CmaCh11G014700 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G014700
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial
Location	Cma_Chr11: 9682413 .. 9685973 (-)
RNA-Seq Expression	CmaCh11G014700
Synteny	CmaCh11G014700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCCACTCTTCCTTCTTCCTACATCTGATAGGTTCTTTGTTTCTCTCTCTGTCTCTCCATTTCTCTTTCTTCGAGGCAACAATGGCGACTGGAATCCTGAGGAGGGCAATATCTAGGGTTTCTGCAACTTCACCTTCAAGATTCCTTCGAATTCGAGCTCACGCTTCCGAAGCCGGAGCGCAGAAAGTGGAGCAAAAAGCAGCCGTCTCTTCAACGCTTAAGACGTTCGCTATCTACCGATGGAACCCCGATAGCCCTTCCAAACCAGAGCTTAAGGAGTACAAGATCGATCTAAAAGACTGTGGTCCTATGGTGCTCGATGCTCTAATCAAAATCAAGAATGAGATCGATCCGACTCTGACCTTCCGCCGCTCGTGCCGAGAGGGGATCTGCGGGTCCTGTGCGATGAACATCGATGGATGTAATGGTTTGGCTTGCTTGACGAAGATTCCATCCGATGCTTCGTCGACGATTACGCCGCTGCCTCATATGTTCGTGATCAAGGATCTGGTGGTGGATATGACGAATTTTTATAACCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGAGCGAGCCGTCTGTGCCGGGGAAGGAGATTCTTCAGAGTAAGCAAGATAGGGCTAAGTTGGATGGGATGTATGAATGTATTTTGTGTGCATGCTGTAGTACATCGTGCCCCAGCTATTGGTGGAACCCGGAGTCATATCTTGGACCAGCTGCCTTGCTCCATGCCAATAGGTAATTTCCCCACTTTTGTTCTTCGTTTATTCTTTGATTCTCTGTTTGCTAGAAATGAATAGAAAACAGGGTCTGTATAGAGGAATTAAGAAGCTACTTTTGAAGGATGTATATGGGTGTTCATGCTTATTCCTGAACTTTTGGAAGATTCAGAATCGTATTTATTAAGTTTCATTTTGTTGGATTGAAAGTTGGCAGCAATAGTTTGGTAATTTAGGTACTCTATTTGAGGGCTTAAGTGCGTTTTGAGGAGCTAGAAAACGTGTAAATCCAAAGCATTAAAATGGTCTTTTATTGAAGATTTCCAAGGGAAAGAAAAGTTAACAACGAATGAAGAGAGCTTATCAAAAGAAGGGAAATTTTATATATGGAAATGAGAGGAGGAAGAACAGTCATGGGGGTATCAAAAGGAATTGAAGAAACTGGAGAACTTATTGAGGTGTGTTCAGATCCCATTTGTAGGCCTGGAGGTTGGGCACAGCATCTGTCGAGGTGTGTGTAGGTCGGGGATCGTTCTTAGTACGGTCCTACAATTATCATATTTAAAAGCCCTTACGGTACTAACAAATCAGTAGTTTCTTATTTCACACAACTCTTGCCTCATCAAGGATTAGTCTGGTTATGTCCTCTCAGTTCCTAGAAGGTGCTTTCGGTCTCCTGCTTGGAAAATAAGCCCTTGCGTGGTAGGACATTTATGATTTGATCGGGTGTCTATTGTATAGAGAATCAAGTAATTTCATTTGGTTGCTTTATCTATGTTCGACAAAGGCTTGGATGCCTTGGTAGACTTAATCTGAAACTCATTTGTTTGCCTTAGTTTCTTGGTGGGTTTGAATCTTAGTTGTGAGATCCCTCATCGGTTGGAGAGGGGAACAAAGCATTCCTTATAAGAGTGTGGAAACCTCTCTCTAGCATATGCGTTTTAAAACCTTGAGAGGAAGCCCAAAGAGGACAATATCTGCTAGCATTACATTAGTCCTTACGTTTTAGTAGTTCAATTAGTGGAGTGTGGAGGATGTCTGAAAAGTTTTGCTGATATTGCATAAAAGAGTTTTTGATCCACAACAATTACTCAAGAACATGATAGTAAGCTTTATTCGTGACGTTTGGAAGCCAAAATTTGAATATGATATTGTAACGGTCCAGATCCATCACTAGTAGATATTGTCATTTTTGGGTGTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGCGTCTGCTAGGGAAAGGTTTCCACACTTATAAAGGGTGATCGTTCTCCTCCCCAACCAATGTGAGATATCAAAGATATGCTTCCTACGACAATCAAAGAGCTCAACCTTTTATAGATGACTGCTCAGGAAACTTTTCTTCATCATTTTACTGACCTCCTACATCAGGGAGAAAGTCGTACATGTTCTATGTGGTATTAGTTTGTTGAATGCATTGTAATCATATGAGAACTTAGAATCAATAACCGCCTAGAGTTGGCTTATAGTAAGGACCCATATAAATAATATAAATAATGTAGATCTTAGAGGCAATGGTTCAAACCATGATGGCCAATGGCCATTTACTTAGAATTTAATTTCTACAAATTTCATCCCTTGGAATTTACTTAGAAGCAAAGGTAATTGCATGATTTATTTGTTCCGTTCTTTCACCTCACAGTGTTCTAATTACAAAACTGTCCCTTTCATTCCCCTTTGTACATGCAGGTGGATAAGTGATAGTCGTGACGAATTCACCAAGGAGCGGCTCGAGGCAATAAATGACGAATTCAAGCTCTATCGTTGTCATACCATACTGAACTGTGCCCGTGCCTGTCCGAAGGGTTTGAATCCTGGAAAACAGATTCAACATATCAAACGCCTTCAGCTCGTGGGCTGAGCCTAAGTTTCAAGGTACACGAAACACAATAATGTTCTTTTCATTCAGTTATGGAATGAATATCTTGTGAGAACTCATGAGCAATGTGATTTTGATCTAATAACTTGTGGATCATTGACTTTCCACACTTTCTGTACTTAAGATTTGATCTTTAGTATTTATCTGTCTCCAAATAAATGTTGACAGAAACCTCCTGGCTTCTCGAGTTGTCGTTCTGCGATCATCCTTTATTCTTTTTATTTGATAAAAAAATTATGCTCCGTTTTCATTTCCCAGTTCGATCACCTTCCTGTGTCGAAACTGCCATAGTTTAAGCATCCATCTTGTAACGGCCTAGGCCCACCGCTAGCAGATATTGTTCTCTTTGGACTTTTCCTTTTAGGCTTCTCTTCTATGTTTTTAAAATGCATCTTCCAGTGAGAAGTTTCTACACCCTTATAATGAGTGTTTTGTTCTCCTTCCCAACCAATGTGGGATCTCACAATCTACCTCTCTTCAGGGCCTAACGTCTTCATTGACACTCGTTCCTTTCTCCAATCGATGTGGGACCCCCACCAAATCCACCCTCTTTGAGGTCATGCGTCCTTGCTGGCACATCGCCTCGTGTCTACTCCCCTTCGAGTGACAGCTTCCTCTCTAGCACATCGCTCAGTGTCTGACTTTGATACCAATTGTAACGGCTCAGGCCCACTGCTAGCATAGAGAAGTTTTCACACCCTTATAAAGGTCGAATAGTTCGGTTTTAAACCGAAACCTAAGAGCCCATTGGTTGTTTTTGTTCAAAACATCCGAAAGCATGATCTTGTGCACACCCTGGTTGCCATCATGAACTTCAAATTCTAGTGTAATTTTTTTTTTAACTGAATGTTCGAATTATAAATGAACACTTCGGATGCTATCGTTTTTTTACCTTAGGTGGTTTGGATGCTATCATTTTTTAACCACTC

