Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGAGAACCGTATGTTTCACTTTGTTCTTTCCGTGTGATCTCTTTTTATTCAAATCGAAAAGTTAGTTCTGTGGTGGTATATATATAATGTTTCATATGGTCTATACTATCTTCGAGAAGATTTCTTGTTTTCGAGTTTGTGCATATTTCAAATTTCGTTTCATTCTGTAATGTTGCATGTTTTTGTTGAAAACATTGCCTTTCAAGTGCATTTGGAGTATATATTATCATCAATCATACATGCAGCTTACACTTTCCATTTGAGTTGGAACTTTAATAAACTCTAATTTTTTTGTTTCAACTTCCATTGAATATTTTGAAGGGGTGTTTGGATAATACGTCAGGTTCGTATAGCCAAAACCGAGTTTATGTTTGGCAGTATATTTGGTCTGTACGGACTGTAGTTGAGAAGTCGTGTTTGTATTTGGTATATGTGTTTGCATATCTTAGACTACGAATCTCAAAAATCCTTTCTTAGGCTACAAGCTACCTTTTACGATCACAAACCCACGAATCAAGTACAAACTGAAAATATTCGAACGTAGATCATCCCGACTTGAGCTTCTCGACTCTAGGCTACACAAATTCAATCGTTTCAAACTCATGAACCAAACACCTTCATTGTTAGATTTAAGATTTTTGTTTGGCCTATACTCACACCATTTCCTGTCACTTGTTGCAGACGGAGTCTCCTCCGAGCAAGCTCATGTCGATGCCAAACCACACACACACACAACAATCTGATCGGAGAATTTACACCGAAGATTTGATCTGAAGCCCTTCATAATACTTCCTGTAGATATTTTGCTTGACAAGAGTAGATATCTTGATTGAGCTATAAAAAGTTTCTCCTCGTTTTCTATTTATGCTTTACTATTCTATGCATTGTTGGTAATGACGGTAAAAAATGTGTAACTTTATATCATACCTGAAAATATTTGATGCTTTTCTTCTCACATTCCCATATAAAGAAACTGTAGTTTCCTTATTCTGTTTAGTTGAACTTAATGTTATAAAACAACTTATCTATCTATCTGTCTGATTAAGATTGTTTGGAGTGTGTATGTGAATAACAACTTTAATAACTCACCCAACCATAGCTGCACAAAGTAGCTTTTGAAGACCTTCAAAATTTCGTGTAAATATTCCATGGCGACATTTTCGGTTGACGAGTACCCGAAGACAATTGGAATCAAAATTTGAAATCTCTTTGTTATATTCATAATCATCATCTCATATCAGGAAAATTTTAAGTGCAGAAGACTTCTAAGATTGAATTTTCTTTTTCATTGTTTTTCTGCTCTGTTTTTGGGACAAAGTTCAGAACAGTTTTATGTTGGCCAAAACTCCATCATATGAATACGTTGGTTGAATATCTGGTTAAAAGCATGACGTATTGGAGAAAAAAAGAATGCTTACTTATATAAACCCGAGCAAGTCATGGAAGTTTTGGCTTTGTGAGCGAGCTCGGAAAGTGGAGAGCTCATAGGAAGGTAACTACGATATAGGGCCTAGAACCTTGTAGGGTCTTTCTAAACATCTTAAATCCTTTAATAGCATTTCTTTTATCGATAGTAGTTTTTCATTCGTTTGCACGTATCATTCTGTTGCACTTAGGGATATCATGTTATTATTTTTGGTGGAATGCAGCTAAAAGTCTATTTGGAAATGAGGAAGATCATGAGCTTAGAAGACAATATCTCGAACTTGTAAGGCACTTTATTTCTTTTTTATTTATACGATAGCAAAAGACTTTTAAGTAGTACCTATGGATTCAACGTATATTCATTCCTCTCAAAATATAAACATAGATTCGTTTCTTTAATTGTTGCCGAACATTATAGACCATACATTTTTTAGAAAACTTTTCGACAAAACAAATTTTCCACAACTTAGAATGTGTCACAGTATCGACCACATGCACTATTTGAAACATTCATGGCTGAGGATTAAACACTCAGTTTCATGATAATACAACTAATGCTATAAGGATTGGGTTGTGATTATGGCTACATTGTAGCAGACATTGAAAGAGAAGGGTGAGGTCATCAACTTCTTGTTTGTGGTTAAGAATGAAGAACAAATGAGTGCTGATTGTTGTTTCTAATTTTGTCCTATGACATTTTCTGACAATGGCATCCGACAGGAGAAGCCAACTAACTCCATTAATGTGTAATTACTTCATTAGCTAACAGACATTCCTTTTGTCTAGAACTCTGTAATGAAGCATTTAATGTTTTTTTTTCACTTTTTGGATGAAGAATGACCCTTTTGGTTATGAAAAGTCCTATTTAAGGAGATGTGTACAATTCATCTGACCATAGCAGAAACAAAAATCACAAAAAGAGAAAACAGAACACTTTCTGCTGTTCTTCTGAAACTTTAAGGAAAAACTAGAGTTCAGAATTGCTACCATTGTTCCTGTTGAGATGACAGAAGGAAGGAGGAATCTCAATAGGGAAATCCCGACGTGTGGATCCGTGATCGGCGGGAAGCGGAACAAGTGTGTCATTTTTCCAGTCAAATCAAGCATGGTTGCTGAGTCTATGGATAGAAGTAACAAGAACTGGTAAACTCCTGATACACTAACATATACCTCTCCTCTCTTTGAGCACTTCTCAACTTAAAATCTTCTCAATGAAGGATTGTTCAGACAAAACCAGCATACGAAAGCGACTTAATTGTTCGAGTTGGGGACTTCAGCTTTTACTTGCACAAGGTACTGTTTTTTTTCATCATGTCATTGAAGTTTTCAGTTTTATGTATCAGTTTTAGCTATTTCAATACGAATCTTTAAGAGATGCAGCCTTTTTGAGTTCATCGATTCAAGTTCGATTCATGTTCTTCATTAATCCCTGTTTTTCAAGTATTGTTATCCTATGTCGTCTATTTTCGATTTGAAACGTGGACGGTTTATCTTATATAAAATTTGAAATTCTTGAGTTGGACTGTGATGGATGTTTTCAGCTCCCAATGGTAGCAAGAAGCAAATACCTGAATAGAATGATAATCCAAAACAGTAGCCATGAAGTGCAAAAGAACAACAGTGTGAGTACCATAGAACTTGACAATCTTCCAGGTGGGGCTATGGCTTTTGAGTTGGTGATGAAATTCTGCTATGGATGGAAGGTTGATTTAACTGCTAAAAATGTTGCTCCTCTTTACTGTGCTGCACATTTCCTAGAAATGACTGATGATCTTAAACAAGGGAATTTAACTTCCAAAGCAGAAGCCTTCATGAGCTTTGTAATATCATCATCATGGAATGATACATTCAAAGTTCTCAAAAGTTGTGAATCCATTTCTCGATGCGCCAATCGGCTTCACATCCCGAAATGCTGTTCTGAAGCAATTGCTCTTAAGGCTTGTATGAATCCAGAGGCGTTCTGTAACAATGACTATAATGTTGATAATGTAAAGCTCGAAGTTGTTGCCGACAACTGGTGGTTTGCGGATGTTTCAGTTCTTAGGATAGATCATTTCATTGAAGTGATTGAATCGGGTAAACGAAGAGGAATGAGGTCTGAGGTCATAGGATCTTGTATAGCTCATTGGACAATGAGATGGTTTTCTTCTGCAATGAACGGACTCGAGAATTCGACGTTGCAGCATCTCAACAAGTTGAGATCAGTTACAGTTGAAAGTTTGATTCGGATACTTCCGTTCGAGGAAAACTCGGTTACCTCTAGTTTTCTGCTTCATATTTTGAAGCTGGGATCTGTAATGAAGATTGACTCTGAATTGTTAACCATACTAGAAAATAGATTGGCCACGATGTTGGAAAAATGTGACGCTTCGGATTTACTTGTCAAGAACTATGGAGAAGACGACAGTGTTTACGACGTTGCCATTGTTACTCGGGTGGTGAAGTCTTATGCTGCTCACATATCAGATAACTCTCAATCCAATCTACTAGTTGTTGGTCGATTGGTGGACGATTATCTTATGCTTGTTGCACGAGATCAAAACCTCAGGGCAGATTGTTTCCAAGTCCTTGTCGAGGCATTACCGCAAAATGCTCGGGTTTGTTTCGACAATCTGTATCGAGCAATTGATATGTACCTGAAGGTAAGGAACTTTCATTTATATCTCATTTGGGAAATGCAAAGTTTCAAACTTGAATGATGAAAGAAGTCTTGGTTTTTGCAGGCACATCCTGAGTTAACAGAAGTAGAAAGGACGTGTCTAGGTAGCTCATTGAAATACCATAAATTGTCACAAGCAGCAAGGGAGCACATAATGAGAAACGATCGGTTACCACTGAAATACACGACGAGTTTTATTCTTTTGGAACAAGTCATGACGAGGGCTCGAGCCGAATTTGGAATGAGTAATGGTCAAACGAAAAGCCGAGTTGTGATGGGTGAAAGTAGGGGAGGATCGAGTTGGATGATGAGTTCACAGAAGGAGATAAGTATGATGAAAAGGGAGGTTGAGACAATGAAAGGGCAGCTCAATGATATTCAGATGTGCAAGACAAAGCTTGAAGGTCAAGTAAAGAAAGGTTTCAATTACAAGAAAAACTTTGCCAGTGTGCGGAAAATCGTCTGTTTAGGGTTCAATAGTGCTAAGATGAACATTGGCTTTGCTTCATTGTCAACTTGAACAAATCTGCTG
mRNA sequence
ATGAAGGAGAACCCTAAAAGTCTATTTGGAAATGAGGAAGATCATGAGCTTAGAAGACAATATCTCGAACTTGAAAAACTAGAGTTCAGAATTGCTACCATTGTTCCTGTTGAGATGACAGAAGGAAGGAGGAATCTCAATAGGGAAATCCCGACGTGTGGATCCGTGATCGGCGGGAAGCGGAACAAGTGTGTCATTTTTCCAGTCAAATCAAGCATGGTTGCTGAGTCTATGGATAGAAGTAACAAGAACTGGATTGTTCAGACAAAACCAGCATACGAAAGCGACTTAATTGTTCGAGTTGGGGACTTCAGCTTTTACTTGCACAAGCTCCCAATGGTAGCAAGAAGCAAATACCTGAATAGAATGATAATCCAAAACAGTAGCCATGAAGTGCAAAAGAACAACAGTGTGAGTACCATAGAACTTGACAATCTTCCAGGTGGGGCTATGGCTTTTGAGTTGGTGATGAAATTCTGCTATGGATGGAAGGTTGATTTAACTGCTAAAAATGTTGCTCCTCTTTACTGTGCTGCACATTTCCTAGAAATGACTGATGATCTTAAACAAGGGAATTTAACTTCCAAAGCAGAAGCCTTCATGAGCTTTGTAATATCATCATCATGGAATGATACATTCAAAGTTCTCAAAAGTTGTGAATCCATTTCTCGATGCGCCAATCGGCTTCACATCCCGAAATGCTGTTCTGAAGCAATTGCTCTTAAGGCTTGTATGAATCCAGAGGCGTTCTGTAACAATGACTATAATGTTGATAATGTAAAGCTCGAAGTTGTTGCCGACAACTGGTGGTTTGCGGATGTTTCAGTTCTTAGGATAGATCATTTCATTGAAGTGATTGAATCGGGTAAACGAAGAGGAATGAGGTCTGAGGTCATAGGATCTTGTATAGCTCATTGGACAATGAGATGGTTTTCTTCTGCAATGAACGGACTCGAGAATTCGACGTTGCAGCATCTCAACAAGTTGAGATCAGTTACAGTTGAAAGTTTGATTCGGATACTTCCGTTCGAGGAAAACTCGGTTACCTCTAGTTTTCTGCTTCATATTTTGAAGCTGGGATCTGTAATGAAGATTGACTCTGAATTGTTAACCATACTAGAAAATAGATTGGCCACGATGTTGGAAAAATGTGACGCTTCGGATTTACTTGTCAAGAACTATGGAGAAGACGACAGTGTTTACGACGTTGCCATTGTTACTCGGGTGGTGAAGTCTTATGCTGCTCACATATCAGATAACTCTCAATCCAATCTACTAGTTGTTGGTCGATTGGTGGACGATTATCTTATGCTTGTTGCACGAGATCAAAACCTCAGGGCAGATTGTTTCCAAGTCCTTGTCGAGGCATTACCGCAAAATGCTCGGGTTTGTTTCGACAATCTGTATCGAGCAATTGATATGTACCTGAAGGCACATCCTGAGTTAACAGAAGTAGAAAGGACGTGTCTAGGTAGCTCATTGAAATACCATAAATTGTCACAAGCAGCAAGGGAGCACATAATGAGAAACGATCGGTTACCACTGAAATACACGACGAGTTTTATTCTTTTGGAACAAGTCATGACGAGGGCTCGAGCCGAATTTGGAATGAGTAATGGTCAAACGAAAAGCCGAGTTGTGATGGGTGAAAGTAGGGGAGGATCGAGTTGGATGATGAGTTCACAGAAGGAGATAAGTATGATGAAAAGGGAGGTTGAGACAATGAAAGGGCAGCTCAATGATATTCAGATGTGCAAGACAAAGCTTGAAGGTCAAGTAAAGAAAGGTTTCAATTACAAGAAAAACTTTGCCAGTGTGCGGAAAATCGTCTGTTTAGGGTTCAATAGTGCTAAGATGAACATTGGCTTTGCTTCATTGTCAACTTGAACAAATCTGCTG
Coding sequence (CDS)
ATGAAGGAGAACCCTAAAAGTCTATTTGGAAATGAGGAAGATCATGAGCTTAGAAGACAATATCTCGAACTTGAAAAACTAGAGTTCAGAATTGCTACCATTGTTCCTGTTGAGATGACAGAAGGAAGGAGGAATCTCAATAGGGAAATCCCGACGTGTGGATCCGTGATCGGCGGGAAGCGGAACAAGTGTGTCATTTTTCCAGTCAAATCAAGCATGGTTGCTGAGTCTATGGATAGAAGTAACAAGAACTGGATTGTTCAGACAAAACCAGCATACGAAAGCGACTTAATTGTTCGAGTTGGGGACTTCAGCTTTTACTTGCACAAGCTCCCAATGGTAGCAAGAAGCAAATACCTGAATAGAATGATAATCCAAAACAGTAGCCATGAAGTGCAAAAGAACAACAGTGTGAGTACCATAGAACTTGACAATCTTCCAGGTGGGGCTATGGCTTTTGAGTTGGTGATGAAATTCTGCTATGGATGGAAGGTTGATTTAACTGCTAAAAATGTTGCTCCTCTTTACTGTGCTGCACATTTCCTAGAAATGACTGATGATCTTAAACAAGGGAATTTAACTTCCAAAGCAGAAGCCTTCATGAGCTTTGTAATATCATCATCATGGAATGATACATTCAAAGTTCTCAAAAGTTGTGAATCCATTTCTCGATGCGCCAATCGGCTTCACATCCCGAAATGCTGTTCTGAAGCAATTGCTCTTAAGGCTTGTATGAATCCAGAGGCGTTCTGTAACAATGACTATAATGTTGATAATGTAAAGCTCGAAGTTGTTGCCGACAACTGGTGGTTTGCGGATGTTTCAGTTCTTAGGATAGATCATTTCATTGAAGTGATTGAATCGGGTAAACGAAGAGGAATGAGGTCTGAGGTCATAGGATCTTGTATAGCTCATTGGACAATGAGATGGTTTTCTTCTGCAATGAACGGACTCGAGAATTCGACGTTGCAGCATCTCAACAAGTTGAGATCAGTTACAGTTGAAAGTTTGATTCGGATACTTCCGTTCGAGGAAAACTCGGTTACCTCTAGTTTTCTGCTTCATATTTTGAAGCTGGGATCTGTAATGAAGATTGACTCTGAATTGTTAACCATACTAGAAAATAGATTGGCCACGATGTTGGAAAAATGTGACGCTTCGGATTTACTTGTCAAGAACTATGGAGAAGACGACAGTGTTTACGACGTTGCCATTGTTACTCGGGTGGTGAAGTCTTATGCTGCTCACATATCAGATAACTCTCAATCCAATCTACTAGTTGTTGGTCGATTGGTGGACGATTATCTTATGCTTGTTGCACGAGATCAAAACCTCAGGGCAGATTGTTTCCAAGTCCTTGTCGAGGCATTACCGCAAAATGCTCGGGTTTGTTTCGACAATCTGTATCGAGCAATTGATATGTACCTGAAGGCACATCCTGAGTTAACAGAAGTAGAAAGGACGTGTCTAGGTAGCTCATTGAAATACCATAAATTGTCACAAGCAGCAAGGGAGCACATAATGAGAAACGATCGGTTACCACTGAAATACACGACGAGTTTTATTCTTTTGGAACAAGTCATGACGAGGGCTCGAGCCGAATTTGGAATGAGTAATGGTCAAACGAAAAGCCGAGTTGTGATGGGTGAAAGTAGGGGAGGATCGAGTTGGATGATGAGTTCACAGAAGGAGATAAGTATGATGAAAAGGGAGGTTGAGACAATGAAAGGGCAGCTCAATGATATTCAGATGTGCAAGACAAAGCTTGAAGGTCAAGTAAAGAAAGGTTTCAATTACAAGAAAAACTTTGCCAGTGTGCGGAAAATCGTCTGTTTAGGGTTCAATAGTGCTAAGATGAACATTGGCTTTGCTTCATTGTCAACTTGA
Protein sequence
MKENPKSLFGNEEDHELRRQYLELEKLEFRIATIVPVEMTEGRRNLNREIPTCGSVIGGKRNKCVIFPVKSSMVAESMDRSNKNWIVQTKPAYESDLIVRVGDFSFYLHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNVAPLYCAAHFLEMTDDLKQGNLTSKAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIPKCCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVSVLRIDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLNKLRSVTVESLIRILPFEENSVTSSFLLHILKLGSVMKIDSELLTILENRLATMLEKCDASDLLVKNYGEDDSVYDVAIVTRVVKSYAAHISDNSQSNLLVVGRLVDDYLMLVARDQNLRADCFQVLVEALPQNARVCFDNLYRAIDMYLKAHPELTEVERTCLGSSLKYHKLSQAAREHIMRNDRLPLKYTTSFILLEQVMTRARAEFGMSNGQTKSRVVMGESRGGSSWMMSSQKEISMMKREVETMKGQLNDIQMCKTKLEGQVKKGFNYKKNFASVRKIVCLGFNSAKMNIGFASLST
Homology
BLAST of CmaCh11G011250 vs. ExPASy Swiss-Prot
Match:
Q9FMF5 (Root phototropism protein 3 OS=Arabidopsis thaliana OX=3702 GN=RPT3 PE=1 SV=2)
HSP 1 Score: 320.1 bits (819), Expect = 5.6e-86
Identity = 217/658 (32.98%), Postives = 329/658 (50.00%), Query Frame = 0
Query: 76 ESMDRSNKNWIVQTKPAYESDLIVRVGDFSFYLHKLPMVARSKYLNRMIIQNSSHEVQKN 135
+ + ++W V T SDL+V++GD +F+LHK P+++RS +NR+I ++ ++
Sbjct: 37 DGFELRGQSWFVATD--IPSDLLVKIGDMNFHLHKYPLLSRSGKMNRLIYES------RD 96
Query: 136 NSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNVAPLYCAAHFLEMTDDLKQGNLTS 195
+ + LD+LPGG AFEL KFCYG VDLTA N++ L CAA +LEMT+DL++GNL
Sbjct: 97 PDPTILILDDLPGGPEAFELASKFCYGVPVDLTATNISGLRCAAEYLEMTEDLEEGNLIF 156
Query: 196 KAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIPKCCSEAIALKACMNPEA------ 255
K EAF+S+V+ SSW D+ VLKSCE +S A L I + CSE+IA KAC NP+
Sbjct: 157 KTEAFLSYVVLSSWRDSILVLKSCEKLSPWAENLQIVRRCSESIAWKACSNPKGIRWAYT 216
Query: 256 --------------------------FCNNDYNVDNVKLEVVADNWWFADVSVLRIDHFI 315
+C+ N ++ + V +WWF DVS+LRIDHF+
Sbjct: 217 GKAPSPSTTNFAGSSPRWNESKDSSFYCSPSRNTNS---QPVPPDWWFEDVSILRIDHFV 276
Query: 316 EVIESGKRRGMRSEVIGSCIAHWTMRW---------------FSSAM------------- 375
VI + K +GMR E++G+ I H+ +W SSA+
Sbjct: 277 RVITAIKVKGMRFELLGAVIMHYAGKWLPGLIKEGGVAIAPAMSSAIGGGLGLGGDEMSI 336
Query: 376 ----------------------------NGLENST-----LQHLNKLRSVTVESLIRILP 435
NG ++S L K + + VESLI I+P
Sbjct: 337 SCGSNSSGGSSGPDWKGGLHMVLSAGKTNGHQDSVACLAGLGISPKDQRMIVESLISIIP 396
Query: 436 FEENSVTSSFLLHILKLGSVMKIDSELLTILENRLATMLEKCDASDLLVKNY-GEDDSVY 495
+++SVT SFLL +L+ +++K+ L+T LE R+ E+ DLL+ Y + +++Y
Sbjct: 397 PQKDSVTCSFLLRLLRAANMLKVAPALITELEKRVGMQFEQATLQDLLIPGYNNKGETMY 456
Query: 496 DVAIVTRVVKSYAAHI---------------------------------SDNSQSNLLVV 555
DV +V R+++ + N+Q+ + V
Sbjct: 457 DVDLVQRLLEHFLVQEQTEGSSPSRMSPSPSQSMYADIPRGNNNNGGGGGGNNQNAKMRV 516
Query: 556 GRLVDDYLMLVARDQNLRADCFQVLVEALPQNARVCFDNLYRAIDMYLKAHPELTEVERT 595
RLVD YL VARD+NL FQVL EALP++AR C D LYRAID YLKAHP L+E ER
