Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTATGTGGGTAAAGCTACAAAGATCTTCATCTTCATTGTCACCATTTTGGTGGTTCTTGGCCTTGTTCTAGCCTTTGGAGTCTTCCGCCACAGCCTCCAAAAACCCCACAAGTGCCTCAGAGATTCCTGTTTTTCTCCTCCAACCGCCTTCCCCAACCCCAATTCCGTCCCTTCCGGCAGCGCCGCCTCCAATCAGCCGCAGAACCCACCAAAACCACCGGATTCCAATCCTAACCCACCACCCCAAAATCCATTTCCGGCTTCTCCGCCTCCGCCTGACGTTGCTTCTCCACCTCCGCCTGCTACCATCCCAACTCCCTTACCACCACCGCCCCCGCAATCCCAATCTCCGCCTCCTCCAGAAACCGCAGCGGCGGCGCCGTTAACTCCGCCCAGTACAACATCGGTGAGTCCGGATCCAATGGAAGCTCAGCTGCGATCCTCGATTCCTAAGACCACTAAGAAGTTCTGA
mRNA sequence
ATGTGTTATGTGGGTAAAGCTACAAAGATCTTCATCTTCATTGTCACCATTTTGGTGGTTCTTGGCCTTGTTCTAGCCTTTGGAGTCTTCCGCCACAGCCTCCAAAAACCCCACAAGTGCCTCAGAGATTCCTGTTTTTCTCCTCCAACCGCCTTCCCCAACCCCAATTCCGTCCCTTCCGGCAGCGCCGCCTCCAATCAGCCGCAGAACCCACCAAAACCACCGGATTCCAATCCTAACCCACCACCCCAAAATCCATTTCCGGCTTCTCCGCCTCCGCCTGACGTTGCTTCTCCACCTCCGCCTGCTACCATCCCAACTCCCTTACCACCACCGCCCCCGCAATCCCAATCTCCGCCTCCTCCAGAAACCGCAGCGGCGGCGCCGTTAACTCCGCCCAGTACAACATCGGTGAGTCCGGATCCAATGGAAGCTCAGCTGCGATCCTCGATTCCTAAGACCACTAAGAAGTTCTGA
Coding sequence (CDS)
ATGTGTTATGTGGGTAAAGCTACAAAGATCTTCATCTTCATTGTCACCATTTTGGTGGTTCTTGGCCTTGTTCTAGCCTTTGGAGTCTTCCGCCACAGCCTCCAAAAACCCCACAAGTGCCTCAGAGATTCCTGTTTTTCTCCTCCAACCGCCTTCCCCAACCCCAATTCCGTCCCTTCCGGCAGCGCCGCCTCCAATCAGCCGCAGAACCCACCAAAACCACCGGATTCCAATCCTAACCCACCACCCCAAAATCCATTTCCGGCTTCTCCGCCTCCGCCTGACGTTGCTTCTCCACCTCCGCCTGCTACCATCCCAACTCCCTTACCACCACCGCCCCCGCAATCCCAATCTCCGCCTCCTCCAGAAACCGCAGCGGCGGCGCCGTTAACTCCGCCCAGTACAACATCGGTGAGTCCGGATCCAATGGAAGCTCAGCTGCGATCCTCGATTCCTAAGACCACTAAGAAGTTCTGA
Protein sequence
MCYVGKATKIFIFIVTILVVLGLVLAFGVFRHSLQKPHKCLRDSCFSPPTAFPNPNSVPSGSAASNQPQNPPKPPDSNPNPPPQNPFPASPPPPDVASPPPPATIPTPLPPPPPQSQSPPPPETAAAAPLTPPSTTSVSPDPMEAQLRSSIPKTTKKF
Homology
BLAST of CmaCh11G018430 vs. ExPASy TrEMBL
Match:
A0A6J1JG03 (sulfated surface glycoprotein 185-like OS=Cucurbita maxima OX=3661 GN=LOC111486559 PE=4 SV=1)
HSP 1 Score: 278.5 bits (711), Expect = 1.7e-71
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTILVVLGLVLAFGVFRHSLQKPHKCLRDSCFSPPTAFPNPNSVPS 60
MCYVGKATKIFIFIVTILVVLGLVLAFGVFRHSLQKPHKCLRDSCFSPPTAFPNPNSVPS
Sbjct: 1 MCYVGKATKIFIFIVTILVVLGLVLAFGVFRHSLQKPHKCLRDSCFSPPTAFPNPNSVPS 60
Query: 61 GSAASNQPQNPPKPPDSNPNPPPQNPFPASPPPPDVASPPPPATIPTPLPPPPPQSQSPP 120
GSAASNQPQNPPKPPDSNPNPPPQNPFPASPPPPDVASPPPPATIPTPLPPPPPQSQSPP
Sbjct: 61 GSAASNQPQNPPKPPDSNPNPPPQNPFPASPPPPDVASPPPPATIPTPLPPPPPQSQSPP 120
Query: 121 PPETAAAAPLTPPSTTSVSPDPMEAQLRSSIPKTTKKF 159
PPETAAAAPLTPPSTTSVSPDPMEAQLRSSIPKTTKKF
Sbjct: 121 PPETAAAAPLTPPSTTSVSPDPMEAQLRSSIPKTTKKF 158
