CmaCh11G017340 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G017340
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein RALF-like 4
Location	Cma_Chr11: 11518067 .. 11518438 (-)
RNA-Seq Expression	CmaCh11G017340
Synteny	CmaCh11G017340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACAATGAAGATCTGCCTCTTTCTCCTCCTCGTCTTCGCCCTCGTTGCTCCGCTCTCCTTTGCCTTCCATGAAACCTCCCACGGTTCATCCCTCGTTGACGATAATTCTGAATATAGCTTCTTTGGTGGAGGCTCCTCCGAAGCCGAAGCCATGACTGAAGATAGTCGCCGACAACTCTTCGAATATGGATTCGCCTATAATAGGGAAGCTCGCAAGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGTGGTCGTCGTGGTCACTCCTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGTGGTTGTGCTGCCATCACTGGATGTGCTCGATTCACCGATTAA

mRNA sequence

ATGGAAACAATGAAGATCTGCCTCTTTCTCCTCCTCGTCTTCGCCCTCGTTGCTCCGCTCTCCTTTGCCTTCCATGAAACCTCCCACGGTTCATCCCTCGTTGACGATAATTCTGAATATAGCTTCTTTGGTGGAGGCTCCTCCGAAGCCGAAGCCATGACTGAAGATAGTCGCCGACAACTCTTCGAATATGGATTCGCCTATAATAGGGAAGCTCGCAAGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGTGGTCGTCGTGGTCACTCCTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGTGGTTGTGCTGCCATCACTGGATGTGCTCGATTCACCGATTAA

Coding sequence (CDS)

ATGGAAACAATGAAGATCTGCCTCTTTCTCCTCCTCGTCTTCGCCCTCGTTGCTCCGCTCTCCTTTGCCTTCCATGAAACCTCCCACGGTTCATCCCTCGTTGACGATAATTCTGAATATAGCTTCTTTGGTGGAGGCTCCTCCGAAGCCGAAGCCATGACTGAAGATAGTCGCCGACAACTCTTCGAATATGGATTCGCCTATAATAGGGAAGCTCGCAAGAGGTTTTTGACCTACTATGCACTTAGTAAGAATAATATCCCTTGTGGTCGTCGTGGTCACTCCTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGTGGTTGTGCTGCCATCACTGGATGTGCTCGATTCACCGATTAA

Protein sequence

METMKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCARFTD

Homology

[Close]

BLAST of CmaCh11G017340 vs. ExPASy Swiss-Prot
Match: Q6NME6 (Protein RALF-like 19 OS=Arabidopsis thaliana OX=3702 GN=RALFL19 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 8.6e-15
Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 0


Query: 54  TEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCA 113
           +E +RRQL          AR+ +++Y AL KNN+PC RRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 114 AITGCARFT 123
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]

BLAST of CmaCh11G017340 vs. ExPASy Swiss-Prot
Match: Q9FZA0 (Protein RALF-like 4 OS=Arabidopsis thaliana OX=3702 GN=RALFL4 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.6e-14
Identity = 50/125 (40.00%), Postives = 69/125 (55.20%), Query Frame = 0


Query: 1   METMKICLFLLLVFALVAPLSFAFHETS----HGSSLVDDNSEYSFFGGGSSEAEAMTED 60
           M    + +F LL+ A+VA    A +  +    +G   + ++ E         E+   +E 
Sbjct: 1   MGVKMLLIFGLLILAMVAKSVNATYPLTKSCINGQGCIGEDDEL--------ESLMDSET 60

Query: 61  SRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAIT 120
           +RRQL            +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT
Sbjct: 61  NRRQL---------ARGRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAIT 108

Query: 121 GCARF 122
            C R+
Sbjct: 121 HCYRY 108

[Close]

BLAST of CmaCh11G017340 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.6e-11
Identity = 37/81 (45.68%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 42  FFGGG--SSEAEAMTEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDC 101
           F+GGG    E E  +E +RR L          A +R+++Y AL +N IPC RRG SYY+C
Sbjct: 67  FYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTIPCSRRGASYYNC 126

Query: 102 KKRRRINPYRRGCAAITGCAR 121
           ++  + NPY RGC+AIT C R
Sbjct: 127 RRGAQANPYSRGCSAITRCRR 137

[Close]

BLAST of CmaCh11G017340 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.8e-10
Identity = 37/79 (46.84%), Postives = 48/79 (60.76%), Query Frame = 0


Query: 44  GGG--SSEAEAMTEDSRRQLFEYGFAYNRE--ARKRFLTYYALSKNNIPCGRRGHSYYDC 103
           GGG   S  E + E+     FE     NR   A K++++Y AL KN++PC RRG SYY+C
Sbjct: 38  GGGCKGSIGECIAEEEE---FELDSESNRRILATKKYISYGALQKNSVPCSRRGASYYNC 97

Query: 104 KKRRRINPYRRGCAAITGC 119
           K   + NPY RGC+AIT C
Sbjct: 98  KPGAQANPYSRGCSAITRC 113

[Close]

BLAST of CmaCh11G017340 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-09
Identity = 41/111 (36.94%), Postives = 63/111 (56.76%), Query Frame = 0


Query: 13  VFALVAPLSFAFHET-SHGSSL--VDDNSEYSFFGGGSSEAEAMTEDSRRQLFEYGFAYN 72
           V A++A +  A   T   G SL  V   S   F G   S AE + E+   + F+   +  
Sbjct: 10  VIAILAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEME-FDSDISRR 69

Query: 73  REARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 121
             A+K++++Y A+ +N++PC RRG SYY+C++  + NPY RGC+ IT C R
Sbjct: 70  ILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCRR 119

[Close]

BLAST of CmaCh11G017340 vs. ExPASy TrEMBL
Match: A0A6J1JIT9 (protein RALF-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111486203 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 8.8e-63
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   METMKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQ 60
           METMKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQ
Sbjct: 1   METMKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQ 60

Query: 61  LFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 120
           LFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR
Sbjct: 61  LFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 120

Query: 121 FTD 124
           FTD
Sbjct: 121 FTD 123

[Close]

BLAST of CmaCh11G017340 vs. ExPASy TrEMBL
Match: A0A6J1JL71 (protein RALF-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111486206 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.2e-53
Identity = 110/123 (89.43%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 1   METMKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQ 60
           METMKICLFLLLVFA+VAP S AFHETS+ SSLVDDNS+YSFFGG SS  E+MTEDSRRQ
Sbjct: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSS--ESMTEDSRRQ 60

Query: 61  LFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 120
           LF+YGFAYN EARKRFLTYYALSKNNIPCGRRG SYYDCKKRRRINPYRRGCAAITGCAR
Sbjct: 61  LFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCAR 120

Query: 121 FTD 124
           FTD
Sbjct: 121 FTD 121

[Close]

BLAST of CmaCh11G017340 vs. ExPASy TrEMBL
Match: A0A6J1EIG3 (rapid alkalinization factor 23-like OS=Cucurbita moschata OX=3662 GN=LOC111434549 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.6e-51
Identity = 107/123 (86.99%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 1   METMKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQ 60
           METMKI L LLLVF  VAPLSFAFHE SH SSL+DDNS+YSFFGG SS  EAMTEDSRRQ
Sbjct: 1   METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSS--EAMTEDSRRQ 60

Query: 61  LFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 120
           LF+YGF YN+EARKRFL+YYALSKNNIPCGRRG SYYDCKKRRRINPYRRGCAAITGCAR
Sbjct: 61  LFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 120

Query: 121 FTD 124
           FTD
Sbjct: 121 FTD 121

[Close]

BLAST of CmaCh11G017340 vs. ExPASy TrEMBL
Match: A0A6J1EPT5 (protein RALF-like 4 OS=Cucurbita moschata OX=3662 GN=LOC111434548 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.6e-50
Identity = 106/124 (85.48%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   METMKICLFLLLVFALVA-PLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRR 60
           METMK+CLFLLLVFA V+ P SFAFHETS GSS  D +S+YSFFGG SS  EA+TEDSRR
Sbjct: 1   METMKLCLFLLLVFATVSPPFSFAFHETSDGSSAFDYSSQYSFFGGDSS--EAITEDSRR 60

Query: 61  QLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCA 120
           QLF+YGFAYNREAR+RFLTYYALSKNNIPCGRRG SYYDCKKRRRINPYRRGCAAITGCA
Sbjct: 61  QLFQYGFAYNREARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCA 120

Query: 121 RFTD 124
           RFTD
Sbjct: 121 RFTD 122

[Close]

BLAST of CmaCh11G017340 vs. ExPASy TrEMBL
Match: A0A6J1EIU0 (protein RALF-like 4 OS=Cucurbita moschata OX=3662 GN=LOC111434547 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 5.6e-49
Identity = 104/124 (83.87%), Postives = 114/124 (91.94%), Query Frame = 0


Query: 1   METMKICLFLLLVFALVA-PLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRR 60
           MET+K+CLFLL V A+VA PLSFA+HETS+ SS V+D S+YSFFGG SS  EAMTEDSRR
Sbjct: 1   METVKLCLFLLFVLAVVAPPLSFAYHETSNDSSYVNDISKYSFFGGDSS--EAMTEDSRR 60

Query: 61  QLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCA 120
           QLF+YGFAYN+EAR+RFLTYYALSKNNIPCGRRG SYYDCKKRRRINPYRRGCAAITGCA
Sbjct: 61  QLFQYGFAYNKEARRRFLTYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCA 120

Query: 121 RFTD 124
           RFTD
Sbjct: 121 RFTD 122

[Close]

BLAST of CmaCh11G017340 vs. NCBI nr
Match: XP_022989011.1 (protein RALF-like 4 [Cucurbita maxima])

HSP 1 Score: 249.2 bits (635), Expect = 1.8e-62
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   METMKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQ 60
           METMKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQ
Sbjct: 1   METMKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQ 60

Query: 61  LFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 120
           LFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR
Sbjct: 61  LFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 120

Query: 121 FTD 124
           FTD
Sbjct: 121 FTD 123

[Close]

BLAST of CmaCh11G017340 vs. NCBI nr
Match: XP_022989015.1 (protein RALF-like 4 [Cucurbita maxima])

HSP 1 Score: 218.0 bits (554), Expect = 4.5e-53
Identity = 110/123 (89.43%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 1   METMKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQ 60
           METMKICLFLLLVFA+VAP S AFHETS+ SSLVDDNS+YSFFGG SS  E+MTEDSRRQ
Sbjct: 1   METMKICLFLLLVFAVVAPFSVAFHETSYDSSLVDDNSKYSFFGGDSS--ESMTEDSRRQ 60

Query: 61  LFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 120
           LF+YGFAYN EARKRFLTYYALSKNNIPCGRRG SYYDCKKRRRINPYRRGCAAITGCAR
Sbjct: 61  LFQYGFAYNTEARKRFLTYYALSKNNIPCGRRGSSYYDCKKRRRINPYRRGCAAITGCAR 120

Query: 121 FTD 124
           FTD
Sbjct: 121 FTD 121

[Close]

BLAST of CmaCh11G017340 vs. NCBI nr
Match: KAG6588679.1 (Protein RALF-like 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022466.1 Protein RALF-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 213.8 bits (543), Expect = 8.5e-52
Identity = 107/120 (89.17%), Postives = 112/120 (93.33%), Query Frame = 0


Query: 4   MKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQLFE 63
           MKICL LLLVFA+VAPLSFAFHE SH SSL+DDNSEYSFFGG SS  EAMTEDSRRQLF+
Sbjct: 1   MKICLVLLLVFAVVAPLSFAFHEASHSSSLLDDNSEYSFFGGDSS--EAMTEDSRRQLFQ 60