mRNA sequence

AGCCACTCTTCCTTCTTCCTACATCTGATAGGTTCTTTGTTTCTCTCTCTGTCTCTCCATTTCTCTTTCTTCGAGGCAACAATGGCGACTGGAATCCTGAGGAGGGCAATATCTAGGGTTTCTGCAACTTCACCTTCAAGATTCCTTCGAATTCGAGCTCACGCTTCCGAAGCCGGAGCGCAGAAAGTGGAGCAAAAAGCAGCCGTCTCTTCAACGCTTAAGACGTTCGCTATCTACCGATGGAACCCCGATAGCCCTTCCAAACCAGAGCTTAAGGAGTACAAGATCGATCTAAAAGACTGTGGTCCTATGGTGCTCGATGCTCTAATCAAAATCAAGAATGAGATCGATCCGACTCTGACCTTCCGCCGCTCGTGCCGAGAGGGGATCTGCGGGTCCTGTGCGATGAACATCGATGGATGTAATGGTTTGGCTTGCTTGACGAAGATTCCATCCGATGCTTCGTCGACGATTACGCCGCTGCCTCATATGTTCGTGATCAAGGATCTGGTGGTGGATATGACGAATTTTTATAACCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGAGCGAGCCGTCTGTGCCGGGGAAGGAGATTCTTCAGAGTAAGCAAGATAGGGCTAAGTTGGATGGGATGTATGAATGTATTTTGTGTGCATGCTGTAGTACATCGTGCCCCAGCTATTGGTGGAACCCGGAGTCATATCTTGGACCAGCTGCCTTGCTCCATGCCAATAGGTGGATAAGTGATAGTCGTGACGAATTCACCAAGGAGCGGCTCGAGGCAATAAATGACGAATTCAAGCTCTATCGTTGTCATACCATACTGAACTGTGCCCGTGCCTGTCCGAAGGGTTTGAATCCTGGAAAACAGATTCAACATATCAAACGCCTTCAGCTCGTGGGCTGAGCCTAAGTTTCAAGGTACACGAAACACAATAATGTTCTTTTCATTCAGTTATGGAATGAATATCTTGTGAGAACTCATGAGCAATGTGATTTTGATCTAATAACTTGTGGATCATTGACTTTCCACACTTTCTGTACTTAAGATTTGATCTTTAGTATTTATCTGTCTCCAAATAAATGTTGACAGAAACCTCCTGGCTTCTCGAGTTGTCGTTCTGCGATCATCCTTTATTCTTTTTATTTGATAAAAAAATTATGCTCCGTTTTCATTTCCCAGTTCGATCACCTTCCTGTGTCGAAACTGCCATAGTTTAAGCATCCATCTTGTAACGGCCTAGGCCCACCGCTAGCAGATATTGTTCTCTTTGGACTTTTCCTTTTAGGCTTCTCTTCTATGTTTTTAAAATGCATCTTCCAGTGAGAAGTTTCTACACCCTTATAATGAGTGTTTTGTTCTCCTTCCCAACCAATGTGGGATCTCACAATCTACCTCTCTTCAGGGCCTAACGTCTTCATTGACACTCGTTCCTTTCTCCAATCGATGTGGGACCCCCACCAAATCCACCCTCTTTGAGGTCATGCGTCCTTGCTGGCACATCGCCTCGTGTCTACTCCCCTTCGAGTGACAGCTTCCTCTCTAGCACATCGCTCAGTGTCTGACTTTGATACCAATTGTAACGGCTCAGGCCCACTGCTAGCATAGAGAAGTTTTCACACCCTTATAAAGGTCGAATAGTTCGGTTTTAAACCGAAACCTAAGAGCCCATTGGTTGTTTTTGTTCAAAACATCCGAAAGCATGATCTTGTGCACACCCTGGTTGCCATCATGAACTTCAAATTCTAGTGTAATTTTTTTTTTAACTGAATGTTCGAATTATAAATGAACACTTCGGATGCTATCGTTTTTTTACCTTAGGTGGTTTGGATGCTATCATTTTTTAACCACTC

Coding sequence (CDS)

