CmaCh12G001190 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G001190
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr12: 489451 .. 491278 (-)
RNA-Seq Expression	CmaCh12G001190
Synteny	CmaCh12G001190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAACCCTAAAAACCCCATTTTTGTGCCACCATTTTCACTTGTGCTCAAACAATCAAAGATGGGTTTTGTTAGGTTTGCTTGCTTTTTGCTGGTTGTTCTTCCAATTACATCACTTTCCATCATGAAGTTTCATCGAGGTCTCTATCCTTCATTCATTTCCTTACGTAAATTTAGAAGCGGGTTTTCTTCCATTTAGTCGAGATTGAACTCGAATCAATTGAATTATGTTTGTAGCTCACGTTTGAATCGATTTGATAATATAATGCTAGTTTTGTTGCACTTTATAGCCTTACATAGACTAGTAGACTGTTAACGGGTTTTCTTGTAGGGTTAGGATTACCTGTTTTCACTCCTTGAAAACGAAATTTGACTTTGTCTAAGAGCTCTATATCTTCTAATGAATGCCCATGTTTTCTTTCTTTTCGTTTTAGGTTGAGAATACAAAGATGTACCTCAAACTCGAGATAGTTTTATTAAGTAAATCAATATAAACCCTTTTTATCGTAGGGTTAGGTTACCTGTTTTCACTTCTCGAAGACGAAATCTAACTTTGTTTACGAGCTCTACATCTTCTAATGAACACCCATGTTTTCTTTCTTTTCGGTTTAGGTTTAGAATACAAAGATGTACCTCAAACTCGAGATAGTTTTATTAAGTAAATCAATATAAACCCTTTTTATCGTAGGGTTAGGTTACCTGTTTTCACTTCTCGAAGACGAAATCTAACTTTGTTTACGAGCTCTACATCTTCTAATGAACACCCATGTTTTCTTTCTTTTCGGTTTAGGTTTAGAATACAAAGATGTACCTCAAACTCGAGATAGTTTTATTAAGTAAATCAATATAAACCCTTTTTATAGAATACAAAGATGTACCTCAAACTCGAGATAGTTTTATTAAGTAAATCAATATAAACCCTTTTTATCGTAGGGTTAGGTTACCTGTAAACTCGAGATAGTTTTATTAAGTAAATCAATATAAACCCTTTTTATCGTAGGGTTAGGTTACCTGTTTTCACTTCTCGAAGACGAAATCTAACTTTGTTTACGAGCTCTACATCTTCTAATGAACATCCATGTTTTCTTTCTTTTCGGTTTAGGTTTAGAATACAAAGATGTACCTCAAACTCGAGATAGTTTTATTAAGTAAATCAATATAAATCCTTCATCGTAGGGGTTAGGTAACCTGTTTTCACTTCTCGAAGACAAAATCTAACTTTGTTTAAGAGCTCTACATCTTCTAATGAATACCCATGTTTTCTTTCTTTTCGGTTTAAGTTTAGAATACAAAGATGTAGCTCAAACTCAAGATAGTTTTGCTAAGTAAATCAATATAAATCCTTCATCGTAGGGTTAGGTAACCTGTTTTCACTTCTCGAAGACAAAATCTAACTTTGTTTAAGAGCTCTACATCTTCTAATGAATACCCATGTCTTCTTTCTTTTCGTTCTAGGTTTAGAATACAAAGACGTAGCTCAAGCCCGAGATAGTTTTGCTTCACATGAAAAGGTACGTGAATATCTACCCTAATTTGACTCGAGGATTCATGTATATCAATAATCTCGCTCGCTTTTTGTTTAGGAACTTTTGAGCAACAACATTGGAGGAAGAAGAAGATTGGAAGTGCAAGAAGGTATGCCATTGGAAAGTAGCAAGAGCTCAAAAATGGCTGTTCCAAGTTCTTTCAATGGTGAAAATGGCAAGAAGAAGAAGAAGAAATCGGGGAATGGTTCTTCATTAGTTTATGAAAATGCTGATTATTTGACTCATATGCATCACCCACCAAAACATAATTGATGGGAACTTGATGGCTTAGCTTAATGGAGT

