CmaCh11G019090 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G019090
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	E3 ubiquitin-protein ligase EL5
Location	Cma_Chr11: 12620785 .. 12622938 (-)
RNA-Seq Expression	CmaCh11G019090
Synteny	CmaCh11G019090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGAAAAAGGACGGATAAACGATGATGGCAAGGAGGAATATATATTCTCACTTGGATTAATTATCCATCTTCAAGCAGTGAAGGAGCTATAAAATCCCAAACACTCGAAACCAACAACTTGATATCTAAGAGATTAAAGACGAAACTTCTGCAAAATGAGCAGACGTTCTACTAATTTTCCTCCAGGACTATGGCGGGCTAGAAGGGAATATGATCGCCAGAGATATAACACAAATGATTCAAACCGTATGAGCTCCACATCGCCACACCCTCAACCATTTCAGGTCAGCAGGTTAATAATTCTTTTGTTTTGCAATGAACTATTATCCTATAATATTATTTGCAGGCGGTAAAAAGAACACATGTAAATCAAATCAAATTCCATATGAATAGTTCACCTAGTTTTTCTCAGAAATGTGTTAGTAGGAAAGAAGCTAAAGAGATTGTAACAATCGTATACCTCATTGTTCATGTGCTTTCAGAATTCATCTAGAGATACAGAGCCAATTCCATCGCGGCCTACTAGGGGGATAGATCCAGTTCCATCTCGGCCTACTAGGGAGCTAGATCCAATTCCATGGCGGCCTACCGGGGGAGCAATGATTGCAAGATTGTTAGAAATTGTCGGGTAATCAGATAACTCAAAAACTTAGTAGATTTTGTTAGGTGTTGTTTGGTGTTTTGCACTGAATTATATGCAATCCGAAGAAACTGATATTGCAGATTCATTTCATATGATGTGAAATTAAAGAATTAGAGGCCAAGCAAAGTTTGTGGTATATTGCCTGAAAATAACATGAACTAGTATCTAACTCAGTAAGATAACTTGACAGAGCATTCAGAAGTACATGAATTTCACTAATGGAAGAAATTGAGGAAACAAATCATGCAAATTATGAAGTGTCAGAAATGTGACTGAGCTCCAGTTCCTCCTCAGCTGGAGACTGTTTCGTTGGAGATTCTTTTACACAAGGGAGTTCAACAAGATTCAACACTCTTAACGCATTAGGCATAAATTTGTTCACCAATAATCTCTATTTACAAGTTGCAGGGAAAACGAATAATGTCATTCTCATTCATTTGATTGAATTGCTTATAATATATAGCACAGCATTCAAATTTTGTCATGACCAACATCGAAATTCTTGAGAATATCAGTTAATTTCAGAGAAAATATACTTACATTGCTCTCATATCCTGCAAGTAAAATCCATATCCTCCATAGTGTGTTGATGTGATTCATTCACTTTTTGAGAAATTTTCAGTCAGCTAGAAGATCCACCAGCCATAGTCAGAATCATTACCCACTCCAGACCGAGGCAGATCGAGGCCAGCTCAAGACCGGCAGAACTGTACAGGCCAACTCCAAGATCCGAAGGAAACTCCACGCTAACATCTGAAGAACAAAATATGGCGCTGAATAAGCTCAAGAAAAAAGTCTATGATCCTCCAAACAACGCAAGTAGGAGAATAAGCTTCTATTACAGAGAGAATAACAGGAGAAATTACAATGAAAGGAGAAACGGTGAAAATGATGAAGACGGCAAGAGATGCGCCGTTTGCCTTGAAGATTTCCAGCCGAAAGAGGAAGTGATGACGACGCCCTGCAACCATATGTTTCACGAAGAATGCATAGTGCCATGGGTGAAGAGCCATGGCCAATGTCCGAATTGCAGATTCACCTTGTTCGAACGAACAGTGCGAAGAGAAGCTTCGTCCAACAACACTGCATCGATTGCGTCGGGTAGTAACCTAGTCGACGACGAGCTCGTGTACTTAATACGAGCCATGGAAGATTCTCTGATGCTGCGAAATCTGACCGGATTGTGGGGAGAATGAGGCGCCATCTCGAATTTCCTCTGAAATCAACATGATAAATGCCAAAAAAAATTTCAAGGATTGATGAAATACAATCTCCAAAAATTATTGTTGCTCTTTGAACATGAAATAACTCGACGTGTGAGCTCGATGTGACCATGAATGCTCCTCTCGCCGATGGCGTTTTCGATCGATTAAGCTTCTACTTGATCTTGGCAGTATAATTCTTTGCTAGAATGTGCTGATCATGAATCATTATATATTAAAATAAAATCCTTGGCGCCAAATTTCCAAATTATTTTTCCTCCCATTTTAAAATCTTGCGAAATTTTT