ATGGCGACTGGAATCCTGAGGAGGGCAATATCTAGGGTTTCTGCAACTTCACCTTCAAGATTCCTTCGAATTCGAGCTCACGCTTCCGAAGCCGGAGCGCAGAAAGTGGAGCAAAAAGCAGCCGTCTCTTCAACGCTTAAGACGTTCGCTATCTACCGATGGAACCCCGATAGCCCTTCCAAACCAGAGCTTAAGGAGTACAAGATCGATCTAAAAGACTGTGGTCCTATGGTGCTCGATGCTCTAATCAAAATCAAGAATGAGATCGATCCGACTCTGACCTTCCGCCGCTCGTGCCGAGAGGGGATCTGCGGGTCCTGTGCGATGAACATCGATGGATGTAATGGTTTGGCTTGCTTGACGAAGATTCCATCCGATGCTTCGTCGACGATTACGCCGCTGCCTCATATGTTCGTGATCAAGGATCTGGTGGTGGATATGACGAATTTTTATAACCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGAGCGAGCCGTCTGTGCCGGGGAAGGAGATTCTTCAGAGTAAGCAAGATAGGGCTAAGTTGGATGGGATGTATGAATGTATTTTGTGTGCATGCTGTAGTACATCGTGCCCCAGCTATTGGTGGAACCCGGAGTCATATCTTGGACCAGCTGCCTTGCTCCATGCCAATAGGTGGATAAGTGATAGTCGTGACGAATTCACCAAGGAGCGGCTCGAGGCAATAAATGACGAATTCAAGCTCTATCGTTGTCATACCATACTGAACTGTGCCCGTGCCTGTCCGAAGGGTTTGAATCCTGGAAAACAGATTCAACATATCAAACGCCTTCAGCTCGTGGGCTGA

Protein sequence

MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG

Homology

[Close]

BLAST of CmaCh11G014700 vs. ExPASy Swiss-Prot
Match: Q8LB02 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-2 PE=1 SV=2)

HSP 1 Score: 458.0 bits (1177), Expect = 7.6e-128
Identity = 219/280 (78.21%), Postives = 244/280 (87.14%), Query Frame = 0


Query: 1   MATGILRRAISRVSA--TSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDS 60
           MA G++ R +   S+  ++ +R +  R  ++ + AQ         ++LKTF IYRWNPD+
Sbjct: 1   MAFGLIGRVVGTKSSRLSTAARLIPARWTSTGSEAQSKASTGGGGASLKTFQIYRWNPDN 60

Query: 61  PSKPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLA 120
           P KPEL++YKIDLKDCGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 61  PGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA 120

Query: 121 CLTKIPSDA-SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQS 180
           CLTKI S +  +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+  SVPGKEILQS
Sbjct: 121 CLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQS 180

Query: 181 KQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEA 240
           K+DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEA
Sbjct: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240

Query: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 278
           I+DEFKLYRCHTILNCARACPKGLNPGKQI HIK+LQ  G
Sbjct: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQKSG 280

[Close]

BLAST of CmaCh11G014700 vs. ExPASy Swiss-Prot
Match: Q8LBZ7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-1 PE=1 SV=2)

HSP 1 Score: 453.4 bits (1165), Expect = 1.9e-126
Identity = 218/278 (78.42%), Postives = 238/278 (85.61%), Query Frame = 0


Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQ---KVEQKAAVSSTLKTFAIYRWNPD 60
           MA+G++ R +    +   +    I A  +  GA+   K        S LKTF IYRWNPD
Sbjct: 1   MASGLIGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPD 60

Query: 61  SPSKPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120
           +P KPEL+ Y+IDLKDCGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  NPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSDAS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQ 180
           ACLTKI  +AS +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+  SVP KEILQ
Sbjct: 121 ACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQ 180

Query: 181 SKQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLE 240
           SK+DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLE
Sbjct: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240

Query: 241 AINDEFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQ 275
           AI+DEFKLYRCHTILNCARACPKGLNPGKQI HIK+LQ
Sbjct: 241 AIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]

BLAST of CmaCh11G014700 vs. ExPASy Swiss-Prot
Match: Q9S827 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH2-1 PE=1 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 1.0e-116
Identity = 205/279 (73.48%), Postives = 228/279 (81.72%), Query Frame = 0


Query: 2   ATGILRRAISRVSATSP---SRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDS 61
           A  +LRR+ +  +  SP   SR +  + H+S         KA  ++  KTF+IYRW+PDS
Sbjct: 3   AAALLRRSPAARALLSPALSSRLVASKPHSSSPAPPPPPSKAGANT--KTFSIYRWDPDS 62

Query: 62  PS-KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 121
           PS KP LK+YK+DL DCGPMVLD L+KIKNE DP+LTFRRSCREGICGSCAMNIDG NGL
Sbjct: 63  PSTKPHLKDYKVDLSDCGPMVLDVLLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGL 122

Query: 122 ACLTKIPSDAS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQ 181
           ACLTKI S +S STI+PLPHMFVIKDLVVDMTNFYNQYKS+EPWLKRK  P  PGKEI Q
Sbjct: 123 ACLTKISSASSASTISPLPHMFVIKDLVVDMTNFYNQYKSVEPWLKRKDAPPQPGKEIPQ 182

