CmaCh11G012050 (gene) Cucurbita maxima (Rimu) v1.1
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTTAATGATCAGTCAGTTTGCATTGACTTTCACTCATTTGATTCATAGGTTTTGTTATTACACATAATATCTCGAATAAGAAGAAGAAAAGTCTGAGAGGAATGAAATTGAGGAATTTTCTATGGTACATGATTCTACATCGACAACAAGAAAAGAAGAAAGAAATTCTTTAGTGCTGAATTTCGATATTGATTGTTAAATTGCCTTGCTGCGTCAGAAGAAGGATAGCTATACTGATCTCCATTTCAGTTAATTTCTCCATTTACTGATCTCATCCAGAATCGATCCCCTTTTGACTGTAAATATGTGGAGCTCGGCATGTGCTGATATTATCACCAGTATTCGATACTGGGTCTTTCATAGCATTACTATACCTTCTTTCTCTATTGATTGCGGGTTGGTTATTCATTCGTCAGCACGGGTTTAGCTTACGATGTTATTGTAAGCCCTCGTCCAAATGAGTATTTTACCGAGAGCCGACAAGGAATTCCATTAATAACTGGCCGTTTTGATTCTTTGGAACAACTCAATGAATTTAGTAGATCTTTTTAGATGGATTTAATGATCAGTCAGTTTGCATTGACTTTCACTCATTTGATTCATAGCACGGGTTTAGCTTACGATGTTATTGTAAGCCCTCGTCCAAATGAGTATTTTACCGAGAGCCGACAAGGAATTCCATTAATAACTGGCCGTTTTGATTCTTTGGAACAACTCAATGAATTTAGTAGATCTTTTTAG ATGGATTTAATGATCAGTCAGTTTGCATTGACTTTCACTCATTTGATTCATAGCACGGGTTTAGCTTACGATGTTATTGTAAGCCCTCGTCCAAATGAGTATTTTACCGAGAGCCGACAAGGAATTCCATTAATAACTGGCCGTTTTGATTCTTTGGAACAACTCAATGAATTTAGTAGATCTTTTTAG MDLMISQFALTFTHLIHSTGLAYDVIVSPRPNEYFTESRQGIPLITGRFDSLEQLNEFSRSF Homology
BLAST of CmaCh11G012050 vs. ExPASy Swiss-Prot
Match: Q09MG1 (Cytochrome b559 subunit alpha OS=Citrus sinensis OX=2711 GN=psbE PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 7.2e-18 Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of CmaCh11G012050 vs. ExPASy Swiss-Prot
Match: A7M969 (Cytochrome b559 subunit alpha OS=Cuscuta reflexa OX=4129 GN=psbE PE=2 SV=2) HSP 1 Score: 90.5 bits (223), Expect = 7.2e-18 Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of CmaCh11G012050 vs. ExPASy Swiss-Prot
Match: Q70XY9 (Cytochrome b559 subunit alpha OS=Amborella trichopoda OX=13333 GN=psbE PE=3 SV=3) HSP 1 Score: 88.6 bits (218), Expect = 2.7e-17 Identity = 43/48 (89.58%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of CmaCh11G012050 vs. ExPASy Swiss-Prot
Match: P56779 (Cytochrome b559 subunit alpha OS=Arabidopsis thaliana OX=3702 GN=psbE PE=1 SV=4) HSP 1 Score: 88.6 bits (218), Expect = 2.7e-17 Identity = 43/48 (89.58%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of CmaCh11G012050 vs. ExPASy Swiss-Prot
Match: P59702 (Cytochrome b559 subunit alpha OS=Atropa belladonna OX=33113 GN=psbE PE=3 SV=3) HSP 1 Score: 88.6 bits (218), Expect = 2.7e-17 Identity = 43/48 (89.58%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of CmaCh11G012050 vs. ExPASy TrEMBL
Match: A0A1B0V8S8 (Cytochrome b559 subunit alpha OS=Zanthoxylum schinifolium OX=354530 GN=psbE PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.7e-15 Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of CmaCh11G012050 vs. ExPASy TrEMBL
Match: A0A7T3P7E8 (Photosystem II cytochrome b559 subunit alpha OS=Zanthoxylum stipitatum OX=2753884 GN=psbE PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.7e-15 Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of CmaCh11G012050 vs. ExPASy TrEMBL
Match: A0A6M8YGL6 (Cytochrome b559 subunit alpha OS=Oxalis corymbosa OX=210382 GN=psbE PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.7e-15 Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of CmaCh11G012050 vs. ExPASy TrEMBL