mRNA sequence

TTTAACCCTAAAAACCCCATTTTTGTGCCACCATTTTCACTTGTGCTCAAACAATCAAAGATGGGTTTTGTTAGGTTTGCTTGCTTTTTGCTGGTTGTTCTTCCAATTACATCACTTTCCATCATGAAGTTTCATCGAGGTTTAGAATACAAAGACGTAGCTCAAGCCCGAGATAGTTTTGCTTCACATGAAAAGGAACTTTTGAGCAACAACATTGGAGGAAGAAGAAGATTGGAAGTGCAAGAAGGTATGCCATTGGAAAGTAGCAAGAGCTCAAAAATGGCTGTTCCAAGTTCTTTCAATGGTGAAAATGGCAAGAAGAAGAAGAAGAAATCGGGGAATGGTTCTTCATTAGTTTATGAAAATGCTGATTATTTGACTCATATGCATCACCCACCAAAACATAATTGATGGGAACTTGATGGCTTAGCTTAATGGAGT

Coding sequence (CDS)

ATGGGTTTTGTTAGGTTTGCTTGCTTTTTGCTGGTTGTTCTTCCAATTACATCACTTTCCATCATGAAGTTTCATCGAGGTTTAGAATACAAAGACGTAGCTCAAGCCCGAGATAGTTTTGCTTCACATGAAAAGGAACTTTTGAGCAACAACATTGGAGGAAGAAGAAGATTGGAAGTGCAAGAAGGTATGCCATTGGAAAGTAGCAAGAGCTCAAAAATGGCTGTTCCAAGTTCTTTCAATGGTGAAAATGGCAAGAAGAAGAAGAAGAAATCGGGGAATGGTTCTTCATTAGTTTATGAAAATGCTGATTATTTGACTCATATGCATCACCCACCAAAACATAATTGA

Protein sequence

MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDVAQARDSFASHEKELLSNNIGGRRRLEVQEGMPLESSKSSKMAVPSSFNGENGKKKKKKSGNGSSLVYENADYLTHMHHPPKHN

Homology

[Close]

BLAST of CmaCh12G001190 vs. ExPASy TrEMBL
Match: A0A6J1KPF0 (uncharacterized protein LOC111496054 OS=Cucurbita maxima OX=3661 GN=LOC111496054 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.6e-56
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDVAQARDSFASHEKELLSNNIGGRRRLEV 60
           MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDVAQARDSFASHEKELLSNNIGGRRRLEV
Sbjct: 1   MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDVAQARDSFASHEKELLSNNIGGRRRLEV 60

Query: 61  QEGMPLESSKSSKMAVPSSFNGENGKKKKKKSGNGSSLVYENADYLTHMHHPPKHN 117
           QEGMPLESSKSSKMAVPSSFNGENGKKKKKKSGNGSSLVYENADYLTHMHHPPKHN
Sbjct: 61  QEGMPLESSKSSKMAVPSSFNGENGKKKKKKSGNGSSLVYENADYLTHMHHPPKHN 116

[Close]

BLAST of CmaCh12G001190 vs. ExPASy TrEMBL
Match: A0A6J1GIZ1 (uncharacterized protein LOC111454657 OS=Cucurbita moschata OX=3662 GN=LOC111454657 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.3e-51
Identity = 110/117 (94.02%), Postives = 112/117 (95.73%), Query Frame = 0


Query: 1   MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDVAQARDSFASHEKELLSNNIGGRRRLEV 60
           MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDVAQARDSFAS EKEL+SNNIGGRRRLEV
Sbjct: 1   MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDVAQARDSFASREKELVSNNIGGRRRLEV 60

Query: 61  QEGMPLESSKSSKMAVPSSFNGENGKKKKKKS-GNGSSLVYENADYLTHMHHPPKHN 117
           +EGMPLE SKSSKMAV SSFNGENGKKKKKK  GNGSSLVYENADYLTHMHHPPKHN
Sbjct: 61  KEGMPLERSKSSKMAVSSSFNGENGKKKKKKKLGNGSSLVYENADYLTHMHHPPKHN 117

[Close]

BLAST of CmaCh12G001190 vs. ExPASy TrEMBL
Match: A0A1S3BDD4 (uncharacterized protein LOC103488445 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488445 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.0e-16
Identity = 71/139 (51.08%), Postives = 85/139 (61.15%), Query Frame = 0


Query: 1   MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDVAQARDSFASHEKELLSNNIGGRR-RLE 60
           M  VRFACFLLVVLP+TSLSI+KFH+  E KD A+ R      E  L +NNIGGRR  + 
Sbjct: 1   MACVRFACFLLVVLPVTSLSIIKFHQ-QEDKDAAEDRVGSLKME-PLRNNNIGGRRLGVL 60

Query: 61  VQEGMPLESSKS----------SKMAVPSSFNGENGKKK-----------KKKSGNGSS- 117
            +E M +E+SKS          S M   S+ N ENGKKK           KK   +GS+ 
Sbjct: 61  NKELMEMENSKSFGKNGSKEKTSNMVFSSAANEENGKKKNDKKKVSSLETKKMGISGSTV 120

[Close]

BLAST of CmaCh12G001190 vs. ExPASy TrEMBL
Match: A0A1S3BDI1 (uncharacterized protein LOC103488445 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488445 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 2.6e-16
Identity = 70/140 (50.00%), Postives = 83/140 (59.29%), Query Frame = 0


Query: 1   MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDVAQARDSFASHEKELLSNNIGGRRRLEV 60
           M  VRFACFLLVVLP+TSLSI+KFH+    +D   A D   S + E L NN  G RRL V
Sbjct: 1   MACVRFACFLLVVLPVTSLSIIKFHQ----QDKDAAEDRVGSLKMEPLRNNNIGGRRLGV 60

Query: 61  --QEGMPLESSKS----------SKMAVPSSFNGENGKKK-----------KKKSGNGSS 117
             +E M +E+SKS          S M   S+ N ENGKKK           KK   +GS+
Sbjct: 61  LNKELMEMENSKSFGKNGSKEKTSNMVFSSAANEENGKKKNDKKKVSSLETKKMGISGST 120

[Close]

BLAST of CmaCh12G001190 vs. ExPASy TrEMBL
Match: A0A0A0KHA3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G401420 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.2e-08
Identity = 44/91 (48.35%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 47  LLSNNIGGRRRLEVQEGMPLESSKS----------SKMAVPSSFNGENGKKKKKKSG--- 106
           L +NNIGGRR    +E M +E+SKS          S M   S+ N ENGKKK KK     
Sbjct: 4   LRNNNIGGRRLGAAKEFMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKEVSS 63

Query: 107 --------NGSSLVYENADYLTHMHHPPKHN 117
                   +GS++VY NADYLT+MHHPPKHN
Sbjct: 64  LETKKMGISGSTVVYNNADYLTYMHHPPKHN 94

[Close]

BLAST of CmaCh12G001190 vs. NCBI nr
Match: XP_023002074.1 (uncharacterized protein LOC111496054 [Cucurbita maxima])

HSP 1 Score: 227.6 bits (579), Expect = 5.4e-56
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDVAQARDSFASHEKELLSNNIGGRRRLEV 60
           MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDVAQARDSFASHEKELLSNNIGGRRRLEV
Sbjct: 1   MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDVAQARDSFASHEKELLSNNIGGRRRLEV 60

Query: 61  QEGMPLESSKSSKMAVPSSFNGENGKKKKKKSGNGSSLVYENADYLTHMHHPPKHN 117
           QEGMPLESSKSSKMAVPSSFNGENGKKKKKKSGNGSSLVYENADYLTHMHHPPKHN
Sbjct: 61  QEGMPLESSKSSKMAVPSSFNGENGKKKKKKSGNGSSLVYENADYLTHMHHPPKHN 116

[Close]

BLAST of CmaCh12G001190 vs. NCBI nr
Match: KAG7020185.1 (hypothetical protein SDJN02_16868, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 213.4 bits (542), Expect = 1.0e-51
Identity = 109/116 (93.97%), Postives = 111/116 (95.69%), Query Frame = 0


Query: 1   MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDVAQARDSFASHEKELLSNNIGGRRRLEV 60
           MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDV Q RDSFAS EKEL+SNNIGGRRRLEV
Sbjct: 1   MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDVVQTRDSFASREKELVSNNIGGRRRLEV 60

Query: 61  QEGMPLESSKSSKMAVPSSFNGENGKKKKKKSGNGSSLVYENADYLTHMHHPPKHN 117
           +EGMPLESSKSSKMAV SSFNGENGKKKKKK GNGSSLVYENADYLTHMHHPPKHN
Sbjct: 61  KEGMPLESSKSSKMAVSSSFNGENGKKKKKKLGNGSSLVYENADYLTHMHHPPKHN 116

[Close]

BLAST of CmaCh12G001190 vs. NCBI nr
Match: XP_022951917.1 (uncharacterized protein LOC111454657 [Cucurbita moschata])

HSP 1 Score: 210.7 bits (535), Expect = 6.8e-51
Identity = 110/117 (94.02%), Postives = 112/117 (95.73%), Query Frame = 0


Query: 1   MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDVAQARDSFASHEKELLSNNIGGRRRLEV 60
           MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDVAQARDSFAS EKEL+SNNIGGRRRLEV
Sbjct: 1   MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDVAQARDSFASREKELVSNNIGGRRRLEV 60

Query: 61  QEGMPLESSKSSKMAVPSSFNGENGKKKKKKS-GNGSSLVYENADYLTHMHHPPKHN 117
           +EGMPLE SKSSKMAV SSFNGENGKKKKKK  GNGSSLVYENADYLTHMHHPPKHN
Sbjct: 61  KEGMPLERSKSSKMAVSSSFNGENGKKKKKKKLGNGSSLVYENADYLTHMHHPPKHN 117

[Close]

BLAST of CmaCh12G001190 vs. NCBI nr
Match: KAG6585262.1 (hypothetical protein SDJN03_17995, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37
Identity = 85/93 (91.40%), Postives = 87/93 (93.55%), Query Frame = 0


Query: 24  FHRGLEYKDVAQARDSFASHEKELLSNNIGGRRRLEVQEGMPLESSKSSKMAVPSSFNGE 83
           F  GLEYKDV QARDSFAS EKEL+SNNIGGRRRLEV+EGMPLESSKSSKMAV SSFNGE
Sbjct: 9   FVSGLEYKDVVQARDSFASREKELVSNNIGGRRRLEVKEGMPLESSKSSKMAVSSSFNGE 68

Query: 84  NGKKKKKKSGNGSSLVYENADYLTHMHHPPKHN 117
           NGKKKKKK GNGSSLVYENADYLTHMHHPPKHN
Sbjct: 69  NGKKKKKKLGNGSSLVYENADYLTHMHHPPKHN 101

[Close]

BLAST of CmaCh12G001190 vs. NCBI nr
Match: XP_031743130.1 (uncharacterized protein LOC105435861 isoform X1 [Cucumis sativus])

HSP 1 Score: 110.9 bits (276), Expect = 7.3e-21
Identity = 74/138 (53.62%), Postives = 89/138 (64.49%), Query Frame = 0


Query: 1   MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDVAQARDSFASHEKELL-SNNIGGRRRLE 60
           M F+RFACFLLVVLP+TSLSI+KFH+  E KDVA+  D   S + ELL +NNIGGRR   
Sbjct: 1   MAFLRFACFLLVVLPVTSLSIIKFHQ-QEDKDVAE--DRVGSLKMELLRNNNIGGRRLGA 60

Query: 61  VQEGMPLESSKS----------SKMAVPSSFNGENGKKKKKKSG-----------NGSSL 117
            +E M +E+SKS          S M   S+ N ENGKKK KK             +GS++
Sbjct: 61  AKEFMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKEVSSLETKKMGISGSTV 120

The following BLAST results are available for this feature:

BLAST of CmaCh12G001190 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh12G001190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KPF0	2.6e-56	100.00	uncharacterized protein LOC111496054 OS=Cucurbita maxima OX=3661 GN=LOC111496054...	[more]
A0A6J1GIZ1	3.3e-51	94.02	uncharacterized protein LOC111454657 OS=Cucurbita moschata OX=3662 GN=LOC1114546...	[more]
A0A1S3BDD4	2.0e-16	51.08	uncharacterized protein LOC103488445 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BDI1	2.6e-16	50.00	uncharacterized protein LOC103488445 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KHA3	1.2e-08	48.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G401420 PE=4 SV=1	[more]

BLAST of CmaCh12G001190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002074.1	5.4e-56	100.00	uncharacterized protein LOC111496054 [Cucurbita maxima]	[more]
KAG7020185.1	1.0e-51	93.97	hypothetical protein SDJN02_16868, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022951917.1	6.8e-51	94.02	uncharacterized protein LOC111454657 [Cucurbita moschata]	[more]
KAG6585262.1	1.1e-37	91.40	hypothetical protein SDJN03_17995, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_031743130.1	7.3e-21	53.62	uncharacterized protein LOC105435861 isoform X1 [Cucumis sativus]	[more]

BLAST of CmaCh12G001190 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G001190.1	CmaCh12G001190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
molecular_function	GO:0016791	phosphatase activity