Sbjct: 517 ARLVDSYLTEVARDRNLPLTKFQVLAEALPESARTCDDGLYRAIDSYLKAHPTLSEHERK 576
BLAST of CmaCh11G011250 vs. ExPASy Swiss-Prot
Match:
Q5KS50 (Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CPT1 PE=2 SV=1)
HSP 1 Score: 306.6 bits (784), Expect = 6.5e-82
Identity = 211/653 (32.31%), Postives = 323/653 (49.46%), Query Frame = 0
Query: 80 RSNKNWIVQTKPAYESDLIVRVGDFSFYLHKLPMVARSKYLNRMIIQNSS---HEVQKNN 139
R +++W V + SDL+V+VGD +FYLHK PM++RS ++R + ++S+ E
Sbjct: 38 RRDRSWYVNSD--IPSDLLVKVGDVNFYLHKYPMISRSGRMSRAVYESSAADEAEADAAA 97
Query: 140 SVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNVAPLYCAAHFLEMTDDLKQGNLTSK 199
+V+ +E+ +LPGGA +FEL +F YG VDLTA N++ L CAA +LEMT+++++GNL K
Sbjct: 98 AVAVVEMGDLPGGAGSFELAARFSYGMAVDLTAANISGLRCAAEYLEMTEEMEEGNLIFK 157
Query: 200 AEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIPKCCSEAIALKACMNPEAF------ 259
EAF+S+V+ SSW D+ VLKSCE++S A L I + CSE+IA KAC NP
Sbjct: 158 TEAFLSYVVLSSWRDSIAVLKSCEALSPWAENLQIVRRCSESIAWKACANPRGVRWAYTG 217
Query: 260 ------------------------CNNDYNVDN-----------VKLEVVADNWWFADVS 319
+ +NV + V +WWF DVS
Sbjct: 218 AGAGSGGARGGPAAIRGGGGSGGTASPRWNVGGGGGGESKESSPSRQAVPPADWWFEDVS 277
Query: 320 VLRIDHFIEVIESGKRRGMRSEVIGSCIAHWTMRW------------------------- 379
VLRIDHF+ V+ + K +GMR ++IG+ I H+ +W
Sbjct: 278 VLRIDHFVRVVTAIKVKGMRFDLIGAAITHYASKWLPGLTKDAPLGATHDEPWAQASAAG 337
Query: 380 ----------FSSAMNGLEN--STLQHLNKLRSVTVESLIRILPFEENSVTSSFLLHILK 439
S A G ++ + ++ + + VES+I I P + +SV+ FLL +L+
Sbjct: 338 VGGGGLHMMIISGAGGGKDDVLAACSAPSREQRMVVESIISITPPQRDSVSCGFLLRLLR 397
Query: 440 LGSVMKIDSELLTILENRLATMLEKCDASDLLVKNYG--EDDSVYDVAIVTRVVKSY--- 499
L +++ L+T LE R+ LE+ +DLL+ +YG D+ YDV +V R+V+ +
Sbjct: 398 LAIMLRAAPALVTELEKRVGMQLEQAALADLLIPSYGGRAADTAYDVDLVQRLVEHFLVQ 457
Query: 500 -------------------------------------AAHISDNSQSNLLVVGRLVDDYL 559
+A S + V RL+D YL
Sbjct: 458 EQTEMAVASSPGRGDPPPPPQPEYYSGRMPPSSAAAASASASTGGLNAKARVARLLDSYL 517
Query: 560 MLVARDQNLRADCFQVLVEALPQNARVCFDNLYRAIDMYLKAHPELTEVERTCLGSSLKY 594
V+RD+NL FQVL E+LP++AR C D LYRA+D YLKAHP LTE ER L +
Sbjct: 518 SEVSRDRNLSLTKFQVLAESLPESARACDDGLYRAVDSYLKAHPTLTEHERKRLCRVMDC 577
BLAST of CmaCh11G011250 vs. ExPASy Swiss-Prot
Match:
Q9LFU0 (BTB/POZ domain-containing protein DOT3 OS=Arabidopsis thaliana OX=3702 GN=DOT3 PE=2 SV=1)
HSP 1 Score: 271.2 bits (692), Expect = 3.0e-71
Identity = 180/579 (31.09%), Postives = 302/579 (52.16%), Query Frame = 0
Query: 62 NKCVIFPVKSSMVAESMDRSNKNWIVQTKPAYESDLIVRVGDFSFYLHKLPMVARSKYLN 121
NK +IFP + +A S ++ +++W V K +DL ++V D +F HK P++++ Y++
Sbjct: 21 NKSIIFPSRVVTLANSFEKKDRSWYV--KSQIPTDLSIQVNDITFKAHKFPLISKCGYIS 80
Query: 122 RMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNVAPLYCAAHF 181
+ ++ S+ E + ++L+N PGGA FE ++KFCY +DL NVAPL CA+ +
Sbjct: 81 SIELKPSTSE-----NGYHLKLENFPGGADTFETILKFCYNLPLDLNPLNVAPLRCASEY 140
Query: 182 LEMTDDLKQGNLTSKAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIPKCCSEAIAL 241
L MT++ + GNL SK EAF++FV+ +SW DT VL+SC ++S A L I + C + +A
Sbjct: 141 LYMTEEFEAGNLISKTEAFITFVVLASWRDTLTVLRSCTNLSPWAENLQIVRRCCDLLAW 200
Query: 242 KACMNPEAFCNNDYNVDNVKLEVVADN--WWFADVSVLRIDHFIEVIESGKRRGMRSEVI 301
KAC N +N+ +VV N + D++ L IDHF+ VI + K R + ++
Sbjct: 201 KAC-----------NDNNIPEDVVDRNERCLYNDIATLDIDHFMRVITTMKARRAKPQIT 260
Query: 302 GSCIAHWT-------------MRWFSSAMNGLENST----LQHLNKL----RSVTVESLI 361
G I + ++ + N L+ S ++ N L T+ESL+
Sbjct: 261 GKIIMKYADNFLPVINDDLEGIKGYGLGKNELQFSVNRGRMEESNSLGCQEHKETIESLV 320
Query: 362 RILPFEENSVTSSFLLHILKLGSVMKIDSELLTILENRLATMLEKCDASDLLVKNYGEDD 421
+LP + +V+ FLL +LK V L++ LE R+ LE + DLL+ N+ ++
Sbjct: 321 SVLPPQSGAVSCHFLLRMLKTSIVYSASPALISDLEKRVGMALEDANVCDLLIPNFKNEE 380
Query: 422 SVYDVAIVTRVVKSYAAHISDNSQSNLL---VVGRLVDDYLMLVARDQNLRADCFQVLVE 481
V R+ + + H Q +L + +L+D+YL +A+D L FQVL E
Sbjct: 381 QQERV----RIFEFFLMH----EQQQVLGKPSISKLLDNYLAEIAKDPYLPITKFQVLAE 440
