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CmaCh11G011480 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAAATCGAAAAAAAAAAAAAAGAAAAAACATCTTCTTCTTTCTCCTTACATCTCTGTTCTTTCAGAAATTCTCTCTCGTCTGTTCGTTCACCCCTGTCTTTTGATTTAAGGAACACCTCTTCTTTTTCCCCTTTTCCACTTCGATTCTCTTACGAATTCCCCTCCTTCACTAGAATCTCGATTTGTATTTTTGTTCAACGATTTGTTTGGTTTCTTTTGTTGTTTTTTTTTTTCTTTTTGTTCTTCGATTGGTGGCTTAGGGGTTTTAGATTTTTGGTTCTTACATGGGGTTGGGTAACGATGACGAAGCGGTGGCGGAAGATGGCGATTATGGCGACGGAGGATGTGGTGCCGGTTGTGGAAAGTCCTTTGGTTCTGTCCCGTGTTCGATCTGTCTCGATGTTGTTGACGATTCTGGAGATAGATCTTGGGCTAAGCTTCAATGTGGCCATCAATTTCATCTTGGTGAGTTTTTTTACGAATTGCCCTCTTTTTTGTTCCCTCTTGTTGAAACTTGTGTATTTTGGGCGTAATAATGGATTTAGGGTCCTTGTGATTTTAGATCTGTTTCTTCTTTTCTTTTGCTGAAATTAAAACTCTTAAGTTTTTGCTTTTGTTGTTTCAATTGTTTTTGTCAGAAAAGGAAATGGTTTAGATTAGATACATATTTTCTTTTTTGGTTGATTTTTTTATTGTACTTCTTTTGTTTTCTTAGATTGCATTGGTTCGGCATTCAACATTAAAGGGGCAATGCAATGCCCCAATTGTCGGAAGATTGAAAAAGGTCAATGGCTTTATGCTAATGGCTGTAGGTCGTTTCCAGATTTTAGTATGGATGATTGGACCCACGAAGAGGATCTCTATGATCTAAGCTACTCAGAAATGGTAAGCGATTGTCTTTCATTGATTGACTCGTGTACGTTACATTGTGGGTATCCATGGAAATTTTCAATCATCAGGGCACCATGTGAACAAGAACAAGAAGTTAAATTAACCAGGAACTGATAATTGTGATGCAAACTTTTCCTTTCACTTTGGGGAATGTTCTTCAACTGTTCTAGATTTTAATCTGCATAGTCAAAAGCGGTGTCCCATGGGGAGATGGTTGATACTTGGAATCATTTGAAGTCCTCGCCGTTTAAAAGGAGAACGAACTAGTTCCCTCTCAATAATTATTACCAAAAATTATTGCTCCTTTTTTAATCACTGATTATTTTTCGTTTATTTTTAATTACTTCTGTTGTAATTTTTATCTTTTATAGTCTGACATGTGTTAGGTTGACCGATCTTTTTGTGGCCTTCTTAGGTAGTTCTATATCTTTGGTGACAGCAAGTTTTATCATTTAAAATAGTTCATTGTGTGAATTGATTTGAAATGTGCTCGTGGCTGATGCTCAGAAACGACATGCCTAAATTCCATGTGCATTCACGTTTAAATACTTGGGTGTTATAAATCGTGTTTATAGATTTATCTTGCATGAGTTCATATTTTAAATGGGTCAATGACCTGCTTGTTTACTCATTGTATTAAGTTCTTTCCACCAAATTTTAGCTGGAATTTGATTTGTTGCAGGCCTTTGGAGTTCAATGGTGTCCGTTTGGCAACTTAGCTCGACTTCCTCCTTCATTTGAGTAAGTTTTGATTTGTTCATTAATGATGTAAGGATAATTGACACTCTGGTTTTAATGTTGATGTCTTCTTTCTTGGTTCTGTTCCTGTTCTGTTCATGTTCCTGTAATGACCCAGATCTACCGCTAGTAGATATTGTCCTCTTTGGGCTTTTCCTTTCGGGCTTGCCCTCAAGGCTTTAAAACGCGTCTGCTAGGGGAAGGTTTCTACACCCTTATAAATGGTGATTTGTTCTCCTCCCCAACCAATGTGGGACATCACATATGATGCATTGATACTTATTAGTTGGTAACTGATTCCTAGTACAGGCATACCAATTGGAAGAAAAAATAGATGGAGAGTAACCACTAAATTCTCTAGTTGGAGGGCTCAATAAGGAAGTACCCCAAACAATAGCATCCCATGTTTCCATTCAATCTCAAAATCTCTTCATCAAAATGTTCCAAAATGTGGCTCTAATGGCATTTGATTATAAGACATTGGCTTACTTTTTTAACAAGGAGCAACGGAACCAAGAGTGATTTCTATGGTGCACTGAGTTGGGGAGAGAGATTCATATTGAAGGTTTGAAGCAGTTTCCATTGAACATGGAGCAAGGGAAACTCTAATAAAGCTGATCTCCTCTCTTACAAATTATAATCGAGTATGCTTCGGTTGGAGGGAAACGATTTGTACTTTGGACTTAATCATTAGTGTCAAGACCTCTGCCTTTAAGAATAATCCATTCAAATACCTTTCCTTCTTCATGACTTTCTTTCCAGTTGAAGCTTCGAAGATAGCTTTAGAGAGATCACCAGCACCACGTAAAGCCTACAAAGAGAGAGCTTTCCATAAAGGCCCTCAAACAAATGTGTTGATTTGGAAATTTTCATTTTGATTAATTGGGTAAAACTAACAAGGTTGCCTGATCTACCTTCGATTGAAGAAAGGAAGGGTTTTCTTTTTTATGTTTTTTGAGTTTCCTTTCTTTTATTTGTTCAATCTCTCTTTGTTTATCCATATTTGATATTGGGGATCTTCATTGTGGCTGGGGTGCCATAGATGTTCTTATAGAAATACAAAAGGTATTACCCATCTCATACAATATGGTAGGAACCTATGAATAGGCTTTGCAAGAACAATAAAAGTTGCACAATGTATGGTAGAGTTTCTTGGTCTAATCATTTGAGGATGACTCCCCCAGAATTCTTGCAAGTGACATGTGTTCGGGTAAAAAGTACTGTAACCATGTAATAGTAGCATGTTATGCTCGGTTGACTGTCCAAATTTTAGCCTCCTTGCACTCTTTAGATTTCAGAAGTTCCGTGGCTGATCAAGATGACAATGAATTCAGGAGTCTAGGACGGACATTCTGGAGCTTCTGCTCTTCTTCAGCCATTCTTATAAAGAGGGGCCTAGAAAGGGTGGCCTTTGCAATACCAACCAAGAAGGGAGAATGAATGCCTCAAAAATCAACTGTTTCCCTGAGTCATAAAGCTGCTTCTTGGATTGTTGTAGAATAAGTAGGAAAAATGACTTTACTTGAAAGAACGTTACTGGAACGAGAGGGAATCACTTGCCGGTCTTCCTCCTTTAGTAGCTCTTTATTGGTAGGTGCACTTATGCCATTTCTAATGGCCTATTTGGTTGTCTTGCTATGCACCACTTGAAAATTTTCATTGAATAATGAAATTTTCTTTGCCTACTTTACGTGTTAGGGAAGACGATTCTTTCCCTTTCAATAGTGGTCTCGTTCTCATCAACGACAGCTGCTGAGAATGATGAGATTCATATGAATACTTTTATAAATTTTCAGTTTCTATATATGTCTGGCTGCTAGCCAAACAGAAATTTAGACAGATCTTTGTTGCAATTATTGTGTAAATACAGAATCTTCCATCCTGATGTCTTGAATCGTTCTCATGTTTAACTTTTTCAGGGATGGCGACTTTTCGTCAACTGCTTGTAAGATTTCTCTCCCCCACAGAAATTGTTGATCCATTTTTTAGCTGCAGTTTGAGAAAGCAACCAAATTTGACCGGGTTGATAATGTTGTGATGCAGATCATGACCTTTTGGGACAACATGCAGTTTTCGCCGAACATACCGCAGTATCTTCTGCAACTCATCCTTGTCCATATATTGCTTACTTTGGACCTATTCATCCCTCTTCATCAAGTTCAAGTGCTTCTGAAGCTTCGAATTTCAGTGGTCACTGGAATGGCCCCCCATCAGTACCCAGTGAAGTACCATCTTCCTATGCATTTCCTGCAGTGGATCTTCATTATCAAAATTGGGAGCATCACTCACTGCCCTTTTCCACAACACACAATCGTGTTGCTGGTGCTGATCAGCCGACGGTTGCATCCGTTGCCCAAAGATCTGCTACTAGAGTCAGTACTGAACTACCAAGATCCGGAATGCATCCTTTCCTTGTTGGTCATAGGTATGTCTTAACATAATTGGATATAACCAGTTGAACTTCTTAGTCTTAATGTTACAGAAATCCTATGTAACTGTCCAACCCCACCGCTAGCAGATATTGTCCTCTTTGGACTTTTCCTTTCGGATTTCCTCAGGGTTCTCAAAATGCATCTGCTAAGGCGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCTCCTTCCCAACCAATGTGGGATCTCAAAATCTACCCTCCTTCGGGGCCTAGCGTTTTTGCTAGCACACCGTCTCATGTACACCTCCCTTCGAGTTTCAGTCTCCTTGCTGACATATTGCCCGGTGTCTGGCTCTGATACCATTTGTAGCAGCCTAAGTCCACTGTTACAGGCTGTCTTGTTGTGGAGGCAGTTGCCTTCCTCCGACACTGGTTTATAGCCATGTACCACTTAATTGTTTGGTTATCTCAAGCATCATGAGAAACAGCCCTTCTCTCTTTTCTCAAACAGAGAGAAGCCCTTTAATTTGAACAATATTTCTTTTGATTCACAGTTCCAGTGCAAGGGTTGGGAGTTCGGTTGCTTCCTCAATGATTCCTCCATATCCTGGCAGCAATGCACGTGCTCGTGACCGAGTTCAAGCTCTCCAAGCGTATTATCAACAACCTAGCACTACAGGAAGCATTCGCGCACCTGCAATATCTGGTGCCAGAAGATCAAGTAGTCACAGAGGGCTGTCACAAGCACCCATGGCCTCATCATCTGATCAACCCAATGGCTTCTATTTCTACTCATCAGCATCATCGGGTCGTAATTTCCAACTGGAAAACACTGTGCCAAATCGTTTTCACCCATGGGAAAGAGATCACTTGCCTTCTTTCGGTTTGAACCAGATGGAAAGAGATCCAGGTTGGGGAGAGATTCATCAGGGAGCCGCCAGTGTTTCTGATCCAAGCATCAGGTCCAGCAGCTTTCGTCAAAGGCATGGTCCCGAGAGGGCATCGTCACAAAATTGGTCATAGACCAACCATCATTTACTTACCGATTCCCGGTGAGGCTAAAACTATCACTATGATGACTTGAAACTGAAATTTATGTAATGATTGGGATGATATGTAATGGCCGAGTCTTTGATGTGCCGCCAGACTCTATATGCTGTGAGAGCAGCCGATAAGAAAAAAAACAAGCTCGCTTCGAGTTACCGATATGGTTAGTGTGGTGATGGACTTGGCTTCCTTGAGATTGTCTGCCCTGGAGGTTATAGAATAACGTTATGAATCGGATGGGAAAACCAATTCATAAGGATGTTGGAGTAACTTTGGGTACCTCGGGAGGGCCAGATTAGTGAATTTGGTAAATTGTATTCTTGCAGTGATAGTTGAAAATATTCAGTGTTTATTTGTAAACAATGAAACGTGGTGATTTCAGTAATGTATGAGCAGAACAGGACAAGTCAGCCTTTGGTTTTGGACTTCATGGG CAAAAAATCGAAAAAAAAAAAAAAGAAAAAACATCTTCTTCTTTCTCCTTACATCTCTGTTCTTTCAGAAATTCTCTCTCGTCTGTTCGTTCACCCCTGTCTTTTGATTTAAGGAACACCTCTTCTTTTTCCCCTTTTCCACTTCGATTCTCTTACGAATTCCCCTCCTTCACTAGAATCTCGATTTGTATTTTTGTTCAACGATTTGTTTGGTTTCTTTTGTTGTTTTTTTTTTTCTTTTTGTTCTTCGATTGGTGGCTTAGGGGTTTTAGATTTTTGGTTCTTACATGGGGTTGGGTAACGATGACGAAGCGGTGGCGGAAGATGGCGATTATGGCGACGGAGGATGTGGTGCCGGTTGTGGAAAGTCCTTTGGTTCTGTCCCGTGTTCGATCTGTCTCGATGTTGTTGACGATTCTGGAGATAGATCTTGGGCTAAGCTTCAATGTGGCCATCAATTTCATCTTGATTGCATTGGTTCGGCATTCAACATTAAAGGGGCAATGCAATGCCCCAATTGTCGGAAGATTGAAAAAGGTCAATGGCTTTATGCTAATGGCTGTAGGTCGTTTCCAGATTTTAGTATGGATGATTGGACCCACGAAGAGGATCTCTATGATCTAAGCTACTCAGAAATGGCCTTTGGAGTTCAATGGTGTCCGTTTGGCAACTTAGCTCGACTTCCTCCTTCATTTGAGGATGGCGACTTTTCGTCAACTGCTTATCATGACCTTTTGGGACAACATGCAGTTTTCGCCGAACATACCGCAGTATCTTCTGCAACTCATCCTTGTCCATATATTGCTTACTTTGGACCTATTCATCCCTCTTCATCAAGTTCAAGTGCTTCTGAAGCTTCGAATTTCAGTGGTCACTGGAATGGCCCCCCATCAGTACCCAGTGAAGTACCATCTTCCTATGCATTTCCTGCAGTGGATCTTCATTATCAAAATTGGGAGCATCACTCACTGCCCTTTTCCACAACACACAATCGTGTTGCTGGTGCTGATCAGCCGACGGTTGCATCCGTTGCCCAAAGATCTGCTACTAGAGTCAGTACTGAACTACCAAGATCCGGAATGCATCCTTTCCTTGTTGGTCATAGTTCCAGTGCAAGGGTTGGGAGTTCGGTTGCTTCCTCAATGATTCCTCCATATCCTGGCAGCAATGCACGTGCTCGTGACCGAGTTCAAGCTCTCCAAGCGTATTATCAACAACCTAGCACTACAGGAAGCATTCGCGCACCTGCAATATCTGGTGCCAGAAGATCAAGTAGTCACAGAGGGCTGTCACAAGCACCCATGGCCTCATCATCTGATCAACCCAATGGCTTCTATTTCTACTCATCAGCATCATCGGGTCGTAATTTCCAACTGGAAAACACTGTGCCAAATCGTTTTCACCCATGGGAAAGAGATCACTTGCCTTCTTTCGGTTTGAACCAGATGGAAAGAGATCCAGGTTGGGGAGAGATTCATCAGGGAGCCGCCAGTGTTTCTGATCCAAGCATCAGGTCCAGCAGCTTTCGTCAAAGGCATGGTCCCGAGAGGGCATCGTCACAAAATTGGTCATAGACCAACCATCATTTACTTACCGATTCCCGGTGAGGCTAAAACTATCACTATGATGACTTGAAACTGAAATTTATGTAATGATTGGGATGATATGTAATGGCCGAGTCTTTGATGTGCCGCCAGACTCTATATGCTGTGAGAGCAGCCGATAAGAAAAAAAACAAGCTCGCTTCGAGTTACCGATATGGTTAGTGTGGTGATGGACTTGGCTTCCTTGAGATTGTCTGCCCTGGAGGTTATAGAATAACGTTATGAATCGGATGGGAAAACCAATTCATAAGGATGTTGGAGTAACTTTGGGTACCTCGGGAGGGCCAGATTAGTGAATTTGGTAAATTGTATTCTTGCAGTGATAGTTGAAAATATTCAGTGTTTATTTGTAAACAATGAAACGTGGTGATTTCAGTAATGTATGAGCAGAACAGGACAAGTCAGCCTTTGGTTTTGGACTTCATGGG ATGGGGTTGGGTAACGATGACGAAGCGGTGGCGGAAGATGGCGATTATGGCGACGGAGGATGTGGTGCCGGTTGTGGAAAGTCCTTTGGTTCTGTCCCGTGTTCGATCTGTCTCGATGTTGTTGACGATTCTGGAGATAGATCTTGGGCTAAGCTTCAATGTGGCCATCAATTTCATCTTGATTGCATTGGTTCGGCATTCAACATTAAAGGGGCAATGCAATGCCCCAATTGTCGGAAGATTGAAAAAGGTCAATGGCTTTATGCTAATGGCTGTAGGTCGTTTCCAGATTTTAGTATGGATGATTGGACCCACGAAGAGGATCTCTATGATCTAAGCTACTCAGAAATGGCCTTTGGAGTTCAATGGTGTCCGTTTGGCAACTTAGCTCGACTTCCTCCTTCATTTGAGGATGGCGACTTTTCGTCAACTGCTTATCATGACCTTTTGGGACAACATGCAGTTTTCGCCGAACATACCGCAGTATCTTCTGCAACTCATCCTTGTCCATATATTGCTTACTTTGGACCTATTCATCCCTCTTCATCAAGTTCAAGTGCTTCTGAAGCTTCGAATTTCAGTGGTCACTGGAATGGCCCCCCATCAGTACCCAGTGAAGTACCATCTTCCTATGCATTTCCTGCAGTGGATCTTCATTATCAAAATTGGGAGCATCACTCACTGCCCTTTTCCACAACACACAATCGTGTTGCTGGTGCTGATCAGCCGACGGTTGCATCCGTTGCCCAAAGATCTGCTACTAGAGTCAGTACTGAACTACCAAGATCCGGAATGCATCCTTTCCTTGTTGGTCATAGTTCCAGTGCAAGGGTTGGGAGTTCGGTTGCTTCCTCAATGATTCCTCCATATCCTGGCAGCAATGCACGTGCTCGTGACCGAGTTCAAGCTCTCCAAGCGTATTATCAACAACCTAGCACTACAGGAAGCATTCGCGCACCTGCAATATCTGGTGCCAGAAGATCAAGTAGTCACAGAGGGCTGTCACAAGCACCCATGGCCTCATCATCTGATCAACCCAATGGCTTCTATTTCTACTCATCAGCATCATCGGGTCGTAATTTCCAACTGGAAAACACTGTGCCAAATCGTTTTCACCCATGGGAAAGAGATCACTTGCCTTCTTTCGGTTTGAACCAGATGGAAAGAGATCCAGGTTGGGGAGAGATTCATCAGGGAGCCGCCAGTGTTTCTGATCCAAGCATCAGGTCCAGCAGCTTTCGTCAAAGGCATGGTCCCGAGAGGGCATCGTCACAAAATTGGTCATAG