CmaCh11G011850 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G011850
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	transcription factor MYB61-like
Location	Cma_Chr11: 6973546 .. 6975361 (-)
RNA-Seq Expression	CmaCh11G011850
Synteny	CmaCh11G011850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTGTCCTTCTCCTCTTCAATTCAGACTCCCCACCACTCCCCTTTCTTAACCCTCCCCTTCTTCTCCCTTCCTTATCATCTCTCTGTTTCCTCCTCTGCTTTCCTCTGCTTTCCTCTGTTTCTGTTGCTGACAGTTCTTCCTTTTCTTCTCATGGGAAGGCACTCTTGCTGCTATAAACAGAAGCTGAGGAAAGGGCTTTGGTCTCCTGATGAAGATGAAAAGCTTCTTAATTACATAACCAACCATGGCCATGGCTGCTGGAGCTCTGTTCCTAAGCTTGCTGGTATGTGCTCTGTTTCTACTATTACTACTACTGCACCGCCCGCACAATGTGCCCTTTTGTTCATCTTTCTTGTTTCTTCTAGGCCTACAACGCTGTGGGAAGAGCTGCCGGCTTCGATGGATTAACTATCTCAGGCCTGATTTAAAAAGGGGTCCTTTCTCCCAGCACGAAGAGGATTTGATCATTGAGCTTCACGCAGTCCTTGGAAACAGGTGCTTTCTTGTTCTTCGATTCATTTCCCCTTTTTGGATTTGGATTCGAAATGGGTTTTTGTTTTTGGATCAGATGGTCGCAGATTGCTGCTCAGCTACCCGGAAGAACAGATAACGAAATCAAGAACTTGTGGAATTCGTGCATTAAGAAGAAATTGAGACAGAAAGGGATTGACCCCAACACGCATAAGCCTGTCTCTGTGTCAGGTGATGCTGACAATGACAGTGAGAAGCAGCTCCCCCCGACATCCACTTCTCATAGAAGCAACGACAACAGCTCCGATGAAGCCATTGAAACGCCGCTGCCGATTGTCACTTCATCCAATTCCAGTTCTCAAATCTACTCCCCAACTCAAGAGTTTTTCCGATTCCAAACCACCACCGCCGGCAGCCACAGAGCTTCTGAATTGGTCGAGTTTCTGTCTTTTCACAATCTCAATTACGTCTCTGAAATCCCAAACCCAAATCCCAATTCTCTCTGTTTCAATCAAACTTCCCACTTACTCCCTCCGCCGCCAATTCCATTAAAACCCACCTGGGAAGGAACCGATTTCGCCGCCGCCGCCGCCGCCACTGCAAGTGGCGGAAACAGCTTCTTTGACGGAGGGAACTTCCCATGGGGACTGCCGGAGTGCGAAAAAACAGAAAAACTGCATCCGACAGCAATAAGAGAAGACAAGAAATGGTCAGAGATTATGGAGAATCCATTCATGATGGGGAACACAACTGGAGAGCAAAATCAAGAATCTCAATCTCAAAATGAATCAATGTATGTAGAGAATTTAAGTACGGCGGCGGAAACAGAGTTCATAACAGAGAGCGGGTGGCAGAGTCAGACACAGAGGCAACAAGCTTCCTCGGATGCTGTATATAACAAACACCTCCATACTCTTACTGTTTCTTTCGGACATACCCTTTAATTCAATCCAATTATTTTCCAAACCAACATACAAGTAAATCAGTTTTTCCTTGTTTTTTTCTTAGCCGATGCTCTGTTTTCATAGCTATTACTAGATTGTGTGCAGTGGTTGTAGTGAAAGACAGGATTTTTCATAAAGAAGAATGAAAAGGAAGGTGAATAAAGATGAGGAAAAGGATATGATGAAATAAATGTGAGAGATTTGTAGTGGGTTTTTCGAGATTGTTAATGTTTTGGTCGCTGTCTTGTCTTTCAGTTTGTTGTGTAAAATTACAGGACAGCCAAAATTGTGTGTTTGAGTATGAACTTGCAGGTATAATATACACAATACAACAAATGTCAGAAAGAGAAGACAAGGGAATTTGAATGAAAGAGTTGCCACTTTTTTCTTTGATTGCTA