BLAST of CmaCh11G018430 vs. ExPASy TrEMBL
Match:
A0A6J1ERB2 (sulfated surface glycoprotein 185-like OS=Cucurbita moschata OX=3662 GN=LOC111437094 PE=4 SV=1)
HSP 1 Score: 271.9 bits (694), Expect = 1.6e-69
Identity = 154/158 (97.47%), Postives = 156/158 (98.73%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTILVVLGLVLAFGVFRHSLQKPHKCLRDSCFSPPTAFPNPNSVPS 60
MCYVGKATKIFIFIVT+LVVLGLVLAFGVFRHSLQKPHKCL DSCFSPPTAFPNPNSVPS
Sbjct: 1 MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCFSPPTAFPNPNSVPS 60
Query: 61 GSAASNQPQNPPKPPDSNPNPPPQNPFPASPPPPDVASPPPPATIPTPLPPPPPQSQSPP 120
GSAASNQPQNPPKPPDSNPNPPPQNPFPASPPPPDVASPPPPATIPTPLPPPPPQSQSPP
Sbjct: 61 GSAASNQPQNPPKPPDSNPNPPPQNPFPASPPPPDVASPPPPATIPTPLPPPPPQSQSPP 120
Query: 121 PPETAAAAPLTPPSTTSVSPDPMEAQLRSSIPKTTKKF 159
PPETAAAAPLTPPS TSVSPDPM+AQLRSSIPKTTKKF
Sbjct: 121 PPETAAAAPLTPPSPTSVSPDPMDAQLRSSIPKTTKKF 158
BLAST of CmaCh11G018430 vs. ExPASy TrEMBL
Match:
A0A6J1GM63 (sulfated surface glycoprotein 185-like OS=Cucurbita moschata OX=3662 GN=LOC111455518 PE=4 SV=1)
HSP 1 Score: 193.0 bits (489), Expect = 9.7e-46
Identity = 127/177 (71.75%), Postives = 131/177 (74.01%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTILVVLGLVLAFGVFRHSLQKPHKCLRDSCFSPPTAFPNPNSVPS 60
MCYVGKATKIFIFIVT+LVVLGLVL FG RH LQK HKC +SCFSPP FPNPNS
Sbjct: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFMRHGLQKSHKCSGNSCFSPPVVFPNPNSATP 60
Query: 61 GSA----ASNQPQNPPKPPDSNPNPPPQNPF----------PASPPPPDV--ASPPPPAT 120
G A ASNQPQNPP PPDSNPNPPPQNP PASPPPPDV +PPPP T
Sbjct: 61 GGAAPISASNQPQNPPNPPDSNPNPPPQNPIPAFPPPSEATPASPPPPDVIPTTPPPPDT 120
Query: 121 IPTPLPPPP---PQSQSPPPPETAAAAPLTPPSTTSVSPDPMEAQLRSSIPKTTKKF 159
IP PLPPPP P SQSPPPPET A+ PLTPPSTT VSP PM QLRSSI KT KKF
Sbjct: 121 IPNPLPPPPPLLPASQSPPPPETEASPPLTPPSTTPVSPGPMHVQLRSSIRKTNKKF 177
BLAST of CmaCh11G018430 vs. ExPASy TrEMBL
Match:
A0A6J1HW34 (vegetative cell wall protein gp1-like OS=Cucurbita maxima OX=3661 GN=LOC111468063 PE=4 SV=1)
HSP 1 Score: 182.2 bits (461), Expect = 1.7e-42
Identity = 126/194 (64.95%), Postives = 129/194 (66.49%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTILVVLGLVLAFGVFRHSLQKPHKCLRDSCFSPPTAFPNPNSVPS 60
MCYVGKATKIFIFIVT+LVVLGLVL FG RH LQK HKC +SCFSPP FPNPNS
Sbjct: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFMRHGLQKSHKCSGNSCFSPPVVFPNPNSATP 60
Query: 61 GSA----ASNQPQNPPKPPDSNPNPPPQNPF--------------------PASPPPPDV 120
G A ASNQPQNPP PPDSNPNPPPQNP PASPPPPDV
Sbjct: 61 GGAAPISASNQPQNPPNPPDSNPNPPPQNPIPAFPPPSEATPAFPPPSDATPASPPPPDV 120
