CmaCh12G000690 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAAAGGACCCTGGTCTTTGGTGTGCGAACTATGAAAATAGTCATAGCTTGGATAACTAGGAGCGATTAATCGCTGACATGGTCGATGTTTGTTTTTCAGTCGGCTTTGTTCAATTTTCATTCGTTTCTGACAGTAATCCTACTGGGAATTTGTACCTGTACCTATGTGAAGATGCAGTTTCCTGCTATTCTTGAACAGAGAAATGGGTAATTTCTTCATTTCTCTTATGCTGTATACTGCATTGAGATAAATTTAAATAATCAGGTTTCGTGCATGTTGGCTAATTGGTTTTCATTTCATGTTGCTACTTTCTTTTCCTTCTCTCTAACGTAATTGGAACTAATTTGATGCTTGGAGAGACCACCATTCTTTCCTTTACCTCGTAAAATTGAATTTCCTATACAATATGTTAGGTGTTGATTGATTTATTATCATGGTGGTGCTATTGATCACCGACATTGATGTTCTTGGTGTGCGAAATCACTACCTCTTATGTTCGAAATACGATTACATTATAAATTCCATATCTTTTTTAATCGAGTTGTTCATCTGACAGGTTCCGTGGCTTCTTTTGGAAAGCAGCTAGAATAGGTAGGATTCTTGGTTAAATTTGCACAATTGCTCTATTGCATGAAAATATTTTTCTGGAACAATTTATTCATAAAACTGTAGAACATCTTAACTCTTTCTTTCTTCTTTTCTCTTTGGTTCTTCCAGCATTCGTCTCTCTTAATGAGACTGAATTTCTGATGTATTGCACCCAAAAAAAGTATTTAGCTTCTTTATTATTAAAAAAAACTCAGTAGCTTTTCGGCCTTTTAGATTTCTCTTGTTCATATTCGTATTTATATGCACAATCATTTGGCAAGAATAACAGTCATTATTATCTGACGGGGTGATGTTCTGTTTGTGAATCAGGTGAACGTTTGAGTCCTTGGGTAGCTGTGGGGTGCTTCTCAATGGGAGTCTCAATAATTTTCTTCTGAGCTATGCCTATATTCCCTGTTTTGTGGTTTATTTAGCATGTGTGTGCCTTACAGTCTTTATTTTAGTAAGAGGGTCTTTGAAGTTAGATTTCTGTAGTGACATGGTTGAAAGCTATTTAAATCCATTTATAAATACACGAGCATTCCATTACAAGTTGTTTTGCTTGCTATGCATCCTCAAAACTGCCAAAGAGGAAGATCATTGTTGTGTTACATTTCTCATCAGAAAACAAAAGAGTTTTGTTTTCTTTTGTGCATTATACTTCTACTTAAGACACATACCACTGATGTTCTATCACTTGAGGTAGGCAGCAGTCTAGATAGTTGTTGAG ATGTCGGCTTTGTTCAATTTTCATTCGTTTCTGACAGTAATCCTACTGGGAATTTGTACCTGTACCTATGTGAAGATGCAGTTTCCTGCTATTCTTGAACAGAGAAATGGGTTCCGTGGCTTCTTTTGGAAAGCAGCTAGAATAGGTGAACGTTTGAGTCCTTGGGTAGCTGTGGGGTGCTTCTCAATGGGAGTCTCAATAATTTTCTTCTGAGCTATGCCTATATTCCCTGTTTTGTGGTTTATTTAGCATGTGTGTGCCTTACAGTCTTTATTTTAGTAAGAGGGTCTTTGAAGTTAGATTTCTGTAGTGACATGGTTGAAAGCTATTTAAATCCATTTATAAATACACGAGCATTCCATTACAAGTTGTTTTGCTTGCTATGCATCCTCAAAACTGCCAAAGAGGAAGATCATTGTTGTGTTACATTTCTCATCAGAAAACAAAAGAGTTTTGTTTTCTTTTGTGCATTATACTTCTACTTAAGACACATACCACTGATGTTCTATCACTTGAGGTAGGCAGCAGTCTAGATAGTTGTTGAG ATGTCGGCTTTGTTCAATTTTCATTCGTTTCTGACAGTAATCCTACTGGGAATTTGTACCTGTACCTATGTGAAGATGCAGTTTCCTGCTATTCTTGAACAGAGAAATGGGTTCCGTGGCTTCTTTTGGAAAGCAGCTAGAATAGGTGAACGTTTGAGTCCTTGGGTAGCTGTGGGGTGCTTCTCAATGGGAGTCTCAATAATTTTCTTCTGA MSALFNFHSFLTVILLGICTCTYVKMQFPAILEQRNGFRGFFWKAARIGERLSPWVAVGCFSMGVSIIFF Homology
BLAST of CmaCh12G000690 vs. ExPASy Swiss-Prot
Match: Q9VWH8 (Protein kish OS=Drosophila melanogaster OX=7227 GN=ksh PE=3 SV=2) HSP 1 Score: 88.6 bits (218), Expect = 3.1e-17 Identity = 40/71 (56.34%), Postives = 53/71 (74.65%), Query Frame = 0
BLAST of CmaCh12G000690 vs. ExPASy Swiss-Prot
Match: Q9CR64 (Protein kish-A OS=Mus musculus OX=10090 GN=Tmem167a PE=1 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.3e-15 Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 0
BLAST of CmaCh12G000690 vs. ExPASy Swiss-Prot
Match: Q148I3 (Protein kish-A OS=Bos taurus OX=9913 GN=TMEM167A PE=3 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.7e-15 Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 0
BLAST of CmaCh12G000690 vs. ExPASy Swiss-Prot
Match: Q5BJC2 (Protein kish-A OS=Danio rerio OX=7955 GN=tmem167a PE=3 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.7e-15 Identity = 40/70 (57.14%), Postives = 52/70 (74.29%), Query Frame = 0
BLAST of CmaCh12G000690 vs. ExPASy Swiss-Prot
Match: Q8TBQ9 (Protein kish-A OS=Homo sapiens OX=9606 GN=TMEM167A PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.7e-15 Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 0
BLAST of CmaCh12G000690 vs. ExPASy TrEMBL
Match: A0A6J1KKJ8 (Protein kish OS=Cucurbita maxima OX=3661 GN=LOC111496111 PE=3 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 2.7e-32 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
BLAST of CmaCh12G000690 vs. ExPASy TrEMBL
