CmaCh11G009520 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G009520
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Germin-like protein
Location	Cma_Chr11: 5030624 .. 5032536 (-)
RNA-Seq Expression	CmaCh11G009520
Synteny	CmaCh11G009520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTACTTAGCTTTTGATCTGCTTCCATTGAATCCATGCTCTATAAATACAATTCAATCCATTCTAAGGCTTCTCATCAATTAAACAATACAAACTTGCTTCACCAAAAGCCAAAAAATGGCAAGATTTGGTGTTCTTTCAGTTGCTGTTCTTCTGGGCTTGCAAGCTGCTTTGCTTGTGTCTGGTTTTGATCCAAGTCCTCTTCAAGATTTCTGTGTTGCTGTTGATGAACCCAAATCTGCTGGTACATTATTCTCTCTTTCTTTAGCTTAAATGTCTCGTAGTCAATGTTTGTTTCGGGTAGGTTTGGAATGCGTTCTAGTTTCAATGCTTTTTGTGAGATCCCACGTCGGTTGGAGAAGGGAACGAAACATTTGTGATGAGGGTAGTGGACGTGTTTTAAAACCGTGAGGTTGTAACGTGTTAAAATGGATAATATTTGTTAATGGTGACTTTGGGCTGCTATAAATGGTATTAGAACTCAATACTGGCGGTGTGCTAGCGAGGATACTGGATCCTTAATGGGTTGGACTGTGAGGTTCCCCGTAGCGTTTTTTATAAGGGTGTGGAAACTTCTTCCTAGTAGATGCGTTTTAAAACTGTGAGGTTGATGGAGATATATAATGGGCTAAAACCGACAATATCTACTAGTGGTGGCATCGGGTTATTACAAATGATATTAGAGTTAGACATTGGGCGGTGTGCTAGTGAAGATGTTGGGTTTTCAAGGGGGTGGATTATGAGATCCCACGTTGGTTAGAGAGGGAAATTAAACATTCTTTATAAGAATATGGAAACTTCTCCCTAATAGATGCGTTATAAAATCGTGAGGCTAACGAGGCATCTAGGGGGGACTACAAGGTCCCACGTTGGTTGGAGAGGGGAATGAAACATCCCTTATACATAAGAGTGTGGAAACCTCTCATAGACGTATTATAAAAATGTGAGGTTGATAACTATATGTAACGAGCCAAAATAGACAACATCTACTAGTGAAAATGCTATCAAATCTAACATATTTTAAACTTTTTTTTGGTTGAGTATAGTATTTGTGAACGGGAAGTTCTGCAAGGACCCAAAGCTAGTGAATGCCGAAGACTTCTTATTCCAAGGACTCAACATTCCTGGAAACACAAATAATAAACAAGGCTCAAACGTGACTCTAATAAACGTGGACCGAATCCCCGGACTAAACACCCTTGGCATCTCTTTAGCTCGTCTCGACTATGCTCCATATGGGTTAAACCCACCTCACACGCACCCACGAGGCACCGAAATTCTCGTGGTCGTGGAAGGCAGCCTCCTAGTTGGGTTTGTGACGTCAAATCCAGACAACAAGCTCTTCACCAAAGTGCTATACAAAGGAGATGTGTTTGTGTTCCCCATTGGCCTCATTCACTTCCAATTCAACGTAGGACATGGCCCAGCCCTTGCCTTCGCTGGCCTCAGCAGCCAAAACCCAGGCACCATTACCATTGCCAACGCTGTGTTTGGATCTAAGCCGCCCATCTCGCTTGATGTTCTCACTAAGGCCTTCCAAGTTGATGAGAAAGTCATTGAGGCTCTCCAGATGCAGTTTAAGGCCTAGGAAGAATTGCAACTATGCAATGAAAAAGGGCTTTTGAATAAAAATTTACAACTTTTTGTAACCCTATTTGTGTTTGATCCTTTGAACTTTTGTCATACTACCCAATATTGGAATAAAAATGGGGTTTTCCCCTTCTTTTTAATCCCGTGCTTTCTTCTCTCCAGAGGCTCGTTGGAGAAATTTTAGGAATAGATTGATTAGCCTGATATAAATACCCCTTTATCTTACTTAGTTCATCATCTCAAGAAATTCAAACAATACAGAGTAATAGTTTCTACCGAATATCTTGTAATCTCTTCTTGATTGGTCATAATAAAGAGTGCG

