CmaCh11G015380 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G015380
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	C2H2-like zinc finger protein
Location	Cma_Chr11: 10028103 .. 10028573 (+)
RNA-Seq Expression	CmaCh11G015380
Synteny	CmaCh11G015380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACCCTGCCATTTATGACTTCCTTAGCCAAACGACTGCTTCTAATTCTGTACCGAAAACGACCTCCAGAAAATCTCAGTCTCAATACTCTTCCTCACGCATTTTTCCATGCCTTTACTGTCCTCGAAAATTCTACACTTCCCAAGCCCTAGGCGGCCACCAAAATGCTCACAAAAGAGAAAGAGCAGCTTCGCGTAAGGTCTTCACCTCTGAAATTCTTCACCTCGGTTCGCTTCAACACTCGAGGCCACCGCCGCCGCCGCCGACTACTTACCACCATCTTGCATCGCCGTCTGCTACAGCACTGGCTCCGTCGGCGCTTTTTGACGAGCATTGGTTCCATCAGAACAATCACTACCGAGGTACTACCACTACAGCCTCTGCCTCCGCCTCGCCGAACGATCTCTCACCGAATGCTGATGCTGCCGTTGAACACGTAACCATCGATCTCACTCTTCGCTTATGA

mRNA sequence

ATGGCGGACCCTGCCATTTATGACTTCCTTAGCCAAACGACTGCTTCTAATTCTGTACCGAAAACGACCTCCAGAAAATCTCAGTCTCAATACTCTTCCTCACGCATTTTTCCATGCCTTTACTGTCCTCGAAAATTCTACACTTCCCAAGCCCTAGGCGGCCACCAAAATGCTCACAAAAGAGAAAGAGCAGCTTCGCGTAAGGTCTTCACCTCTGAAATTCTTCACCTCGGTTCGCTTCAACACTCGAGGCCACCGCCGCCGCCGCCGACTACTTACCACCATCTTGCATCGCCGTCTGCTACAGCACTGGCTCCGTCGGCGCTTTTTGACGAGCATTGGTTCCATCAGAACAATCACTACCGAGGTACTACCACTACAGCCTCTGCCTCCGCCTCGCCGAACGATCTCTCACCGAATGCTGATGCTGCCGTTGAACACGTAACCATCGATCTCACTCTTCGCTTATGA

Coding sequence (CDS)

ATGGCGGACCCTGCCATTTATGACTTCCTTAGCCAAACGACTGCTTCTAATTCTGTACCGAAAACGACCTCCAGAAAATCTCAGTCTCAATACTCTTCCTCACGCATTTTTCCATGCCTTTACTGTCCTCGAAAATTCTACACTTCCCAAGCCCTAGGCGGCCACCAAAATGCTCACAAAAGAGAAAGAGCAGCTTCGCGTAAGGTCTTCACCTCTGAAATTCTTCACCTCGGTTCGCTTCAACACTCGAGGCCACCGCCGCCGCCGCCGACTACTTACCACCATCTTGCATCGCCGTCTGCTACAGCACTGGCTCCGTCGGCGCTTTTTGACGAGCATTGGTTCCATCAGAACAATCACTACCGAGGTACTACCACTACAGCCTCTGCCTCCGCCTCGCCGAACGATCTCTCACCGAATGCTGATGCTGCCGTTGAACACGTAACCATCGATCTCACTCTTCGCTTATGA

Protein sequence

MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKVFTSEILHLGSLQHSRPPPPPPTTYHHLASPSATALAPSALFDEHWFHQNNHYRGTTTTASASASPNDLSPNADAAVEHVTIDLTLRL

Homology

[Close]

BLAST of CmaCh11G015380 vs. ExPASy Swiss-Prot
Match: Q9FFX4 (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12
Identity = 40/70 (57.14%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 16 SNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKVFTSEIL 75
          + S  K  S  S +  +S R+FPC YCPRKFYTSQALGGHQNAHKRERAA+R+       
Sbjct: 17 TRSSSKRHSFSSSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR------- 76

Query: 76 HLGSLQHSRP 86
          +LG L +S P
Sbjct: 77 NLGVLANSPP 79

[Close]

BLAST of CmaCh11G015380 vs. ExPASy Swiss-Prot
Match: Q9FKA9 (Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.3e-11
Identity = 39/92 (42.39%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 20  PKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKVFTS-EILHLG 79
           P   + K+    SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+   + + ++  
Sbjct: 18  PSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAYDFVNNN 77

Query: 80  SLQHSRPPPPPPTTYHHLASPSATALAPSALF 111
              H+ P      + HHL      A A  A F
Sbjct: 78  DFLHTLPVFLSSPSQHHLTILGYPASASVACF 109

[Close]

BLAST of CmaCh11G015380 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.3e-09
Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 26  KSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKVFTSEILHLGSL--QHS 85
           KS    ++ R+F C YC RKFY+SQALGGHQNAHKRER  +++      +H+G +   H 
Sbjct: 48  KSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRA-----MHMGRMFGHHH 104

[Close]

BLAST of CmaCh11G015380 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 28 QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK 69
          Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++
Sbjct: 59 QEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 99

[Close]

BLAST of CmaCh11G015380 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-08
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 0


Query: 10  LSQTTASNSVPKTTSRKSQSQYS-SSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK 69
           L+   +S S      ++ Q Q S S R+F C YC RKFY+SQALGGHQNAHKRER  +++
Sbjct: 57  LTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 116

[Close]

BLAST of CmaCh11G015380 vs. ExPASy TrEMBL
Match: A0A6J1JQI7 (protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111486586 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.2e-82
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKVFTSEILHLGSLQHSRPPPPPPTTYHHLASPSATALAPSALFDEHWFHQNNH 120
           RERAASRKVFTSEILHLGSLQHSRPPPPPPTTYHHLASPSATALAPSALFDEHWFHQNNH
Sbjct: 61  RERAASRKVFTSEILHLGSLQHSRPPPPPPTTYHHLASPSATALAPSALFDEHWFHQNNH 120

Query: 121 YRGTTTTASASASPNDLSPNADAAVEHVTIDLTLRL 157
           YRGTTTTASASASPNDLSPNADAAVEHVTIDLTLRL
Sbjct: 121 YRGTTTTASASASPNDLSPNADAAVEHVTIDLTLRL 156

[Close]

BLAST of CmaCh11G015380 vs. ExPASy TrEMBL
Match: A0A6J1EJQ6 (protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111435120 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 3.8e-79
Identity = 152/156 (97.44%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKVFTSEILHLGSLQHSRPPPPPPTTYHHLASPSATALAPSALFDEHWFHQNNH 120
           RERAASRK FTSEILHLGSLQHSRPPPPPPTTYHHLASPS TALAPSALFDEHWFHQNNH
Sbjct: 61  RERAASRKAFTSEILHLGSLQHSRPPPPPPTTYHHLASPSTTALAPSALFDEHWFHQNNH 120

Query: 121 YRGTTTTASASASPNDLSPNADAAVEHVTIDLTLRL 157
           YRGTTTT  ASASPNDLSPNADAAVEHVTIDLTLRL
Sbjct: 121 YRGTTTT--ASASPNDLSPNADAAVEHVTIDLTLRL 154

[Close]

BLAST of CmaCh11G015380 vs. ExPASy TrEMBL
Match: A0A6J1F843 (protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111441721 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.3e-52
Identity = 123/170 (72.35%), Postives = 131/170 (77.06%), Query Frame = 0


Query: 1   MADPAIYDFLSQ-TTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH 60
           MADPAIYDFL+Q TTASNS PK  SRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH
Sbjct: 1   MADPAIYDFLTQTTTASNSAPK-ASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH 60

Query: 61  KRERAASRKVFTSEILHLGSLQHSRPPPPPP---TTYHHLASPSATA--------LAPSA 120
           KRERAASRK F SEILHLGSL    PPPPPP   TT+HHL  P   A         AP+ 
Sbjct: 61  KRERAASRKAFASEILHLGSL----PPPPPPTTTTTHHHLPQPYTVAPSPTPTPTPAPAD 120

Query: 121 LFDEHWFHQNNHYRGTTTT--ASASASPNDLSPNADAAVEHVTIDLTLRL 157
              +HWF+QN++   TTTT  ASASASP+ LSPNAD AVEHVTIDLTLRL
Sbjct: 121 FLGQHWFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL 165

[Close]

BLAST of CmaCh11G015380 vs. ExPASy TrEMBL
Match: A0A6J1J5R2 (protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111481997 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 8.3e-50
Identity = 121/168 (72.02%), Postives = 127/168 (75.60%), Query Frame = 0


Query: 1   MADPAIYDFLSQ-TTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH 60
           MADPAIYDFL+Q TTASNS PK  SRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH
Sbjct: 1   MADPAIYDFLTQTTTASNSAPK-ASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH 60

Query: 61  KRERAASRKVFTSEILHLGSLQHSRPPPPPPT--TYHHLASPSATALAPSA------LFD 120
           KRERAASRK F SEILHLGSL    PP P  T  T+HHL  P   A AP+          
Sbjct: 61  KRERAASRKAFASEILHLGSL----PPQPTTTTMTHHHLPQPYTVAPAPTPTPAPADFLG 120

Query: 121 EHWFHQNNHYRG---TTTTASASASPNDLSPNADAAVEHVTIDLTLRL 157
           +HWF+Q NHY     TTTTASASASP+ LSPN D AVEHVTIDLTLRL
Sbjct: 121 QHWFNQ-NHYSANTTTTTTASASASPDALSPNVDTAVEHVTIDLTLRL 162

[Close]

BLAST of CmaCh11G015380 vs. ExPASy TrEMBL
Match: A0A6J1DQT0 (zinc finger protein 6 OS=Momordica charantia OX=3673 GN=LOC111023386 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.1e-38
Identity = 102/158 (64.56%), Postives = 111/158 (70.25%), Query Frame = 0


Query: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLSQTT     PK  SRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTTTD---PK-PSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKVFTSEILHLGSLQHSRPPPPPPTTYHHLASPSATALAPSALFDEHW--FHQN 120
           RERAASRK F S++LH         PPPPP        PSA+    ++  DEHW   HQN
Sbjct: 61  RERAASRKPFHSDLLHFPPHHILNSPPPPP--------PSASPAMAASFLDEHWQLGHQN 120

Query: 121 NHYRGTTTTASASASPNDLSPNADAAVEHVTIDLTLRL 157
           +H       +SAS   + LSPNAD AVE+VTIDLTLRL
Sbjct: 121 HH---RAALSSASTPEDALSPNAD-AVENVTIDLTLRL 142

[Close]

BLAST of CmaCh11G015380 vs. NCBI nr
Match: XP_022989523.1 (protein LATE FLOWERING-like [Cucurbita maxima])

HSP 1 Score: 314.7 bits (805), Expect = 4.5e-82
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKVFTSEILHLGSLQHSRPPPPPPTTYHHLASPSATALAPSALFDEHWFHQNNH 120
           RERAASRKVFTSEILHLGSLQHSRPPPPPPTTYHHLASPSATALAPSALFDEHWFHQNNH
Sbjct: 61  RERAASRKVFTSEILHLGSLQHSRPPPPPPTTYHHLASPSATALAPSALFDEHWFHQNNH 120

Query: 121 YRGTTTTASASASPNDLSPNADAAVEHVTIDLTLRL 157
           YRGTTTTASASASPNDLSPNADAAVEHVTIDLTLRL
Sbjct: 121 YRGTTTTASASASPNDLSPNADAAVEHVTIDLTLRL 156

[Close]

BLAST of CmaCh11G015380 vs. NCBI nr
Match: KAG6588875.1 (Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305.8 bits (782), Expect = 2.1e-79
Identity = 154/160 (96.25%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKVFTSEILHLGSLQHSRPPPPPPTTYHHLASPSATALAPSALFDEHWFHQNNH 120
           RERAASRK FTSEILHLGSLQHSRPPPPPPTTYHHLASPS TALAPSALFDEHWFHQNNH
Sbjct: 61  RERAASRKAFTSEILHLGSLQHSRPPPPPPTTYHHLASPSTTALAPSALFDEHWFHQNNH 120

Query: 121 YRGTTTT----ASASASPNDLSPNADAAVEHVTIDLTLRL 157
           YRGTTTT    ASASASPNDLSPNADAAVEHVTIDLTLRL
Sbjct: 121 YRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL 160

[Close]

BLAST of CmaCh11G015380 vs. NCBI nr
Match: XP_022928226.1 (protein LATE FLOWERING-like [Cucurbita moschata])

HSP 1 Score: 303.9 bits (777), Expect = 7.9e-79
Identity = 152/156 (97.44%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKVFTSEILHLGSLQHSRPPPPPPTTYHHLASPSATALAPSALFDEHWFHQNNH 120
           RERAASRK FTSEILHLGSLQHSRPPPPPPTTYHHLASPS TALAPSALFDEHWFHQNNH
Sbjct: 61  RERAASRKAFTSEILHLGSLQHSRPPPPPPTTYHHLASPSTTALAPSALFDEHWFHQNNH 120

Query: 121 YRGTTTTASASASPNDLSPNADAAVEHVTIDLTLRL 157
           YRGTTTT  ASASPNDLSPNADAAVEHVTIDLTLRL
Sbjct: 121 YRGTTTT--ASASPNDLSPNADAAVEHVTIDLTLRL 154

[Close]

BLAST of CmaCh11G015380 vs. NCBI nr
Match: KAG7022634.1 (Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301.2 bits (770), Expect = 5.1e-78
Identity = 154/161 (95.65%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKVFTSEILHLGSLQHSR-PPPPPPTTYHHLASPSATALAPSALFDEHWFHQNN 120
           RERAASRK FTSEILHLGSLQHSR PPPPPPTTYHHLASPS TALAPSALFDEHWFHQNN
Sbjct: 61  RERAASRKAFTSEILHLGSLQHSRPPPPPPPTTYHHLASPSTTALAPSALFDEHWFHQNN 120

Query: 121 HYRGTTTT----ASASASPNDLSPNADAAVEHVTIDLTLRL 157
           HYRGTTTT    ASASASPNDLSPNADAAVEHVTIDLTLRL
Sbjct: 121 HYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL 161

[Close]

BLAST of CmaCh11G015380 vs. NCBI nr
Match: XP_023530190.1 (zinc finger protein 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 291.2 bits (744), Expect = 5.3e-75
Identity = 150/162 (92.59%), Postives = 150/162 (92.59%), Query Frame = 0


Query: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLSQT ASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTNASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKVFTSEILHLGSLQHSRPPPPPPTTYHHLASPSATALAPSALFDEHWFHQNNH 120
           RERAASRK FTSEILHLGSL HSR PPPPPTTYHHLASPSATA APS LFDEHWFHQNNH
Sbjct: 61  RERAASRKAFTSEILHLGSLHHSR-PPPPPTTYHHLASPSATAPAPSPLFDEHWFHQNNH 120

Query: 121 YRGTTTT------ASASASPNDLSPNADAAVEHVTIDLTLRL 157
           YRGTTTT      ASASASPNDLSPNADAAVEHVTIDLTLRL
Sbjct: 121 YRGTTTTVSASASASASASPNDLSPNADAAVEHVTIDLTLRL 161

[Close]

BLAST of CmaCh11G015380 vs. TAIR 10
Match: AT5G14010.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13
Identity = 40/70 (57.14%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 16 SNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKVFTSEIL 75
          + S  K  S  S +  +S R+FPC YCPRKFYTSQALGGHQNAHKRERAA+R+       
Sbjct: 17 TRSSSKRHSFSSSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR------- 76

Query: 76 HLGSLQHSRP 86
          +LG L +S P
Sbjct: 77 NLGVLANSPP 79

[Close]

BLAST of CmaCh11G015380 vs. TAIR 10
Match: AT5G48890.1 (C2H2-like zinc finger protein )

HSP 1 Score: 69.7 bits (169), Expect = 2.3e-12
Identity = 39/92 (42.39%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 20  PKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKVFTS-EILHLG 79
           P   + K+    SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+   + + ++  
Sbjct: 18  PSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAYDFVNNN 77

Query: 80  SLQHSRPPPPPPTTYHHLASPSATALAPSALF 111
              H+ P      + HHL      A A  A F
Sbjct: 78  DFLHTLPVFLSSPSQHHLTILGYPASASVACF 109

[Close]

BLAST of CmaCh11G015380 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 62.4 bits (150), Expect = 3.7e-10
Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 26  KSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKVFTSEILHLGSL--QHS 85
           KS    ++ R+F C YC RKFY+SQALGGHQNAHKRER  +++      +H+G +   H 
Sbjct: 48  KSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRA-----MHMGRMFGHHH 104

[Close]

BLAST of CmaCh11G015380 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 61.2 bits (147), Expect = 8.3e-10
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 28 QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK 69
          Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++
Sbjct: 59 QEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 99

[Close]

BLAST of CmaCh11G015380 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 59.7 bits (143), Expect = 2.4e-09
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 0


Query: 10  LSQTTASNSVPKTTSRKSQSQYS-SSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK 69
           L+   +S S      ++ Q Q S S R+F C YC RKFY+SQALGGHQNAHKRER  +++
Sbjct: 57  LTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 116

The following BLAST results are available for this feature:

BLAST of CmaCh11G015380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFX4	1.7e-12	57.14	Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1	[more]
Q9FKA9	3.3e-11	42.39	Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1	[more]
Q39266	5.3e-09	50.00	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q42485	1.2e-08	63.41	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39263	3.4e-08	51.67	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]

BLAST of CmaCh11G015380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JQI7	2.2e-82	100.00	protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111486586 PE=4 SV=...	[more]
A0A6J1EJQ6	3.8e-79	97.44	protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111435120 PE=4 S...	[more]
A0A6J1F843	2.3e-52	72.35	protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111441721 PE=4 S...	[more]
A0A6J1J5R2	8.3e-50	72.02	protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111481997 PE=4 SV=...	[more]
A0A6J1DQT0	1.1e-38	64.56	zinc finger protein 6 OS=Momordica charantia OX=3673 GN=LOC111023386 PE=4 SV=1	[more]

BLAST of CmaCh11G015380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989523.1	4.5e-82	100.00	protein LATE FLOWERING-like [Cucurbita maxima]	[more]
KAG6588875.1	2.1e-79	96.25	Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022928226.1	7.9e-79	97.44	protein LATE FLOWERING-like [Cucurbita moschata]	[more]
KAG7022634.1	5.1e-78	95.65	Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_023530190.1	5.3e-75	92.59	zinc finger protein 7-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh11G015380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14010.1	1.2e-13	57.14	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G48890.1	2.3e-12	42.39	C2H2-like zinc finger protein	[more]
AT1G24625.1	3.7e-10	50.00	zinc finger protein 7	[more]
AT1G80730.1	8.3e-10	63.41	zinc-finger protein 1	[more]
AT1G66140.1	2.4e-09	51.67	zinc finger protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 13..79 e-value: 7.5E-6 score: 27.7
None	No IPR available	PANTHER	PTHR45730:SF28	OS02G0182300 PROTEIN	coord: 17..156
None	No IPR available	PANTHER	PTHR45730	ZINC FINGER PROTEIN JAGGED	coord: 17..156
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 39..59
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 37..64 score: 10.595541
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 34..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G015380.1	CmaCh11G015380.1	mRNA