mRNA sequence

AAAAAGAAAAAGGACGGATAAACGATGATGGCAAGGAGGAATATATATTCTCACTTGGATTAATTATCCATCTTCAAGCAGTGAAGGAGCTATAAAATCCCAAACACTCGAAACCAACAACTTGATATCTAAGAGATTAAAGACGAAACTTCTGCAAAATGAGCAGACGTTCTACTAATTTTCCTCCAGGACTATGGCGGGCTAGAAGGGAATATGATCGCCAGAGATATAACACAAATGATTCAAACCGTATGAGCTCCACATCGCCACACCCTCAACCATTTCAGAATTCATCTAGAGATACAGAGCCAATTCCATCGCGGCCTACTAGGGGGATAGATCCAGTTCCATCTCGGCCTACTAGGGAGCTAGATCCAATTCCATGGCGGCCTACCGGGGGAGCAATGATTGCAAGATTGTTAGAAATTGTCGGTCAGCTAGAAGATCCACCAGCCATAGTCAGAATCATTACCCACTCCAGACCGAGGCAGATCGAGGCCAGCTCAAGACCGGCAGAACTGTACAGGCCAACTCCAAGATCCGAAGGAAACTCCACGCTAACATCTGAAGAACAAAATATGGCGCTGAATAAGCTCAAGAAAAAAGTCTATGATCCTCCAAACAACGCAAGTAGGAGAATAAGCTTCTATTACAGAGAGAATAACAGGAGAAATTACAATGAAAGGAGAAACGGTGAAAATGATGAAGACGGCAAGAGATGCGCCGTTTGCCTTGAAGATTTCCAGCCGAAAGAGGAAGTGATGACGACGCCCTGCAACCATATGTTTCACGAAGAATGCATAGTGCCATGGGTGAAGAGCCATGGCCAATGTCCGAATTGCAGATTCACCTTGTTCGAACGAACAGTGCGAAGAGAAGCTTCGTCCAACAACACTGCATCGATTGCGTCGGGTAGTAACCTAGTCGACGACGAGCTCGTGTACTTAATACGAGCCATGGAAGATTCTCTGATGCTGCGAAATCTGACCGGATTGTGGGGAGAATGAGGCGCCATCTCGAATTTCCTCTGAAATCAACATGATAAATGCCAAAAAAAATTTCAAGGATTGATGAAATACAATCTCCAAAAATTATTGTTGCTCTTTGAACATGAAATAACTCGACGTGTGAGCTCGATGTGACCATGAATGCTCCTCTCGCCGATGGCGTTTTCGATCGATTAAGCTTCTACTTGATCTTGGCAGTATAATTCTTTGCTAGAATGTGCTGATCATGAATCATTATATATTAAAATAAAATCCTTGGCGCCAAATTTCCAAATTATTTTTCCTCCCATTTTAAAATCTTGCGAAATTTTT

Coding sequence (CDS)

ATGAGCAGACGTTCTACTAATTTTCCTCCAGGACTATGGCGGGCTAGAAGGGAATATGATCGCCAGAGATATAACACAAATGATTCAAACCGTATGAGCTCCACATCGCCACACCCTCAACCATTTCAGAATTCATCTAGAGATACAGAGCCAATTCCATCGCGGCCTACTAGGGGGATAGATCCAGTTCCATCTCGGCCTACTAGGGAGCTAGATCCAATTCCATGGCGGCCTACCGGGGGAGCAATGATTGCAAGATTGTTAGAAATTGTCGGTCAGCTAGAAGATCCACCAGCCATAGTCAGAATCATTACCCACTCCAGACCGAGGCAGATCGAGGCCAGCTCAAGACCGGCAGAACTGTACAGGCCAACTCCAAGATCCGAAGGAAACTCCACGCTAACATCTGAAGAACAAAATATGGCGCTGAATAAGCTCAAGAAAAAAGTCTATGATCCTCCAAACAACGCAAGTAGGAGAATAAGCTTCTATTACAGAGAGAATAACAGGAGAAATTACAATGAAAGGAGAAACGGTGAAAATGATGAAGACGGCAAGAGATGCGCCGTTTGCCTTGAAGATTTCCAGCCGAAAGAGGAAGTGATGACGACGCCCTGCAACCATATGTTTCACGAAGAATGCATAGTGCCATGGGTGAAGAGCCATGGCCAATGTCCGAATTGCAGATTCACCTTGTTCGAACGAACAGTGCGAAGAGAAGCTTCGTCCAACAACACTGCATCGATTGCGTCGGGTAGTAACCTAGTCGACGACGAGCTCGTGTACTTAATACGAGCCATGGAAGATTCTCTGATGCTGCGAAATCTGACCGGATTGTGGGGAGAATGA

Protein sequence

MSRRSTNFPPGLWRARREYDRQRYNTNDSNRMSSTSPHPQPFQNSSRDTEPIPSRPTRGIDPVPSRPTRELDPIPWRPTGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAELYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRRNYNERRNGENDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRREASSNNTASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWGE

Homology

[Close]

BLAST of CmaCh11G019090 vs. ExPASy Swiss-Prot
Match: Q9Y4L5 (E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens OX=9606 GN=RNF115 PE=1 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 1.0e-10
Identity = 31/75 (41.33%), Postives = 41/75 (54.67%), Query Frame = 0


Query: 180 ENDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRR 239
           E  + G  C VC ED+  +EEV   PCNH FH  CIVPW++ H  CP CR +L      R
Sbjct: 220 EQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTR 279

Query: 240 EASSNNTASIASGSN 255
           ++ S   ++    SN
Sbjct: 280 QSQSTEASASNRFSN 294

[Close]

BLAST of CmaCh11G019090 vs. ExPASy Swiss-Prot
Match: Q9D0C1 (E3 ubiquitin-protein ligase RNF115 OS=Mus musculus OX=10090 GN=Rnf115 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.7e-10
Identity = 32/70 (45.71%), Postives = 41/70 (58.57%), Query Frame = 0


Query: 180 ENDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTL-FERTVR 239
           E    G  C VC ED+  +E+V   PCNH FH  CIVPW++ H  CP CR +L  E + R
Sbjct: 221 EQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTR 280

Query: 240 REASSNNTAS 249
           +  SS  +AS
Sbjct: 281 QTQSSEASAS 290

[Close]

BLAST of CmaCh11G019090 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.0e-10
Identity = 30/68 (44.12%), Postives = 38/68 (55.88%), Query Frame = 0


Query: 188 CAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRREASSNNTA 247
           CAVC E F+ + E    PC H+FH++CIVPW+     CP CRF L     RR  S+NN  
Sbjct: 199 CAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEPNRR--SNNNEE 258

Query: 248 SIASGSNL 256
             A G  +
Sbjct: 259 DNAVGMTI 264

[Close]

BLAST of CmaCh11G019090 vs. ExPASy Swiss-Prot
Match: Q91YL2 (E3 ubiquitin-protein ligase RNF126 OS=Mus musculus OX=10090 GN=Rnf126 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.1e-10
Identity = 32/84 (38.10%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 180 ENDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRR 239
           E+   G  C VC ED+   E V   PCNH+FH+ CIVPW++ H  CP CR +L  +    
Sbjct: 223 EHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNTAT 282

Query: 240 E---------ASSNNTASIASGSN 255
                     +SS++++S +S SN
Sbjct: 283 NPPGLTGVGFSSSSSSSSSSSPSN 306

[Close]

BLAST of CmaCh11G019090 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.1e-10
Identity = 25/73 (34.25%), Postives = 41/73 (56.16%), Query Frame = 0


Query: 187 RCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRREASSNNT 246
           +CAVC+++F+   +V   PC H+FH++C++PW++ H  CP CRF L       E  S  +
Sbjct: 215 QCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQGS 274

Query: 247 ASIASGSNLVDDE 260
                G   V+ +
Sbjct: 275 QGSGDGQGSVEGQ 287

[Close]

BLAST of CmaCh11G019090 vs. ExPASy TrEMBL
Match: A0A6J1JPC8 (E3 ubiquitin-protein ligase EL5 OS=Cucurbita maxima OX=3661 GN=LOC111486293 PE=4 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 2.3e-159
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MSRRSTNFPPGLWRARREYDRQRYNTNDSNRMSSTSPHPQPFQNSSRDTEPIPSRPTRGI 60
           MSRRSTNFPPGLWRARREYDRQRYNTNDSNRMSSTSPHPQPFQNSSRDTEPIPSRPTRGI
Sbjct: 1   MSRRSTNFPPGLWRARREYDRQRYNTNDSNRMSSTSPHPQPFQNSSRDTEPIPSRPTRGI 60

Query: 61  DPVPSRPTRELDPIPWRPTGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE 120
           DPVPSRPTRELDPIPWRPTGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE
Sbjct: 61  DPVPSRPTRELDPIPWRPTGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE 120

Query: 121 LYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRRNYNERRNGE 180
           LYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRRNYNERRNGE
Sbjct: 121 LYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRRNYNERRNGE 180

Query: 181 NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRRE 240
           NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRRE
Sbjct: 181 NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRRE 240

Query: 241 ASSNNTASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWGE 283
           ASSNNTASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWGE
Sbjct: 241 ASSNNTASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWGE 282

[Close]

BLAST of CmaCh11G019090 vs. ExPASy TrEMBL
Match: A0A6J1ES11 (E3 ubiquitin-protein ligase EL5 OS=Cucurbita moschata OX=3662 GN=LOC111437204 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 1.6e-155
Identity = 276/282 (97.87%), Postives = 276/282 (97.87%), Query Frame = 0


Query: 1   MSRRSTNFPPGLWRARREYDRQRYNTNDSNRMSSTSPHPQPFQNSSRDTEPIPSRPTRGI 60
           MSRR TNFPPGLWRARREYD QRYNTNDSNRMSSTSPHPQPFQNSSRDT PIPSRPT GI
Sbjct: 1   MSRRPTNFPPGLWRARREYDHQRYNTNDSNRMSSTSPHPQPFQNSSRDTNPIPSRPTGGI 60

Query: 61  DPVPSRPTRELDPIPWRPTGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE 120
           DPVPSRPTRELDPIPWRPTGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE
Sbjct: 61  DPVPSRPTRELDPIPWRPTGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE 120

Query: 121 LYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRRNYNERRNGE 180
           LYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRRNYNER NGE
Sbjct: 121 LYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRRNYNERSNGE 180

Query: 181 NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRRE 240
           NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRRE
Sbjct: 181 NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRRE 240

Query: 241 ASSNNTASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWGE 283
           ASSNN ASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWGE
Sbjct: 241 ASSNNAASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWGE 282

[Close]

BLAST of CmaCh11G019090 vs. ExPASy TrEMBL
Match: A0A1S3C054 (E3 ubiquitin-protein ligase RNF12 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495488 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 6.0e-107
Identity = 205/284 (72.18%), Postives = 226/284 (79.58%), Query Frame = 0


Query: 1   MSRRSTNFPPGLWRARREYDRQRYNTNDSNRMSSTSPHPQPFQNSSRDTEPIPSRPTRGI 60
           MSRRSTNFPPG+W+ARREYDRQRYN N+SNR++ST  H Q FQNS               
Sbjct: 1   MSRRSTNFPPGIWQARREYDRQRYNRNESNRVNSTPSHTQSFQNS--------------- 60

Query: 61  DPVPSRPTRELDPIPWRPTGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE 120
                   RE+DP+PWRP G  MI R+L+I    E+PPAIVRIITHSRPRQIEAS  PAE
Sbjct: 61  -------YREIDPVPWRPAGETMITRILDIGSLPEEPPAIVRIITHSRPRQIEASPIPAE 120

Query: 121 LYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRRNYNERRNGE 180
           LY PTPRSEGNSTLTSEEQNMALNKLKKKVYDPP+N SRRI+FYYRENNR NYNER N  
Sbjct: 121 LYSPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPSNTSRRINFYYRENNRVNYNERHNNN 180

Query: 181 NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFE-RTVRR 240
           +DE+GK CAVCLEDFQPKEEVMTTPCNHMFHE+CIVPWVKS+GQCP CRFTLFE RT RR
Sbjct: 181 SDEEGKGCAVCLEDFQPKEEVMTTPCNHMFHEQCIVPWVKSNGQCPVCRFTLFERRTERR 240

Query: 241 EASS--NNTASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWG 282
            ASS  NN  SIA  S+LVDDEL+YLIRAME++LMLRN+   WG
Sbjct: 241 GASSNFNNNVSIAPPSSLVDDELMYLIRAMEEALMLRNVAEFWG 262

[Close]

BLAST of CmaCh11G019090 vs. ExPASy TrEMBL
Match: A0A0A0K1V1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G049220 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 7.9e-107
Identity = 201/284 (70.77%), Postives = 226/284 (79.58%), Query Frame = 0


Query: 1   MSRRSTNFPPGLWRARREYDRQRYNTNDSNRMSSTSPHPQPFQNSSRDTEPIPSRPTRGI 60
           MSRRSTNFPPG+W+ARRE+DRQRYN N+SNR +ST  H Q FQNS               
Sbjct: 1   MSRRSTNFPPGIWQARREHDRQRYNRNESNRTNSTPSHTQSFQNS--------------- 60

Query: 61  DPVPSRPTRELDPIPWRPTGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE 120
                   R++DP+PWRP G  +I R+L+I  + E+PPAIVRIITHSRPRQ+EAS  PAE
Sbjct: 61  -------YRQIDPVPWRPAGETVITRILDIGSRPEEPPAIVRIITHSRPRQLEASPIPAE 120

Query: 121 LYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRRNYNERRNGE 180
           LY PTPRSEGNSTLTSEEQNMALNKLKKKVYDPP+N SRRISFYYRENNR N NER N  
Sbjct: 121 LYSPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPSNTSRRISFYYRENNRVNSNERHNSN 180

Query: 181 NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRRE 240
            DE+GKRCAVCLEDFQPKEEVMTTPCNHMFHE+CIVPWVKSHGQCP CRFTLFERT RR 
Sbjct: 181 GDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEQCIVPWVKSHGQCPVCRFTLFERTERRG 240

Query: 241 ASS---NNTASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWG 282
           ++S   NN+ SIA  S+LVD+ELVYLIRAME++LMLRN+   WG
Sbjct: 241 SASSNFNNSVSIAPPSSLVDEELVYLIRAMEEALMLRNVAEFWG 262

[Close]

BLAST of CmaCh11G019090 vs. ExPASy TrEMBL
Match: A0A5D3C526 (E3 ubiquitin-protein ligase RNF12 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003170 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 3.0e-106
Identity = 204/283 (72.08%), Postives = 226/283 (79.86%), Query Frame = 0


Query: 1   MSRRSTNFPPGLWRARREYDRQRYNTNDSNRMSSTSPHPQPFQNSSRDTEPIPSRPTRGI 60
           MSRRSTNFPPG+W+ARREYDRQRYN N+SNR++ST  H Q FQNS               
Sbjct: 1   MSRRSTNFPPGIWQARREYDRQRYNRNESNRVNSTPSHTQSFQNS--------------- 60

Query: 61  DPVPSRPTRELDPIPWRPTGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE 120
                   RE+DP+PWRP G  MI R+L+I    E+PPAIVRIITHSRPRQIEAS  PAE
Sbjct: 61  -------YREIDPVPWRPAGETMITRILDIGSLPEEPPAIVRIITHSRPRQIEASPIPAE 120

Query: 121 LYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRRNYNERRNGE 180
           LY PTPRSEGNSTLTSEEQNMALNKLKKKVYDPP+N SRRI+FYYRENNR NYNER N  
Sbjct: 121 LYSPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPSNTSRRINFYYRENNRVNYNERHNNN 180

Query: 181 NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFE-RTVRR 240
           +DE+GK CAVCLEDFQPKEEVMTTPCNHMFHE+CIVPWVKS+GQCP CRFTLFE RT RR
Sbjct: 181 SDEEGKGCAVCLEDFQPKEEVMTTPCNHMFHEQCIVPWVKSNGQCPVCRFTLFERRTERR 240

Query: 241 EASS--NNTASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLW 281
            ASS  NN+ SIA  S+LVDDEL+YLIRAME++LMLRN+   W
Sbjct: 241 GASSNFNNSVSIAPPSSLVDDELMYLIRAMEEALMLRNVAEFW 261

[Close]

BLAST of CmaCh11G019090 vs. NCBI nr
Match: XP_022989128.1 (E3 ubiquitin-protein ligase EL5 [Cucurbita maxima])

HSP 1 Score: 571.2 bits (1471), Expect = 4.8e-159
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MSRRSTNFPPGLWRARREYDRQRYNTNDSNRMSSTSPHPQPFQNSSRDTEPIPSRPTRGI 60
           MSRRSTNFPPGLWRARREYDRQRYNTNDSNRMSSTSPHPQPFQNSSRDTEPIPSRPTRGI
Sbjct: 1   MSRRSTNFPPGLWRARREYDRQRYNTNDSNRMSSTSPHPQPFQNSSRDTEPIPSRPTRGI 60

Query: 61  DPVPSRPTRELDPIPWRPTGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE 120
           DPVPSRPTRELDPIPWRPTGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE
Sbjct: 61  DPVPSRPTRELDPIPWRPTGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE 120

Query: 121 LYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRRNYNERRNGE 180
           LYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRRNYNERRNGE
Sbjct: 121 LYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRRNYNERRNGE 180

Query: 181 NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRRE 240
           NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRRE
Sbjct: 181 NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRRE 240

Query: 241 ASSNNTASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWGE 283
           ASSNNTASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWGE
Sbjct: 241 ASSNNTASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWGE 282

[Close]

BLAST of CmaCh11G019090 vs. NCBI nr
Match: XP_022930836.1 (E3 ubiquitin-protein ligase EL5 [Cucurbita moschata] >KAG7022947.1 E3 ubiquitin-protein ligase SDIR1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 558.5 bits (1438), Expect = 3.2e-155
Identity = 276/282 (97.87%), Postives = 276/282 (97.87%), Query Frame = 0


Query: 1   MSRRSTNFPPGLWRARREYDRQRYNTNDSNRMSSTSPHPQPFQNSSRDTEPIPSRPTRGI 60
           MSRR TNFPPGLWRARREYD QRYNTNDSNRMSSTSPHPQPFQNSSRDT PIPSRPT GI
Sbjct: 1   MSRRPTNFPPGLWRARREYDHQRYNTNDSNRMSSTSPHPQPFQNSSRDTNPIPSRPTGGI 60

Query: 61  DPVPSRPTRELDPIPWRPTGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE 120
           DPVPSRPTRELDPIPWRPTGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE
Sbjct: 61  DPVPSRPTRELDPIPWRPTGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE 120

Query: 121 LYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRRNYNERRNGE 180
           LYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRRNYNER NGE
Sbjct: 121 LYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRRNYNERSNGE 180

Query: 181 NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRRE 240
           NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRRE
Sbjct: 181 NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRRE 240

Query: 241 ASSNNTASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWGE 283
           ASSNN ASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWGE
Sbjct: 241 ASSNNAASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWGE 282

[Close]

BLAST of CmaCh11G019090 vs. NCBI nr
Match: XP_023529368.1 (E3 ubiquitin-protein ligase EL5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 558.1 bits (1437), Expect = 4.2e-155
Identity = 275/282 (97.52%), Postives = 277/282 (98.23%), Query Frame = 0


Query: 1   MSRRSTNFPPGLWRARREYDRQRYNTNDSNRMSSTSPHPQPFQNSSRDTEPIPSRPTRGI 60
           MSRRSTNFPPGLWRARREYD QRYNTNDSNRMSSTSPHPQPFQNSSRDT PIP RPT GI
Sbjct: 1   MSRRSTNFPPGLWRARREYDHQRYNTNDSNRMSSTSPHPQPFQNSSRDTNPIPLRPTGGI 60

Query: 61  DPVPSRPTRELDPIPWRPTGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE 120
           DPVPSRPTRELDPIPWRPTGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE
Sbjct: 61  DPVPSRPTRELDPIPWRPTGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE 120

Query: 121 LYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRRNYNERRNGE 180
           +YRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNR+NYNER NGE
Sbjct: 121 MYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRKNYNERSNGE 180

Query: 181 NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRRE 240
           NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRRE
Sbjct: 181 NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRRE 240

Query: 241 ASSNNTASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWGE 283
           ASSNNTASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWGE
Sbjct: 241 ASSNNTASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWGE 282

[Close]

BLAST of CmaCh11G019090 vs. NCBI nr
Match: KAG6589248.1 (ATP-dependent zinc metalloprotease FTSH 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 490.7 bits (1262), Expect = 8.3e-135
Identity = 244/248 (98.39%), Postives = 244/248 (98.39%), Query Frame = 0


Query: 32  MSSTSPHPQPFQNSSRDTEPIPSRPTRGIDPVPSRPTRELDPIPWRPTGGAMIARLLEIV 91
           MSSTSPHPQPFQNSSRDT PIPSRPT GIDPVPSRPTRELDPIPWRPTGGAMIARLLEIV
Sbjct: 1   MSSTSPHPQPFQNSSRDTNPIPSRPTGGIDPVPSRPTRELDPIPWRPTGGAMIARLLEIV 60

Query: 92  GQLEDPPAIVRIITHSRPRQIEASSRPAELYRPTPRSEGNSTLTSEEQNMALNKLKKKVY 151
           GQLEDPPAIVRIITHSRPRQIEASSRPAELYRPTPRSEGNSTLTSEEQNMALNKLKKKVY
Sbjct: 61  GQLEDPPAIVRIITHSRPRQIEASSRPAELYRPTPRSEGNSTLTSEEQNMALNKLKKKVY 120

Query: 152 DPPNNASRRISFYYRENNRRNYNERRNGENDEDGKRCAVCLEDFQPKEEVMTTPCNHMFH 211
           DPPNNASRRISFYYRENNRRNYNER NGENDEDGKRCAVCLEDFQPKEEVMTTPCNHMFH
Sbjct: 121 DPPNNASRRISFYYRENNRRNYNERSNGENDEDGKRCAVCLEDFQPKEEVMTTPCNHMFH 180

Query: 212 EECIVPWVKSHGQCPNCRFTLFERTVRREASSNNTASIASGSNLVDDELVYLIRAMEDSL 271
           EECIVPWVKSHGQCPNCRFTLFERTVRREASSNN ASIASGSNLVDDELVYLIRAMEDSL
Sbjct: 181 EECIVPWVKSHGQCPNCRFTLFERTVRREASSNNAASIASGSNLVDDELVYLIRAMEDSL 240

Query: 272 MLRNLTGL 280
           MLRNLTGL
Sbjct: 241 MLRNLTGL 248

[Close]

BLAST of CmaCh11G019090 vs. NCBI nr
Match: XP_038888228.1 (uncharacterized protein LOC120078088 isoform X1 [Benincasa hispida])

HSP 1 Score: 403.7 bits (1036), Expect = 1.3e-108
Identity = 206/283 (72.79%), Postives = 225/283 (79.51%), Query Frame = 0


Query: 1   MSRRSTNFPPGLWRARREYDRQRYNTNDSNRMSSTSPHPQPFQNSSRDTEPIPSRPTRGI 60
           MSRRSTNFPPG+W+ARREYDRQRYN NDSNR++ST  H   FQNS               
Sbjct: 1   MSRRSTNFPPGIWQARREYDRQRYNRNDSNRINSTPSHTNSFQNS--------------- 60

Query: 61  DPVPSRPTRELDPIPWRPTGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE 120
                   RE+DP+PWRP G  MIAR+L+I    E+PPAIVRIIT SRPRQ+EAS  PAE
Sbjct: 61  -------YREVDPVPWRPAGETMIARILDIGRPREEPPAIVRIITSSRPRQLEASPIPAE 120

Query: 121 LYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRRNYNERRNGE 180
           LY PTPRSEGNSTLTSEEQNMAL KLKK VYDPP+N SRRISFYYRENNR NYNER N  
Sbjct: 121 LYSPTPRSEGNSTLTSEEQNMALTKLKKNVYDPPSNTSRRISFYYRENNRGNYNERNNSN 180

Query: 181 NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRRE 240
           +DE+GKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKS+GQCP CRFTLFERT RR 
Sbjct: 181 SDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTERRG 240

Query: 241 AS--SNNTASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWG 282
           AS  SNNT S A  S+L+DD+L+YLIRAMED+LMLRNL G WG
Sbjct: 241 ASSNSNNTVSTAPPSSLIDDDLMYLIRAMEDALMLRNLAGFWG 261

[Close]

BLAST of CmaCh11G019090 vs. TAIR 10
Match: AT3G58720.1 (RING/U-box superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 5.0e-29
Identity = 73/188 (38.83%), Postives = 107/188 (56.91%), Query Frame = 0


Query: 101 VRIITHSRPRQIEASSRPAELYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNAS-- 160
           +R   + R + +EA  +        P S   S+  + E++  L  L K+ Y+P   ++  
Sbjct: 53  IRNSNNLRRQHLEALRQAVHNQSTRPESSSRSSSQTNEEDEILKHLTKETYNPVPKSTLL 112

Query: 161 RRISFYYRENNRRNYNER--RNGENDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIV 220
           R +S YYR  N  + + R  +N   +ED KRC+VCLEDF+PKE VM TPC HMFHEECIV
Sbjct: 113 RSLSLYYRNKNPGSESSRNTQNLSGEEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIV 172

Query: 221 PWVKSHGQCPNCRFTLFERTVRREASSNNTASIASGSNLVDD---------ELVYLIRAM 276
           PW+K+ GQCP CRF + + T        +++  A+GSNL  D         EL+ ++RAM
Sbjct: 173 PWLKTKGQCPVCRFVILKPT------KQDSSPPANGSNLTGDMTTNDLFTLELLSVVRAM 232

[Close]

BLAST of CmaCh11G019090 vs. TAIR 10
Match: AT3G58720.2 (RING/U-box superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 5.0e-29
Identity = 73/188 (38.83%), Postives = 107/188 (56.91%), Query Frame = 0


Query: 101 VRIITHSRPRQIEASSRPAELYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNAS-- 160
           +R   + R + +EA  +        P S   S+  + E++  L  L K+ Y+P   ++  
Sbjct: 81  IRNSNNLRRQHLEALRQAVHNQSTRPESSSRSSSQTNEEDEILKHLTKETYNPVPKSTLL 140

Query: 161 RRISFYYRENNRRNYNER--RNGENDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIV 220
           R +S YYR  N  + + R  +N   +ED KRC+VCLEDF+PKE VM TPC HMFHEECIV
Sbjct: 141 RSLSLYYRNKNPGSESSRNTQNLSGEEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIV 200

Query: 221 PWVKSHGQCPNCRFTLFERTVRREASSNNTASIASGSNLVDD---------ELVYLIRAM 276
           PW+K+ GQCP CRF + + T        +++  A+GSNL  D         EL+ ++RAM
Sbjct: 201 PWLKTKGQCPVCRFVILKPT------KQDSSPPANGSNLTGDMTTNDLFTLELLSVVRAM 260

[Close]

BLAST of CmaCh11G019090 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 67.4 bits (163), Expect = 2.1e-11
Identity = 30/68 (44.12%), Postives = 38/68 (55.88%), Query Frame = 0