Query: 482 ALPQNARVCFDNLYRAIDMYLKAHPELTEVERTCLGSSLKYHKLSQAAREHIMRNDRLPL 541
LP+NA C D LYRAIDM+LK HP L++ +R L ++ KLS A H +NDRLPL
Sbjct: 441 MLPENAWKCHDGLYRAIDMFLKTHPSLSDHDRRRLCKTMNCEKLSLDACLHAAQNDRLPL 500
Query: 542 K----YTTSFILLEQVMTRARAEFGMSNGQTKSRVVMGESR--GGSSWMMSSQKEISMMK 601
+ T + EQV R + + + ++ + R + + + ++E+ +K
Sbjct: 501 RTIVQINTQVLFSEQVKMRMMMQDKLPEKEEENSGGREDKRMSRDNEIIKTLKEELENVK 560
Query: 602 REVETMKGQLNDIQMCKTKLEGQVKKGFNYKKNFASVRK 609
+++ ++ N++Q +L + K N+ + V+K
Sbjct: 561 KKMSELQSDYNELQQEYERLSSKQKSSHNWGLRWQKVKK 573
BLAST of CmaCh11G011250 vs. ExPASy Swiss-Prot
Match:
Q9C9Z0 (Putative BTB/POZ domain-containing protein At3g08660 OS=Arabidopsis thaliana OX=3702 GN=At3g08660 PE=3 SV=1)
HSP 1 Score: 254.6 bits (649), Expect = 2.9e-66
Identity = 172/513 (33.53%), Postives = 273/513 (53.22%), Query Frame = 0
Query: 96 DLIVRVGDFSFYLHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFEL 155
D+IV V SF LHK P+VARS + +M+ +S S IEL + PGG FEL
Sbjct: 37 DIIVVVDGESFLLHKFPLVARSGKMRKMV-------RDLKDSSSMIELRDFPGGPSTFEL 96
Query: 156 VMKFCYGWKVDLTAKNVAPLYCAAHFLEMTDDLKQGNLTSKAEAFMSFVISSSWNDTFKV 215
MKFCYG D+TA NV L CAA +LEMT+D K+ NL +AE ++ ++ S++++ V
Sbjct: 97 TMKFCYGINFDITAFNVVSLRCAAGYLEMTEDYKEQNLIFRAENYLDQIVFRSFHESVLV 156
Query: 216 LKSCESISRCANRLHIPKCCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVS 275
L SCE+ A IP C EAIA+ AC ++ LE+ W ++S
Sbjct: 157 LCSCET-QEIAETYEIPDRCVEAIAMNACRKQLVSGLSEELKGRDCLEM-----WTEELS 216
Query: 276 VLRIDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLNKLRSVTVE 335
L ID++++V+ + R +RSE I + + H+ +++ G+ + Q K+ VE
Sbjct: 217 ALGIDYYVQVVSAMARLSVRSESIVASLVHYA----KTSLKGIIDRNCQEQRKI----VE 276
Query: 336 SLIRILPFEENS------VTSSFLLHILKLGSVMKIDSELLTILENRLATMLEKCDASDL 395
+++ +LP +E + FL +LK+G+++ I+ LE R+ LE DL
Sbjct: 277 AMVNLLPNDEKGSYSLSIIPLGFLFGMLKVGTIIDIEISCRLELERRIGHQLETASLDDL 336
Query: 396 LVKNYGEDDSVYDVAIVTRVVKSYAAHI------------SDNSQSNLLVVGRLVDDYLM 455
L+ + +DS+YDV V R++ + I S S+LL VGR++D YL+
Sbjct: 337 LIPSVQNEDSMYDVDTVHRILTFFLERIEEEDDECGYDSDSTGQHSSLLKVGRIMDAYLV 396
Query: 456 LVARDQNLRADCFQVLVEALPQNARVCFDNLYRAIDMYLKAHPELTEVERTCLGSSLKYH 515
+A D L F ++E LP+++R+ D +YRAIDMYLKAHP LTE ER L + +
Sbjct: 397 EIAPDPYLSLHKFTAIIETLPEHSRIVDDGIYRAIDMYLKAHPLLTEEERKKLCNFIDCK 456
Query: 516 KLSQAAREHIMRNDRLPLKYTTSFILLEQVMTRARAEFGMSNGQTKSRVVMGESRGGSSW 575
KLSQ A H+ +NDRLP++ + EQ+ R + +S + V+ G S
Sbjct: 457 KLSQEASNHVAQNDRLPVQMVVRVLYTEQL----RLKKALSGDSEEGSWVL--PSGVQSR 516
Query: 576 MMSSQKEISMMKREVETMKGQLNDIQMCKTKLE 591
+S + + ++RE +K +++ +++ ++LE
Sbjct: 517 AVSPRDTYAALRRENRELKLEISRMRVRVSELE 522
BLAST of CmaCh11G011250 vs. ExPASy Swiss-Prot
Match:
Q9LYW0 (BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1)
HSP 1 Score: 253.1 bits (645), Expect = 8.5e-66
Identity = 176/580 (30.34%), Postives = 281/580 (48.45%), Query Frame = 0
Query: 75 AESMDRSNKNWIVQTKPAYESDLIVRVGDFSFYLHKLPMVARSKYLNRMIIQNSSHEVQK 134
+E+ R + W+ T SD+ + VGD F+LHK P+++RS L R+I ++S+ +
Sbjct: 10 SEAFHREGQTWLCTT--GLVSDVTIEVGDMKFHLHKFPLLSRSGLLERLIEESSTDD--- 69
Query: 135 NNSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNVAPLYCAAHFLEMTDDLKQGNLT 194
S + LD +PGG FELV KFCYG K++LTA NV L CAA +LEMTD+ +GNL
Sbjct: 70 -GSGCVLSLDEIPGGGKTFELVTKFCYGVKIELTAFNVVSLRCAAEYLEMTDNYGEGNLV 129
Query: 195 SKAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIPKCCSEAIALKACMNP------- 254
E F++ V +W D+ K L++CE + A LHI C +++A+KAC +P
Sbjct: 130 GMTETFLNEVF-GNWTDSIKALQTCEEVIDYAEDLHIISRCVDSLAVKACADPSLFNWPV 189
Query: 255 --------------EAFCNNDYNVDNVKLEVVADNWWFADVSVLRIDHFIEVIESGKRRG 314
E+ N + L+ ++WWF D S L + F +I + + RG
Sbjct: 190 GGGKNATSGQNTEDESHLWNGISASGKMLQHTGEDWWFDDASFLSLPLFKRLITAIEARG 249
Query: 315 MRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHL------NKLRSVTVESLIRILPFEENS 374
