CmaCh11G016640 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G016640
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein PELPK1-like
Location	Cma_Chr11: 10956399 .. 10956731 (-)
RNA-Seq Expression	CmaCh11G016640
Synteny	CmaCh11G016640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTCGTTTCTCCACTTTTATATTCCTCCTCATCCTTAGTGCTTTGATGTTGATGAACTTCGATTTTTTTGTGATGACGGTGAGTGCGAGACATCTTTTGGAGTTGCCATTACTCAAGGTATCCGAAGAGCTTTCGAAGCTAGAAGTACCCATTTTATCAAAGCCTAAGCTTCCTCCATTGCTGAAGGTTGAGTTGCCTCATTTGGAAAAGCCTAAAGTGCCTGAATTGCCAAACACTGAGCTCCCAAAATTACCTCAGTTGCCTCCTTTGGAAAAACCTAAAGTGCCGGAATTGCCTAAACCTGAACTCCCAAAATTACCTCATTGA

mRNA sequence

ATGGCTACTCGTTTCTCCACTTTTATATTCCTCCTCATCCTTAGTGCTTTGATGTTGATGAACTTCGATTTTTTTGTGATGACGGTGAGTGCGAGACATCTTTTGGAGTTGCCATTACTCAAGGTATCCGAAGAGCTTTCGAAGCTAGAAGTACCCATTTTATCAAAGCCTAAGCTTCCTCCATTGCTGAAGGTTGAGTTGCCTCATTTGGAAAAGCCTAAAGTGCCTGAATTGCCAAACACTGAGCTCCCAAAATTACCTCAGTTGCCTCCTTTGGAAAAACCTAAAGTGCCGGAATTGCCTAAACCTGAACTCCCAAAATTACCTCATTGA

Coding sequence (CDS)

ATGGCTACTCGTTTCTCCACTTTTATATTCCTCCTCATCCTTAGTGCTTTGATGTTGATGAACTTCGATTTTTTTGTGATGACGGTGAGTGCGAGACATCTTTTGGAGTTGCCATTACTCAAGGTATCCGAAGAGCTTTCGAAGCTAGAAGTACCCATTTTATCAAAGCCTAAGCTTCCTCCATTGCTGAAGGTTGAGTTGCCTCATTTGGAAAAGCCTAAAGTGCCTGAATTGCCAAACACTGAGCTCCCAAAATTACCTCAGTTGCCTCCTTTGGAAAAACCTAAAGTGCCGGAATTGCCTAAACCTGAACTCCCAAAATTACCTCATTGA

Protein sequence

MATRFSTFIFLLILSALMLMNFDFFVMTVSARHLLELPLLKVSEELSKLEVPILSKPKLPPLLKVELPHLEKPKVPELPNTELPKLPQLPPLEKPKVPELPKPELPKLPH

Homology

[Close]

BLAST of CmaCh11G016640 vs. ExPASy Swiss-Prot
Match: Q9LXB8 (Protein PELPK1 OS=Arabidopsis thaliana OX=3702 GN=PELPK1 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08
Identity = 53/113 (46.90%), Postives = 66/113 (58.41%), Query Frame = 0


Query: 11  LLILSALMLMNFDFFVMTVSARHLLELPLLKVSE--ELSKLEVPILSK------PKLPPL 70
           LLI+  + L+   F   +V AR LLE P  ++ +  EL K EVP L +      PKLP  
Sbjct: 17  LLIICLIALLADPF---SVGARRLLEDPKPEIPKLPELPKFEVPKLPEFPKPELPKLPEF 76

Query: 71  LKVELPHL------EKPKVPELPNTELPKLPQLPPLEKPKVPELPKPELPKLP 110
            K ELP +      E PKVPE+P  E  KLP +P LE PK PE+PKPELPK+P
Sbjct: 77  PKPELPKIPEIPKPELPKVPEIPKPEETKLPDIPKLELPKFPEIPKPELPKMP 126

[Close]

