CmaCh11G012060 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G012060
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Cytochrome f
Location	Cma_Chr11: 7294068 .. 7299116 (-)
RNA-Seq Expression	CmaCh11G012060
Synteny	CmaCh11G012060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCAAAACATTCCTAGTCATAGTGACAATTCTAGTTACAGTACCGTTGATGATTTAGTCGGCCGACATTCGGTCGGATCTGATGACACTTTTTTAATTAGGGATAGTAATAGCAGCAGTCATTCCATTTGGATAGTGAAAGAGAGAGAGACTATGATCGTTACATGGATGATACTATATATATATATAGTTTAATTGGAATAATCACATTAATAGTTGCATTGACAGTTATCTTCAGGCTCAAATCTGTATTGATAGTGACTTTTTAAGTGGTAGTCACAATTAGAGTGACAGTTACGTTTATAGTGACATTTGTGGCTCAGGTGCAAATAGTAGTGAAAGTGAGAGTTCCAATATAAGAACTAGCACGGATGGAAGTGATTTAACTAGAATGGAGAGTTCTACGGAAAGTGATACGTCAAGTTCTACGGAAAGTTCTAATGATCTAGATGGAACTCAAACAAGCATTTGTGGGTTCAATGCGCAAATTGTTATGGATTCAATTATAAGAAGGATTTGAAATAAAAAATGAATATTTGTGAACAATGTGGATACCATTTGAAAATGAGTAGTTCAGATAGAATCGAACTTTTGATTGATCCAGCCAGGTACTTGGGACCCTATGGATGAAGACATGGTCTCTTTAGATCCCATTGAATTTCATTCGGAGGAGGAACCTTATAAAGATCGTATTGATTCTTATCAAATAAAGACAGGATTAACTAACTGAGGCTATTCAAAGAGGCACAGGTAAATGAAACGGTATTACTATAGCAATTGGGATTATGGATTTTTCGTTTATGGGGGTGGGATCTGTAGTAGGCGAGAGAATCACCCGTTTGATCGAGTATGCTACAAATCAATCAATTTTGACCTCTGATTTGAGTGTGTGCTTCTGGAGGAGCACGCATGCAAGAAGGAAGGAAGTGTGAGCTTGATGCAAATGTCAAAAAGATCTGCTTTATATGATTATCAATCAAATAAAAGATTCTTCTATGTAGCAATCCTTACATCTCCTACTACTGGTGGGGTGACAGCTAGTTTTGGTATCTTGGGGGATATCATTATTGCCGAACCCAATGCCTACATCGCATTTGCGGGTAAAAGAGTAGTTTCTTGAACATTGATTGAATACGACAGTCCGGAGGGTTCCTAGGTGGCTGACGTTCGATAAGGGCTTATTCGATCTAAACCACGTAATCCTTTAAAAGGTGTTTGAGTGAGTTATTTCAGCTCCACGCTTTCGTTTCCTCGAATCAAAATTCAATCAAGTCAAACCTTACTTAAAACTCTTCCAAAATTCATTCTCAGTATTTGTAACGAACAAGTAGTTATTTAGTTTATAAGAATCAAAGTCAAAATTCGCAGAATGGATTTTTCTTTGGTAACATAAGATGAAATTGTAGAAAGAATCATGCGGAGAAATGGGTTTGACCGATATTCCTGATTAGTAATTAGGAAGTCCCTATTAAATAAAAGAGCAAATTCTTTCTTCCGCTAAATTAGGCGCGAATAAAATGAATGAATTTCATGCTCCCTTCTTACATTACTCTTCTTACATTACATGTGGATATATAATCCAACTATAGCAAATAGCGGGATAGAGTCTTGCATCTTTCTACATCTCTAGAGGATCTCTAGTTTGACTACGATTCCCTGTTGTTGGATCGGATTATAACGAACTTTTGGGTAGCAAGTAGATATTACTTAGTGGAATTCTATATGAATTAGTATAATTATCAGATAGCTTTAATAAAAAGAAATAAATAACAGGTAAATTAATATAACAAGAAATAACAGGTCAAAATATTAAGTCGAGGTATCCATTCTATGACAAACTTACCCTCTCTCTACTTTTGTGCCTTTAGTAGGCCTAGTATTTCCGGCCATTGCAATGGCTTCTTTATCTCTTCATGTTAAAAAAAACAAGATTATTTATGCTACACGTCTATTTGTTTTTTTCAAAACTTAGACTTTGACGATAACACAACTATCTATTTAGTAGACGGCAGTCTAACATGTGGCTGACTCCAAACATAAGCGATTATACATGCGTAAACATGATATATGAGGAAATGAATTAGAAAGTCTTTGAAAATCTCCAATATATAACAGATCGGGCGACGAATGGTTGAGATGTCAAATCAATATATCTATATGGATGTAGGTATCCATAGGGAATCATATAAAGGTGATGTTATTATTTGAGATCTAAATAATTCGATGAGTTACTCCGTCAGTCAAGGTTCACATCAAAATAGTGCTAGTTGATTAGAATTACTTTGGAAACAAAAAAAGTCAAATATCCGAGTTATTCTATCAATTCCAATAAAATGCAACGAGATCTAGTATGAGTTGGCGATCAGAACGTATATGGATAGAATTTATAAGAAAGAGGATCTCAAAAGCAATTTCCGCTAGGCCTTTATCTATCCCCTTTTTTTAGGTTCATTAGGGTGTTGGTTGGAACTTCGAGTTATCTTGCTTGGTAGGGATTTGATATCTTGATTTCCATCTCAGCAAAGAATTTCTTTGTTTTCCACAGGGGATCGTAATGTCTTTCTATGGGATTGCAAGTCTCTTTAAGGTCTCTTTATTAGCTCCTATTTGTGGTGCACCATTTTGTGGAATGTAGGTAGCGGTTATGATCGATTGGATAGAAAAGAAGGAATAGTGTCTATTTTGGGACAAAATTCTAGAATCTTCCTACAATTCCTTATGAAAGACATTCAGTCCATCAGAATAGAAGTGAAAGAGGGTATTTATGCACGTCGTGTCCTTTATATGGAAATCAGAGGCCAAGGGGCCCTTGACTCGTACCGATCAGAATCTGACCCACCCCACGAGAGAGAAATTCGAAATTGAGAAAAAGGCTCCCGAATTGGCTGGCCTATTTCTTGCGTGTACCAATTGAAGTTTCCTTGAGAAAGTTCAGAATGAATGCTTTCTTAGTTTGTAGCAAGAGGGATAAAACGGAAAAGAAAGAATAGTCTTTTTTATAGACTCTAGTATAACTTAACGGGAATTTCTGAAGAATTCTCATTCATTTGAGCCAAAGCAGACGTATAGGGAACATATGGAAAACTGTCTTTCTTTGTCCGAAATTATGATGCGTATGTAACTCCACAGTAACAAAAGTGGATTCTTTGATATTTGCTTTCTGTATTATTTCGAAATTCAAGGATTAACTAATGAACAGGGAATGGATTCATAATAGTATCCATATAACTTTACATAGAACTTATGTTTGATATAAATATTAGTAGTGTAGAGAGGTAACGAATGAAGTGAGTTCATTAACAAATCAAAGACGAATGACAAACAAGAAAGCATTCATTCCCCTTCTATATCTTGCATCTATAGTCTTTTTTCCCTCGTGGATCTCTATTTAATAAAAGCCTAGAATCTTGGGTTACTCATTGGTGGAATACTGGTCAATCCGAAATGTTGTAGAATTAGATTAAAGAAAAGATTATTATAACAAAAGTGAGAGAATTAGAGGAACTCTTTCCCTTGGATGAAATGTTAAAGGAATACCGAGAAAGACATCTATCTACAAAAGCTTCGTATCGGAATCTACAAAGAAAGGAAAGGATCCATCCAATTGATCAAGATGCACAATGAATGAGGATCGTATCCATACGATTTTGCACTTCTCGACAAATAGAATCCGTTTCATTATTCTAAGTGGTTATTTTCTATTCTTGGTAATTAAGAACTTGTTATTCTTCACTCTTGGGTTCACGAGTTCCTATATAATTTAAGCGACACAATCAAAGTTTTTTCTATTCTTTTATTAACTGATTTATGTATAGGTATAGGATTCCATTCGCCCCATGGTTGGGAACTAATGATTGGTTCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTCTATCCGGTCTTGTTTCCACTTTGCCGGTCATTCCGGACACAGCAAATATTGGATCGTTATTTAAATCGTCTATCTCCGTCACTTGTAGTGATTGATCATTCAATGAATGACTGCAAGATCGAATCTTTGTTACTTTGTACATAAGTCAAACATTCTAAATTCTACTTATTCCTTATACCCATCCAGAAGGATGCCTCCTATATTCAAGTCAGATTATTATTTCAGTATATAGGGACCTACCTAATTTGATTAATGATTGGACCATGCAAACTAGAAATACCTTTTCTTCGATAAAGGACGAGATTACTCGATCTATTTCCGTATCACTCATGCATGATATATATAATATCTTGGGCACTCGTTTCAAATGCATATCCCATTTTTAGCAGGGTTATGAATGAAAATTCACAAGAAGCAACCAACCGGCCGTATTGTCTGCGCCAACTGCCATTTAGCTAATAAGCCCGTGTCGAGGTTCCACAAGCGGTACTTCCTGATACTGTATTTGAAGCAGTTGTTCGAATTTCTTATGATATGCAACTGAAACAAGTTCTTGCGAATGGGAAAAGGGTTTGAATGTGTCGGTTGTTCTTATTTTACCCGAAGGGTTTGAATTAGCCCCCCGATCGTATTTCTCCCGAGATTAAAGAAAAGATGGGCAATCCTTTTAGAGCTATCGTCCCACTAAATAAAAGATTCTTGTGATAGGGCCCGTTCCTGGTCAGAAATATAGTGAAATAACCTTTCCTATTCTTTCCCCAGACCTTGCGACTAAGAAATATGTTCACTTCTGAAAATATCCCATATACGGAGGCGGGAACAGTGGAAGGGGTCAGATTTACCCGGGAGTCAGAGTCATAATAATGTTGATAATGCTACACAGGTATAGTAAGAAAAATAATACGAAAAGAAAAGGGAGGATATGAAATAACCATAGTGGATGCATCGAATGAGCGGCAAGTGGTTGATATTATCCCTCTAGGACTAGAACTTCTTGTTTCAGAGGGCGGGCGAATCTATCAAAATCAATCAACCATTAACGAGTAATCCTACTAATGTGGGAGGATTTGGTCAGGGAGATGCGGAAATAGTCCTTCAAGATCCATTACGTGTCCAAGGCCTTTTGTTCTTTTATCTGTTATAA