Match: A0A7M1Y797 (Cytochrome b559 subunit alpha OS=Zanthoxylum piasezkii OX=1752150 GN=psbE PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.7e-15 Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of CmaCh11G012050 vs. ExPASy TrEMBL
Match: A0A7U0ITK5 (Photosystem II cytochrome b559 alpha subunit OS=Poncirus trifoliata OX=37690 GN=psbE PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.7e-15 Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of CmaCh11G012050 vs. NCBI nr
Match: YP_009059366.1 (photosystem II cytochrome b559 alpha subunit [Citrus aurantiifolia] >YP_009108776.1 photosystem II protein V [Oncinotis tenuiloba] >YP_009163295.1 cytochrome b559 alpha subunit [Trillium tschonoskii] >YP_009166142.1 PsbE [Zanthoxylum piperitum] >YP_009253663.1 photosystem II protein V [Citrus platymamma] >YP_009269456.1 PsbE [Zanthoxylum schinifolium] >YP_009307142.1 PsbE [Zanthoxylum bungeanum] >YP_009320114.1 photosystem II protein V [Citrus depressa] >YP_009333683.1 photosystem II protein V [Murraya koenigii] >YP_009333768.1 photosystem II protein V [Clausena excavata] >YP_009333854.1 photosystem II protein V [Glycosmis mauritiana] >YP_009333939.1 photosystem II protein V [Glycosmis pentaphylla] >YP_009334109.1 photosystem II protein V [Micromelum minutum] >YP_009338647.1 photosystem II protein V [Averrhoa carambola] >YP_009353504.1 photosystem II cytochrome b559 alpha subunit [Citrus maxima] >YP_009364773.1 photosystem II cytochrome b559 alpha subunit [Citrus reticulata] >YP_009365841.1 photosystem II cytochrome b559 alpha subunit [Citrus limon] >YP_009412675.1 PsbE [Phellodendron amurense] >YP_009478378.1 PsbE [Zanthoxylum simulans] >YP_009669586.1 cytochrome b559 subunit alpha [Oxalis drummondii] >YP_009722788.1 photosystem II cytochrome b559 alpha subunit [Citrus polytrifolia] >YP_009730513.1 PsbE [Ruta graveolens] >YP_009736638.1 cytochrome b559 alpha subunit [Trillium camschatcense] >YP_009744802.1 PsbE [Zanthoxylum madagascariense] >YP_009744889.1 PsbE [Zanthoxylum paniculatum] >YP_009744976.1 PsbE [Zanthoxylum pinnatum] >YP_009745063.1 PsbE [Zanthoxylum tragodes] >YP_009750791.1 photosystem II cytochrome b559 alpha subunit [Casimiroa edulis] >YP_009751331.1 photosystem II cytochrome b559 alpha subunit [Pedicularis muscicola] >YP_009776074.1 cytochrome b559 subunit alpha [Terminalia chebula] >YP_009860007.1 cytochrome b559 subunit alpha [Oxalis corymbosa] >YP_009907592.1 photosystem II cytochrome b559 alpha subunit [Terminalia phillyreifolia] >YP_009917096.1 photosystem II cytochrome b559 alpha subunit [Zanthoxylum armatum] >YP_009918756.1 PsbE [Zanthoxylum nitidum] >YP_009937262.1 photosystem II cytochrome b559 alpha subunit [Melicope pteleifolia] >YP_009939886.1 photosystem II cytochrome b559 alpha subunit [Citrus medica] >YP_009940584.1 PsbE [Phellodendron chinense] >YP_009967877.1 PsbE [Zanthoxylum acanthopodium] >YP_009973506.1 photosystem II cytochrome b559 