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CmaCh11G011400 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTATTTAGAGTAAGGGAGATGGTGATTCCTCCTCCAGTTAGGCCACCAAGATTAACGCAGTATCTAAAGCCATATGTCTTGAAGATGCACTTCACAAACAAGTATGTGAGCGCGCAGGTGATCCACTCCGAAACGGCCACCATTGCTTCGGCTGCAAGCTCGCAGGAGAAGGCACTGCGGCCGAGCATGGAGTCAACAAGGGATGTGGCTGCTGCTGTAAAGATCGGGAAATTGTTGGGAGAGAGGCTTTTGCTTAAGGGAATCCCAGCTGTTTGTGTGCACTTGAAAAGAGAACAGAAGTATCATGGTAAGATCAAAGCTGTTATTGATTCTGTGAGGGAAGCAGGTATTAAGCTGCTTTGA ATGTTATTTAGAGTAAGGGAGATGGTGATTCCTCCTCCAGTTAGGCCACCAAGATTAACGCAGTATCTAAAGCCATATGTCTTGAAGATGCACTTCACAAACAAGTATGTGAGCGCGCAGGTGATCCACTCCGAAACGGCCACCATTGCTTCGGCTGCAAGCTCGCAGGAGAAGGCACTGCGGCCGAGCATGGAGTCAACAAGGGATGTGGCTGCTGCTGTAAAGATCGGGAAATTGTTGGGAGAGAGGCTTTTGCTTAAGGGAATCCCAGCTGTTTGTGTGCACTTGAAAAGAGAACAGAAGTATCATGGTAAGATCAAAGCTGTTATTGATTCTGTGAGGGAAGCAGGTATTAAGCTGCTTTGA ATGTTATTTAGAGTAAGGGAGATGGTGATTCCTCCTCCAGTTAGGCCACCAAGATTAACGCAGTATCTAAAGCCATATGTCTTGAAGATGCACTTCACAAACAAGTATGTGAGCGCGCAGGTGATCCACTCCGAAACGGCCACCATTGCTTCGGCTGCAAGCTCGCAGGAGAAGGCACTGCGGCCGAGCATGGAGTCAACAAGGGATGTGGCTGCTGCTGTAAAGATCGGGAAATTGTTGGGAGAGAGGCTTTTGCTTAAGGGAATCCCAGCTGTTTGTGTGCACTTGAAAAGAGAACAGAAGTATCATGGTAAGATCAAAGCTGTTATTGATTCTGTGAGGGAAGCAGGTATTAAGCTGCTTTGA MLFRVREMVIPPPVRPPRLTQYLKPYVLKMHFTNKYVSAQVIHSETATIASAASSQEKALRPSMESTRDVAAAVKIGKLLGERLLLKGIPAVCVHLKREQKYHGKIKAVIDSVREAGIKLL Homology
BLAST of CmaCh11G011400 vs. ExPASy Swiss-Prot
Match: B6EPU1 (50S ribosomal protein L18 OS=Aliivibrio salmonicida (strain LFI1238) OX=316275 GN=rplR PE=3 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.2e-10 Identity = 41/92 (44.57%), Postives = 58/92 (63.04%), Query Frame = 0
BLAST of CmaCh11G011400 vs. ExPASy Swiss-Prot
Match: P52863 (50S ribosomal protein L18 OS=Vibrio proteolyticus OX=671 GN=rplR PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.7e-10 Identity = 39/92 (42.39%), Postives = 59/92 (64.13%), Query Frame = 0
BLAST of CmaCh11G011400 vs. ExPASy Swiss-Prot
Match: B7VLE1 (50S ribosomal protein L18 OS=Vibrio atlanticus (strain LGP32) OX=575788 GN=rplR PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 6.3e-10 Identity = 38/92 (41.30%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of CmaCh11G011400 vs. ExPASy Swiss-Prot
Match: A8IAP8 (50S ribosomal protein L18 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) OX=438753 GN=rplR PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 8.2e-10 Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = 0
BLAST of CmaCh11G011400 vs. ExPASy Swiss-Prot
Match: A7MWH4 (50S ribosomal protein L18 OS=Vibrio campbellii (strain ATCC BAA-1116 / BB120) OX=338187 GN=rplR PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 8.2e-10 Identity = 39/92 (42.39%), Postives = 59/92 (64.13%), Query Frame = 0
BLAST of CmaCh11G011400 vs. TAIR 10
Match: AT5G27820.1 (Ribosomal L18p/L5e family protein ) HSP 1 Score: 174.1 bits (440), Expect = 6.8e-44 Identity = 89/114 (78.07%), Postives = 102/114 (89.47%), Query Frame = 0
BLAST of CmaCh11G011400 vs. TAIR 10
Match: AT3G20230.1 (Ribosomal L18p/L5e family protein ) HSP 1 Score: 62.4 bits (150), Expect = 2.9e-10 Identity = 32/101 (31.68%), Postives = 61/101 (60.40%), Query Frame = 0
BLAST of CmaCh11G011400 vs. TAIR 10
Match: AT1G08845.1 (Ribosomal L18p/L5e family protein ) HSP 1 Score: 52.4 bits (124), Expect = 3.0e-07 Identity = 28/101 (27.72%), Postives = 53/101 (52.48%), Query Frame = 0
BLAST of CmaCh11G011400 vs. TAIR 10
Match: AT1G08845.2 (Ribosomal L18p/L5e family protein ) HSP 1 Score: 52.4 bits (124), Expect = 3.0e-07 Identity = 28/101 (27.72%), Postives = 53/101 (52.48%), Query Frame = 0
BLAST of CmaCh11G011400 vs. TAIR 10
Match: AT3G45020.1 (Ribosomal L18p/L5e family protein ) HSP 1 Score: 45.8 bits (107), Expect = 2.8e-05 Identity = 34/111 (30.63%), Postives = 61/111 (54.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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