mRNA sequence

ATGAATCAAAACATTCCTAGTCATAGTGACAATTCTAGTTACAGTACCGTTGATGATTTAGTCGGCCGACATTCGGTCGGATCTGATGACACTTTTTTAATTAGGGATAGTAATAGCAGCAGTCATTCCATTTGGATAGTGAAAGAGAGAGAGACTATGATCGTTACATGGATGATACTATATATATATATAAGTGACAGTTACGTTTATAGTGACATTTGTGGCTCAGGTGCAAATAGTAGTGAAAGTGAGAGTTCCAATATAAGAACTAGCACGGATGGAAGTGATTTAACTAGAATGGAGAGTTCTACGGAAAGTGATACGTCAAGTTCTACGGAAAGTTCTAATGATCTAGATGGAACTCAAACAAGCATTTGTGGGTTCAATGCGCAAATTTGTGTGCTTCTGGAGGAGCACGCATGCAAGAAGGAAGGAAGTGTGAGCTTGATGCAAATGTCAAAAAGATCTGCTTTATATGATTATCAATCAAATAAAAGATTCTTCTATGTAGCAATCCTTACATCTCCTACTACTGGTGGGGTGACAGCTAGTTTTGGTATCTTGGGGGATATCATTATTGCCGAACCCAATGCCTACATCGCATTTGCGGGTATAGGATTCCATTCGCCCCATGGTTGGGAACTAATGATTGGTTCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTCTATCCGGTCTTGTTTCCACTTTGCCGGTCATTCCGGACACAGCAAATATTGGATCGTTATTTAAATCGTCTATCTCCGTCACTTGTATAAGAAAAATAATACGAAAAGAAAAGGGAGGATATGAAATAACCATAGTGGATGCATCGAATGAGCGGCAAGTGGTTGATATTATCCCTCTAGGACTAGAACTTCTTAGGGCGGGCGAATCTATCAAAATCAATCAACCATTAACGAGTAATCCTACTAATGTGGGAGGATTTGGTCAGGGAGATGCGGAAATAGTCCTTCAAGATCCATTACGTGTCCAAGGCCTTTTGTTCTTTTATCTGTTATAA

Coding sequence (CDS)

ATGAATCAAAACATTCCTAGTCATAGTGACAATTCTAGTTACAGTACCGTTGATGATTTAGTCGGCCGACATTCGGTCGGATCTGATGACACTTTTTTAATTAGGGATAGTAATAGCAGCAGTCATTCCATTTGGATAGTGAAAGAGAGAGAGACTATGATCGTTACATGGATGATACTATATATATATATAAGTGACAGTTACGTTTATAGTGACATTTGTGGCTCAGGTGCAAATAGTAGTGAAAGTGAGAGTTCCAATATAAGAACTAGCACGGATGGAAGTGATTTAACTAGAATGGAGAGTTCTACGGAAAGTGATACGTCAAGTTCTACGGAAAGTTCTAATGATCTAGATGGAACTCAAACAAGCATTTGTGGGTTCAATGCGCAAATTTGTGTGCTTCTGGAGGAGCACGCATGCAAGAAGGAAGGAAGTGTGAGCTTGATGCAAATGTCAAAAAGATCTGCTTTATATGATTATCAATCAAATAAAAGATTCTTCTATGTAGCAATCCTTACATCTCCTACTACTGGTGGGGTGACAGCTAGTTTTGGTATCTTGGGGGATATCATTATTGCCGAACCCAATGCCTACATCGCATTTGCGGGTATAGGATTCCATTCGCCCCATGGTTGGGAACTAATGATTGGTTCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTCTATCCGGTCTTGTTTCCACTTTGCCGGTCATTCCGGACACAGCAAATATTGGATCGTTATTTAAATCGTCTATCTCCGTCACTTGTATAAGAAAAATAATACGAAAAGAAAAGGGAGGATATGAAATAACCATAGTGGATGCATCGAATGAGCGGCAAGTGGTTGATATTATCCCTCTAGGACTAGAACTTCTTAGGGCGGGCGAATCTATCAAAATCAATCAACCATTAACGAGTAATCCTACTAATGTGGGAGGATTTGGTCAGGGAGATGCGGAAATAGTCCTTCAAGATCCATTACGTGTCCAAGGCCTTTTGTTCTTTTATCTGTTATAA

Protein sequence

MNQNIPSHSDNSSYSTVDDLVGRHSVGSDDTFLIRDSNSSSHSIWIVKERETMIVTWMILYIYISDSYVYSDICGSGANSSESESSNIRTSTDGSDLTRMESSTESDTSSSTESSNDLDGTQTSICGFNAQICVLLEEHACKKEGSVSLMQMSKRSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIAFAGIGFHSPHGWELMIGSVYKDFGFSHNDQILSGLVSTLPVIPDTANIGSLFKSSISVTCIRKIIRKEKGGYEITIVDASNERQVVDIIPLGLELLRAGESIKINQPLTSNPTNVGGFGQGDAEIVLQDPLRVQGLLFFYLL

Homology

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BLAST of CmaCh11G012060 vs. ExPASy Swiss-Prot
Match: A4QLK7 (Cytochrome f OS=Lobularia maritima OX=226051 GN=petA PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 6.3e-31
Identity = 72/100 (72.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 242 VIPDTANIGSLFKSSISVTCIRKIIRKEKGGYEITIVDASNERQVVDIIPLGLELL-RAG 301
           + PD +   +   ++ +   I KI+RKEKGGYEITIVDASNERQV+DIIP GLELL   G
Sbjct: 194 IYPDGSKSNNTVYNATAGGIINKILRKEKGGYEITIVDASNERQVIDIIPRGLELLVSEG 253

Query: 302 ESIKINQPLTSNPTNVGGFGQGDAEIVLQDPLRVQGLLFF 341
           ESIK++QPLTSNP NVGGFGQGDAEIVLQDPLRVQGLLFF
Sbjct: 254 ESIKLDQPLTSNP-NVGGFGQGDAEIVLQDPLRVQGLLFF 292