BLAST of CmaCh11G016640 vs. ExPASy Swiss-Prot
Match: Q9LXB7 (Protein PELPK2 OS=Arabidopsis thaliana OX=3702 GN=PELPK2 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.3e-05
Identity = 46/117 (39.32%), Postives = 67/117 (57.26%), Query Frame = 0


Query: 2   ATRFSTFIFLLILSALMLMNFDFFVMTVSARHLLELPLLKV-------SEELSKL-EVPI 61
           A+  S F+ + +++ L +       ++V AR LLE P  ++         E+ KL E P 
Sbjct: 9   ASLLSPFLIICLIALLSV------PVSVGARRLLEEPKPEIPTFPELPKPEMPKLPEFPK 68

Query: 62  LSKPKLPPLLKVELPHLEKPKVPELPN-TELPKLPQLPPLEKPKVPELPKPELPKLP 110
           L  PKLP + K E+P L + + PELP   ELPK+P+ P  + PK+PELPKPE  K+P
Sbjct: 69  LELPKLPEIPKPEMPKLPEIQKPELPTFPELPKMPEFPKFDFPKLPELPKPEETKVP 119

[Close]

BLAST of CmaCh11G016640 vs. ExPASy TrEMBL
Match: A0A6J1EM16 (protein PELPK1-like OS=Cucurbita moschata OX=3662 GN=LOC111434585 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.8e-36
Identity = 94/109 (86.24%), Postives = 97/109 (88.99%), Query Frame = 0


Query: 1   MATRFSTFIFLLILSALMLMNFDFFVMTVSARHLLELPLLKVSEELSKLEVPILSKPKLP 60
           MATRFSTF+F LILSA MLMNFDFFVMTVSARHLLE PL KV EEL K EVPILSKP+LP
Sbjct: 1   MATRFSTFVFPLILSAFMLMNFDFFVMTVSARHLLESPLPKVPEELPKPEVPILSKPELP 60

Query: 61  PLLKVELPHLEKPKVPELPNTELPKLPQLPPLEKPKVPELPKPELPKLP 110
           PL KVELP LEKPKVPELP  ELPK+PQLPPLEKPKVPEL KPELPKLP
Sbjct: 61  PLPKVELPPLEKPKVPELPKPELPKVPQLPPLEKPKVPELSKPELPKLP 109

[Close]

BLAST of CmaCh11G016640 vs. ExPASy TrEMBL
Match: A0A6J1JIK1 (protein PELPK1 OS=Cucurbita maxima OX=3661 GN=LOC111486123 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 6.5e-33
Identity = 88/109 (80.73%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 1   MATRFSTFIFLLILSALMLMNFDFFVMTVSARHLLELPLLKVSEELSKLEVPILSKPKLP 60
           MATRFSTF+F LILS  MLM+FD FV TVSARHLLE PL K+ E+L K +VP LSKP+LP
Sbjct: 1   MATRFSTFVFPLILSVSMLMSFDCFVTTVSARHLLETPLPKIPEKLPKPDVPSLSKPELP 60

Query: 61  PLLKVELPHLEKPKVPELPNTELPKLPQLPPLEKPKVPELPKPELPKLP 110
           PL KVELP LEKPKVPELP  ELPKLPQLPPLEKPKVPELPKPELPKLP
Sbjct: 61  PLPKVELPPLEKPKVPELPKPELPKLPQLPPLEKPKVPELPKPELPKLP 109

[Close]

BLAST of CmaCh11G016640 vs. ExPASy TrEMBL
Match: A0A6J1EI80 (protein PELPK1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434584 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.5e-32
Identity = 88/109 (80.73%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 1   MATRFSTFIFLLILSALMLMNFDFFVMTVSARHLLELPLLKVSEELSKLEVPILSKPKLP 60
           MATRFSTF+F LILS  MLM+FD FVMTVSARHLLE P+ KV EEL K EVP LSKP+LP
Sbjct: 1   MATRFSTFVFSLILSVSMLMSFDCFVMTVSARHLLETPVPKVPEELPKPEVPSLSKPELP 60

