
CmaCh11G011370 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAGCTTCCAGTTTCCACCATGGCCGTCCGTTTCGACCGACTCTCAACCTGCGTTCTTCTCCCCTATAAATTCCCTTTCTTCTCCTCTTCCTCTTCCATCCATTGAACCGCTAAGCATTTCGATTTCCCTACAAAATCAATCATCAAATCGCATCTTTCTTCCGTTTTCCATCTCAAGCTCCTCTGAATTTCCCCCCACGTTTTTCCGCTATGGCTGATTCCAATCCTTCGTCGCAGCACCATGAAATGGTACGATTCTCTCATCACTCGAATTTCTTGTGGTTTGTATTATTGATTTAATTGGATTTGTCGATTTTGTGCGAAATTTCTGTTTTCTGAGATTGTGAGGATTGATTGATTGGATTTTGTGTAGGCGGCTAGGGCAGAGGAGGAGAGGTTGAAGTATTTGGAGTTTGTTCAAACGGCGGCGTTTCGAGCGTCGGAGTGTTTCTTCAACGCTTATGGCTATGCGAAGAACCGGATTGGTCCACTGAGGCCCGGCGTTGAGACTGTGGAGGGCACTGTGAAGTCTGTTGTCGGTCCTTTGTACAATAAGTTCCACGGCGTTCCGATTGAGGTTCTTAAGTTCGTCGATCGCAAGGTTGGTTTTCTTTCTTCTATTACTGTTCTATGCATGTTCTTCATATAATTTCTCTTCGGTTCCTTCTCGGATTGATTTATCAGTTGCCTTCGGTTAATTATCAATTTCAGCCTATGGATTAAAACTTCTCAATTAAGTAATTCTATGGAAAGTCCAATGACTTTTTGTGGAGATTAAATTGCTAATATACTGTAGACTTCTCGTTTTGGTCCTTGAACTCTGTTTACTTTCCCTTAGCATGGTTTCAAGTATCTTTGTTGAATATGGACATGTAACATGTATAAGGCTGAGTATTATTTGAGTTTATGCTAGAAGGATGGAAACGAGTGTTTTCTAAAAAAGTTCAAGGATCAAATGAAGTTTATACCAATTTTGTATTAGAAATATCAGAATGGAATCCAAATCAGTTTGTTCATACAAAGTTGATATGTTAGGTAGCATTTTGTGTGCATTTCAAATTCTAATGGATGAGAATTTACAGGATTGAGGTTGAGATCAGCAAAAATGATTTTGTATAGTTAGTTCTTCACTTTGGAATGATGCAAAAAACCAAAAAAGTTGAATGCTAAAACACTGAGAAACTTATTTTCTTTGATTGTTGATGTATAGGTTGACGAGTCGGTGACCAAGATCGATCGGCATGTACCCCCAACCATCAAGCAAGCCTCATCACAGGCCATGTCTGCTGCACAGCAAGCGCCTGAAATTGCCCGAAATGTAGCGATGGAGGTCAGACACACTGGCCTTAAAGACTCTGTCTCTGGCATTGTGAAATCTGTGTATGCCAAATACGAGCCAACTGCTAAGCAACTCTACTCCAAATACGAGCCCAAGGCCGAGCAATGCGCAGCTTCGGCATGGCACAGACTCAACCAGCTCCCTGTTTTCCCCACTGTCGCACAAGCTATCTTGCCAACTGCAGTGTACTGCACCGAGAAATACAATGAGACCGTGCAAAGCACCTCCAAGAAGGGCTACAAGGTCTCTTCGTACCTTCCGTTGGTCCCTACTGAGAGGATTGCCAAAGTGTTCAGCAAGGACAGAATTGAGATGGAGCCCTTGGTGAATTGAGAGCCCTTGGATTTCCTGGTTTCGAAATAACACATTATGAATGTTTTTGTTGAATGGAGGCACACTTATATGTTGGTGTTGTCATCTCTCTGAGCCTTGTGTTGTTTTGGCTTCAGATATAGCTATGGCTTTTATGTTTGTTCTTTGATGAGAGATATTAGTTACACAGGTTTGATATTATATTTGAAGGCTTAATTAATTCTTATAGTCTTTGTTTGAGATTTACTTTCTTCCTACTTAGGTATAACATCTAAGGAGGTGATTGGAGACGCGTTTTAAAATCATGAGGCTAACAATGATATGTAACCGGTCAAAGCAGATAATAACAGACTGTTTAGTTCAGATAAAAAATGAAAATAGAGATAAGTGTTATCTTCTTCAAGGGACGACTTTAGATTTACAAATATAG