Query: 182 SKQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLE 241
           +K DRAKLDGMYECILCACCSTSCPSYWWNPE YLGPAALLHANRWI DSRD+FTKERL+
Sbjct: 183 TKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDQFTKERLD 242

Query: 242 AINDEFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQL 276
           +INDEFKLYRCHTI NC  ACPKGLNP K I  IK+LQL
Sbjct: 243 SINDEFKLYRCHTIKNCTHACPKGLNPAKHIDTIKKLQL 279

[Close]

BLAST of CmaCh11G014700 vs. ExPASy Swiss-Prot
Match: Q6FWS8 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=SDH2 PE=3 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 7.2e-94
Identity = 160/230 (69.57%), Postives = 182/230 (79.13%), Query Frame = 0


Query: 46  LKTFAIYRWNPDSPS-KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGIC 105
           LKTF IYRWNPD P+ KP L+EYK+DL+DCGPMVLDAL+KIKNE D TLTFRRSCREGIC
Sbjct: 20  LKTFKIYRWNPDKPTEKPHLQEYKVDLEDCGPMVLDALLKIKNEQDATLTFRRSCREGIC 79

Query: 106 GSCAMNIDGCNGLACLTKIPSDASST--ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLK 165
           GSCAMNI G N LACL KI  D S T  I PLPHMF++KDLV D+T FY QYKSI+P+L+
Sbjct: 80  GSCAMNIGGANTLACLCKIDQDESKTTKIYPLPHMFIVKDLVPDLTGFYQQYKSIQPYLQ 139

Query: 166 RKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRW 225
           R   P+  GKE+LQS  DR KLDG+YECILCACCSTSCPSYWWN E YLGPA L+ A RW
Sbjct: 140 RTDYPA-DGKEVLQSIDDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLMQAYRW 199

Query: 226 ISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQHIKR 273
           + DSRD+ TK R   + +   LYRCHTI+NC R CPKGLNPG+ I  IK+
Sbjct: 200 LIDSRDQATKARRTMLQNSMSLYRCHTIMNCTRTCPKGLNPGRSIAEIKK 248

[Close]

BLAST of CmaCh11G014700 vs. ExPASy Swiss-Prot
Match: Q9YHT2 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Gallus gallus OX=9031 GN=SDHB PE=1 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 7.2e-94
Identity = 167/268 (62.31%), Postives = 197/268 (73.51%), Query Frame = 0


Query: 18  PSRFLRI---------RAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSP-SKPELKEY 77
           P+RFLR            H    GAQ     AA +S +K F+IYRW+PD P  KP ++ Y
Sbjct: 15  PARFLRAGLRPVRGLEAVHGICRGAQTA---AAATSRIKKFSIYRWDPDKPGDKPRMQTY 74

Query: 78  KIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSDA 137
           ++DL  CGPMVLDALIKIKNE+D TLTFRRSCREGICGSCAMNI G N LAC  KI  D 
Sbjct: 75  EVDLNKCGPMVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDL 134

Query: 138 SST--ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLD 197
           S T  I PLPHM+V+KDLV D++NFY QYKSIEP+LK+K E     ++ LQS +DR KLD
Sbjct: 135 SKTTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESKQGKEQYLQSIEDRQKLD 194

Query: 198 GMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLY 257
           G+YECILCACCSTSCPSYWWN + YLGPA L+ A RW+ DSRD++T+ERL  + D F LY
Sbjct: 195 GLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDPFSLY 254

Query: 258 RCHTILNCARACPKGLNPGKQIQHIKRL 274
           RCHTI+NC R CPKGLNPGK I  IK++
Sbjct: 255 RCHTIMNCTRTCPKGLNPGKAIAEIKKM 279

[Close]

BLAST of CmaCh11G014700 vs. ExPASy TrEMBL
Match: A0A6J1JPN7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111486619 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 2.7e-160
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60
           MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60

Query: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180
           TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD
Sbjct: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 277

[Close]

BLAST of CmaCh11G014700 vs. ExPASy TrEMBL
Match: A0A6J1EJ68 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111435079 PE=3 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 2.1e-157
Identity = 272/277 (98.19%), Postives = 275/277 (99.28%), Query Frame = 0


Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60
           MATGILRRAISRVSAT PSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60

Query: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPEL+EYKIDLK+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180
           TKIPSD SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD
Sbjct: 121 TKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQ+IKRLQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG 277

[Close]

BLAST of CmaCh11G014700 vs. ExPASy TrEMBL
Match: A0A6J1F9C7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111441997 PE=3 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 3.9e-151
Identity = 259/277 (93.50%), Postives = 271/277 (97.83%), Query Frame = 0


Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60
           MA+GILRRAI+RVSATSPSRF+RIRAHAS A AQ+VEQKAA S+ LKTFAIYRWNPDSPS
Sbjct: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPDSPS 60

Query: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPEL+EYKIDLK+CGPMVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180
           TKIPS ASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEP VPGKEILQSK+D
Sbjct: 121 TKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQ+IK+LQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]

BLAST of CmaCh11G014700 vs. ExPASy TrEMBL
Match: E5GCD7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.5e-150
Identity = 258/277 (93.14%), Postives = 268/277 (96.75%), Query Frame = 0


Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60
           MATGILRR +SRVSA+SPSRF+RIRAHASEA AQ+VEQKA  SS LKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRVLSRVSASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSPS 60

Query: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPEL+EYKIDLK+CGPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180
           TKIPS  SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEP VPGKEILQSK+D
Sbjct: 121 TKIPSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQHIK LQL+G
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQLLG 277

[Close]

BLAST of CmaCh11G014700 vs. ExPASy TrEMBL
Match: A0A1S3BP14 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103491745 PE=3 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.5e-150
Identity = 258/277 (93.14%), Postives = 268/277 (96.75%), Query Frame = 0


Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60
           MATGILRR +SRVSA+SPSRF+RIRAHASEA AQ+VEQKA  SS LKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRVLSRVSASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSPS 60

Query: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPEL+EYKIDLK+CGPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180
           TKIPS  SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEP VPGKEILQSK+D
Sbjct: 121 TKIPSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQSKKD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQHIK LQL+G
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQLLG 277

[Close]

BLAST of CmaCh11G014700 vs. NCBI nr
Match: XP_022989559.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 574.3 bits (1479), Expect = 5.6e-160
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60
           MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60

Query: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180
           TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD
Sbjct: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 277

[Close]

BLAST of CmaCh11G014700 vs. NCBI nr
Match: XP_023530873.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 569.7 bits (1467), Expect = 1.4e-158
Identity = 275/277 (99.28%), Postives = 276/277 (99.64%), Query Frame = 0


Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60
           MATGILRRAISRVSAT PSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60

Query: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180
           TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD
Sbjct: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQ+IKRLQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG 277

[Close]

BLAST of CmaCh11G014700 vs. NCBI nr
Match: KAG6588927.1 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 568.2 bits (1463), Expect = 4.0e-158
Identity = 274/277 (98.92%), Postives = 276/277 (99.64%), Query Frame = 0


Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60
           MATGILRRAISRVSAT PSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60

Query: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELKEYKIDLK+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELKEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180
           TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD
Sbjct: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQ+IKRLQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG 277

[Close]

BLAST of CmaCh11G014700 vs. NCBI nr
Match: KAG7022695.1 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 565.5 bits (1456), Expect = 2.6e-157
Identity = 272/276 (98.55%), Postives = 275/276 (99.64%), Query Frame = 0


Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60
           MATGILRRAISRVSAT PSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60

Query: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPELKEYKIDLK+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELKEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180
           TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD
Sbjct: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLV 277
           EFKLYRCHTILNCARACPKGLNPGKQIQ+IKRLQL+
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLI 276

[Close]

BLAST of CmaCh11G014700 vs. NCBI nr
Match: XP_022928182.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 564.7 bits (1454), Expect = 4.4e-157
Identity = 272/277 (98.19%), Postives = 275/277 (99.28%), Query Frame = 0


Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60
           MATGILRRAISRVSAT PSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS
Sbjct: 1   MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS 60

Query: 61  KPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120
           KPEL+EYKIDLK+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 121 TKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180
           TKIPSD SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD
Sbjct: 121 TKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQD 180

Query: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240
           RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND
Sbjct: 181 RAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAIND 240