MGLGNDDEAVAEDGDYGDGGCGAGCGKSFGSVPCSICLDVVDDSGDRSWAKLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYANGCRSFPDFSMDDWTHEEDLYDLSYSEMAFGVQWCPFGNLARLPPSFEDGDFSSTAYHDLLGQHAVFAEHTAVSSATHPCPYIAYFGPIHPSSSSSSASEASNFSGHWNGPPSVPSEVPSSYAFPAVDLHYQNWEHHSLPFSTTHNRVAGADQPTVASVAQRSATRVSTELPRSGMHPFLVGHSSSARVGSSVASSMIPPYPGSNARARDRVQALQAYYQQPSTTGSIRAPAISGARRSSSHRGLSQAPMASSSDQPNGFYFYSSASSGRNFQLENTVPNRFHPWERDHLPSFGLNQMERDPGWGEIHQGAASVSDPSIRSSSFRQRHGPERASSQNWS Homology
BLAST of CmaCh11G011480 vs. ExPASy Swiss-Prot
Match: O82239 (E3 ubiquitin-protein ligase RFI2 OS=Arabidopsis thaliana OX=3702 GN=RFI2 PE=1 SV=2) HSP 1 Score: 211.8 bits (538), Expect = 1.5e-53 Identity = 151/373 (40.48%), Postives = 191/373 (51.21%), Query Frame = 0
BLAST of CmaCh11G011480 vs. ExPASy Swiss-Prot
Match: Q9BWF2 (E3 ubiquitin-protein ligase TRAIP OS=Homo sapiens OX=9606 GN=TRAIP PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 2.2e-04 Identity = 28/81 (34.57%), Postives = 40/81 (49.38%), Query Frame = 0
BLAST of CmaCh11G011480 vs. ExPASy Swiss-Prot
Match: Q8VIG6 (E3 ubiquitin-protein ligase TRAIP OS=Mus musculus OX=10090 GN=Traip PE=1 SV=2) HSP 1 Score: 48.5 bits (114), Expect = 2.2e-04 Identity = 28/81 (34.57%), Postives = 40/81 (49.38%), Query Frame = 0
BLAST of CmaCh11G011480 vs. TAIR 10
Match: AT3G05545.1 (RING/U-box superfamily protein ) HSP 1 Score: 373.2 bits (957), Expect = 2.7e-103 Identity = 226/464 (48.71%), Postives = 271/464 (58.41%), Query Frame = 0
BLAST of CmaCh11G011480 vs. TAIR 10
Match: AT2G47700.1 (RING/U-box superfamily protein ) HSP 1 Score: 211.8 bits (538), Expect = 1.0e-54 Identity = 151/373 (40.48%), Postives = 191/373 (51.21%), Query Frame = 0
BLAST of CmaCh11G011480 vs. TAIR 10
Match: AT2G15260.1 (RING/U-box superfamily protein ) HSP 1 Score: 92.8 bits (229), Expect = 7.1e-19 Identity = 45/104 (43.27%), Postives = 62/104 (59.62%), Query Frame = 0
BLAST of CmaCh11G011480 vs. TAIR 10
Match: AT4G13490.1 (RING/U-box superfamily protein ) HSP 1 Score: 86.3 bits (212), Expect = 6.6e-17 Identity = 33/62 (53.23%), Postives = 49/62 (79.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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