TAAGCTTCCAGTTTCCACCATGGCCGTCCGTTTCGACCGACTCTCAACCTGCGTTCTTCTCCCCTATAAATTCCCTTTCTTCTCCTCTTCCTCTTCCATCCATTGAACCGCTAAGCATTTCGATTTCCCTACAAAATCAATCATCAAATCGCATCTTTCTTCCGTTTTCCATCTCAAGCTCCTCTGAATTTCCCCCCACGTTTTTCCGCTATGGCTGATTCCAATCCTTCGTCGCAGCACCATGAAATGGCGGCTAGGGCAGAGGAGGAGAGGTTGAAGTATTTGGAGTTTGTTCAAACGGCGGCGTTTCGAGCGTCGGAGTGTTTCTTCAACGCTTATGGCTATGCGAAGAACCGGATTGGTCCACTGAGGCCCGGCGTTGAGACTGTGGAGGGCACTGTGAAGTCTGTTGTCGGTCCTTTGTACAATAAGTTCCACGGCGTTCCGATTGAGGTTCTTAAGTTCGTCGATCGCAAGGTTGACGAGTCGGTGACCAAGATCGATCGGCATGTACCCCCAACCATCAAGCAAGCCTCATCACAGGCCATGTCTGCTGCACAGCAAGCGCCTGAAATTGCCCGAAATGTAGCGATGGAGGTCAGACACACTGGCCTTAAAGACTCTGTCTCTGGCATTGTGAAATCTGTGTATGCCAAATACGAGCCAACTGCTAAGCAACTCTACTCCAAATACGAGCCCAAGGCCGAGCAATGCGCAGCTTCGGCATGGCACAGACTCAACCAGCTCCCTGTTTTCCCCACTGTCGCACAAGCTATCTTGCCAACTGCAGTGTACTGCACCGAGAAATACAATGAGACCGTGCAAAGCACCTCCAAGAAGGGCTACAAGGTCTCTTCGTACCTTCCGTTGGTCCCTACTGAGAGGATTGCCAAAGTGTTCAGCAAGGACAGAATTGAGATGGAGCCCTTGGTGAATTGAGAGCCCTTGGATTTCCTGGTTTCGAAATAACACATTATGAATGTTTTTGTTGAATGGAGGCACACTTATATGTTGGTGTTGTCATCTCTCTGAGCCTTGTGTTGTTTTGGCTTCAGATATAGCTATGGCTTTTATGTTTGTTCTTTGATGAGAGATATTAGTTACACAGGTTTGATATTATATTTGAAGGCTTAATTAATTCTTATAGTCTTTGTTTGAGATTTACTTTCTTCCTACTTAGGTATAACATCTAAGGAGGTGATTGGAGACGCGTTTTAAAATCATGAGGCTAACAATGATATGTAACCGGTCAAAGCAGATAATAACAGACTGTTTAGTTCAGATAAAAAATGAAAATAGAGATAAGTGTTATCTTCTTCAAGGGACGACTTTAGATTTACAAATATAG ATGGCTGATTCCAATCCTTCGTCGCAGCACCATGAAATGGCGGCTAGGGCAGAGGAGGAGAGGTTGAAGTATTTGGAGTTTGTTCAAACGGCGGCGTTTCGAGCGTCGGAGTGTTTCTTCAACGCTTATGGCTATGCGAAGAACCGGATTGGTCCACTGAGGCCCGGCGTTGAGACTGTGGAGGGCACTGTGAAGTCTGTTGTCGGTCCTTTGTACAATAAGTTCCACGGCGTTCCGATTGAGGTTCTTAAGTTCGTCGATCGCAAGGTTGACGAGTCGGTGACCAAGATCGATCGGCATGTACCCCCAACCATCAAGCAAGCCTCATCACAGGCCATGTCTGCTGCACAGCAAGCGCCTGAAATTGCCCGAAATGTAGCGATGGAGGTCAGACACACTGGCCTTAAAGACTCTGTCTCTGGCATTGTGAAATCTGTGTATGCCAAATACGAGCCAACTGCTAAGCAACTCTACTCCAAATACGAGCCCAAGGCCGAGCAATGCGCAGCTTCGGCATGGCACAGACTCAACCAGCTCCCTGTTTTCCCCACTGTCGCACAAGCTATCTTGCCAACTGCAGTGTACTGCACCGAGAAATACAATGAGACCGTGCAAAGCACCTCCAAGAAGGGCTACAAGGTCTCTTCGTACCTTCCGTTGGTCCCTACTGAGAGGATTGCCAAAGTGTTCAGCAAGGACAGAATTGAGATGGAGCCCTTGGTGAATTGA MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRASECFFNAYGYAKNRIGPLRPGVETVEGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVAMEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPLVN Homology