M+ E I + ++T R MN N Q + + + +E ++ +LP ++
Sbjct: 250 MKLENIAMAVMYYT-RKHVPLMNRQVNMDEQVIETPNPSEEDQKTCLEEIVGLLPSKKGV 309
Query: 375 VTSSFLLHILKLGSVMKIDSELLTILENRLATMLEKCDASDLLVKNYGEDDSVYDVAIVT 434
+ FLL +L+ V+ LE R+ L++ DLL+ N G +++YDV V
Sbjct: 310 NPTKFLLRLLQTAMVLHASQSSRENLERRIGNQLDQAALVDLLIPNMGYSETLYDVECVL 369
Query: 435 RVVKSYAAHISDNSQSNLL-----------------------VVGRLVDDYLMLVARDQN 494
R+++ + +S Q+ ++ +V LVD YL VA D N
Sbjct: 370 RMIEQF---VSSTEQAGIVPSPCIIEEGHLVKDGADLLTPTTLVATLVDGYLAEVAPDVN 429
Query: 495 LRADCFQVLVEALPQNARVCFDNLYRAIDMYLKAHPELTEVERTCLGSSLKYHKLSQAAR 554
L+ F+ + A+P AR D +Y AID+YLKAHP +T+ ER + + KLS A
Sbjct: 430 LKLAKFEAIAAAIPDYARPLDDGVYHAIDVYLKAHPWITDSEREHICRLMNCQKLSLEAS 489
Query: 555 EHIMRNDRLPLKYTTSFILLEQVMTRARAE--FGMSNGQTKSRVVMGESRGGSSWMMSSQ 602
H +N+RLPL+ + EQ+ R F +S G + G +
Sbjct: 490 THAAQNERLPLRVIVQVLFFEQLRLRTSVSGWFFVSENLDNPDNQHGANGGLLKPRGENV 549
BLAST of CmaCh11G011250 vs. TAIR 10
Match:
AT5G64330.1 (Phototropic-responsive NPH3 family protein )
HSP 1 Score: 320.1 bits (819), Expect = 4.0e-87
Identity = 217/658 (32.98%), Postives = 329/658 (50.00%), Query Frame = 0
Query: 76 ESMDRSNKNWIVQTKPAYESDLIVRVGDFSFYLHKLPMVARSKYLNRMIIQNSSHEVQKN 135
+ + ++W V T SDL+V++GD +F+LHK P+++RS +NR+I ++ ++
Sbjct: 37 DGFELRGQSWFVATD--IPSDLLVKIGDMNFHLHKYPLLSRSGKMNRLIYES------RD 96
Query: 136 NSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNVAPLYCAAHFLEMTDDLKQGNLTS 195
+ + LD+LPGG AFEL KFCYG VDLTA N++ L CAA +LEMT+DL++GNL
Sbjct: 97 PDPTILILDDLPGGPEAFELASKFCYGVPVDLTATNISGLRCAAEYLEMTEDLEEGNLIF 156
Query: 196 KAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIPKCCSEAIALKACMNPEA------ 255
K EAF+S+V+ SSW D+ VLKSCE +S A L I + CSE+IA KAC NP+
Sbjct: 157 KTEAFLSYVVLSSWRDSILVLKSCEKLSPWAENLQIVRRCSESIAWKACSNPKGIRWAYT 216
Query: 256 --------------------------FCNNDYNVDNVKLEVVADNWWFADVSVLRIDHFI 315
+C+ N ++ + V +WWF DVS+LRIDHF+
Sbjct: 217 GKAPSPSTTNFAGSSPRWNESKDSSFYCSPSRNTNS---QPVPPDWWFEDVSILRIDHFV 276
Query: 316 EVIESGKRRGMRSEVIGSCIAHWTMRW---------------FSSAM------------- 375
VI + K +GMR E++G+ I H+ +W SSA+
Sbjct: 277 RVITAIKVKGMRFELLGAVIMHYAGKWLPGLIKEGGVAIAPAMSSAIGGGLGLGGDEMSI 336
Query: 376 ----------------------------NGLENST-----LQHLNKLRSVTVESLIRILP 435
NG ++S L K + + VESLI I+P
Sbjct: 337 SCGSNSSGGSSGPDWKGGLHMVLSAGKTNGHQDSVACLAGLGISPKDQRMIVESLISIIP 396
Query: 436 FEENSVTSSFLLHILKLGSVMKIDSELLTILENRLATMLEKCDASDLLVKNY-GEDDSVY 495
+++SVT SFLL +L+ +++K+ L+T LE R+ E+ DLL+ Y + +++Y
Sbjct: 397 PQKDSVTCSFLLRLLRAANMLKVAPALITELEKRVGMQFEQATLQDLLIPGYNNKGETMY 456
Query: 496 DVAIVTRVVKSYAAHI---------------------------------SDNSQSNLLVV 555
DV +V R+++ + N+Q+ + V
Sbjct: 457 DVDLVQRLLEHFLVQEQTEGSSPSRMSPSPSQSMYADIPRGNNNNGGGGGGNNQNAKMRV 516
Query: 556 GRLVDDYLMLVARDQNLRADCFQVLVEALPQNARVCFDNLYRAIDMYLKAHPELTEVERT 595
RLVD YL VARD+NL FQVL EALP++AR C D LYRAID YLKAHP L+E ER
Sbjct: 517 ARLVDSYLTEVARDRNLPLTKFQVLAEALPESARTCDDGLYRAIDSYLKAHPTLSEHERK 576
BLAST of CmaCh11G011250 vs. TAIR 10
Match:
AT5G64330.2 (Phototropic-responsive NPH3 family protein )
HSP 1 Score: 281.6 bits (719), Expect = 1.6e-75
Identity = 184/531 (34.65%), Postives = 269/531 (50.66%), Query Frame = 0
Query: 76 ESMDRSNKNWIVQTKPAYESDLIVRVGDFSFYLHKLPMVARSKYLNRMIIQNSSHEVQKN 135
+ + ++W V T SDL+V++GD +F+LHK P+++RS +NR+I ++ ++
Sbjct: 37 DGFELRGQSWFVATD--IPSDLLVKIGDMNFHLHKYPLLSRSGKMNRLIYES------RD 96
Query: 136 NSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNVAPLYCAAHFLEMTDDLKQGNLTS 195
+ + LD+LPGG AFEL KFCYG VDLTA N++ L CAA +LEMT+DL++GNL
Sbjct: 97 PDPTILILDDLPGGPEAFELASKFCYGVPVDLTATNISGLRCAAEYLEMTEDLEEGNLIF 156
Query: 196 KAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIPKCCSEAIALKACMNPEA------ 255
K EAF+S+V+ SSW D+ VLKSCE +S A L I + CSE+IA KAC NP+
Sbjct: 157 KTEAFLSYVVLSSWRDSILVLKSCEKLSPWAENLQIVRRCSESIAWKACSNPKGIRWAYT 216
Query: 256 --------------------------FCNNDYNVDNVKLEVVADNWWFADVSVLRIDHFI 315
+C+ N ++ + V +WWF DVS+LRIDHF+
Sbjct: 217 GKAPSPSTTNFAGSSPRWNESKDSSFYCSPSRNTNS---QPVPPDWWFEDVSILRIDHFV 276
Query: 316 EVIESGKRRGMRSEVIGSCIAHWTMRW---------------FSSAM------------- 375
VI + K +GMR E++G+ I H+ +W SSA+
Sbjct: 277 RVITAIKVKGMRFELLGAVIMHYAGKWLPGLIKEGGVAIAPAMSSAIGGGLGLGGDEMSI 336
Query: 376 ----------------------------NGLENST-----LQHLNKLRSVTVESLIRILP 435
NG ++S L K + + VESLI I+P
Sbjct: 337 SCGSNSSGGSSGPDWKGGLHMVLSAGKTNGHQDSVACLAGLGISPKDQRMIVESLISIIP 396
Query: 436 FEENSVTSSFLLHILKLGSVMKIDSELLTILENRLATMLEKCDASDLLVKNY-GEDDSVY 480
+++SVT SFLL +L+ +++K+ L+T LE R+ E+ DLL+ Y + +++Y
Sbjct: 397 PQKDSVTCSFLLRLLRAANMLKVAPALITELEKRVGMQFEQATLQDLLIPGYNNKGETMY 456
BLAST of CmaCh11G011250 vs. TAIR 10
Match:
AT5G10250.1 (Phototropic-responsive NPH3 family protein )
HSP 1 Score: 271.2 bits (692), Expect = 2.1e-72
Identity = 180/579 (31.09%), Postives = 302/579 (52.16%), Query Frame = 0
Query: 62 NKCVIFPVKSSMVAESMDRSNKNWIVQTKPAYESDLIVRVGDFSFYLHKLPMVARSKYLN 121
NK +IFP + +A S ++ +++W V K +DL ++V D +F HK P++++ Y++
Sbjct: 21 NKSIIFPSRVVTLANSFEKKDRSWYV--KSQIPTDLSIQVNDITFKAHKFPLISKCGYIS 80
Query: 122 RMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNVAPLYCAAHF 181
+ ++ S+ E + ++L+N PGGA FE ++KFCY +DL NVAPL CA+ +
Sbjct: 81 SIELKPSTSE-----NGYHLKLENFPGGADTFETILKFCYNLPLDLNPLNVAPLRCASEY 140
Query: 182 LEMTDDLKQGNLTSKAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIPKCCSEAIAL 241
L MT++ + GNL SK EAF++FV+ +SW DT VL+SC ++S A L I + C + +A
Sbjct: 141 LYMTEEFEAGNLISKTEAFITFVVLASWRDTLTVLRSCTNLSPWAENLQIVRRCCDLLAW 200
Query: 242 KACMNPEAFCNNDYNVDNVKLEVVADN--WWFADVSVLRIDHFIEVIESGKRRGMRSEVI 301
KAC N +N+ +VV N + D++ L IDHF+ VI + K R + ++
Sbjct: 201 KAC-----------NDNNIPEDVVDRNERCLYNDIATLDIDHFMRVITTMKARRAKPQIT 260
Query: 302 GSCIAHWT-------------MRWFSSAMNGLENST----LQHLNKL----RSVTVESLI 361
G I + ++ + N L+ S ++ N L T+ESL+
Sbjct: 261 GKIIMKYADNFLPVINDDLEGIKGYGLGKNELQFSVNRGRMEESNSLGCQEHKETIESLV 320
Query: 362 RILPFEENSVTSSFLLHILKLGSVMKIDSELLTILENRLATMLEKCDASDLLVKNYGEDD 421
+LP + +V+ FLL +LK V L++ LE R+ LE + DLL+ N+ ++
Sbjct: 321 SVLPPQSGAVSCHFLLRMLKTSIVYSASPALISDLEKRVGMALEDANVCDLLIPNFKNEE 380
Query: 422 SVYDVAIVTRVVKSYAAHISDNSQSNLL---VVGRLVDDYLMLVARDQNLRADCFQVLVE 481
V R+ + + H Q +L + +L+D+YL +A+D L FQVL E
Sbjct: 381 QQERV----RIFEFFLMH----EQQQVLGKPSISKLLDNYLAEIAKDPYLPITKFQVLAE 440
Query: 482 ALPQNARVCFDNLYRAIDMYLKAHPELTEVERTCLGSSLKYHKLSQAAREHIMRNDRLPL 541
LP+NA C D LYRAIDM+LK HP L++ +R L ++ KLS A H +NDRLPL
Sbjct: 441 MLPENAWKCHDGLYRAIDMFLKTHPSLSDHDRRRLCKTMNCEKLSLDACLHAAQNDRLPL 500
Query: 542 K----YTTSFILLEQVMTRARAEFGMSNGQTKSRVVMGESR--GGSSWMMSSQKEISMMK 601
+ T + EQV R + + + ++ + R + + + ++E+ +K
Sbjct: 501 RTIVQINTQVLFSEQVKMRMMMQDKLPEKEEENSGGREDKRMSRDNEIIKTLKEELENVK 560
Query: 602 REVETMKGQLNDIQMCKTKLEGQVKKGFNYKKNFASVRK 609
+++ ++ N++Q +L + K N+ + V+K
Sbjct: 561 KKMSELQSDYNELQQEYERLSSKQKSSHNWGLRWQKVKK 573
BLAST of CmaCh11G011250 vs. TAIR 10
Match:
AT3G08660.1 (Phototropic-responsive NPH3 family protein )
HSP 1 Score: 254.6 bits (649), Expect = 2.1e-67
Identity = 172/513 (33.53%), Postives = 273/513 (53.22%), Query Frame = 0
Query: 96 DLIVRVGDFSFYLHKLPMVARSKYLNRMIIQNSSHEVQKNNSVSTIELDNLPGGAMAFEL 155
D+IV V SF LHK P+VARS + +M+ +S S IEL + PGG FEL
Sbjct: 37 DIIVVVDGESFLLHKFPLVARSGKMRKMV-------RDLKDSSSMIELRDFPGGPSTFEL 96
Query: 156 VMKFCYGWKVDLTAKNVAPLYCAAHFLEMTDDLKQGNLTSKAEAFMSFVISSSWNDTFKV 215
MKFCYG D+TA NV L CAA +LEMT+D K+ NL +AE ++ ++ S++++ V
Sbjct: 97 TMKFCYGINFDITAFNVVSLRCAAGYLEMTEDYKEQNLIFRAENYLDQIVFRSFHESVLV 156
Query: 216 LKSCESISRCANRLHIPKCCSEAIALKACMNPEAFCNNDYNVDNVKLEVVADNWWFADVS 275
L SCE+ A IP C EAIA+ AC ++ LE+ W ++S
Sbjct: 157 LCSCET-QEIAETYEIPDRCVEAIAMNACRKQLVSGLSEELKGRDCLEM-----WTEELS 216
Query: 276 VLRIDHFIEVIESGKRRGMRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHLNKLRSVTVE 335
L ID++++V+ + R +RSE I + + H+ +++ G+ + Q K+ VE
Sbjct: 217 ALGIDYYVQVVSAMARLSVRSESIVASLVHYA----KTSLKGIIDRNCQEQRKI----VE 276
Query: 336 SLIRILPFEENS------VTSSFLLHILKLGSVMKIDSELLTILENRLATMLEKCDASDL 395
+++ +LP +E + FL +LK+G+++ I+ LE R+ LE DL
Sbjct: 277 AMVNLLPNDEKGSYSLSIIPLGFLFGMLKVGTIIDIEISCRLELERRIGHQLETASLDDL 336
Query: 396 LVKNYGEDDSVYDVAIVTRVVKSYAAHI------------SDNSQSNLLVVGRLVDDYLM 455
L+ + +DS+YDV V R++ + I S S+LL VGR++D YL+
Sbjct: 337 LIPSVQNEDSMYDVDTVHRILTFFLERIEEEDDECGYDSDSTGQHSSLLKVGRIMDAYLV 396
Query: 456 LVARDQNLRADCFQVLVEALPQNARVCFDNLYRAIDMYLKAHPELTEVERTCLGSSLKYH 515
+A D L F ++E LP+++R+ D +YRAIDMYLKAHP LTE ER L + +
Sbjct: 397 EIAPDPYLSLHKFTAIIETLPEHSRIVDDGIYRAIDMYLKAHPLLTEEERKKLCNFIDCK 456
Query: 516 KLSQAAREHIMRNDRLPLKYTTSFILLEQVMTRARAEFGMSNGQTKSRVVMGESRGGSSW 575
KLSQ A H+ +NDRLP++ + EQ+ R + +S + V+ G S
Sbjct: 457 KLSQEASNHVAQNDRLPVQMVVRVLYTEQL----RLKKALSGDSEEGSWVL--PSGVQSR 516
Query: 576 MMSSQKEISMMKREVETMKGQLNDIQMCKTKLE 591
+S + + ++RE +K +++ +++ ++LE
Sbjct: 517 AVSPRDTYAALRRENRELKLEISRMRVRVSELE 522
BLAST of CmaCh11G011250 vs. TAIR 10
Match:
AT5G03250.1 (Phototropic-responsive NPH3 family protein )
HSP 1 Score: 253.1 bits (645), Expect = 6.0e-67
Identity = 176/580 (30.34%), Postives = 281/580 (48.45%), Query Frame = 0
Query: 75 AESMDRSNKNWIVQTKPAYESDLIVRVGDFSFYLHKLPMVARSKYLNRMIIQNSSHEVQK 134
+E+ R + W+ T SD+ + VGD F+LHK P+++RS L R+I ++S+ +
Sbjct: 10 SEAFHREGQTWLCTT--GLVSDVTIEVGDMKFHLHKFPLLSRSGLLERLIEESSTDD--- 69
Query: 135 NNSVSTIELDNLPGGAMAFELVMKFCYGWKVDLTAKNVAPLYCAAHFLEMTDDLKQGNLT 194
S + LD +PGG FELV KFCYG K++LTA NV L CAA +LEMTD+ +GNL
Sbjct: 70 -GSGCVLSLDEIPGGGKTFELVTKFCYGVKIELTAFNVVSLRCAAEYLEMTDNYGEGNLV 129
Query: 195 SKAEAFMSFVISSSWNDTFKVLKSCESISRCANRLHIPKCCSEAIALKACMNP------- 254
E F++ V +W D+ K L++CE + A LHI C +++A+KAC +P
Sbjct: 130 GMTETFLNEVF-GNWTDSIKALQTCEEVIDYAEDLHIISRCVDSLAVKACADPSLFNWPV 189
Query: 255 --------------EAFCNNDYNVDNVKLEVVADNWWFADVSVLRIDHFIEVIESGKRRG 314
E+ N + L+ ++WWF D S L + F +I + + RG
Sbjct: 190 GGGKNATSGQNTEDESHLWNGISASGKMLQHTGEDWWFDDASFLSLPLFKRLITAIEARG 249
Query: 315 MRSEVIGSCIAHWTMRWFSSAMNGLENSTLQHL------NKLRSVTVESLIRILPFEENS 374
M+ E I + ++T R MN N Q + + + +E ++ +LP ++
Sbjct: 250 MKLENIAMAVMYYT-RKHVPLMNRQVNMDEQVIETPNPSEEDQKTCLEEIVGLLPSKKGV 309
Query: 375 VTSSFLLHILKLGSVMKIDSELLTILENRLATMLEKCDASDLLVKNYGEDDSVYDVAIVT 434
+ FLL +L+ V+ LE R+ L++ DLL+ N G +++YDV V
Sbjct: 310 NPTKFLLRLLQTAMVLHASQSSRENLERRIGNQLDQAALVDLLIPNMGYSETLYDVECVL 369
Query: 435 RVVKSYAAHISDNSQSNLL-----------------------VVGRLVDDYLMLVARDQN 494
R+++ + +S Q+ ++ +V LVD YL VA D N
Sbjct: 370 RMIEQF---VSSTEQAGIVPSPCIIEEGHLVKDGADLLTPTTLVATLVDGYLAEVAPDVN 429
Query: 495 LRADCFQVLVEALPQNARVCFDNLYRAIDMYLKAHPELTEVERTCLGSSLKYHKLSQAAR 554
L+ F+ + A+P AR D +Y AID+YLKAHP +T+ ER + + KLS A
Sbjct: 430 LKLAKFEAIAAAIPDYARPLDDGVYHAIDVYLKAHPWITDSEREHICRLMNCQKLSLEAS 489
Query: 555 EHIMRNDRLPLKYTTSFILLEQVMTRARAE--FGMSNGQTKSRVVMGESRGGSSWMMSSQ 602
H +N+RLPL+ + EQ+ R F +S G + G +
Sbjct: 490 THAAQNERLPLRVIVQVLFFEQLRLRTSVSGWFFVSENLDNPDNQHGANGGLLKPRGENV 549
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FMF5 | 5.6e-86 | 32.98 | Root phototropism protein 3 OS=Arabidopsis thaliana OX=3702 GN=RPT3 PE=1 SV=2 | [more] |
Q5KS50 | 6.5e-82 | 32.31 | Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CP... | [more] |
Q9LFU0 | 3.0e-71 | 31.09 | BTB/POZ domain-containing protein DOT3 OS=Arabidopsis thaliana OX=3702 GN=DOT3 P... | [more] |
Q9C9Z0 | 2.9e-66 | 33.53 | Putative BTB/POZ domain-containing protein At3g08660 OS=Arabidopsis thaliana OX=... | [more] |
Q9LYW0 | 8.5e-66 | 30.34 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=A... | [more] |