mRNA sequence

CTCTGTCCTTCTCCTCTTCAATTCAGACTCCCCACCACTCCCCTTTCTTAACCCTCCCCTTCTTCTCCCTTCCTTATCATCTCTCTGTTTCCTCCTCTGCTTTCCTCTGCTTTCCTCTGTTTCTGTTGCTGACAGTTCTTCCTTTTCTTCTCATGGGAAGGCACTCTTGCTGCTATAAACAGAAGCTGAGGAAAGGGCTTTGGTCTCCTGATGAAGATGAAAAGCTTCTTAATTACATAACCAACCATGGCCATGGCTGCTGGAGCTCTGTTCCTAAGCTTGCTGGCCTACAACGCTGTGGGAAGAGCTGCCGGCTTCGATGGATTAACTATCTCAGGCCTGATTTAAAAAGGGGTCCTTTCTCCCAGCACGAAGAGGATTTGATCATTGAGCTTCACGCAGTCCTTGGAAACAGATGGTCGCAGATTGCTGCTCAGCTACCCGGAAGAACAGATAACGAAATCAAGAACTTGTGGAATTCGTGCATTAAGAAGAAATTGAGACAGAAAGGGATTGACCCCAACACGCATAAGCCTGTCTCTGTGTCAGGTGATGCTGACAATGACAGTGAGAAGCAGCTCCCCCCGACATCCACTTCTCATAGAAGCAACGACAACAGCTCCGATGAAGCCATTGAAACGCCGCTGCCGATTGTCACTTCATCCAATTCCAGTTCTCAAATCTACTCCCCAACTCAAGAGTTTTTCCGATTCCAAACCACCACCGCCGGCAGCCACAGAGCTTCTGAATTGGTCGAGTTTCTGTCTTTTCACAATCTCAATTACGTCTCTGAAATCCCAAACCCAAATCCCAATTCTCTCTGTTTCAATCAAACTTCCCACTTACTCCCTCCGCCGCCAATTCCATTAAAACCCACCTGGGAAGGAACCGATTTCGCCGCCGCCGCCGCCGCCACTGCAAGTGGCGGAAACAGCTTCTTTGACGGAGGGAACTTCCCATGGGGACTGCCGGAGTGCGAAAAAACAGAAAAACTGCATCCGACAGCAATAAGAGAAGACAAGAAATGGTCAGAGATTATGGAGAATCCATTCATGATGGGGAACACAACTGGAGAGCAAAATCAAGAATCTCAATCTCAAAATGAATCAATGTATGTAGAGAATTTAAGTACGGCGGCGGAAACAGAGTTCATAACAGAGAGCGGGTGGCAGAGTCAGACACAGAGGCAACAAGCTTCCTCGGATGCTGTATATAACAAACACCTCCATACTCTTACTGTTTCTTTCGGACATACCCTTTAATTCAATCCAATTATTTTCCAAACCAACATACAAGTAAATCAGTTTTTCCTTGTTTTTTTCTTAGCCGATGCTCTGTTTTCATAGCTATTACTAGATTGTGTGCAGTGGTTGTAGTGAAAGACAGGATTTTTCATAAAGAAGAATGAAAAGGAAGGTGAATAAAGATGAGGAAAAGGATATGATGAAATAAATGTGAGAGATTTGTAGTGGGTTTTTCGAGATTGTTAATGTTTTGGTCGCTGTCTTGTCTTTCAGTTTGTTGTGTAAAATTACAGGACAGCCAAAATTGTGTGTTTGAGTATGAACTTGCAGGTATAATATACACAATACAACAAATGTCAGAAAGAGAAGACAAGGGAATTTGAATGAAAGAGTTGCCACTTTTTTCTTTGATTGCTA

Coding sequence (CDS)

ATGGGAAGGCACTCTTGCTGCTATAAACAGAAGCTGAGGAAAGGGCTTTGGTCTCCTGATGAAGATGAAAAGCTTCTTAATTACATAACCAACCATGGCCATGGCTGCTGGAGCTCTGTTCCTAAGCTTGCTGGCCTACAACGCTGTGGGAAGAGCTGCCGGCTTCGATGGATTAACTATCTCAGGCCTGATTTAAAAAGGGGTCCTTTCTCCCAGCACGAAGAGGATTTGATCATTGAGCTTCACGCAGTCCTTGGAAACAGATGGTCGCAGATTGCTGCTCAGCTACCCGGAAGAACAGATAACGAAATCAAGAACTTGTGGAATTCGTGCATTAAGAAGAAATTGAGACAGAAAGGGATTGACCCCAACACGCATAAGCCTGTCTCTGTGTCAGGTGATGCTGACAATGACAGTGAGAAGCAGCTCCCCCCGACATCCACTTCTCATAGAAGCAACGACAACAGCTCCGATGAAGCCATTGAAACGCCGCTGCCGATTGTCACTTCATCCAATTCCAGTTCTCAAATCTACTCCCCAACTCAAGAGTTTTTCCGATTCCAAACCACCACCGCCGGCAGCCACAGAGCTTCTGAATTGGTCGAGTTTCTGTCTTTTCACAATCTCAATTACGTCTCTGAAATCCCAAACCCAAATCCCAATTCTCTCTGTTTCAATCAAACTTCCCACTTACTCCCTCCGCCGCCAATTCCATTAAAACCCACCTGGGAAGGAACCGATTTCGCCGCCGCCGCCGCCGCCACTGCAAGTGGCGGAAACAGCTTCTTTGACGGAGGGAACTTCCCATGGGGACTGCCGGAGTGCGAAAAAACAGAAAAACTGCATCCGACAGCAATAAGAGAAGACAAGAAATGGTCAGAGATTATGGAGAATCCATTCATGATGGGGAACACAACTGGAGAGCAAAATCAAGAATCTCAATCTCAAAATGAATCAATGTATGTAGAGAATTTAAGTACGGCGGCGGAAACAGAGTTCATAACAGAGAGCGGGTGGCAGAGTCAGACACAGAGGCAACAAGCTTCCTCGGATGCTGTATATAACAAACACCTCCATACTCTTACTGTTTCTTTCGGACATACCCTTTAA

Protein sequence

MGRHSCCYKQKLRKGLWSPDEDEKLLNYITNHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGPFSQHEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPVSVSGDADNDSEKQLPPTSTSHRSNDNSSDEAIETPLPIVTSSNSSSQIYSPTQEFFRFQTTTAGSHRASELVEFLSFHNLNYVSEIPNPNPNSLCFNQTSHLLPPPPIPLKPTWEGTDFAAAAAATASGGNSFFDGGNFPWGLPECEKTEKLHPTAIREDKKWSEIMENPFMMGNTTGEQNQESQSQNESMYVENLSTAAETEFITESGWQSQTQRQQASSDAVYNKHLHTLTVSFGHTL

Homology

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BLAST of CmaCh11G011850 vs. ExPASy Swiss-Prot
Match: Q8VZQ2 (Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 2.1e-80
Identity = 183/405 (45.19%), Postives = 236/405 (58.27%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPDEDEKLLNYITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSP+EDEKLL +ITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LRPDLKRGPFSQHEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 120
           LRPDLKRG FS  EE+LI+ELHAVLGNRWSQIA++LPGRTDNEIKNLWNS IKKKL+Q+G
Sbjct: 61  LRPDLKRGAFSPEEENLIVELHAVLGNRWSQIASRLPGRTDNEIKNLWNSSIKKKLKQRG 120

Query: 121 IDPNTHKPVSVSGDADNDSEKQLPPTSTSHRS-NDNSSDEAIETPLPIVTSSNSSSQIYS 180
           IDPNTHKP+S   + ++ S+K  P TS + RS ND+ S            SS+S++    
Sbjct: 121 IDPNTHKPIS---EVESFSDKDKPTTSNNKRSGNDHKS-----------PSSSSAT---- 180

Query: 181 PTQEFFRFQTTTAGSHRASELVEFLSFHNLNYVSE--IPNPNPNSLCFNQTSHLLPP--- 240
             Q+FF          R S+L ++  F  LN+ S   +     +SLC      ++PP   
Sbjct: 181 -NQDFF--------LERPSDLSDYFGFQKLNFNSNLGLSVTTDSSLC-----SMIPPQFS 240

Query: 241 ----------PPIPLKPT------------WEGTDFAAAAA------ATASGGNSFFDGG 300
                      P+ +KP+              G D    AA         +  ++FFD G
Sbjct: 241 PGNMVGSVLQTPVCVKPSISLPPDNNSSSPISGGDHVKLAAPNWEFQTNNNNTSNFFDNG 300

Query: 301 NFPWGLPECE-KTEKLHPTAIREDKKWSEIMENPFMMGNTTGEQ-NQESQSQNESMYVEN 360
            F W +P     + ++ P    E+ KWSE +  PF +G+T   Q +Q    ++E+ Y+ N
Sbjct: 301 GFSWSIPNSSTSSSQVKPNHNFEEIKWSEYLNTPFFIGSTVQSQTSQPIYIKSETDYLAN 360

Query: 361 LSTAAETEFITESGWQSQTQRQQASSDAVYNKHLHTLTVSFGHTL 370
           +S   +        W          +  V++K L  + VSFG +L
Sbjct: 361 VSNMTDP-------WSQNENLGTTETSDVFSKDLQRMAVSFGQSL 366

[Close]

BLAST of CmaCh11G011850 vs. ExPASy Swiss-Prot
Match: Q8LPH6 (Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.4e-65
Identity = 141/278 (50.72%), Postives = 169/278 (60.79%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPDEDEKLLNYITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCC+KQKLRKGLWSP+EDEKLLNYIT HGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LRPDLKRGPFSQHEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 120
           LRPDLKRG FSQ EE LIIELHA LGNRWSQIA +LPGRTDNEIKN WNSC+KKKLR+KG
Sbjct: 61  LRPDLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLRRKG 120

Query: 121 IDPNTHKPVSVSG-------DADNDSEKQLPPTSTSHRSNDNS---SDEAIETPLPIVTS 180
           IDP THKP+  +        D    S + +  T + +  +D S   S +      P  T+
Sbjct: 121 IDPTTHKPLITNELQSLNVIDQKLTSSEVVKSTGSINNLHDQSMVVSSQQGPWWFPANTT 180

Query: 181 SNSSSQIYSPTQEFFRFQTTTAGSHRASELVEFLSFHNLNYVSEIPNPNPNSLCFNQTSH 240
           + + +  +      F    TT  S +   L+  +S       S  P P         TS+
Sbjct: 181 TTNQNSAFC-----FSSSNTTTVSDQIVSLISSMS------TSSSPTP--------MTSN 240

Query: 241 LLPPPPIPLKPTWEGTDFAAAAAATASGGNSFFDGGNF 269
             P P       WE  ++     + ++   S F G  +
Sbjct: 241 FSPAP-----NNWEQLNYCNTVPSQSNSIYSAFFGNQY 254

[Close]

BLAST of CmaCh11G011850 vs. ExPASy Swiss-Prot
Match: P20027 (Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3)

HSP 1 Score: 218.0 bits (554), Expect = 1.8e-55
Identity = 105/156 (67.31%), Postives = 119/156 (76.28%), Query Frame = 0


Query: 1   MGRHS--CCYKQKLRKGLWSPDEDEKLLNYITNHGHGCWSSVPKLAGLQRCGKSCRLRWI 60
           MGR S     + K+RKGLWSP+EDEKL N+I  HG GCWSSVP+LA L RCGKSCRLRWI
Sbjct: 1   MGRPSSGAVGQPKVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWI 60

Query: 61  NYLRPDLKRGPFSQHEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 120
           NYLRPDLKRG FSQ EED I+ LH +LGNRWSQIA+ LPGRTDNEIKN WNSCIKKKLRQ
Sbjct: 61  NYLRPDLKRGCFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQ 120

Query: 121 KGIDPNTHKPVSVSG---------DADNDSEKQLPP 146
           +GIDP THKP++ +          DA+ +  K L P
Sbjct: 121 QGIDPATHKPMASADTATAAAALPDAEEEDRKPLCP 156

[Close]

BLAST of CmaCh11G011850 vs. ExPASy Swiss-Prot
Match: P80073 (Myb-related protein Pp2 OS=Physcomitrium patens OX=3218 GN=PP2 PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.2e-51
Identity = 95/161 (59.01%), Postives = 126/161 (78.26%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPDEDEKLLNYITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR  CC K  LR+G W+ +ED+KL+++ITN+G  CW ++PKLAGL RCGKSCRLRW NY
Sbjct: 1   MGRKPCCEKVGLRRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGPFSQHEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 120
           LRPDLKRG FS+ EE+LI++LHA LGNRWS+IAAQLPGRTDNEIKN WN+ +KK+LR +G
Sbjct: 61  LRPDLKRGIFSEAEENLILDLHATLGNRWSRIAAQLPGRTDNEIKNYWNTRLKKRLRSQG 120

Query: 121 IDPNTHKPVSVS--GDADNDSEKQLPPTSTSHRSNDNSSDE 160
           +DPNTH P+  S   D ++D++ +   +S    S+ + S++
Sbjct: 121 LDPNTHLPLEDSKLDDTEDDTDDEGGDSSDVTMSDASKSEK 161

[Close]

BLAST of CmaCh11G011850 vs. ExPASy Swiss-Prot
Match: O49608 (Transcription factor MYB32 OS=Arabidopsis thaliana OX=3702 GN=MYB32 PE=1 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 5.9e-51
Identity = 93/159 (58.49%), Postives = 116/159 (72.96%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPDEDEKLLNYITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR  CC K    KG W+ +ED+KL++YI  HG GCW S+P+ AGLQRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINY 60

Query: 61  LRPDLKRGPFSQHEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 120
           LRPDLKRG F+  E+DLII+LH++LGN+WS IA +LPGRTDNEIKN WN+ +K+KL +KG
Sbjct: 61  LRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTHVKRKLLRKG 120

Query: 121 IDPNTHKPVSVSGDADNDSEKQLPPTSTSHRSNDNSSDE 160
           IDP TH+P++               T TS  S+D+S  E
Sbjct: 121 IDPATHRPIN--------------ETKTSQDSSDSSKTE 145

[Close]

BLAST of CmaCh11G011850 vs. TAIR 10
Match: AT1G09540.1 (myb domain protein 61 )

HSP 1 Score: 300.8 bits (769), Expect = 1.5e-81
Identity = 183/405 (45.19%), Postives = 236/405 (58.27%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPDEDEKLLNYITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSP+EDEKLL +ITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LRPDLKRGPFSQHEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 120
           LRPDLKRG FS  EE+LI+ELHAVLGNRWSQIA++LPGRTDNEIKNLWNS IKKKL+Q+G
Sbjct: 61  LRPDLKRGAFSPEEENLIVELHAVLGNRWSQIASRLPGRTDNEIKNLWNSSIKKKLKQRG 120

Query: 121 IDPNTHKPVSVSGDADNDSEKQLPPTSTSHRS-NDNSSDEAIETPLPIVTSSNSSSQIYS 180
           IDPNTHKP+S   + ++ S+K  P TS + RS ND+ S            SS+S++    
Sbjct: 121 IDPNTHKPIS---EVESFSDKDKPTTSNNKRSGNDHKS-----------PSSSSAT---- 180

Query: 181 PTQEFFRFQTTTAGSHRASELVEFLSFHNLNYVSE--IPNPNPNSLCFNQTSHLLPP--- 240
             Q+FF          R S+L ++  F  LN+ S   +     +SLC      ++PP   
Sbjct: 181 -NQDFF--------LERPSDLSDYFGFQKLNFNSNLGLSVTTDSSLC-----SMIPPQFS 240

Query: 241 ----------PPIPLKPT------------WEGTDFAAAAA------ATASGGNSFFDGG 300
                      P+ +KP+              G D    AA         +  ++FFD G
Sbjct: 241 PGNMVGSVLQTPVCVKPSISLPPDNNSSSPISGGDHVKLAAPNWEFQTNNNNTSNFFDNG 300

Query: 301 NFPWGLPECE-KTEKLHPTAIREDKKWSEIMENPFMMGNTTGEQ-NQESQSQNESMYVEN 360
            F W +P     + ++ P    E+ KWSE +  PF +G+T   Q +Q    ++E+ Y+ N
Sbjct: 301 GFSWSIPNSSTSSSQVKPNHNFEEIKWSEYLNTPFFIGSTVQSQTSQPIYIKSETDYLAN 360

Query: 361 LSTAAETEFITESGWQSQTQRQQASSDAVYNKHLHTLTVSFGHTL 370
           +S   +        W          +  V++K L  + VSFG +L
Sbjct: 361 VSNMTDP-------WSQNENLGTTETSDVFSKDLQRMAVSFGQSL 366

[Close]

BLAST of CmaCh11G011850 vs. TAIR 10
Match: AT1G57560.1 (myb domain protein 50 )

HSP 1 Score: 254.6 bits (649), Expect = 1.2e-67
Identity = 161/366 (43.99%), Postives = 201/366 (54.92%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPDEDEKLLNYITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           M RHSCCYKQKLRKGLWSP+EDEKLLNYIT HGHGCWSSVPKLAGL+RCGKSCRLRWINY
Sbjct: 1   MKRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLERCGKSCRLRWINY 60

Query: 61  LRPDLKRGPFSQHEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 120
           LRPDLKRG FS  E++LI+ELHAVLGNRWSQIAA+LPGRTDNEIKNLWNSCIKKKL +KG
Sbjct: 61  LRPDLKRGAFSSEEQNLIVELHAVLGNRWSQIAARLPGRTDNEIKNLWNSCIKKKLMKKG 120

Query: 121 IDPNTHKPVSVSGDADNDSEKQLPPTSTSHRSNDNSSDEAIETPLPIVTSSNSSSQIYSP 180
           IDP THKP+S  G   N S+            N+NS+  + ET   +     S    YS 
Sbjct: 121 IDPITHKPLSEVGKETNRSD------------NNNSTSFSSETNQDLFVKKTSDFAEYSA 180

Query: 181 TQEFFRFQTTTAGSHRASELVEFLSFHNLNYVSEIPNPNPNSLCFNQTSHLLPPPPIPLK 240
               F+ + + + S R S      +  N++  S + N   ++    + S +L PPP    
Sbjct: 181 ----FQKEESNSVSLRNSLSSMIPTQFNIDDGS-VSNAGFDTQVCVKPSIILLPPPNNTS 240

Query: 241 PTWEGTDFAAAAAATASGGNSFFDGGNFPWGLPECEKTEKLHPTAIREDKKWSEIMENPF 300
            T  G D    +       +      N P                  E+ KWSE      
Sbjct: 241 STVSGQDHVNVSEPNWESNSGTTSHLNNPG----------------MEEMKWSE------ 300

Query: 301 MMGNTTGEQNQESQSQNESMYVENLSTAAETEFITESGWQSQTQRQQASSDAVYNKHLHT 360
                        +  NES++   +   +ET+F +   +       Q+ +  V+ K L  
Sbjct: 301 -------------EYLNESLFSTQVYVKSETDFNSNIAF----PWSQSQACDVFPKDLQR 310

Query: 361 LTVSFG 367
           +  SFG
Sbjct: 361 MAFSFG 310

[Close]

BLAST of CmaCh11G011850 vs. TAIR 10
Match: AT4G01680.1 (myb domain protein 55 )

HSP 1 Score: 253.8 bits (647), Expect = 2.1e-67
Identity = 123/186 (66.13%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPDEDEKLLNYITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSP+EDEKLL YIT +GHGCWSSVPK AGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQAGLQRCGKSCRLRWINY 60

Query: 61  LRPDLKRGPFSQHEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 120
           LRPDLKRG FSQ EE+LIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSC+KKKLR +G
Sbjct: 61  LRPDLKRGAFSQDEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRLRG 120

Query: 121 IDPNTHKPVSVSGDADNDSEKQLPPTSTSHRSNDNSSDEAIETPLPIVTSSNSSSQIYSP 180
           IDP THK ++   + +  ++ +  P   S ++    +D +  T       +N++  +Y+ 
Sbjct: 121 IDPVTHKLLT---EIETGTDDKTKPVEKSQQTYLVETDGSSSTTTCSTNQNNNTDHLYTG 180

Query: 181 TQEFFR 187
              F R
Sbjct: 181 NFGFQR 183

[Close]

BLAST of CmaCh11G011850 vs. TAIR 10
Match: AT4G01680.3 (myb domain protein 55 )

HSP 1 Score: 253.8 bits (647), Expect = 2.1e-67
Identity = 123/186 (66.13%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPDEDEKLLNYITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSP+EDEKLL YIT +GHGCWSSVPK AGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQAGLQRCGKSCRLRWINY 60

Query: 61  LRPDLKRGPFSQHEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 120
           LRPDLKRG FSQ EE+LIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSC+KKKLR +G
Sbjct: 61  LRPDLKRGAFSQDEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRLRG 120

Query: 121 IDPNTHKPVSVSGDADNDSEKQLPPTSTSHRSNDNSSDEAIETPLPIVTSSNSSSQIYSP 180
           IDP THK ++   + +  ++ +  P   S ++    +D +  T       +N++  +Y+ 
Sbjct: 121 IDPVTHKLLT---EIETGTDDKTKPVEKSQQTYLVETDGSSSTTTCSTNQNNNTDHLYTG 180

Query: 181 TQEFFR 187
              F R
Sbjct: 181 NFGFQR 183

[Close]

BLAST of CmaCh11G011850 vs. TAIR 10
Match: AT5G26660.1 (myb domain protein 86 )

HSP 1 Score: 251.5 bits (641), Expect = 1.0e-66
Identity = 141/278 (50.72%), Postives = 169/278 (60.79%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPDEDEKLLNYITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCC+KQKLRKGLWSP+EDEKLLNYIT HGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LRPDLKRGPFSQHEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 120
           LRPDLKRG FSQ EE LIIELHA LGNRWSQIA +LPGRTDNEIKN WNSC+KKKLR+KG
Sbjct: 61  LRPDLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLRRKG 120

Query: 121 IDPNTHKPVSVSG-------DADNDSEKQLPPTSTSHRSNDNS---SDEAIETPLPIVTS 180
           IDP THKP+  +        D    S + +  T + +  +D S   S +      P  T+
Sbjct: 121 IDPTTHKPLITNELQSLNVIDQKLTSSEVVKSTGSINNLHDQSMVVSSQQGPWWFPANTT 180

Query: 181 SNSSSQIYSPTQEFFRFQTTTAGSHRASELVEFLSFHNLNYVSEIPNPNPNSLCFNQTSH 240
           + + +  +      F    TT  S +   L+  +S       S  P P         TS+
Sbjct: 181 TTNQNSAFC-----FSSSNTTTVSDQIVSLISSMS------TSSSPTP--------MTSN 240

Query: 241 LLPPPPIPLKPTWEGTDFAAAAAATASGGNSFFDGGNF 269
             P P       WE  ++     + ++   S F G  +
Sbjct: 241 FSPAP-----NNWEQLNYCNTVPSQSNSIYSAFFGNQY 254

The following BLAST results are available for this feature:

BLAST of CmaCh11G011850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZQ2	2.1e-80	45.19	Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1	[more]
Q8LPH6	1.4e-65	50.72	Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1	[more]
P20027	1.8e-55	67.31	Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3	[more]
P80073	1.2e-51	59.01	Myb-related protein Pp2 OS=Physcomitrium patens OX=3218 GN=PP2 PE=2 SV=1	[more]
O49608	5.9e-51	58.49	Transcription factor MYB32 OS=Arabidopsis thaliana OX=3702 GN=MYB32 PE=1 SV=1	[more]

BLAST of CmaCh11G011850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09540.1	1.5e-81	45.19	myb domain protein 61	[more]
AT1G57560.1	1.2e-67	43.99	myb domain protein 50	[more]
AT4G01680.1	2.1e-67	66.13	myb domain protein 55	[more]
AT4G01680.3	2.1e-67	66.13	myb domain protein 55	[more]
AT5G26660.1	1.0e-66	50.72	myb domain protein 86	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 66..114 e-value: 2.4E-12 score: 57.0 coord: 13..63 e-value: 1.2E-11 score: 54.7
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..61 score: 10.975126
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 62..112 score: 9.953235
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 69..109 e-value: 5.15201E-9 score: 49.4962
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 17..61 e-value: 1.91147E-10 score: 53.7334
None	No IPR available	GENE3D	1.10.10.60		coord: 68..143 e-value: 2.7E-20 score: 74.2
None	No IPR available	GENE3D	1.10.10.60		coord: 11..67 e-value: 3.2E-19 score: 70.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..160
None	No IPR available	PANTHER	PTHR47997	MYB DOMAIN PROTEIN 55	coord: 259..361
None	No IPR available	PANTHER	PTHR47997	MYB DOMAIN PROTEIN 55	coord: 1..229
None	No IPR available	PANTHER	PTHR47997:SF41	HOMEODOMAIN-RELATED	coord: 259..361
None	No IPR available	PANTHER	PTHR47997:SF41	HOMEODOMAIN-RELATED	coord: 1..229
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..61 e-value: 2.6E-14 score: 53.1 coord: 67..110 e-value: 2.3E-11 score: 43.7
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..61 score: 19.634254
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 62..116 score: 24.20306
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 12..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G011850.1	CmaCh11G011850.1	mRNA