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BLAST of CmaCh11G012060 vs. ExPASy Swiss-Prot
Match: A4QK31 (Cytochrome f OS=Arabis hirsuta OX=78191 GN=petA PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 8.2e-31
Identity = 72/100 (72.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 242 VIPDTANIGSLFKSSISVTCIRKIIRKEKGGYEITIVDASNERQVVDIIPLGLELL-RAG 301
           + PD +   +   ++ +   I KI+RKEKGGYEITIVDASNERQV+DIIP GLELL   G
Sbjct: 194 IYPDGSKSNNTVYNATAGGIISKILRKEKGGYEITIVDASNERQVIDIIPRGLELLVSEG 253

Query: 302 ESIKINQPLTSNPTNVGGFGQGDAEIVLQDPLRVQGLLFF 341
           ESIK++QPLTSNP NVGGFGQGDAEIVLQDPLRVQGLLFF
Sbjct: 254 ESIKLDQPLTSNP-NVGGFGQGDAEIVLQDPLRVQGLLFF 292

[Close]

BLAST of CmaCh11G012060 vs. ExPASy Swiss-Prot
Match: P36438 (Cytochrome f OS=Brassica rapa subsp. rapa OX=51350 GN=petA PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 8.2e-31
Identity = 72/100 (72.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 242 VIPDTANIGSLFKSSISVTCIRKIIRKEKGGYEITIVDASNERQVVDIIPLGLELL-RAG 301
           + PD +   +   ++ +   I KI+RKEKGGYEITIVDASNERQV+DIIP GLELL   G
Sbjct: 194 IYPDGSKSNNTVYNATAGGIISKILRKEKGGYEITIVDASNERQVIDIIPRGLELLVSEG 253

Query: 302 ESIKINQPLTSNPTNVGGFGQGDAEIVLQDPLRVQGLLFF 341
           ESIK++QPLTSNP NVGGFGQGDAEIVLQDPLRVQGLLFF
Sbjct: 254 ESIKLDQPLTSNP-NVGGFGQGDAEIVLQDPLRVQGLLFF 292

[Close]

BLAST of CmaCh11G012060 vs. ExPASy Swiss-Prot
Match: A4QLB9 (Cytochrome f OS=Lepidium virginicum OX=59292 GN=petA PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 8.2e-31
Identity = 72/100 (72.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 242 VIPDTANIGSLFKSSISVTCIRKIIRKEKGGYEITIVDASNERQVVDIIPLGLELL-RAG 301
           + PD +   +   ++ +   I KI+RKEKGGYEITIVDASNERQV+DIIP GLELL   G
Sbjct: 194 IYPDGSKSNNTVYNATAGGIISKILRKEKGGYEITIVDASNERQVIDIIPRGLELLVSEG 253

Query: 302 ESIKINQPLTSNPTNVGGFGQGDAEIVLQDPLRVQGLLFF 341
           ESIK++QPLTSNP NVGGFGQGDAEIVLQDPLRVQGLLFF
Sbjct: 254 ESIKLDQPLTSNP-NVGGFGQGDAEIVLQDPLRVQGLLFF 292

[Close]

BLAST of CmaCh11G012060 vs. ExPASy Swiss-Prot
Match: A4QLU6 (Cytochrome f OS=Nasturtium officinale OX=65948 GN=petA PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 8.2e-31
Identity = 72/100 (72.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 242 VIPDTANIGSLFKSSISVTCIRKIIRKEKGGYEITIVDASNERQVVDIIPLGLELL-RAG 301
           + PD +   +   ++ +   I KI+RKEKGGYEITIVDASNERQV+DIIP GLELL   G
Sbjct: 194 IYPDGSKSNNTVYNATAGGIISKILRKEKGGYEITIVDASNERQVIDIIPRGLELLVSEG 253

Query: 302 ESIKINQPLTSNPTNVGGFGQGDAEIVLQDPLRVQGLLFF 341
           ESIK++QPLTSNP NVGGFGQGDAEIVLQDPLRVQGLLFF
Sbjct: 254 ESIKLDQPLTSNP-NVGGFGQGDAEIVLQDPLRVQGLLFF 292

[Close]

BLAST of CmaCh11G012060 vs. ExPASy TrEMBL
Match: A0A803L3N7 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 8.8e-52
Identity = 129/224 (57.59%), Postives = 152/224 (67.86%), Query Frame = 0


Query: 132 ICVLLEEHACKKEGSVSLMQMSK-RSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGD 191
           I V     A  +EGS+SLMQM+K  S LYDYQSNK+ FYV+ILTSPTTGGVTASFG+LGD
Sbjct: 104 IIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNKKLFYVSILTSPTTGGVTASFGMLGD 163

Query: 192 IIIAEPNAYIAFAGIG-FHSPHGWELMIGSVYKDFGFSHN-----------DQILSGLVS 251
           IIIAEPNAYIAFAG           +  GS   +F F                +LSG   
Sbjct: 164 IIIAEPNAYIAFAGKRVIEQTLNKTVPEGSQAAEFLFHKGLFDPIVPRNLLKGVLSGNRG 223

Query: 252 TLPVIPDTANIGSLFKSSISVTCIRKIIRKEKGGYEITIVDASNERQVVDIIPLGLELL- 311
              + PD +   +   ++ +   ++KI+RKEKGGYEI I DAS+ R+VVDIIP G ELL 
Sbjct: 224 RGQIYPDGSKSNNTVYNATTAGIVKKIVRKEKGGYEINIADASDGREVVDIIPPGPELLV 283