Query: 61  PLLKVELPHLEKPKVPELPNTELPKLPQLPPLEKPKVPELPKPELPKLP 110
           PL KVELP LEKPKVPELP  +LPK+PQLPPLEK KVPELPKPELPKLP
Sbjct: 61  PLPKVELPPLEKPKVPELPKPKLPKVPQLPPLEKLKVPELPKPELPKLP 109

[Close]

BLAST of CmaCh11G016640 vs. ExPASy TrEMBL
Match: A0A6J1EPY6 (protein PELPK1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434584 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.5e-32
Identity = 88/109 (80.73%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 1   MATRFSTFIFLLILSALMLMNFDFFVMTVSARHLLELPLLKVSEELSKLEVPILSKPKLP 60
           MATRFSTF+F LILS  MLM+FD FVMTVSARHLLE P+ KV EEL K EVP LSKP+LP
Sbjct: 1   MATRFSTFVFSLILSVSMLMSFDCFVMTVSARHLLETPVPKVPEELPKPEVPSLSKPELP 60

Query: 61  PLLKVELPHLEKPKVPELPNTELPKLPQLPPLEKPKVPELPKPELPKLP 110
           PL KVELP LEKPKVPELP  +LPK+PQLPPLEK KVPELPKPELPKLP
Sbjct: 61  PLPKVELPPLEKPKVPELPKPKLPKVPQLPPLEKLKVPELPKPELPKLP 109

[Close]

BLAST of CmaCh11G016640 vs. ExPASy TrEMBL
Match: A0A6J1EJ06 (protein PELPK1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434583 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.7e-31
Identity = 87/109 (79.82%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 1   MATRFSTFIFLLILSALMLMNFDFFVMTVSARHLLELPLLKVSEELSKLEVPILSKPKLP 60
           MATRFSTF+F LILS  MLM+FD FV+ VSARHLLE PL KV EEL K E+PILSK +LP
Sbjct: 1   MATRFSTFVFPLILSVSMLMSFDCFVIMVSARHLLESPLPKVPEELPKPEIPILSKSELP 60

Query: 61  PLLKVELPHLEKPKVPELPNTELPKLPQLPPLEKPKVPELPKPELPKLP 110
           PL KVELP LEKPKVPELP  ELPKLPQLPPLEK KV ELPKPELPKLP
Sbjct: 61  PLPKVELPPLEKPKVPELPKPELPKLPQLPPLEKSKVSELPKPELPKLP 109

[Close]

BLAST of CmaCh11G016640 vs. NCBI nr
Match: KAG6588752.1 (Protein PELPK1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 161.8 bits (408), Expect = 3.4e-36
Identity = 94/109 (86.24%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 1   MATRFSTFIFLLILSALMLMNFDFFVMTVSARHLLELPLLKVSEELSKLEVPILSKPKLP 60
           MATRFSTF+F LILSA MLM+FDFFVMTVSARHLLELPL KV EEL K EVPILSKP+LP
Sbjct: 1   MATRFSTFVFPLILSAFMLMSFDFFVMTVSARHLLELPLPKVPEELPKPEVPILSKPELP 60

Query: 61  PLLKVELPHLEKPKVPELPNTELPKLPQLPPLEKPKVPELPKPELPKLP 110
           PL KVELP L+KPKVPELP  ELPKLPQLPPLEKPKVP+LPKPELPKLP
Sbjct: 61  PLPKVELPPLKKPKVPELPKPELPKLPQLPPLEKPKVPKLPKPELPKLP 109

[Close]

BLAST of CmaCh11G016640 vs. NCBI nr
Match: XP_022927803.1 (protein PELPK1-like [Cucurbita moschata])

HSP 1 Score: 160.2 bits (404), Expect = 1.0e-35
Identity = 94/109 (86.24%), Postives = 97/109 (88.99%), Query Frame = 0


Query: 1   MATRFSTFIFLLILSALMLMNFDFFVMTVSARHLLELPLLKVSEELSKLEVPILSKPKLP 60
           MATRFSTF+F LILSA MLMNFDFFVMTVSARHLLE PL KV EEL K EVPILSKP+LP
Sbjct: 1   MATRFSTFVFPLILSAFMLMNFDFFVMTVSARHLLESPLPKVPEELPKPEVPILSKPELP 60