alpha subunit [Oxalis corniculata] >YP_009988457.1 photosystem II cytochrome b559 alpha subunit [Citrus sunki] >YP_009988526.1 photosystem II cytochrome b559 alpha subunit [Citrus aurantium] >YP_009992089.1 photosystem II cytochrome b559 alpha subunit [Tetradium ruticarpum] >YP_010017096.1 photosystem II protein V [Citrus cavaleriei] >YP_010017185.1 photosystem II protein V [Citrus hongheensis] >YP_010020838.1 photosystem II cytochrome b559 alpha subunit [Madhuca hainanensis] >YP_010023151.1 photosystem II cytochrome b559 alpha subunit [Citrus hindsii] >YP_010025707.1 photosystem II protein V [Citrus japonica] >YP_010027566.1 PsbE [Zanthoxylum piasezkii] >YP_010027653.1 PsbE [Zanthoxylum oxyphyllum] >YP_010027740.1 PsbE [Zanthoxylum motuoense] >YP_010027826.1 PsbE [Zanthoxylum multijugum] >YP_010027913.1 PsbE [Zanthoxylum calcicola] >YP_010032464.1 PsbE [Melicope pteleifolia] >YP_010040435.1 photosystem II cytochrome b559 alpha subunit [Sedum emarginatum] >YP_010047572.1 photosystem II cytochrome b559 alpha subunit [Pilea glauca (nom. nud.)] >YP_010116825.1 photosystem II cytochrome b559 alpha subunit [Zanthoxylum asiaticum] >YP_010129115.1 photosystem II cytochrome b559 subunit alpha [Zanthoxylum stipitatum] >YP_010147826.1 photosystem II cytochrome b559 alpha subunit [Citrus trifoliata] >YP_740492.1 photosystem II cytochrome b559 alpha subunit [Citrus sinensis] >Q09MG1.1 RecName: Full=Cytochrome b559 subunit alpha; AltName: Full=PSII reaction center subunit V [Citrus sinensis] >ADD30562.1 photosystem II cytochrome b559 alpha subunit protein [Oxalis latifolia] >AMC31690.1 photosystem II protein V [Oxalis dillenii] >AXZ62564.1 PsbE [Zanthoxylum sp. NH-2018] >AZN61996.1 photosystem II cytochrome b559 alpha subunit [Atalantia kwangtungensis] >EMS54728.1 Cytochrome b559 subunit alpha [Triticum urartu] >QNE88146.1 photosystem II cytochrome b559 alpha subunit [Zanthoxylum nitidum var. nitidum] >QNE88407.1 photosystem II cytochrome b559 alpha subunit [Zanthoxylum nitidum var. tomentosum] >QPZ48168.1 photosystem II cytochrome b559 subunit alpha [Zanthoxylum bungeanum var. punctatum] >QSH90764.1 photosystem II protein V [Orixa japonica] >QTC32753.1 photosystem II cytochrome b559 alpha subunit [Citrus clementina] >QTZ18509.1 photosystem II cytochrome b559 alpha subunit [Glycosmis parviflora] >QWE50069.1 photosystem II protein V [Averrhoa bilimbi] >QWE50238.1 cytochrome b559 subunit alpha [Biophytum sensitivum] >QWE50407.1 cytochrome b559 subunit alpha [Rourea microphylla] >QWW90394.1 photosystem II cytochrome b559 alpha subunit [Tetradium daniellii] >QXE43496.1 cytochrome b559 subunit alpha [Oxalis pes-caprae] >QXT45068.1 photosystem II protein V [Acronychia pedunculata] >QZH43646.1 photosystem II cytochrome b559 alpha subunit [Clausena anisum-olens]) HSP 1 Score: 90.5 bits (223), Expect = 5.5e-15 Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of CmaCh11G012050 vs. NCBI nr