Query: 312 RAGESIKINQPLTSNPTNVGGFGQGDAEIVLQDPLRVQGLLFFY 342
             GESIK++QPLTSNP NVGGFGQGDAEIVLQDPLRVQGLLFF+
Sbjct: 284 SEGESIKLDQPLTSNP-NVGGFGQGDAEIVLQDPLRVQGLLFFF 326

[Close]

BLAST of CmaCh11G012060 vs. ExPASy TrEMBL
Match: A0A4D8Y7M7 (Cytochrome f OS=Salvia splendens OX=180675 GN=accD PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.3e-50
Identity = 148/329 (44.98%), Postives = 166/329 (50.46%), Query Frame = 0


Query: 128 FNAQICVLLEEHACKKEGSVSLMQMSK-RSALYDYQSNKRFFYVAILTSPTTGGVTASFG 187
           F   I V     A  +EGS+SLMQM+K  SALYDYQSNK+  YV+ILTSPTTGGVTASFG
Sbjct: 100 FRPLILVCASGGARMQEGSLSLMQMAKISSALYDYQSNKKLLYVSILTSPTTGGVTASFG 159

Query: 188 ----------------ILGDIIIAEPNAYIAFAGIGFHSPHGWELMIGSVYKDFGFSHND 247
                            L D + A     +    IGFHSPHGWELMIGSVYKDFGF HND
Sbjct: 160 NEELIILNSWAQEFLYNLSDTVKAFSILLLTDLCIGFHSPHGWELMIGSVYKDFGFGHND 219

Query: 248 QILSGLVSTLP-------------------------------VIPDTA------------ 307
           QI+SGLVST P                               V+PDT             
Sbjct: 220 QIISGLVSTFPGYENPREATGRIVCANCHLANKPVDIEVPQTVLPDTVFEAVVRIPYDKQ 279

Query: 308 -------------NIGSLF------------------------------------KSSIS 341
                        N+G++                                     KS+ +
Sbjct: 280 VKQVLANGKKGGLNVGAVLILPEGFELAPSDRISPEMKEKIGGNRGRGQIYPDGSKSNNT 339

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BLAST of CmaCh11G012060 vs. ExPASy TrEMBL
Match: A0A2G2XVS7 (Cytochrome f OS=Capsicum annuum OX=4072 GN=T459_34525 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.2e-48
Identity = 125/210 (59.52%), Postives = 148/210 (70.48%), Query Frame = 0


Query: 140 ACKKEGSVSLMQMSK-RSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNA 199
           AC+KE  +SLMQM+K  SALYDYQ NK+ FYV+ILTSPTTGGVTASFG+LGDIIIAEPNA
Sbjct: 113 ACRKE-VLSLMQMAKISSALYDYQLNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNA 172

Query: 200 YIAFAG---IGFHSPHGW--ELMIGSVYKDFGFSHNDQILS--GLVSTLPVIPDTANIGS 259
           Y  FA    +    P     + +  +V +        Q+L+  G      + PD +N  +
Sbjct: 173 YNTFAANKPVEIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGGNRGRGQIYPDGSNSNN 232

Query: 260 LFKSSISVTCIRKIIRKEKGGYEITIVDASNERQVVDIIPLGLELL-RAGESIKINQPLT 319
              ++ +   + KIIRKEKGGYEITI+DAS  R+VVDIIP GLELL   GESIK +QPLT
Sbjct: 233 TVYNATTAGIVSKIIRKEKGGYEITIMDASKGRRVVDIIPPGLELLVSEGESIKFDQPLT 292

Query: 320 SNPTNVGGFGQGDAEIVLQDPLRVQGLLFF 341
           SNP NVGGFGQGDAEIVLQDPL VQGLLFF
Sbjct: 293 SNP-NVGGFGQGDAEIVLQDPLHVQGLLFF 320

[Close]

BLAST of CmaCh11G012060 vs. ExPASy TrEMBL
Match: A0A4S4DD60 (Photosystem I assembly protein Ycf4 OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_001459 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.2e-47
Identity = 131/262 (50.00%), Postives = 157/262 (59.92%), Query Frame = 0


Query: 132 ICVLLEEHACKKEGSVSLMQMSK-RSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGD 191
           I V     A  +EGS+SLMQM+K  SA Y+YQSNK+ FYV+ILTSPTTGGVTASFG+LGD
Sbjct: 86  IIVCASGGARMQEGSLSLMQMAKISSASYNYQSNKKLFYVSILTSPTTGGVTASFGMLGD 145

Query: 192 IIIAEPNAYIAFAGIG---FHSPHG------WELM--------------IGSVYKDFGFS 251
           +IIAEPNAYIAFAG G   F    G      W                 I S+  + G+ 
Sbjct: 146 VIIAEPNAYIAFAGSGYDLFDRKEGIMCIFRWGFPGINRRIFLRFFMKDIQSIRMEKGYE 205

Query: 252 HNDQILSGLVST--------------LPVIPDTA--------------NIGSLFKSSISV 311
           +  +    +V                  ++PDT                + +   ++ S 
Sbjct: 206 NPREATGRIVCANCHLANKPVDIEVPQAILPDTVFEAVVRIPYDMQLKQVLANVYNATSA 265

Query: 312 TCIRKIIRKEKGGYEITIVDASNERQVVDIIPLGLELL-RAGESIKINQPLTSNPTNVGG 341
             + +I+RKEKGGYEITIVDAS+  QVVDIIP G ELL   GESIK++QPLTSNP NVGG
Sbjct: 266 GIVSRIVRKEKGGYEITIVDASDGHQVVDIIPPGPELLVSEGESIKLDQPLTSNP-NVGG 325

[Close]

BLAST of CmaCh11G012060 vs. ExPASy TrEMBL
Match: A0A4D8YSA8 (Cytochrome f OS=Salvia splendens OX=180675 GN=Saspl_049914 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.4e-44
Identity = 148/382 (38.74%), Postives = 166/382 (43.46%), Query Frame = 0


Query: 128 FNAQICVLLEEHACKKEGSVSLMQMSK-RSALYDYQSNKRFFYVAILTSPTTGGVTASFG 187
           F   I V     A  +EGS+SLMQM+K  SALYDYQSNK+  YV+ILTSPTTGGVTA FG
Sbjct: 112 FRPLIIVCASGGARMQEGSLSLMQMAKISSALYDYQSNKKLLYVSILTSPTTGGVTARFG 171

Query: 188 ----------------ILGDIIIAEPNAYIAFAGIGFHSPHGWELMIGSVYKDFGFSHND 247
                            L D + A     +    IGFHSPHGWELMIGSVYKDFGF HND
Sbjct: 172 NEELIILNSWAQEFLYNLSDTVKAFSILLLTDLCIGFHSPHGWELMIGSVYKDFGFGHND 231

Query: 248 QILSGLVSTLP-------------------------------VIPDTA------------ 307
           QI+SGLVST P                               V+PDT             
Sbjct: 232 QIISGLVSTFPGYENPREATGRIVCANCHLANKPVDIEVPQTVLPDTVFEAVVRIPYDKQ 291

Query: 308 -------------NIGSLF---------------------------------KSSISVT- 341
                        N+G++                                  K +I V  
Sbjct: 292 VKQVLANGKKGGLNVGAVLILPEGFELAPSDRISPEMKEKVGNLSFQSYRPNKKNILVIG 351

[Close]

BLAST of CmaCh11G012060 vs. NCBI nr
Match: PHT61618.1 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [Capsicum annuum])

HSP 1 Score: 203.8 bits (517), Expect = 2.5e-48
Identity = 125/210 (59.52%), Postives = 148/210 (70.48%), Query Frame = 0


Query: 140 ACKKEGSVSLMQMSK-RSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNA 199
           AC+KE  +SLMQM+K  SALYDYQ NK+ FYV+ILTSPTTGGVTASFG+LGDIIIAEPNA
Sbjct: 113 ACRKE-VLSLMQMAKISSALYDYQLNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNA 172

Query: 200 YIAFAG---IGFHSPHGW--ELMIGSVYKDFGFSHNDQILS--GLVSTLPVIPDTANIGS 259
           Y  FA    +    P     + +  +V +        Q+L+  G      + PD +N  +
Sbjct: 173 YNTFAANKPVEIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGGNRGRGQIYPDGSNSNN 232

Query: 260 LFKSSISVTCIRKIIRKEKGGYEITIVDASNERQVVDIIPLGLELL-RAGESIKINQPLT 319
              ++ +   + KIIRKEKGGYEITI+DAS  R+VVDIIP GLELL   GESIK +QPLT
Sbjct: 233 TVYNATTAGIVSKIIRKEKGGYEITIMDASKGRRVVDIIPPGLELLVSEGESIKFDQPLT 292

Query: 320 SNPTNVGGFGQGDAEIVLQDPLRVQGLLFF 341
           SNP NVGGFGQGDAEIVLQDPL VQGLLFF
Sbjct: 293 SNP-NVGGFGQGDAEIVLQDPLHVQGLLFF 320

[Close]

BLAST of CmaCh11G012060 vs. NCBI nr
Match: THG00580.1 (hypothetical protein TEA_001459 [Camellia sinensis var. sinensis])

HSP 1 Score: 199.5 bits (506), Expect = 4.6e-47
Identity = 131/262 (50.00%), Postives = 157/262 (59.92%), Query Frame = 0


Query: 132 ICVLLEEHACKKEGSVSLMQMSK-RSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGD 191
           I V     A  +EGS+SLMQM+K  SA Y+YQSNK+ FYV+ILTSPTTGGVTASFG+LGD
Sbjct: 86  IIVCASGGARMQEGSLSLMQMAKISSASYNYQSNKKLFYVSILTSPTTGGVTASFGMLGD 145

Query: 192 IIIAEPNAYIAFAGIG---FHSPHG------WELM--------------IGSVYKDFGFS 251
           +IIAEPNAYIAFAG G   F    G      W                 I S+  + G+ 
Sbjct: 146 VIIAEPNAYIAFAGSGYDLFDRKEGIMCIFRWGFPGINRRIFLRFFMKDIQSIRMEKGYE 205

Query: 252 HNDQILSGLVST--------------LPVIPDTA--------------NIGSLFKSSISV 311
           +  +    +V                  ++PDT                + +   ++ S 
Sbjct: 206 NPREATGRIVCANCHLANKPVDIEVPQAILPDTVFEAVVRIPYDMQLKQVLANVYNATSA 265

Query: 312 TCIRKIIRKEKGGYEITIVDASNERQVVDIIPLGLELL-RAGESIKINQPLTSNPTNVGG 341
             + +I+RKEKGGYEITIVDAS+  QVVDIIP G ELL   GESIK++QPLTSNP NVGG
Sbjct: 266 GIVSRIVRKEKGGYEITIVDASDGHQVVDIIPPGPELLVSEGESIKLDQPLTSNP-NVGG 325

[Close]

BLAST of CmaCh11G012060 vs. NCBI nr
Match: KAF3672668.1 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [Capsicum annuum])

HSP 1 Score: 183.7 bits (465), Expect = 2.6e-42
Identity = 115/200 (57.50%), Postives = 131/200 (65.50%), Query Frame = 0