Query: 61  PLLKVELPHLEKPKVPELPNTELPKLPQLPPLEKPKVPELPKPELPKLP 110
           PL KVELP LEKPKVPELP  ELPK+PQLPPLEKPKVPEL KPELPKLP
Sbjct: 61  PLPKVELPPLEKPKVPELPKPELPKVPQLPPLEKPKVPELSKPELPKLP 109

[Close]

BLAST of CmaCh11G016640 vs. NCBI nr
Match: XP_023531800.1 (protein PELPK1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 156.4 bits (394), Expect = 1.4e-34
Identity = 93/109 (85.32%), Postives = 97/109 (88.99%), Query Frame = 0


Query: 1   MATRFSTFIFLLILSALMLMNFDFFVMTVSARHLLELPLLKVSEELSKLEVPILSKPKLP 60
           MATRFSTF+F LILS  MLM+FD FVMTVSAR+LLE PLLKVSEEL KLEVP LSKP+LP
Sbjct: 1   MATRFSTFVFPLILSVSMLMSFDCFVMTVSARNLLESPLLKVSEELPKLEVPSLSKPELP 60

Query: 61  PLLKVELPHLEKPKVPELPNTELPKLPQLPPLEKPKVPELPKPELPKLP 110
           PL KVELP LEKPKVPELP  ELPKLPQLPPLEKPKV ELPKPELPKLP
Sbjct: 61  PLPKVELPPLEKPKVPELPKPELPKLPQLPPLEKPKVSELPKPELPKLP 109

[Close]

BLAST of CmaCh11G016640 vs. NCBI nr
Match: KAG6588750.1 (Protein PELPK1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 154.1 bits (388), Expect = 7.2e-34
Identity = 90/109 (82.57%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 1   MATRFSTFIFLLILSALMLMNFDFFVMTVSARHLLELPLLKVSEELSKLEVPILSKPKLP 60
           MATRFSTF+F L+LS  MLM FD FVMTVSARHLLE PL KV EEL K EVP LSKP+LP
Sbjct: 1   MATRFSTFVFPLVLSVFMLMRFDCFVMTVSARHLLETPLPKVPEELPKPEVPSLSKPELP 60

Query: 61  PLLKVELPHLEKPKVPELPNTELPKLPQLPPLEKPKVPELPKPELPKLP 110
           PL KVELP LEKPKVPELP  ELPK+PQLPPLEKPKVPELPKPELPKLP
Sbjct: 61  PLPKVELPPLEKPKVPELPKPELPKVPQLPPLEKPKVPELPKPELPKLP 109

[Close]

BLAST of CmaCh11G016640 vs. NCBI nr
Match: XP_022988911.1 (protein PELPK1 [Cucurbita maxima])

HSP 1 Score: 149.8 bits (377), Expect = 1.3e-32
Identity = 88/109 (80.73%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 1   MATRFSTFIFLLILSALMLMNFDFFVMTVSARHLLELPLLKVSEELSKLEVPILSKPKLP 60
           MATRFSTF+F LILS  MLM+FD FV TVSARHLLE PL K+ E+L K +VP LSKP+LP
Sbjct: 1   MATRFSTFVFPLILSVSMLMSFDCFVTTVSARHLLETPLPKIPEKLPKPDVPSLSKPELP 60

Query: 61  PLLKVELPHLEKPKVPELPNTELPKLPQLPPLEKPKVPELPKPELPKLP 110
           PL KVELP LEKPKVPELP  ELPKLPQLPPLEKPKVPELPKPELPKLP
Sbjct: 61  PLPKVELPPLEKPKVPELPKPELPKLPQLPPLEKPKVPELPKPELPKLP 109

[Close]

BLAST of CmaCh11G016640 vs. TAIR 10
Match: AT5G09530.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 60.8 bits (146), Expect = 7.7e-10
Identity = 53/113 (46.90%), Postives = 66/113 (58.41%), Query Frame = 0