Query: 241 EFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 278
           EFKLYRCHTILNCARACPKGLNPGKQIQ+IKRLQLVG
Sbjct: 241 EFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG 277

[Close]

BLAST of CmaCh11G014700 vs. TAIR 10
Match: AT5G40650.1 (succinate dehydrogenase 2-2 )

HSP 1 Score: 458.0 bits (1177), Expect = 5.4e-129
Identity = 219/280 (78.21%), Postives = 244/280 (87.14%), Query Frame = 0


Query: 1   MATGILRRAISRVSA--TSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDS 60
           MA G++ R +   S+  ++ +R +  R  ++ + AQ         ++LKTF IYRWNPD+
Sbjct: 1   MAFGLIGRVVGTKSSRLSTAARLIPARWTSTGSEAQSKASTGGGGASLKTFQIYRWNPDN 60

Query: 61  PSKPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLA 120
           P KPEL++YKIDLKDCGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 61  PGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA 120

Query: 121 CLTKIPSDA-SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQS 180
           CLTKI S +  +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+  SVPGKEILQS
Sbjct: 121 CLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQS 180

Query: 181 KQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEA 240
           K+DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEA
Sbjct: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240

Query: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 278
           I+DEFKLYRCHTILNCARACPKGLNPGKQI HIK+LQ  G
Sbjct: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQKSG 280

[Close]

BLAST of CmaCh11G014700 vs. TAIR 10
Match: AT3G27380.1 (succinate dehydrogenase 2-1 )

HSP 1 Score: 453.4 bits (1165), Expect = 1.3e-127
Identity = 218/278 (78.42%), Postives = 238/278 (85.61%), Query Frame = 0


Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQ---KVEQKAAVSSTLKTFAIYRWNPD 60
           MA+G++ R +    +   +    I A  +  GA+   K        S LKTF IYRWNPD
Sbjct: 1   MASGLIGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPD 60

Query: 61  SPSKPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120
           +P KPEL+ Y+IDLKDCGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  NPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSDAS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQ 180
           ACLTKI  +AS +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+  SVP KEILQ
Sbjct: 121 ACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQ 180

Query: 181 SKQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLE 240
           SK+DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLE
Sbjct: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240

Query: 241 AINDEFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQ 275
           AI+DEFKLYRCHTILNCARACPKGLNPGKQI HIK+LQ
Sbjct: 241 AIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]

BLAST of CmaCh11G014700 vs. TAIR 10
Match: AT3G27380.2 (succinate dehydrogenase 2-1 )

HSP 1 Score: 453.4 bits (1165), Expect = 1.3e-127
Identity = 218/278 (78.42%), Postives = 238/278 (85.61%), Query Frame = 0


Query: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQ---KVEQKAAVSSTLKTFAIYRWNPD 60
           MA+G++ R +    +   +    I A  +  GA+   K        S LKTF IYRWNPD
Sbjct: 1   MASGLIGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPD 60

Query: 61  SPSKPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120
           +P KPEL+ Y+IDLKDCGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  NPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSDAS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQ 180
           ACLTKI  +AS +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+  SVP KEILQ
Sbjct: 121 ACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQ 180

Query: 181 SKQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLE 240
           SK+DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLE
Sbjct: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240

Query: 241 AINDEFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQ 275
           AI+DEFKLYRCHTILNCARACPKGLNPGKQI HIK+LQ
Sbjct: 241 AIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]

BLAST of CmaCh11G014700 vs. TAIR 10
Match: AT5G65165.1 (succinate dehydrogenase 2-3 )

HSP 1 Score: 315.1 bits (806), Expect = 5.7e-86
Identity = 152/244 (62.30%), Postives = 180/244 (73.77%), Query Frame = 0


Query: 37  EQKAAVSSTLKTFAIYRWNPDSP-SKPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTF 96
           E++       K F IYRWNPD P SKP L+ + +DL  CGPMVLD L KIK E D +L++
Sbjct: 57  EKEGQHKEVKKEFKIYRWNPDKPNSKPFLQSFFVDLSSCGPMVLDVLQKIKAEDDASLSY 116

Query: 97  RRSCREGICGSCAMNIDGCNGLACLTKIPSDAS--STITPLPHMFVIKDLVVDMTNFYNQ 156
           RRSCREGICGSC+MNIDG N +ACL  I  + S  + ITPLPHM+VIKDLVVD+TNFY Q
Sbjct: 117 RRSCREGICGSCSMNIDGTNTVACLKPINPNTSKPTIITPLPHMYVIKDLVVDLTNFYQQ 176

Query: 157 YKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGP 216
           YKS+EPWLK +  P   G+E  QS +DR KLDG+YECILCACC+TSCPSYWWNPE + GP
Sbjct: 177 YKSMEPWLKTRKPPK-DGREHRQSPKDRKKLDGLYECILCACCTTSCPSYWWNPEEFPGP 236

Query: 217 AALLHANRWISDSRDEFTKERLEAIND-EFKLYRCHTILNCARACPKGLNPGKQIQHIKR 276
           AALL A RWISDSRDE+ +ERL+AI + E K+YRC  I NC   CPKGLNP   I  +K 
Sbjct: 237 AALLQAYRWISDSRDEYREERLQAITESETKVYRCRAIKNCTATCPKGLNPASAILKMKS 296

The following BLAST results are available for this feature:

BLAST of CmaCh11G014700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB02	7.6e-128	78.21	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Ara...	[more]
Q8LBZ7	1.9e-126	78.42	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ara...	[more]
Q9S827	1.0e-116	73.48	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ory...	[more]
Q6FWS8	7.2e-94	69.57	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Candi...	[more]
Q9YHT2	7.2e-94	62.31	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Gallu...	[more]

BLAST of CmaCh11G014700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JPN7	2.7e-160	100.00	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucur...	[more]
A0A6J1EJ68	2.1e-157	98.19	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucur...	[more]
A0A6J1F9C7	3.9e-151	93.50	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucur...	[more]
E5GCD7	1.5e-150	93.14	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucum...	[more]
A0A1S3BP14	1.5e-150	93.14	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucum...	[more]

BLAST of CmaCh11G014700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989559.1	5.6e-160	100.00	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [...	[more]
XP_023530873.1	1.4e-158	99.28	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [...	[more]
KAG6588927.1	4.0e-158	98.92	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial, parti...	[more]
KAG7022695.1	2.6e-157	98.55	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucur...	[more]
XP_022928182.1	4.4e-157	98.19	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [...	[more]

BLAST of CmaCh11G014700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40650.1	5.4e-129	78.21	succinate dehydrogenase 2-2	[more]
AT3G27380.1	1.3e-127	78.42	succinate dehydrogenase 2-1	[more]
AT3G27380.2	1.3e-127	78.42	succinate dehydrogenase 2-1	[more]
AT5G65165.1	5.7e-86	62.30	succinate dehydrogenase 2-3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13534	Fer4_17	coord: 189..262 e-value: 1.8E-9 score: 38.0
None	No IPR available	PANTHER	PTHR11921	SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN	coord: 7..274
None	No IPR available	PANTHER	PTHR11921:SF44	SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT, MITOCHONDRIAL	coord: 7..274
None	No IPR available	SUPERFAMILY	46548	alpha-helical ferredoxin	coord: 147..273
IPR009051	Alpha-helical ferredoxin	GENE3D	1.10.1060.10		coord: 147..276 e-value: 7.2E-53 score: 179.9
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 37..146 e-value: 5.7E-40 score: 137.7
IPR025192	Succinate dehydogenase/fumarate reductase N-terminal	PFAM	PF13085	Fer2_3	coord: 48..151 e-value: 5.0E-32 score: 110.1
IPR004489	Succinate dehydrogenase/fumarate reductase iron-sulphur protein	TIGRFAM	TIGR00384	TIGR00384	coord: 51..271 e-value: 2.0E-83 score: 277.1
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 99..107
IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	PROSITE	PS00198	4FE4S_FER_1	coord: 190..201
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 60..137 score: 9.469634
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 78..112 e-value: 0.00748601 score: 33.1372
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PROSITE	PS51379	4FE4S_FER_2	coord: 180..210 score: 7.894782
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 45..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G014700.1	CmaCh11G014700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022904	respiratory electron transport chain
biological_process	GO:0006099	tricarboxylic acid cycle
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0045273	respiratory chain complex II
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0051538	3 iron, 4 sulfur cluster binding
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008177	succinate dehydrogenase (ubiquinone) activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0016491	oxidoreductase activity