Match: A0A6J1GJV2 (Protein kish OS=Cucurbita moschata OX=3662 GN=LOC111454546 PE=3 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 6.0e-32 Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 0
BLAST of CmaCh12G000690 vs. ExPASy TrEMBL
Match: A0A6J1HB53 (Protein kish OS=Cucurbita moschata OX=3662 GN=LOC111462406 PE=3 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.0e-31 Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0
BLAST of CmaCh12G000690 vs. ExPASy TrEMBL
Match: A0A0A0KGV9 (Protein kish OS=Cucumis sativus OX=3659 GN=Csa_6G365220 PE=3 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.0e-31 Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0
BLAST of CmaCh12G000690 vs. ExPASy TrEMBL
Match: A0A6J1BQQ0 (Protein kish OS=Momordica charantia OX=3673 GN=LOC111004584 PE=3 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.0e-31 Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0
BLAST of CmaCh12G000690 vs. NCBI nr
Match: XP_023002171.1 (protein kish-like [Cucurbita maxima] >XP_023536957.1 protein kish-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 147.1 bits (370), Expect = 5.6e-32 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
BLAST of CmaCh12G000690 vs. NCBI nr
Match: XP_022951814.1 (protein kish-like [Cucurbita moschata] >KAG6585214.1 Protein kish-A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 146.0 bits (367), Expect = 1.2e-31 Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 0
BLAST of CmaCh12G000690 vs. NCBI nr
Match: XP_004144193.1 (protein kish [Cucumis sativus] >XP_008445493.1 PREDICTED: protein kish isoform X3 [Cucumis melo] >XP_022131327.1 protein kish [Momordica charantia] >XP_022961720.1 protein kish-like [Cucurbita moschata] >XP_022961721.1 protein kish-like [Cucurbita moschata] >XP_023545685.1 protein kish-like [Cucurbita pepo subsp. pepo] >XP_023545686.1 protein kish-like [Cucurbita pepo subsp. pepo] >XP_038884397.1 protein kish [Benincasa hispida] >KAG6598616.1 Protein kish-A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 145.2 bits (365), Expect = 2.1e-31 Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0
BLAST of CmaCh12G000690 vs. NCBI nr
Match: KAG7020134.1 (Protein kish-A [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 144.1 bits (362), Expect = 4.7e-31 Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of CmaCh12G000690 vs. NCBI nr
Match: XP_034920218.1 (protein kish-like [Populus alba] >XP_034920227.1 protein kish-like [Populus alba] >XP_034920236.1 protein kish-like [Populus alba]) HSP 1 Score: 142.9 bits (359), Expect = 1.0e-30 Identity = 66/70 (94.29%), Postives = 70/70 (100.00%), Query Frame = 0
BLAST of CmaCh12G000690 vs. TAIR 10
Match: AT5G20165.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1242 (InterPro:IPR009653); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 134.0 bits (336), Expect = 4.5e-32 Identity = 62/70 (88.57%), Postives = 66/70 (94.29%), Query Frame = 0
BLAST of CmaCh12G000690 vs. TAIR 10
Match: AT5G20165.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1242 (InterPro:IPR009653); Has 285 Blast hits to 285 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 142; Fungi - 72; Plants - 44; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). ) HSP 1 Score: 94.7 bits (234), Expect = 3.1e-20 Identity = 46/57 (80.70%), Postives = 49/57 (85.96%), Query Frame = 0
BLAST of CmaCh12G000690 vs. TAIR 10
Match: AT5G20165.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1242 (InterPro:IPR009653). ) HSP 1 Score: 81.6 bits (200), Expect = 2.7e-16 Identity = 46/80 (57.50%), Postives = 49/80 (61.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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