Query: 143 KEGSVSLMQMSK-RSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 202
           +EGS+SLMQM+K  SALYDYQ NK+ FYV+ILTSP TGGVTA+FG+LGDIIIAEPNAYIA
Sbjct: 127 QEGSLSLMQMAKILSALYDYQLNKKLFYVSILTSPKTGGVTANFGMLGDIIIAEPNAYIA 186

Query: 203 FAGIGFHSPHGWELMIGSVYKDFGFSHNDQILSGLVSTLPVIPDTANIGSLFKSSISVTC 262
           FA I                     S   ++  G+ +   +  D    G   ++  +   
Sbjct: 187 FADIQ--------------------SVRIEVKEGIYARRVLYMDIRGQGYSKQNRTN--- 246

Query: 263 IRKIIRKEKGGYEITIVDASNERQVVDIIPLGLELL-RAGESIKINQPLTSNPTNVGGFG 322
                  +KGGYEITI DAS  RQVVDIIP   ELL   GESIK  QPLTSNP NVGGFG
Sbjct: 247 -------KKGGYEITITDASERRQVVDIIPPRPELLVFEGESIKFYQPLTSNP-NVGGFG 295

Query: 323 QGDAEIVLQDPLRVQGLLFF 341
           QGDAEIVLQDPLRVQGLLFF
Sbjct: 307 QGDAEIVLQDPLRVQGLLFF 295

[Close]

BLAST of CmaCh11G012060 vs. NCBI nr
Match: XP_020520945.1 (uncharacterized protein LOC110006972 [Amborella trichopoda])

HSP 1 Score: 183.0 bits (463), Expect = 4.5e-42
Identity = 138/327 (42.20%), Postives = 159/327 (48.62%), Query Frame = 0


Query: 132 ICVLLEEHACKKEGSVSLMQMSK-RSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGD 191
           I V     A  +EGS+SLMQM+K  SALYDYQSNK+ FYVAILTSPTTGGVTASFG+LGD
Sbjct: 104 ILVCASGGARMQEGSLSLMQMAKISSALYDYQSNKKLFYVAILTSPTTGGVTASFGMLGD 163

Query: 192 IIIAEPNAYIAFAG-IGFHS---------------------------------------- 251
           IIIAEPNAYIAFAG  G+ +                                        
Sbjct: 164 IIIAEPNAYIAFAGKRGYENPREATGRIVCANCHLANKPVDIEVPQAVLPDTVFEAVVRI 223

Query: 252 --------------------------PHGWE----------------------------- 311
                                     P G+E                             
Sbjct: 224 PYDLQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPEIKEKMGNLSFQSYRPTKKN 283

Query: 312 -LMIGSV-------------------YKDFGFSHNDQILSGLVSTLPVIPDTANIGSLFK 341
            L+IG V                    KD  F      + G      + PD +   +   
Sbjct: 284 ILVIGPVPGQKYSEITFPILSPDPTTKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVY 343

[Close]

BLAST of CmaCh11G012060 vs. NCBI nr
Match: MBC9853675.1 (hypothetical protein [Adiantum capillus-veneris])

HSP 1 Score: 172.9 bits (437), Expect = 4.6e-39
Identity = 141/368 (38.32%), Postives = 162/368 (44.02%), Query Frame = 0


Query: 132 ICVLLEEHACKKEGSVSLMQMSK-RSALYD--YQSNKRFFYVAILTSPTTGGVTASFGIL 191
           I V     A  +EGS+SLMQM+K  SALYD  YQSNK+ FYVAILTSPTTGGVTASF +L
Sbjct: 146 ILVCASGGARMQEGSLSLMQMAKISSALYDYKYQSNKKLFYVAILTSPTTGGVTASFAML 205

Query: 192 GDIIIAEPNAYIAFAG---------------------------------------IGFHS 251
           GDIIIAEPNAYIAFAG                                       +G+ +
Sbjct: 206 GDIIIAEPNAYIAFAGKRIIEETLKMEVPEGSQKTEPLFEKGLLDLIVPRNPLKDVGYEN 265

Query: 252 ------------------------------------------------------------ 311
                                                                       
Sbjct: 266 PREATGRIVCANCHLANKPVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKRGGLNV 325

Query: 312 ------PHGWE------------------------------LMIGSV------------- 342
                 P G+E                              L+IG V             
Sbjct: 326 GAVLILPEGFELAPPDRISPEIKEKMGNLSFQSYRPTKKNILVIGPVPGQKYSEITFPIL 385

[Close]

BLAST of CmaCh11G012060 vs. TAIR 10
Match: ATCG00540.1 (photosynthetic electron transfer A )

HSP 1 Score: 132.1 bits (331), Expect = 8.5e-31
Identity = 70/100 (70.00%), Postives = 81/100 (81.00%), Query Frame = 0


Query: 242 VIPDTANIGSLFKSSISVTCIRKIIRKEKGGYEITIVDASNERQVVDIIPLGLELL-RAG 301
           + PD +   +   ++ +   I KI+RKEKGGYEITIVDASN R+V+DIIP GLELL   G
Sbjct: 194 IYPDGSKSNNTVYNATAGGIISKILRKEKGGYEITIVDASNGREVIDIIPRGLELLVSEG 253

Query: 302 ESIKINQPLTSNPTNVGGFGQGDAEIVLQDPLRVQGLLFF 341
           ESIK++QPLTSNP NVGGFGQGDAEIVLQDPLRVQGLLFF
Sbjct: 254 ESIKLDQPLTSNP-NVGGFGQGDAEIVLQDPLRVQGLLFF 292

[Close]

BLAST of CmaCh11G012060 vs. TAIR 10
Match: ATCG00500.1 (acetyl-CoA carboxylase carboxyl transferase subunit beta )