Query: 11  LLILSALMLMNFDFFVMTVSARHLLELPLLKVSE--ELSKLEVPILSK------PKLPPL 70
           LLI+  + L+   F   +V AR LLE P  ++ +  EL K EVP L +      PKLP  
Sbjct: 17  LLIICLIALLADPF---SVGARRLLEDPKPEIPKLPELPKFEVPKLPEFPKPELPKLPEF 76

Query: 71  LKVELPHL------EKPKVPELPNTELPKLPQLPPLEKPKVPELPKPELPKLP 110
            K ELP +      E PKVPE+P  E  KLP +P LE PK PE+PKPELPK+P
Sbjct: 77  PKPELPKIPEIPKPELPKVPEIPKPEETKLPDIPKLELPKFPEIPKPELPKMP 126

[Close]

BLAST of CmaCh11G016640 vs. TAIR 10
Match: AT5G09520.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 48.9 bits (115), Expect = 3.0e-06
Identity = 46/117 (39.32%), Postives = 67/117 (57.26%), Query Frame = 0


Query: 2   ATRFSTFIFLLILSALMLMNFDFFVMTVSARHLLELPLLKV-------SEELSKL-EVPI 61
           A+  S F+ + +++ L +       ++V AR LLE P  ++         E+ KL E P 
Sbjct: 9   ASLLSPFLIICLIALLSV------PVSVGARRLLEEPKPEIPTFPELPKPEMPKLPEFPK 68

Query: 62  LSKPKLPPLLKVELPHLEKPKVPELPN-TELPKLPQLPPLEKPKVPELPKPELPKLP 110
           L  PKLP + K E+P L + + PELP   ELPK+P+ P  + PK+PELPKPE  K+P
Sbjct: 69  LELPKLPEIPKPEMPKLPEIQKPELPTFPELPKMPEFPKFDFPKLPELPKPEETKVP 119

The following BLAST results are available for this feature:

BLAST of CmaCh11G016640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXB8	1.1e-08	46.90	Protein PELPK1 OS=Arabidopsis thaliana OX=3702 GN=PELPK1 PE=2 SV=1	[more]
Q9LXB7	4.3e-05	39.32	Protein PELPK2 OS=Arabidopsis thaliana OX=3702 GN=PELPK2 PE=3 SV=1	[more]

BLAST of CmaCh11G016640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EM16	4.8e-36	86.24	protein PELPK1-like OS=Cucurbita moschata OX=3662 GN=LOC111434585 PE=4 SV=1	[more]
A0A6J1JIK1	6.5e-33	80.73	protein PELPK1 OS=Cucurbita maxima OX=3661 GN=LOC111486123 PE=4 SV=1	[more]
A0A6J1EI80	2.5e-32	80.73	protein PELPK1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434584 PE=...	[more]
A0A6J1EPY6	2.5e-32	80.73	protein PELPK1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434584 PE=...	[more]
A0A6J1EJ06	4.7e-31	79.82	protein PELPK1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434583 PE=...	[more]

BLAST of CmaCh11G016640 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588752.1	3.4e-36	86.24	Protein PELPK1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022927803.1	1.0e-35	86.24	protein PELPK1-like [Cucurbita moschata]	[more]
XP_023531800.1	1.4e-34	85.32	protein PELPK1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6588750.1	7.2e-34	82.57	Protein PELPK1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022988911.1	1.3e-32	80.73	protein PELPK1 [Cucurbita maxima]	[more]

BLAST of CmaCh11G016640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09530.1	7.7e-10	46.90	hydroxyproline-rich glycoprotein family protein	[more]
AT5G09520.1	3.0e-06	39.32	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..110
None	No IPR available	PANTHER	PTHR33088:SF28	PROTEIN PELPK1-RELATED	coord: 3..109
IPR044659	Protein PELPK-like	PANTHER	PTHR33088	MUCIN-2	coord: 3..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G016640.1	CmaCh11G016640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane