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CmaCh11G010070 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATCGCCGAGAAGGAACCCCATAATGTTCTTCCACATTGTGTTGGAGAGGAACACGCAGCTGCATCCACGGCACTTCGGGCGTGGGCTCCGCGACAGCCTCGTAACCAAGCTCATGAAAGAGGTGGAGGGCACTTGCAGGTTTCTTCTTCTAACTCTTCGTTTCTTTTTGTTCAATTCTACGTAGAATTTGGCGGTTTCATATTAGATTTGGCACAGCGGACGGCATGGTTTTGTAGTGGCCATTACGGGCATCGAGAAAGTTGGGAAAGGGTTGATCCGTGATGGGACGGGCTTTGTGACCTTTCCTGTTAAGTATCAATGTGTTGTGTTTCGGCCTTTCAAGGGTGAAATCTTGGAAGCTTTTGTTTCTATGGTAAACAAGGTGGGTAATTTAGGAATACTATCTCCATTGGTATGAGAGCTTTGTGGAAAGTCCAAAGTAAAGTCACGAGAGTTTATGCTTAAGTGGACAATATCATACTATTGTGGAGAGTCGTATTCGTCGTCTAACACTTATGCGTTTGTTTGTTTTTGGTGATGAGCATGAATATGACTGCTCTAATGGGACTATTATGTAGATGGGTTTCTTTGCTGAAGCTGGACCCATTCAGATTTTTGTTTCTAATCATGTAAGGATGTTTCTTACTCAACTTTCTTTGTGTCATGTTGAATTAAACATCATTAAGGGGTATGTTGAATGAACTCATCTCATATCTTCTATTTCAGTTGATACCAGATGATATGGAATTTCAGTCCGGAGATATTCCAAACTATACCACTTCAGATGGATCAGTATATTTCTTAAACATCAAAAACTAATACTCTTGTTGCGTTAAATTTGCTTATAAATTACTTTAAGTTTTCTTATAGGTTAAGATCCAAAAGGACAGTGAAGTTCGATTAAAGATAATCGGGACTCGAGTAGATGCTACTGAAATTGTATGCCAATCACGACCATGATTTCAAATTTCTTTACATATTCTTTCAAGTTTTTGGTTGAACTATATGGTTTAACGAGCTAAGAACTTACCAAATCGAGTCGAGCTTATGCTTACTTTGTTGTGTCATTTATTAACACTATTGGGTTGGTTGGTTTGCAGTTTTGTGTTGGAACCATCAAAGACGATTTCATGGGTGTCATAAATGATCCTTCGGCGGCTTAGCTGCAATCTTGTTCAACAAATTCTTCCTCGCAATGGGGGTGGTGGTACTTTCCTTTAGCTAATTACTTTGTTTACATATTCATGTTATTCGGAATTATAATGAGTTTTGACTAAAAGTTCTCGTAAATTTTTG CATCGCCGAGAAGGAACCCCATAATGTTCTTCCACATTGTGTTGGAGAGGAACACGCAGCTGCATCCACGGCACTTCGGGCGTGGGCTCCGCGACAGCCTCGTAACCAAGCTCATGAAAGAGGTGGAGGGCACTTGCAGCGGACGGCATGGTTTTGTAGTGGCCATTACGGGCATCGAGAAAGTTGGGAAAGGGTTGATCCGTGATGGGACGGGCTTTGTGACCTTTCCTGTTAAGTATCAATGTGTTGTGTTTCGGCCTTTCAAGGGTGAAATCTTGGAAGCTTTTGTTTCTATGGTAAACAAGATGGGTTTCTTTGCTGAAGCTGGACCCATTCAGATTTTTGTTTCTAATCATTTGATACCAGATGATATGGAATTTCAGTCCGGAGATATTCCAAACTATACCACTTCAGATGGATCAGTTAAGATCCAAAAGGACAGTGAAGTTCGATTAAAGATAATCGGGACTCGAGTAGATGCTACTGAAATTTTTTGTGTTGGAACCATCAAAGACGATTTCATGGGTGTCATAAATGATCCTTCGGCGGCTTAGCTGCAATCTTGTTCAACAAATTCTTCCTCGCAATGGGGGTGGTGGTACTTTCCTTTAGCTAATTACTTTGTTTACATATTCATGTTATTCGGAATTATAATGAGTTTTGACTAAAAGTTCTCGTAAATTTTTG ATGTTCTTCCACATTGTGTTGGAGAGGAACACGCAGCTGCATCCACGGCACTTCGGGCGTGGGCTCCGCGACAGCCTCGTAACCAAGCTCATGAAAGAGGTGGAGGGCACTTGCAGCGGACGGCATGGTTTTGTAGTGGCCATTACGGGCATCGAGAAAGTTGGGAAAGGGTTGATCCGTGATGGGACGGGCTTTGTGACCTTTCCTGTTAAGTATCAATGTGTTGTGTTTCGGCCTTTCAAGGGTGAAATCTTGGAAGCTTTTGTTTCTATGGTAAACAAGATGGGTTTCTTTGCTGAAGCTGGACCCATTCAGATTTTTGTTTCTAATCATTTGATACCAGATGATATGGAATTTCAGTCCGGAGATATTCCAAACTATACCACTTCAGATGGATCAGTTAAGATCCAAAAGGACAGTGAAGTTCGATTAAAGATAATCGGGACTCGAGTAGATGCTACTGAAATTTTTTGTGTTGGAACCATCAAAGACGATTTCATGGGTGTCATAAATGATCCTTCGGCGGCTTAG MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNKMGFFAEAGPIQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSAA Homology