Query: 64  YGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCARFTD 123
           YGF YN+EARKRFL+YYALSKNNIPCGRRG SYYDCKKRRRINPYRRGCAAITGCARFTD
Sbjct: 61  YGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD 118

[Close]

BLAST of CmaCh11G017340 vs. NCBI nr
Match: XP_022927736.1 (rapid alkalinization factor 23-like [Cucurbita moschata])

HSP 1 Score: 211.8 bits (538), Expect = 3.2e-51
Identity = 107/123 (86.99%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 1   METMKICLFLLLVFALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRRQ 60
           METMKI L LLLVF  VAPLSFAFHE SH SSL+DDNS+YSFFGG SS  EAMTEDSRRQ
Sbjct: 1   METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSS--EAMTEDSRRQ 60

Query: 61  LFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 120
           LF+YGF YN+EARKRFL+YYALSKNNIPCGRRG SYYDCKKRRRINPYRRGCAAITGCAR
Sbjct: 61  LFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 120

Query: 121 FTD 124
           FTD
Sbjct: 121 FTD 121

[Close]

BLAST of CmaCh11G017340 vs. NCBI nr
Match: XP_023530159.1 (protein RALF-like 19 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206.8 bits (525), Expect = 1.0e-49
Identity = 109/124 (87.90%), Postives = 114/124 (91.94%), Query Frame = 0


Query: 1   METMKICLFLLLV-FALVAPLSFAFHETSHGSSLVDDNSEYSFFGGGSSEAEAMTEDSRR 60
           METMKICL LLLV FA+VAPLSFAFHETSH SSL+ DNS+YSFFGG SS  EAMTEDSRR
Sbjct: 1   METMKICLVLLLVFFAVVAPLSFAFHETSHSSSLL-DNSQYSFFGGDSS--EAMTEDSRR 60

Query: 61  QLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCA 120
           QLF+YGFAYN EARKR L+YYALSKNNIPCGRRG SYYDCKKRRRINPYRRGCAAITGCA
Sbjct: 61  QLFQYGFAYNAEARKRVLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCA 120

Query: 121 RFTD 124
           RFTD
Sbjct: 121 RFTD 121

[Close]

BLAST of CmaCh11G017340 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 81.3 bits (199), Expect = 6.1e-16
Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 0


Query: 54  TEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCA 113
           +E +RRQL          AR+ +++Y AL KNN+PC RRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 114 AITGCARFT 123
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]

BLAST of CmaCh11G017340 vs. TAIR 10
Match: AT1G28270.1 (ralf-like 4 )

HSP 1 Score: 78.6 bits (192), Expect = 4.0e-15
Identity = 50/125 (40.00%), Postives = 69/125 (55.20%), Query Frame = 0


Query: 1   METMKICLFLLLVFALVAPLSFAFHETS----HGSSLVDDNSEYSFFGGGSSEAEAMTED 60
           M    + +F LL+ A+VA    A +  +    +G   + ++ E         E+   +E 
Sbjct: 1   MGVKMLLIFGLLILAMVAKSVNATYPLTKSCINGQGCIGEDDEL--------ESLMDSET 60

Query: 61  SRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAIT 120
           +RRQL            +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT
Sbjct: 61  NRRQL---------ARGRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAIT 108

Query: 121 GCARF 122
            C R+
Sbjct: 121 HCYRY 108

[Close]

BLAST of CmaCh11G017340 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 68.2 bits (165), Expect = 5.4e-12
Identity = 37/81 (45.68%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 42  FFGGG--SSEAEAMTEDSRRQLFEYGFAYNREARKRFLTYYALSKNNIPCGRRGHSYYDC 101
           F+GGG    E E  +E +RR L          A +R+++Y AL +N IPC RRG SYY+C
Sbjct: 67  FYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTIPCSRRGASYYNC 126

Query: 102 KKRRRINPYRRGCAAITGCAR 121
           ++  + NPY RGC+AIT C R
Sbjct: 127 RRGAQANPYSRGCSAITRCRR 137

[Close]

BLAST of CmaCh11G017340 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 64.3 bits (155), Expect = 7.8e-11
Identity = 41/111 (36.94%), Postives = 63/111 (56.76%), Query Frame = 0


Query: 13  VFALVAPLSFAFHET-SHGSSL--VDDNSEYSFFGGGSSEAEAMTEDSRRQLFEYGFAYN 72
           V A++A +  A   T   G SL  V   S   F G   S AE + E+   + F+   +  
Sbjct: 10  VIAILAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEME-FDSDISRR 69

Query: 73  REARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCAR 121
             A+K++++Y A+ +N++PC RRG SYY+C++  + NPY RGC+ IT C R
Sbjct: 70  ILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCRR 119

[Close]

BLAST of CmaCh11G017340 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 62.8 bits (151), Expect = 2.3e-10
Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 62  FEYGFAYNRE--ARKRFLTYYALSKNNIPCGRRGHSYYDCKKRRRINPYRRGCAAITGCA 121
           FE     NR   A  ++++Y AL +N +PC RRG SYY+C++  + NPY RGC+AIT C 
Sbjct: 56  FEMDSEINRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

The following BLAST results are available for this feature:

BLAST of CmaCh11G017340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NME6	8.6e-15	56.52	Protein RALF-like 19 OS=Arabidopsis thaliana OX=3702 GN=RALFL19 PE=3 SV=1	[more]
Q9FZA0	5.6e-14	40.00	Protein RALF-like 4 OS=Arabidopsis thaliana OX=3702 GN=RALFL4 PE=1 SV=1	[more]
Q9LUS7	7.6e-11	45.68	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
Q945T0	3.8e-10	46.84	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q9MA62	1.1e-09	36.94	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]

BLAST of CmaCh11G017340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JIT9	8.8e-63	100.00	protein RALF-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111486203 PE=3 SV=1	[more]
A0A6J1JL71	2.2e-53	89.43	protein RALF-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111486206 PE=3 SV=1	[more]
A0A6J1EIG3	1.6e-51	86.99	rapid alkalinization factor 23-like OS=Cucurbita moschata OX=3662 GN=LOC11143454...	[more]
A0A6J1EPT5	6.6e-50	85.48	protein RALF-like 4 OS=Cucurbita moschata OX=3662 GN=LOC111434548 PE=3 SV=1	[more]
A0A6J1EIU0	5.6e-49	83.87	protein RALF-like 4 OS=Cucurbita moschata OX=3662 GN=LOC111434547 PE=3 SV=1	[more]

BLAST of CmaCh11G017340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989011.1	1.8e-62	100.00	protein RALF-like 4 [Cucurbita maxima]	[more]
XP_022989015.1	4.5e-53	89.43	protein RALF-like 4 [Cucurbita maxima]	[more]
KAG6588679.1	8.5e-52	89.17	Protein RALF-like 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022466...	[more]
XP_022927736.1	3.2e-51	86.99	rapid alkalinization factor 23-like [Cucurbita moschata]	[more]
XP_023530159.1	1.0e-49	87.90	protein RALF-like 19 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh11G017340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33775.1	6.1e-16	56.52	ralf-like 19	[more]
AT1G28270.1	4.0e-15	40.00	ralf-like 4	[more]
AT3G16570.1	5.4e-12	45.68	rapid alkalinization factor 23	[more]
AT3G05490.1	7.8e-11	36.94	ralf-like 22	[more]
AT4G15800.1	2.3e-10	47.54	ralf-like 33	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 63..120 e-value: 2.0E-18 score: 67.1
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 8..122
None	No IPR available	PANTHER	PTHR33136:SF84	PROTEIN RALF-LIKE 19	coord: 8..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G017340.1	CmaCh11G017340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005576	extracellular region