BLAST of CmaCh11G011370 vs. ExPASy Swiss-Prot
Match: Q9MA63 (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=1 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 1.6e-76 Identity = 140/240 (58.33%), Postives = 187/240 (77.92%), Query Frame = 0
BLAST of CmaCh11G011370 vs. ExPASy Swiss-Prot
Match: Q9SW70 (Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 2.7e-68 Identity = 131/230 (56.96%), Postives = 171/230 (74.35%), Query Frame = 0
BLAST of CmaCh11G011370 vs. ExPASy Swiss-Prot
Match: A2Y0H2 (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_017815 PE=3 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 4.3e-58 Identity = 116/219 (52.97%), Postives = 155/219 (70.78%), Query Frame = 0
BLAST of CmaCh11G011370 vs. ExPASy Swiss-Prot
Match: Q9FRA7 (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0151300 PE=2 SV=2) HSP 1 Score: 226.1 bits (575), Expect = 4.3e-58 Identity = 116/219 (52.97%), Postives = 155/219 (70.78%), Query Frame = 0
BLAST of CmaCh11G011370 vs. ExPASy Swiss-Prot
Match: O82803 (Small rubber particle protein OS=Hevea brasiliensis OX=3981 GN=SRPP PE=1 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 2.3e-51 Identity = 110/221 (49.77%), Postives = 145/221 (65.61%), Query Frame = 0
BLAST of CmaCh11G011370 vs. TAIR 10
Match: AT3G05500.1 (Rubber elongation factor protein (REF) ) HSP 1 Score: 287.3 bits (734), Expect = 1.1e-77 Identity = 140/240 (58.33%), Postives = 187/240 (77.92%), Query Frame = 0
BLAST of CmaCh11G011370 vs. TAIR 10
Match: AT2G47780.1 (Rubber elongation factor protein (REF) ) HSP 1 Score: 176.4 bits (446), Expect = 2.8e-44 Identity = 93/217 (42.86%), Postives = 133/217 (61.29%), Query Frame = 0
BLAST of CmaCh11G011370 vs. TAIR 10
Match: AT1G67360.2 (Rubber elongation factor protein (REF) ) HSP 1 Score: 117.1 bits (292), Expect = 2.0e-26 Identity = 75/217 (34.56%), Postives = 104/217 (47.93%), Query Frame = 0
BLAST of CmaCh11G011370 vs. TAIR 10
Match: AT1G67360.1 (Rubber elongation factor protein (REF) ) HSP 1 Score: 117.1 bits (292), Expect = 2.0e-26 Identity = 75/217 (34.56%), Postives = 104/217 (47.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|