Query: 121 ------------ASPPPPATIPTPLPPPPPQSQSPPPPETAAAAPLTPPSTTSVSPDPME 159
SPPPP TIP PL PP P SQSPPPPET A+ PLTPPSTT VSP PM
Sbjct: 121 IPTTPPSPDVIPTSPPPPDTIPNPL-PPLPASQSPPPPETEASPPLTPPSTTPVSPGPMH 180
BLAST of CmaCh11G018430 vs. ExPASy TrEMBL
Match:
A0A6J1C2B8 (proline-rich receptor-like protein kinase PERK2 OS=Momordica charantia OX=3673 GN=LOC111007732 PE=4 SV=1)
HSP 1 Score: 174.9 bits (442), Expect = 2.7e-40
Identity = 116/168 (69.05%), Postives = 123/168 (73.21%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTILVVLGLVLAFGVFRHSLQKPHKCLRDSCFSPPTAFPNPNSVPS 60
MCYVGKATKIFIFIVT+LVVLGLVL FG RH LQK HKC +SCFSPP FP+PNS P
Sbjct: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFLRHGLQKSHKCSGNSCFSPPDVFPDPNSAPP 60
Query: 61 GSA----ASNQPQNPPKPPDSNPNPPPQNPFPASPPPPD--VASPPPPATIPTPLPPPPP 120
G A ASNQP N P P DSNPNPPPQNP PA+PPPPD ASPPPP TI PLPPPPP
Sbjct: 61 GGAAPISASNQPGNSPTPTDSNPNPPPQNPIPATPPPPDAVTASPPPPDTIVNPLPPPPP 120
Query: 121 QS----QSPPPPETAAAAPLTPPSTTSVSPDPMEAQLRSSIPKTTKKF 159
QSPPPP T A P TPPSTT V+P PM +QLRSSI K + F
Sbjct: 121 PPPQGYQSPPPPVTEAPPPFTPPSTTPVTPGPMHSQLRSSIRKRDENF 168
BLAST of CmaCh11G018430 vs. NCBI nr
Match:
XP_022989502.1 (sulfated surface glycoprotein 185-like [Cucurbita maxima])
HSP 1 Score: 278.5 bits (711), Expect = 3.6e-71
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTILVVLGLVLAFGVFRHSLQKPHKCLRDSCFSPPTAFPNPNSVPS 60
MCYVGKATKIFIFIVTILVVLGLVLAFGVFRHSLQKPHKCLRDSCFSPPTAFPNPNSVPS
Sbjct: 1 MCYVGKATKIFIFIVTILVVLGLVLAFGVFRHSLQKPHKCLRDSCFSPPTAFPNPNSVPS 60
Query: 61 GSAASNQPQNPPKPPDSNPNPPPQNPFPASPPPPDVASPPPPATIPTPLPPPPPQSQSPP 120
GSAASNQPQNPPKPPDSNPNPPPQNPFPASPPPPDVASPPPPATIPTPLPPPPPQSQSPP
Sbjct: 61 GSAASNQPQNPPKPPDSNPNPPPQNPFPASPPPPDVASPPPPATIPTPLPPPPPQSQSPP 120
Query: 121 PPETAAAAPLTPPSTTSVSPDPMEAQLRSSIPKTTKKF 159
PPETAAAAPLTPPSTTSVSPDPMEAQLRSSIPKTTKKF
Sbjct: 121 PPETAAAAPLTPPSTTSVSPDPMEAQLRSSIPKTTKKF 158
BLAST of CmaCh11G018430 vs. NCBI nr
Match:
XP_022930697.1 (sulfated surface glycoprotein 185-like [Cucurbita moschata] >KAG7022883.1 hypothetical protein SDJN02_16619, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 271.9 bits (694), Expect = 3.4e-69
Identity = 154/158 (97.47%), Postives = 156/158 (98.73%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTILVVLGLVLAFGVFRHSLQKPHKCLRDSCFSPPTAFPNPNSVPS 60
MCYVGKATKIFIFIVT+LVVLGLVLAFGVFRHSLQKPHKCL DSCFSPPTAFPNPNSVPS
Sbjct: 1 MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCFSPPTAFPNPNSVPS 60
Query: 61 GSAASNQPQNPPKPPDSNPNPPPQNPFPASPPPPDVASPPPPATIPTPLPPPPPQSQSPP 120
GSAASNQPQNPPKPPDSNPNPPPQNPFPASPPPPDVASPPPPATIPTPLPPPPPQSQSPP
Sbjct: 61 GSAASNQPQNPPKPPDSNPNPPPQNPFPASPPPPDVASPPPPATIPTPLPPPPPQSQSPP 120
Query: 121 PPETAAAAPLTPPSTTSVSPDPMEAQLRSSIPKTTKKF 159
PPETAAAAPLTPPS TSVSPDPM+AQLRSSIPKTTKKF
Sbjct: 121 PPETAAAAPLTPPSPTSVSPDPMDAQLRSSIPKTTKKF 158
BLAST of CmaCh11G018430 vs. NCBI nr
Match:
XP_023530339.1 (sulfated surface glycoprotein 185-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 265.4 bits (677), Expect = 3.2e-67
Identity = 152/158 (96.20%), Postives = 155/158 (98.10%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTILVVLGLVLAFGVFRHSLQKPHKCLRDSCFSPPTAFPNPNSVPS 60
MCYVGKATKIFIFIVT+LVVLGLVLAFGVFRHSLQKPHKCL DSCFSPPTAFPNPNSVPS
Sbjct: 1 MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCFSPPTAFPNPNSVPS 60
Query: 61 GSAASNQPQNPPKPPDSNPNPPPQNPFPASPPPPDVASPPPPATIPTPLPPPPPQSQSPP 120
GSAASNQPQNPPKPPDSNPNPPPQN FPASPP PDVASPPPPATIPTPLPPPPPQSQSPP
Sbjct: 61 GSAASNQPQNPPKPPDSNPNPPPQNRFPASPPLPDVASPPPPATIPTPLPPPPPQSQSPP 120
Query: 121 PPETAAAAPLTPPSTTSVSPDPMEAQLRSSIPKTTKKF 159
PPETAAAAPLTPPSTTSVSPDPM+AQL+SSIPKTTKKF
Sbjct: 121 PPETAAAAPLTPPSTTSVSPDPMDAQLQSSIPKTTKKF 158
BLAST of CmaCh11G018430 vs. NCBI nr
Match:
XP_022953003.1 (sulfated surface glycoprotein 185-like [Cucurbita moschata])
HSP 1 Score: 193.0 bits (489), Expect = 2.0e-45
Identity = 127/177 (71.75%), Postives = 131/177 (74.01%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTILVVLGLVLAFGVFRHSLQKPHKCLRDSCFSPPTAFPNPNSVPS 60
MCYVGKATKIFIFIVT+LVVLGLVL FG RH LQK HKC +SCFSPP FPNPNS
Sbjct: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFMRHGLQKSHKCSGNSCFSPPVVFPNPNSATP 60
Query: 61 GSA----ASNQPQNPPKPPDSNPNPPPQNPF----------PASPPPPDV--ASPPPPAT 120
G A ASNQPQNPP PPDSNPNPPPQNP PASPPPPDV +PPPP T
Sbjct: 61 GGAAPISASNQPQNPPNPPDSNPNPPPQNPIPAFPPPSEATPASPPPPDVIPTTPPPPDT 120
Query: 121 IPTPLPPPP---PQSQSPPPPETAAAAPLTPPSTTSVSPDPMEAQLRSSIPKTTKKF 159
IP PLPPPP P SQSPPPPET A+ PLTPPSTT VSP PM QLRSSI KT KKF
Sbjct: 121 IPNPLPPPPPLLPASQSPPPPETEASPPLTPPSTTPVSPGPMHVQLRSSIRKTNKKF 177
BLAST of CmaCh11G018430 vs. NCBI nr
Match:
XP_023511649.1 (vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 186.4 bits (472), Expect = 1.9e-43
Identity = 128/197 (64.97%), Postives = 131/197 (66.50%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTILVVLGLVLAFGVFRHSLQKPHKCLRDSCFSPPTAFPNPNSVPS 60
MCYVGKATKIFIFIVT+LVVLGLVL FG RH LQK HKC +SCFSPP FPNPNS
Sbjct: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFMRHGLQKSHKCSGNSCFSPPVVFPNPNSATP 60
Query: 61 GSA----ASNQPQNPPKPPDSNPNPPPQNPF--------------------PASPPPPDV 120
G A ASNQPQNPP PPDSNPNPPPQNP PASPPPPDV
Sbjct: 61 GGAAPISASNQPQNPPNPPDSNPNPPPQNPIPAFPPPSDATPAFPPPSDATPASPPPPDV 120
Query: 121 ------------ASPPPPATIPTPLPPPP---PQSQSPPPPETAAAAPLTPPSTTSVSPD 159
SPPPP TIP PLPPPP P SQSPPPPET A+ PLTPPSTT VSP
Sbjct: 121 IPTTPPPPDVIPTSPPPPDTIPNPLPPPPPLLPASQSPPPPETEASPPLTPPSTTPVSPG 180
BLAST of CmaCh11G018430 vs. TAIR 10
Match:
AT3G22070.1 (proline-rich family protein )
HSP 1 Score: 67.4 bits (163), Expect = 1.2e-11
Identity = 78/181 (43.09%), Postives = 94/181 (51.93%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTILVVLGLVLAFGVFRHSLQKPHKCLRDSCFSPP----------- 60
+CYVGKATKIFIFIVT++ V+GLV+AFGV R + H C D C S
Sbjct: 2 LCYVGKATKIFIFIVTVVFVIGLVVAFGVLR---RHSHHCSGDYCSSSTDPSSSSSSSSS 61
Query: 61 ------TAFPNPNSVPSGSAASNQP---QNPPKPPDS------NPNPP-----PQNPFPA 120
T FPNPN P+ N P +PP P DS +PNPP P P P+
Sbjct: 62 STSPFITPFPNPNPNPN----PNPPVLGSSPPSPTDSSSSTSISPNPPAPIVNPNPPPPS 121
Query: 121 SPPPPDVASPPPPATIPTPLPPPPPQS---QSPPPPETAAAAPLTPPSTTSVSPDPMEAQ 148
+P PP SPPPP T PPPP PPP +A+ PLTPPS+ SP P+ A+
Sbjct: 122 TPNPPPEFSPPPPDLDTTTAPPPPSTDIPIPPPPPAPVSASPPLTPPSSVVTSPAPVHAK 175
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1JG03 | 1.7e-71 | 100.00 | sulfated surface glycoprotein 185-like OS=Cucurbita maxima OX=3661 GN=LOC1114865... | [more] |
A0A6J1ERB2 | 1.6e-69 | 97.47 | sulfated surface glycoprotein 185-like OS=Cucurbita moschata OX=3662 GN=LOC11143... | [more] |
A0A6J1GM63 | 9.7e-46 | 71.75 | sulfated surface glycoprotein 185-like OS=Cucurbita moschata OX=3662 GN=LOC11145... | [more] |
A0A6J1HW34 | 1.7e-42 | 64.95 | vegetative cell wall protein gp1-like OS=Cucurbita maxima OX=3661 GN=LOC11146806... | [more] |
A0A6J1C2B8 | 2.7e-40 | 69.05 | proline-rich receptor-like protein kinase PERK2 OS=Momordica charantia OX=3673 G... | [more] |
Match Name | E-value | Identity | Description | |
XP_022989502.1 | 3.6e-71 | 100.00 | sulfated surface glycoprotein 185-like [Cucurbita maxima] | [more] |
XP_022930697.1 | 3.4e-69 | 97.47 | sulfated surface glycoprotein 185-like [Cucurbita moschata] >KAG7022883.1 hypoth... | [more] |
XP_023530339.1 | 3.2e-67 | 96.20 | sulfated surface glycoprotein 185-like [Cucurbita pepo subsp. pepo] | [more] |
XP_022953003.1 | 2.0e-45 | 71.75 | sulfated surface glycoprotein 185-like [Cucurbita moschata] | [more] |
XP_023511649.1 | 1.9e-43 | 64.97 | vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
AT3G22070.1 | 1.2e-11 | 43.09 | proline-rich family protein | [more] |