HSP 1 Score: 95.5 bits (236), Expect = 8.8e-20
Identity = 49/63 (77.78%), Postives = 57/63 (90.48%), Query Frame = 0


Query: 143 KEGSVSLMQMSK-RSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 202
           +EGS+SLMQM+K  S L DYQS+K+ FY++ILTSPTTGGVTASFG+LGDIIIAEP AYIA
Sbjct: 370 QEGSLSLMQMAKISSVLCDYQSSKKLFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIA 429

Query: 203 FAG 205
           FAG
Sbjct: 430 FAG 432

[Close]

BLAST of CmaCh11G012060 vs. TAIR 10
Match: ATCG00530.1 (CemA-like proton extrusion protein-related )

HSP 1 Score: 79.0 bits (193), Expect = 8.5e-15
Identity = 35/42 (83.33%), Postives = 38/42 (90.48%), Query Frame = 0


Query: 205 IGFHSPHGWELMIGSVYKDFGFSHNDQILSGLVSTLPVIPDT 247
           IGFHSPHGWELMIG +YKDFGF+H +QILSGLVST PVI DT
Sbjct: 162 IGFHSPHGWELMIGYIYKDFGFAHYEQILSGLVSTFPVILDT 203

The following BLAST results are available for this feature:

BLAST of CmaCh11G012060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4QLK7	6.3e-31	72.00	Cytochrome f OS=Lobularia maritima OX=226051 GN=petA PE=3 SV=1	[more]
A4QK31	8.2e-31	72.00	Cytochrome f OS=Arabis hirsuta OX=78191 GN=petA PE=3 SV=1	[more]
P36438	8.2e-31	72.00	Cytochrome f OS=Brassica rapa subsp. rapa OX=51350 GN=petA PE=1 SV=1	[more]
A4QLB9	8.2e-31	72.00	Cytochrome f OS=Lepidium virginicum OX=59292 GN=petA PE=3 SV=1	[more]
A4QLU6	8.2e-31	72.00	Cytochrome f OS=Nasturtium officinale OX=65948 GN=petA PE=3 SV=1	[more]

BLAST of CmaCh11G012060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A803L3N7	8.8e-52	57.59	Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1	[more]
A0A4D8Y7M7	1.3e-50	44.98	Cytochrome f OS=Salvia splendens OX=180675 GN=accD PE=3 SV=1	[more]
A0A2G2XVS7	1.2e-48	59.52	Cytochrome f OS=Capsicum annuum OX=4072 GN=T459_34525 PE=3 SV=1	[more]
A0A4S4DD60	2.2e-47	50.00	Photosystem I assembly protein Ycf4 OS=Camellia sinensis var. sinensis OX=542762...	[more]
A0A4D8YSA8	1.4e-44	38.74	Cytochrome f OS=Salvia splendens OX=180675 GN=Saspl_049914 PE=3 SV=1	[more]

BLAST of CmaCh11G012060 vs. NCBI nr


Match Name	E-value	Identity	Description
PHT61618.1	2.5e-48	59.52	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [...	[more]
THG00580.1	4.6e-47	50.00	hypothetical protein TEA_001459 [Camellia sinensis var. sinensis]	[more]
KAF3672668.1	2.6e-42	57.50	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [...	[more]
XP_020520945.1	4.5e-42	42.20	uncharacterized protein LOC110006972 [Amborella trichopoda]	[more]
MBC9853675.1	4.6e-39	38.32	hypothetical protein [Adiantum capillus-veneris]	[more]

BLAST of CmaCh11G012060 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00540.1	8.5e-31	70.00	photosynthetic electron transfer A	[more]
ATCG00500.1	8.8e-20	77.78	acetyl-CoA carboxylase carboxyl transferase subunit beta	[more]
ATCG00530.1	8.5e-15	83.33	CemA-like proton extrusion protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002325	Cytochrome f	PRINTS	PR00610	CYTOCHROMEF	coord: 286..306 score: 36.02 coord: 307..327 score: 57.76 coord: 328..343 score: 49.28
IPR002325	Cytochrome f	PFAM	PF01333	Apocytochr_F_C	coord: 253..341 e-value: 4.1E-21 score: 75.2
IPR002325	Cytochrome f	PROSITE	PS51010	CYTF	coord: 242..343 score: 19.359316
None	No IPR available	GENE3D	3.90.226.10		coord: 138..216 e-value: 1.9E-14 score: 55.4
None	No IPR available	GENE3D	2.40.50.100		coord: 253..311 e-value: 1.1E-14 score: 56.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..118
None	No IPR available	PANTHER	PTHR33288	FAMILY NOT NAMED	coord: 243..340
None	No IPR available	PANTHER	PTHR33288:SF9	CYTOCHROME F	coord: 243..340
IPR004282	Chloroplast envelope membrane protein, CemA	PFAM	PF03040	CemA	coord: 205..246 e-value: 7.7E-12 score: 45.6
IPR011762	Acetyl-coenzyme A carboxyltransferase, N-terminal	PROSITE	PS50980	COA_CT_NTER	coord: 1..272 score: 13.834913
IPR011054	Rudiment single hybrid motif	SUPERFAMILY	51246	Rudiment single hybrid motif	coord: 262..312
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 143..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G012060.1	CmaCh11G012060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006629	lipid metabolic process
biological_process	GO:1901576	organic substance biosynthetic process
biological_process	GO:0015979	photosynthesis
biological_process	GO:0044281	small molecule metabolic process
cellular_component	GO:0031361	integral component of thylakoid membrane
cellular_component	GO:0009536	plastid
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding