CmaCh12G008080 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TATGGCAATGAAGCAATGCTTATAAAACCCAATTTTCTTGGGATTGTTTGGGATTTTCTCGGGAACCAAACAGAAAACAAAAGAAACCATGGTAATCCCAACATGGCTCGAATCTTTACTATCCACGCCGTTTTTCTACGCGTGTCCTTTGCATAAAGACGCTCCGAGAAGTGAATGCAATATGTTTTGCCTCGATTGTCATCATTGCGCGTTCTGCTTCTATTGCCGATCTGACCTACACCACGATCACCGTGTTATTCAGGTCGGTTTTCCTTATCATAATCGAACATGATCCTCTATTTCACAATGTGGGTATCAATTTTATCCTCTTGAATTTGTAATTCGTGTAGATTCGGAGATCATCGTACCATGACGTGGTAAGAGTGGCGGAGATCGAGAAAGTTTTGGATATAAGTGAAATCCAAACATATGTGATAAACAGCGCAAGAGTTTTGTTTTTGAATGAGAGGCCTCAACCGAAGAGCTCTGCTAGTAAAGGAGGCTCCCATGTGTGTGAGATTTGTAGTAGATGTCTCTTGGATCCCTTTCGTTTCTGTTCTCTTGGTTGCAAGGTAAATTTCTTTAGCTTCAAATTGAACTATGCTCGAGTTGATATTTTATGTATTATTTTAAATTTTACTGATAAAATGACGATATGGTAATGTCAAAATGTTAAATTTTTTCTTTATGCTTTAGTTTATGAAACCGACCTATCTAATGATGAAATTGATAATTTACCTACTTTATAATATGACCTAATATAGCATTATAACTTACCTAACCTTGAGTGGGTCCGTGCTATTATGGAAAATAATAATGTAACTACAGGTATTAACCGACCATCTCTTCTTCTTTATAAGCTTTCGACGAAAGTACTCTTTTCCATAAGTTGCAAACCTACTCGAGCGTAGTTCACTTTGAATCTCTCTTTTGGGTTTTATACTTTCAAATCAAGTGCCGTTTTCGTAAGTGATTTAGGTCAAGAACGAGGATTCAAACTTTTACCCGAACGAGCAGAAACACGAGGAGGTGTCGAGAAGAAGGGAAAGAATAGGAAGAAGATTGGGAGAAGAAGAGGAAGAGGAGGAAGAAGAATTGCGTGTAAGGAGAAACCAAGAAGGTGAAATTTACCAAAATCACACGCATCCTTCACATTCAAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA TATGGCAATGAAGCAATGCTTATAAAACCCAATTTTCTTGGGATTGTTTGGGATTTTCTCGGGAACCAAACAGAAAACAAAAGAAACCATGGTAATCCCAACATGGCTCGAATCTTTACTATCCACGCCGTTTTTCTACGCGTGTCCTTTGCATAAAGACGCTCCGAGAAGTGAATGCAATATGTTTTGCCTCGATTGTCATCATTGCGCGTTCTGCTTCTATTGCCGATCTGACCTACACCACGATCACCGTGTTATTCAGATTCGGAGATCATCGTACCATGACGTGGTAAGAGTGGCGGAGATCGAGAAAGTTTTGGATATAAGTGAAATCCAAACATATGTGATAAACAGCGCAAGAGTTTTGTTTTTGAATGAGAGGCCTCAACCGAAGAGCTCTGCTAGTAAAGGAGGCTCCCATGTGTGTGAGATTTGTAGTAGATGTCTCTTGGATCCCTTTCGTTTCTGTTCTCTTGGTTGCAAGGTCAAGAACGAGGATTCAAACTTTTACCCGAACGAGCAGAAACACGAGGAGGTGTCGAGAAGAAGGGAAAGAATAGGAAGAAGATTGGGAGAAGAAGAGGAAGAGGAGGAAGAAGAATTGCGTGTAAGGAGAAACCAAGAAGGTGAAATTTACCAAAATCACACGCATCCTTCACATTCAAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA ATGGTAATCCCAACATGGCTCGAATCTTTACTATCCACGCCGTTTTTCTACGCGTGTCCTTTGCATAAAGACGCTCCGAGAAGTGAATGCAATATGTTTTGCCTCGATTGTCATCATTGCGCGTTCTGCTTCTATTGCCGATCTGACCTACACCACGATCACCGTGTTATTCAGATTCGGAGATCATCGTACCATGACGTGGTAAGAGTGGCGGAGATCGAGAAAGTTTTGGATATAAGTGAAATCCAAACATATGTGATAAACAGCGCAAGAGTTTTGTTTTTGAATGAGAGGCCTCAACCGAAGAGCTCTGCTAGTAAAGGAGGCTCCCATGTGTGTGAGATTTGTAGTAGATGTCTCTTGGATCCCTTTCGTTTCTGTTCTCTTGGTTGCAAGGTCAAGAACGAGGATTCAAACTTTTACCCGAACGAGCAGAAACACGAGGAGGTGTCGAGAAGAAGGGAAAGAATAGGAAGAAGATTGGGAGAAGAAGAGGAAGAGGAGGAAGAAGAATTGCGTGTAAGGAGAAACCAAGAAGGTGAAATTTACCAAAATCACACGCATCCTTCACATTCAAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA MVIPTWLESLLSTPFFYACPLHKDAPRSECNMFCLDCHHCAFCFYCRSDLHHDHRVIQIRRSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGSHVCEICSRCLLDPFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEELRVRRNQEGEIYQNHTHPSHSNSRRRKGIPQRAPF Homology
BLAST of CmaCh12G008080 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 4.3e-27 Identity = 58/130 (44.62%), Postives = 85/130 (65.38%), Query Frame = 0
BLAST of CmaCh12G008080 vs. TAIR 10
Match: AT2G27930.1 (PLATZ transcription factor family protein ) HSP 1 Score: 216.9 bits (551), Expect = 1.6e-56 Identity = 119/211 (56.40%), Postives = 137/211 (64.93%), Query Frame = 0
BLAST of CmaCh12G008080 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein ) HSP 1 Score: 164.5 bits (415), Expect = 9.2e-41 Identity = 96/211 (45.50%), Postives = 123/211 (58.29%), Query Frame = 0
BLAST of CmaCh12G008080 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein ) HSP 1 Score: 161.4 bits (407), Expect = 7.8e-40 Identity = 102/242 (42.15%), Postives = 137/242 (56.61%), Query Frame = 0
BLAST of CmaCh12G008080 vs. TAIR 10
Match: AT1G21000.2 (PLATZ transcription factor family protein ) HSP 1 Score: 161.4 bits (407), Expect = 7.8e-40 Identity = 102/242 (42.15%), Postives = 137/242 (56.61%), Query Frame = 0
BLAST of CmaCh12G008080 vs. TAIR 10
Match: AT1G76590.1 (PLATZ transcription factor family protein ) HSP 1 Score: 159.1 bits (401), Expect = 3.9e-39 Identity = 104/239 (43.51%), Postives = 133/239 (55.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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