BLAST of CmaCh11G010070 vs. ExPASy Swiss-Prot
Match: P46279 (DNA-directed RNA polymerase II subunit RPB7 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 2.8e-91 Identity = 158/174 (90.80%), Postives = 170/174 (97.70%), Query Frame = 0
BLAST of CmaCh11G010070 vs. ExPASy Swiss-Prot
Match: P38421 (DNA-directed RNA polymerase II subunit 7 OS=Arabidopsis thaliana OX=3702 GN=NRPB7 PE=1 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 1.1e-87 Identity = 153/176 (86.93%), Postives = 168/176 (95.45%), Query Frame = 0
BLAST of CmaCh11G010070 vs. ExPASy Swiss-Prot
Match: Q5E9B8 (DNA-directed RNA polymerase II subunit RPB7 OS=Bos taurus OX=9913 GN=POLR2G PE=1 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 1.1e-50 Identity = 88/172 (51.16%), Postives = 128/172 (74.42%), Query Frame = 0
BLAST of CmaCh11G010070 vs. ExPASy Swiss-Prot
Match: Q7ZW41 (DNA-directed RNA polymerase II subunit RPB7 OS=Danio rerio OX=7955 GN=polr2g PE=2 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 1.1e-50 Identity = 89/172 (51.74%), Postives = 128/172 (74.42%), Query Frame = 0
BLAST of CmaCh11G010070 vs. ExPASy Swiss-Prot
Match: P62487 (DNA-directed RNA polymerase II subunit RPB7 OS=Homo sapiens OX=9606 GN=POLR2G PE=1 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 1.1e-50 Identity = 88/172 (51.16%), Postives = 128/172 (74.42%), Query Frame = 0
BLAST of CmaCh11G010070 vs. TAIR 10
Match: AT5G59180.1 (DNA-directed RNA polymerase II ) HSP 1 Score: 323.9 bits (829), Expect = 7.8e-89 Identity = 153/176 (86.93%), Postives = 168/176 (95.45%), Query Frame = 0
BLAST of CmaCh11G010070 vs. TAIR 10
Match: AT4G14660.1 (RNA polymerase Rpb7-like, N-terminal domain ) HSP 1 Score: 78.2 bits (191), Expect = 7.4e-15 Identity = 49/178 (27.53%), Postives = 94/178 (52.81%), Query Frame = 0
BLAST of CmaCh11G010070 vs. TAIR 10
Match: AT3G22900.1 (RNA polymerase Rpb7-like, N-terminal domain ) HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12 Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 0
BLAST of CmaCh11G010070 vs. TAIR 10
Match: AT1G06790.2 (RNA polymerase Rpb7 N-terminal domain-containing protein ) HSP 1 Score: 46.2 bits (108), Expect = 3.1e-05 Identity = 27/87 (31.03%), Postives = 41/87 (47.13%), Query Frame = 0
BLAST of CmaCh11G010070 vs. TAIR 10
Match: AT1G06790.1 (RNA polymerase Rpb7 N-terminal domain-containing protein ) HSP 1 Score: 46.2 bits (108), Expect = 3.1e-05 Identity = 27/87 (31.03%), Postives = 41/87 (47.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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