Query: 188 CAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRREASSNNTA 247
           CAVC E F+ + E    PC H+FH++CIVPW+     CP CRF L     RR  S+NN  
Sbjct: 199 CAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEPNRR--SNNNEE 258

Query: 248 SIASGSNL 256
             A G  +
Sbjct: 259 DNAVGMTI 264

[Close]

BLAST of CmaCh11G019090 vs. TAIR 10
Match: AT2G44330.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.7e-11
Identity = 24/55 (43.64%), Postives = 33/55 (60.00%), Query Frame = 0


Query: 178 NGENDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTL 233
           +  +D+    CA+C EDF   E     PCNH++H +CI+PW+ SH  CP CR  L
Sbjct: 86  SASSDDSALPCAICREDFVVGESARRLPCNHLYHNDCIIPWLTSHNSCPLCRVEL 140

[Close]

BLAST of CmaCh11G019090 vs. TAIR 10
Match: AT1G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 3.6e-11
Identity = 28/75 (37.33%), Postives = 44/75 (58.67%), Query Frame = 0


Query: 183 EDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRREA- 242
           E+  +C+VCL+DF+   E    PC H FH +C++PW++ H  CP CR+ L     + ++ 
Sbjct: 218 EETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPADEAKTDSV 277

Query: 243 ---SSNNTASIASGS 254
              S NN +S AS +
Sbjct: 278 TTTSDNNGSSSASAT 292

The following BLAST results are available for this feature:

BLAST of CmaCh11G019090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9Y4L5	1.0e-10	41.33	E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens OX=9606 GN=RNF115 PE=1 SV=2	[more]
Q9D0C1	1.7e-10	45.71	E3 ubiquitin-protein ligase RNF115 OS=Mus musculus OX=10090 GN=Rnf115 PE=1 SV=1	[more]
Q940T5	3.0e-10	44.12	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
Q91YL2	5.1e-10	38.10	E3 ubiquitin-protein ligase RNF126 OS=Mus musculus OX=10090 GN=Rnf126 PE=1 SV=1	[more]
Q8LPN7	5.1e-10	34.25	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]

BLAST of CmaCh11G019090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JPC8	2.3e-159	100.00	E3 ubiquitin-protein ligase EL5 OS=Cucurbita maxima OX=3661 GN=LOC111486293 PE=4...	[more]
A0A6J1ES11	1.6e-155	97.87	E3 ubiquitin-protein ligase EL5 OS=Cucurbita moschata OX=3662 GN=LOC111437204 PE...	[more]
A0A1S3C054	6.0e-107	72.18	E3 ubiquitin-protein ligase RNF12 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A0A0K1V1	7.9e-107	70.77	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G049220 P...	[more]
A0A5D3C526	3.0e-106	72.08	E3 ubiquitin-protein ligase RNF12 isoform X1 OS=Cucumis melo var. makuwa OX=1194...	[more]

BLAST of CmaCh11G019090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989128.1	4.8e-159	100.00	E3 ubiquitin-protein ligase EL5 [Cucurbita maxima]	[more]
XP_022930836.1	3.2e-155	97.87	E3 ubiquitin-protein ligase EL5 [Cucurbita moschata] >KAG7022947.1 E3 ubiquitin-...	[more]
XP_023529368.1	4.2e-155	97.52	E3 ubiquitin-protein ligase EL5 [Cucurbita pepo subsp. pepo]	[more]
KAG6589248.1	8.3e-135	98.39	ATP-dependent zinc metalloprotease FTSH 2, chloroplastic, partial [Cucurbita arg...	[more]
XP_038888228.1	1.3e-108	72.79	uncharacterized protein LOC120078088 isoform X1 [Benincasa hispida]	[more]

BLAST of CmaCh11G019090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58720.1	5.0e-29	38.83	RING/U-box superfamily protein	[more]
AT3G58720.2	5.0e-29	38.83	RING/U-box superfamily protein	[more]
AT5G59550.1	2.1e-11	44.12	zinc finger (C3HC4-type RING finger) family protein	[more]
AT2G44330.1	2.7e-11	43.64	RING/U-box superfamily protein	[more]
AT1G55530.1	3.6e-11	37.33	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 188..228 e-value: 4.2E-8 score: 42.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 187..229 e-value: 7.3E-14 score: 51.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 188..229 score: 13.108904
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 172..247 e-value: 7.5E-21 score: 75.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..137
None	No IPR available	PANTHER	PTHR22765	RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING	coord: 139..277
None	No IPR available	PANTHER	PTHR22765:SF328	ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN	coord: 139..277
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 188..229 e-value: 4.26298E-19 score: 76.5717
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 176..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G019090.1	CmaCh11G019090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
molecular_function	GO:0061630	ubiquitin protein ligase activity