Match: YP_009679620.1 (PsbE [Trichopus zeylanicus subsp. travancoricus] >QDP69935.1 PsbE [Trichopus zeylanicus subsp. travancoricus]) HSP 1 Score: 90.5 bits (223), Expect = 5.5e-15 Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of CmaCh11G012050 vs. NCBI nr
Match: A7M969.2 (RecName: Full=Cytochrome b559 subunit alpha; AltName: Full=PSII reaction center subunit V [Cuscuta reflexa]) HSP 1 Score: 90.5 bits (223), Expect = 5.5e-15 Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of CmaCh11G012050 vs. NCBI nr
Match: AEX95596.1 (photosystem II cytochrome b559 alpha subunit [Haworthia cymbiformis]) HSP 1 Score: 90.1 bits (222), Expect = 7.2e-15 Identity = 43/48 (89.58%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of CmaCh11G012050 vs. NCBI nr
Match: YP_009334024.1 (photosystem II protein V [Merrillia caloxylon] >YP_009400547.1 cytochrome b559 alpha chain [Vanilla aphylla] >YP_009748483.1 cytochrome b559 subunit alpha [Vanilla madagascariensis] >YP_009987821.1 photosystem II cytochrome b559 subunit alpha [Murraya paniculata] >YP_010016163.1 PsbE [Cymbidium erythraeum] >AFA27498.1 photosystem II cytochrome b559 alpha subunit, partial [Cyanotis ciliata] >AFA27536.1 photosystem II cytochrome b559 alpha subunit, partial [Tradescantia ohiensis] >AFU96581.1 PsbE, partial [Podostemum ceratophyllum] >QHD19653.1 cytochrome b559 alpha subunit [Vanilla shenzhenica] >QJX68263.1 photosystem II cytochrome b559 alpha subunit [Commelina communis] >QKW88390.1 photosystem II cytochrome b559 alpha subunit [Tradescantia pallida] >QRV59870.1 photosystem II cytochrome b559 alpha subunit [Pollia japonica] >QUB01696.1 photosystem II cytochrome b559 alpha subunit [Amischotolype hispida] >QUB01768.1 photosystem II cytochrome b559 alpha subunit [Callisia repens] >QUB01852.1 photosystem II cytochrome b559 alpha subunit [Cochliostema odoratissimum] >QUB02021.1 photosystem II cytochrome b559 alpha subunit [Dichorisandra thyrsiflora] >QUB02189.1 photosystem II cytochrome b559 alpha subunit [Gibasis geniculata] >QUB02273.1 photosystem II cytochrome b559 alpha subunit [Murdannia edulis] >QUB02358.1 photosystem II cytochrome b559 alpha subunit [Palisota barteri] >QUB02525.1 photosystem II cytochrome b559 alpha subunit [Rhopalephora scaberrima] >QUB02608.1 photosystem II cytochrome b559 alpha subunit [Siderasis fuscata] >QUB02692.1 photosystem II cytochrome b559 alpha subunit [Streptolirion volubile] >QUB02776.1 photosystem II cytochrome b559 alpha subunit [Tradescantia virginiana] >QUB02860.1 photosystem II cytochrome b559 alpha subunit [Weldenia candida] >QUS64336.1 photosystem II cytochrome b559 alpha subunit [Bulbophyllum pentaneurum] >QVL29565.1 cytochrome b559 subunit alpha [Murraya exotica]) HSP 1 Score: 89.4 bits (220), Expect = 1.2e-14 Identity = 43/48 (89.58%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of CmaCh11G012050 vs. TAIR 10
Match: ATCG00580.1 (photosystem II reaction center protein E ) HSP 1 Score: 86.7 bits (213), Expect = 7.4e-18 Identity = 42/48 (87.50%), Postives = 43/48 (89.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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