L  +   S     + N T+DL S LE GS+     A  +  NFRSVLTIAFQF+F ++ +
Sbjct: 613 LEQK---STPNGASANRTLDLASALE-GSTRQAGEADPNGCNFRSVLTIAFQFTFDNHSR 672

Query: 721 DDVAAMARQYVRSVVSAVQRVAVAMSP------SGLSLPSERRLSSACPEALTLARWICY 780
           D VA+MARQYVRS+V ++QRVA+A++P      S +S+P+        PEALTL RWI  
Sbjct: 673 DSVASMARQYVRSIVGSIQRVALAIAPRPGSNISPISVPTS-------PEALTLVRWISR 732

Query: 781 SYRCHTGTELVLSDSVDGGDSVLKHLWNHQDAILCCSLK-SLPPVFMFANQAGLDMLETT 840
           SY  HTG +L  SDS   GD++L  LWNH DAILCCSLK +  PVF FANQ GLDMLETT
Sbjct: 733 SYSLHTGADLFGSDSQTSGDTLLHQLWNHSDAILCCSLKTNASPVFTFANQTGLDMLETT 792

Query: 841 LVALQDITLDKILGDSAHKAFSADFSNLMHQGFAYIPAGICISTMGRHASFEQAIAWKVL 868
           LVALQDI LDK L +   KA  ++F  +M QG+A++PAG+C S+MGR  S+EQA  WKVL
Sbjct: 793 LVALQDIMLDKTLDEPGRKALCSEFPKIMQQGYAHLPAGVCASSMGRMVSYEQATVWKVL 852

[Close]

BLAST of CmaCh12G008180 vs. TAIR 10
Match: AT1G30490.1 (Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein )

HSP 1 Score: 978.0 bits (2527), Expect = 4.9e-285
Identity = 522/861 (60.63%), Postives = 639/861 (74.22%), Query Frame = 0


Query: 59  AHH----RESGDGGIDGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPI 118
           AHH    R+S D G D     +GKYVRYT EQVEALERVYAECPKPSSLRRQQL+R+CPI
Sbjct: 3   AHHSMDDRDSPDKGFD-----SGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPI 62

Query: 119 LANIEPKQIKVWFQNRRCREKQRKEASRLQSLNSKLTAMNKLLMEENDRLQKHVSQLICE 178
           L NIEP+QIKVWFQNRRCREKQRKE++RLQ++N KL+AMNKLLMEENDRLQK VS L+ E
Sbjct: 63  LCNIEPRQIKVWFQNRRCREKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSNLVYE 122

Query: 179 NGSMRQHLQTANAPAAPVTDASCDTVAT----------TPQHSLRDASSPAGLLSIAEEI 238
           NG M+  + TA   +   TD SC++V            T QH  RD ++PA LLSIAEE 
Sbjct: 123 NGFMKHRIHTA---SGTTTDNSCESVVVSGQQRQQQNPTHQHPQRDVNNPANLLSIAEET 182

Query: 239 LAAFLSKATGTAIDWVQLPGMKPGPDSVGIFAVSQSCSGVAARACGLID-------EILK 298
           LA FL KATGTA+DWVQ+ GMKPGPDS+GI AVS++CSG+AARACGL+        EILK
Sbjct: 183 LAEFLCKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGIAARACGLVSLEPMKVAEILK 242

Query: 299 DRPSWFRNCRSVEVFTMFPTGNGGTIELVYTQVYAPTTLAPARDFWTLRYTKTLENGNLA 358
           DRPSWFR+CR VE   + PTGNGGTIELV TQ+YAPTTLA ARDFWTLRY+ +LE+G+  
Sbjct: 243 DRPSWFRDCRCVETLNVIPTGNGGTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYV 302

Query: 359 VCERSLSGSGAGPNSASAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEPWSVPEVV 418
           VCERSL+ +  GPN   ++ FVRA+ML SG+LIRPCDGGGSIIHIVDH++L+  SVPEV+
Sbjct: 303 VCERSLTSATGGPNGPLSSSFVRAKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVL 362

Query: 419 RPLYESSKAVAQKMTIAAFLYVRQVAQETSGEVVYSLGRQPAVLRTFSQRLSRGFNEAVN 478
           RPLYESSK +AQKMT+AA  +VRQ+AQETSGEV YS GRQPAVLRTFSQRL RGFN+AVN
Sbjct: 363 RPLYESSKILAQKMTVAALRHVRQIAQETSGEVQYSGGRQPAVLRTFSQRLCRGFNDAVN 422

Query: 479 GFNDDGWSLMNYDGAEDVSLAINSS--KNVNTSYDPVNSLAFHAGVLCAKASMLIQNVPP 538
           GF DDGWS M+ DG ED+++ INSS  K   + Y      +F +GVLCAKASML+QNVPP
Sbjct: 423 GFVDDGWSPMSSDGGEDITIMINSSSAKFAGSQYGSSFLPSFGSGVLCAKASMLLQNVPP 482

Query: 539 IALIRFLREHRSEWADFNVDAYSAASLKTGSYVYPGMRPTRFTGSQIIMPLGHTIEQEE- 598
           + LIRFLREHR+EWAD+ VDAYSAASL+   Y  P +R   F  +Q+I+PL  T+E EE 
Sbjct: 483 LVLIRFLREHRAEWADYGVDAYSAASLRATPYAVPCVRTGGFPSNQVILPLAQTLEHEEF 542

Query: 599 --------------------------MCTGIDENAVGACSELVFAPINEMFPDDAVLLPS 658
                                     +C+G+DEN VG C++LVFAPI+E F DDA LLPS
Sbjct: 543 LEVVRLGGHAYSPEDMGLSRDMYLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPS 602

Query: 659 GFRIIPLHSETGDSKHTWKNLNSTMDLTSNLEVGSSASQDAAAASTSNFRSVLTIAFQFS 718
           GFR+IPL  +T  + H  ++ + T DL S+L+ GS+ +      S +N R VLTIAFQF+
Sbjct: 603 GFRVIPLDQKTNPNDH--QSASRTRDLASSLD-GSTKTD-----SETNSRLVLTIAFQFT 662

Query: 719 FGSNLQDDVAAMARQYVRSVVSAVQRVAVAMSPSGLSLPSERRLSSACPEALTLARWICY 778
           F ++ +D+VA MARQYVR+VV ++QRVA+A++P     P   +L ++ PEALTL RWI  
Sbjct: 663 FDNHSRDNVATMARQYVRNVVGSIQRVALAITPR----PGSMQLPTS-PEALTLVRWITR 722

Query: 779 SYRCHTGTELVLSDSVD-GGDSVLKHLWNHQDAILCCSLK-SLPPVFMFANQAGLDMLET 838
           SY  HTG +L  +DS   GGD++LK LW+H DAILCCSLK +  PVF FANQAGLDMLET
Sbjct: 723 SYSIHTGADLFGADSQSCGGDTLLKQLWDHSDAILCCSLKTNASPVFTFANQAGLDMLET 782

Query: 839 TLVALQDITLDKILGDSAHKAFSADFSNLMHQGFAYIPAGICISTMGRHASFEQAIAWKV 868
           TLVALQDI LDK L DS  +A  ++F+ +M QG+A +PAGIC+S+MGR  S+EQA  WKV
Sbjct: 783 TLVALQDIMLDKTLDDSGRRALCSEFAKIMQQGYANLPAGICVSSMGRPVSYEQATVWKV 841

[Close]

BLAST of CmaCh12G008180 vs. TAIR 10
Match: AT4G32880.1 (homeobox gene 8 )

HSP 1 Score: 940.6 bits (2430), Expect = 8.7e-274
Identity = 496/848 (58.49%), Postives = 618/848 (72.88%), Query Frame = 0


Query: 65  GDGGIDGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIK 124
           G G  + H    GKYVRYT EQVEALER+Y +CPKPSS+RRQQL+R+CPIL+NIEPKQIK
Sbjct: 2   GGGSNNSHNMDNGKYVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQIK 61

Query: 125 VWFQNRRCREKQRKEASRLQSLNSKLTAMNKLLMEENDRLQKHVSQLICENGSMRQHLQT 184
           VWFQNRRCREKQRKEASRLQ++N KLTAMNKLLMEENDRLQK VS L+ EN   RQH Q 
Sbjct: 62  VWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSYFRQHPQ- 121

Query: 185 ANAPAAPVTDASCDTVAT------TPQHSLRDASSPAGLLSIAEEILAAFLSKATGTAID 244
            N      TD SC++V T      TPQH  RDA SPAGLLSIA+E L  F+SKATGTA++
Sbjct: 122 -NQGNLATTDTSCESVVTSGQHHLTPQHQPRDA-SPAGLLSIADETLTEFISKATGTAVE 181

Query: 245 WVQLPGMKPGPDSVGIFAVSQSCSGVAARACGLID-------EILKDRPSWFRNCRSVEV 304
           WVQ+PGMKPGPDS+GI A+S  C+G+AARACGL+        EILKD+P W R+CRS+++
Sbjct: 182 WVQMPGMKPGPDSIGIVAISHGCTGIAARACGLVGLDPTRVAEILKDKPCWLRDCRSLDI 241

Query: 305 FTMFPTGNGGTIELVYTQVYAPTTLAPARDFWTLRYTKTLENGNLAVCERSLSGSGAGPN 364
             +  T NGGT+EL+Y Q+YAPTTLAPARDFW LRYT  +E+G+L +CERSL+ +  GP+
Sbjct: 242 VNVLSTANGGTLELIYMQLYAPTTLAPARDFWMLRYTSVMEDGSLVICERSLNNTQNGPS 301

Query: 365 SASAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEPWSVPEVVRPLYESSKAVAQKM 424
              +  FVRAE+LPSGYLIRPC+GGGSI+HIVDH +LEPWSVPEV+R LYESS  +AQ+ 
Sbjct: 302 MPPSPHFVRAEILPSGYLIRPCEGGGSILHIVDHFDLEPWSVPEVLRSLYESSTLLAQRT 361

Query: 425 TIAAFLYVRQVAQETSGEVVYSLGRQPAVLRTFSQRLSRGFNEAVNGFNDDGWSLMNYDG 484
           T+AA  Y+RQ++QE S   V   GR+PA LR  SQRLS+GFNEAVNGF+D+GWS++  DG
Sbjct: 362 TMAALRYLRQISQEISQPNVTGWGRRPAALRALSQRLSKGFNEAVNGFSDEGWSILESDG 421

Query: 485 AEDVSLAINSS--KNVNTSYDPVNS--LAFHAGVLCAKASMLIQNVPPIALIRFLREHRS 544
            +DV+L +NSS  K + TS  P  +   +  + VLCAKASML+QNVPP  L+RFLREHR 
Sbjct: 422 IDDVTLLVNSSPTKMMMTSSLPFANGYTSMPSAVLCAKASMLLQNVPPSILLRFLREHRQ 481

Query: 545 EWADFNVDAYSAASLKTGSYVYPGMRPTRFTGSQIIMPLGHTIEQEE------------- 604
           EWAD ++DAYSAA++K G    P  RP  F G Q+I+PL HTIE EE             
Sbjct: 482 EWADNSIDAYSAAAIKAGPCSLPIPRPGSF-GGQVILPLAHTIENEEFMEVIKLESLGHY 541

Query: 605 --------------MCTGIDENAVGACSELVFAPINEMFPDDAVLLPSGFRIIPLHSETG 664
                         MC+G+DENAV +C+EL+FAPI+  F DDA ++PSGFRIIPL     
Sbjct: 542 QEDMMMPADIFLLQMCSGVDENAVESCAELIFAPIDASFSDDAPIIPSGFRIIPL----- 601

Query: 665 DSKHTWKNLNSTMDLTSNLEVGSSASQDAAAASTSNFRSVLTIAFQFSFGSNLQDDVAAM 724
           DSK    + N T+DL S L+VGS  + D +  S  N +SV+TIAFQ +F  ++Q++VA+M
Sbjct: 602 DSKSEGLSPNRTLDLASALDVGSRTAGD-SCGSRGNSKSVMTIAFQLAFEMHMQENVASM 661

Query: 725 ARQYVRSVVSAVQRVAVAMSPSGLSLPSERRLSSACPEALTLARWICYSYRCHTGTELVL 784
           ARQYVRSV+++VQRVA+A+SPS   L S  R   A PEA TLARWI +SYRC+ G +L+ 
Sbjct: 662 ARQYVRSVIASVQRVALALSPSSHQL-SGLRPPPASPEAHTLARWISHSYRCYLGVDLLK 721

Query: 785 SDSVDGGDSVLKHLWNHQDAILCCSLKSLPPVFMFANQAGLDMLETTLVALQDITLDKIL 844
               D    +LK LW+H DA++CCSLK+L PVF FANQAGLDMLETTLVALQDITLDKI 
Sbjct: 722 PHGTD----LLKSLWHHPDAVMCCSLKALSPVFTFANQAGLDMLETTLVALQDITLDKIF 781

Query: 845 -GDSAHKAFSADFSNLMHQGFAYIPAGICISTMGRHASFEQAIAWKVLAEDESTVHCLAF 868
             ++  K  S++F  +M QGF  +  GIC+S+MGR  ++E+A+ WKVL +DE   HC+ F
Sbjct: 782 DNNNGKKTLSSEFPQIMQQGFMCMDGGICMSSMGRAVTYEKAVGWKVLNDDEDP-HCICF 833

[Close]

BLAST of CmaCh12G008180 vs. TAIR 10
Match: AT1G52150.2 (Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein )

HSP 1 Score: 939.1 bits (2426), Expect = 2.5e-273
Identity = 509/850 (59.88%), Postives = 620/850 (72.94%), Query Frame = 0


Query: 71  GHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNR 130
           G LD+ GKYVRYT EQVEALER+Y +CPKPSS+RRQQL+R+CPIL+NIEPKQIKVWFQNR
Sbjct: 11  GCLDN-GKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNR 70

Query: 131 RCREKQRKEASRLQSLNSKLTAMNKLLMEENDRLQKHVSQLICENGSMRQHLQTANAPAA 190
           RCREKQRKEASRLQ++N KLTAMNKLLMEENDRLQK VSQL+ EN   RQH  T N P+ 
Sbjct: 71  RCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQH--TPN-PSL 130

Query: 191 PVTDASCDTVATTPQHSL------RDASSPAGLLSIAEEILAAFLSKATGTAIDWVQLPG 250
           P  D SC++V T+ QH L      RDA SPAGLLSIAEE LA FLSKATGTA++WVQ+PG
Sbjct: 131 PAKDTSCESVVTSGQHQLASQNPQRDA-SPAGLLSIAEETLAEFLSKATGTAVEWVQMPG 190

Query: 251 MKPGPDSVGIFAVSQSCSGVAARACGLID-------EILKDRPSWFRNCRSVEVFTMFPT 310
           MKPGPDS+GI A+S  C+GVAARACGL+        EI+KDRPSWFR CR+VEV  + PT
Sbjct: 191 MKPGPDSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVEVMNVLPT 250

Query: 311 GNGGTIELVYTQVYAPTTLAPARDFWTLRYTKTLENGNLAVCERSLSGSGAGPNSASAAQ 370
            NGGT+EL+Y Q+YAPTTLAP RDFW LRYT  LE+G+L VCERSL  +  GP+      
Sbjct: 251 ANGGTVELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQN 310

Query: 371 FVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEPWSVPEVVRPLYESSKAVAQKMTIAAFL 430
           FVRAEML SGYLIRPCDGGGSIIHIVDH++LE  SVPEV+RPLYES K +AQK T+AA  
Sbjct: 311 FVRAEMLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAALR 370

Query: 431 YVRQVAQET--SGEVVYSLGRQPAVLRTFSQRLSRGFNEAVNGFNDDGWSLMNYDGAEDV 490
            ++Q+AQE   +   V   GR+PA LR  SQRLSRGFNEAVNGF D+GWS++  D  +DV
Sbjct: 371 QLKQIAQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVIG-DSMDDV 430

Query: 491 SLAINSSKN--------VNTSYDPVNSLAFHAGVLCAKASMLIQNVPPIALIRFLREHRS 550
           ++ +NSS +            + PV+++     VLCAKASML+QNVPP  L+RFLREHRS
Sbjct: 431 TITVNSSPDKLMGLNLTFANGFAPVSNV-----VLCAKASMLLQNVPPAILLRFLREHRS 490

Query: 551 EWADFNVDAYSAASLKTGSYVYPGMRPTRFTGSQIIMPLGHTIEQEE------------- 610
           EWAD N+DAY AA++K G    P        G Q+I+PL HTIE EE             
Sbjct: 491 EWADNNIDAYLAAAVKVG----PCSARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHS 550

Query: 611 --------------MCTGIDENAVGACSELVFAPINEMFPDDAVLLPSGFRIIPLHSETG 670
                         +C+G+DENAVG C+EL+FAPI+  F DDA LLPSGFRIIPL S   
Sbjct: 551 PEDAIVPRDIFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDS--- 610

Query: 671 DSKHTWKNLNSTMDLTSNLEVGSS---ASQDAAAASTSNFRSVLTIAFQFSFGSNLQDDV 730
            +K    + N T+DL S LE+GS+   AS D +  ST   RSV+TIAF+F   S++Q+ V
Sbjct: 611 -AKQEVSSPNRTLDLASALEIGSAGTKASTDQSGNSTC-ARSVMTIAFEFGIESHMQEHV 670

Query: 731 AAMARQYVRSVVSAVQRVAVAMSPSGLSLPSERRLSSACPEALTLARWICYSYRCHTGTE 790
           A+MARQYVR ++S+VQRVA+A+SPS +S     R     PEA TLARWIC SYR + G E
Sbjct: 671 ASMARQYVRGIISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVE 730

Query: 791 LVLSDSVDGGDSVLKHLWNHQDAILCCSLKSLPPVFMFANQAGLDMLETTLVALQDITLD 850
           L+ S+S DG +S+LK+LW+H DAI+CCS+K+L PVF FANQAGLDMLETTLVALQDI+L+
Sbjct: 731 LLKSNS-DGNESILKNLWHHTDAIICCSMKAL-PVFTFANQAGLDMLETTLVALQDISLE 790

Query: 851 KILGDSAHKAFSADFSNLMHQGFAYIPAGICISTMGRHASFEQAIAWKVLAEDESTVHCL 868
           KI  D+  K   ++F  +M QGFA +  GIC+S+MGR  S+E+A+AWKVL E+E+  HC+
Sbjct: 791 KIFDDNGRKTLCSEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEEN-AHCI 837

The following BLAST results are available for this feature:

BLAST of CmaCh12G008180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SE43	0.0e+00	71.71	Homeobox-leucine zipper protein REVOLUTA OS=Arabidopsis thaliana OX=3702 GN=REV ...	[more]
A2Z8L4	3.0e-311	64.94	Homeobox-leucine zipper protein HOX9 OS=Oryza sativa subsp. indica OX=39946 GN=H...	[more]
Q9AV49	1.1e-310	64.94	Homeobox-leucine zipper protein HOX9 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
A2XBL9	1.1e-308	64.64	Homeobox-leucine zipper protein HOX10 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q6TAQ6	8.9e-308	64.52	Homeobox-leucine zipper protein HOX10 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of CmaCh12G008180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60690.1	0.0e+00	71.71	Homeobox-leucine zipper family protein / lipid-binding START domain-containing p...	[more]
AT2G34710.1	5.0e-290	61.16	Homeobox-leucine zipper family protein / lipid-binding START domain-containing p...	[more]
AT1G30490.1	4.9e-285	60.63	Homeobox-leucine zipper family protein / lipid-binding START domain-containing p...	[more]
AT4G32880.1	8.7e-274	58.49	homeobox gene 8	[more]
AT1G52150.2	2.5e-273	59.88	Homeobox-leucine zipper family protein / lipid-binding START domain-containing p...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 143..174
None	No IPR available	GENE3D	1.10.10.60		coord: 72..144 e-value: 2.5E-20 score: 73.7
None	No IPR available	PANTHER	PTHR45950:SF10	HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA	coord: 54..867
None	No IPR available	CDD	cd14686	bZIP	coord: 130..166 e-value: 1.28188E-5 score: 41.3769
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 219..403
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 75..141 e-value: 2.0E-15 score: 67.3
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 79..136 e-value: 3.7E-16 score: 58.7
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 73..137 score: 15.418349
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 78..138 e-value: 2.32976E-16 score: 71.8908
IPR002913	START domain	SMART	SM00234	START_1	coord: 219..422 e-value: 3.3E-34 score: 129.7
IPR002913	START domain	PFAM	PF01852	START	coord: 220..416 e-value: 9.4E-40 score: 136.2
IPR002913	START domain	PROSITE	PS50848	START	coord: 210..404 score: 20.290859
IPR023393	START-like domain superfamily	GENE3D	3.30.530.20		coord: 248..426 e-value: 3.3E-18 score: 68.2
IPR013978	MEKHLA	PFAM	PF08670	MEKHLA	coord: 721..866 e-value: 2.4E-43 score: 147.5
IPR044830	Class III homeodomain-leucine zipper family	PANTHER	PTHR45950	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14	coord: 54..867
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 76..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G008180.1	CmaCh12G008180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0009855	determination of bilateral symmetry
biological_process	GO:0010014	meristem initiation
biological_process	GO:0009944	polarity specification of adaxial/abaxial axis
biological_process	GO:0009956	radial pattern formation
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010051	xylem and phloem pattern formation
biological_process	GO:0010089	xylem development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0003677	DNA binding