mRNA sequence

AATTTACTTAGCTTTTGATCTGCTTCCATTGAATCCATGCTCTATAAATACAATTCAATCCATTCTAAGGCTTCTCATCAATTAAACAATACAAACTTGCTTCACCAAAAGCCAAAAAATGGCAAGATTTGGTGTTCTTTCAGTTGCTGTTCTTCTGGGCTTGCAAGCTGCTTTGCTTGTGTCTGGTTTTGATCCAAGTCCTCTTCAAGATTTCTGTGTTGCTGTTGATGAACCCAAATCTGCTGTATTTGTGAACGGGAAGTTCTGCAAGGACCCAAAGCTAGTGAATGCCGAAGACTTCTTATTCCAAGGACTCAACATTCCTGGAAACACAAATAATAAACAAGGCTCAAACGTGACTCTAATAAACGTGGACCGAATCCCCGGACTAAACACCCTTGGCATCTCTTTAGCTCGTCTCGACTATGCTCCATATGGGTTAAACCCACCTCACACGCACCCACGAGGCACCGAAATTCTCGTGGTCGTGGAAGGCAGCCTCCTAGTTGGGTTTGTGACGTCAAATCCAGACAACAAGCTCTTCACCAAAGTGCTATACAAAGGAGATGTGTTTGTGTTCCCCATTGGCCTCATTCACTTCCAATTCAACGTAGGACATGGCCCAGCCCTTGCCTTCGCTGGCCTCAGCAGCCAAAACCCAGGCACCATTACCATTGCCAACGCTGTGTTTGGATCTAAGCCGCCCATCTCGCTTGATGTTCTCACTAAGGCCTTCCAAGTTGATGAGAAAGTCATTGAGGCTCTCCAGATGCAGTTTAAGGCCTAGGAAGAATTGCAACTATGCAATGAAAAAGGGCTTTTGAATAAAAATTTACAACTTTTTGTAACCCTATTTGTGTTTGATCCTTTGAACTTTTGTCATACTACCCAATATTGGAATAAAAATGGGGTTTTCCCCTTCTTTTTAATCCCGTGCTTTCTTCTCTCCAGAGGCTCGTTGGAGAAATTTTAGGAATAGATTGATTAGCCTGATATAAATACCCCTTTATCTTACTTAGTTCATCATCTCAAGAAATTCAAACAATACAGAGTAATAGTTTCTACCGAATATCTTGTAATCTCTTCTTGATTGGTCATAATAAAGAGTGCG

Coding sequence (CDS)

ATGGCAAGATTTGGTGTTCTTTCAGTTGCTGTTCTTCTGGGCTTGCAAGCTGCTTTGCTTGTGTCTGGTTTTGATCCAAGTCCTCTTCAAGATTTCTGTGTTGCTGTTGATGAACCCAAATCTGCTGTATTTGTGAACGGGAAGTTCTGCAAGGACCCAAAGCTAGTGAATGCCGAAGACTTCTTATTCCAAGGACTCAACATTCCTGGAAACACAAATAATAAACAAGGCTCAAACGTGACTCTAATAAACGTGGACCGAATCCCCGGACTAAACACCCTTGGCATCTCTTTAGCTCGTCTCGACTATGCTCCATATGGGTTAAACCCACCTCACACGCACCCACGAGGCACCGAAATTCTCGTGGTCGTGGAAGGCAGCCTCCTAGTTGGGTTTGTGACGTCAAATCCAGACAACAAGCTCTTCACCAAAGTGCTATACAAAGGAGATGTGTTTGTGTTCCCCATTGGCCTCATTCACTTCCAATTCAACGTAGGACATGGCCCAGCCCTTGCCTTCGCTGGCCTCAGCAGCCAAAACCCAGGCACCATTACCATTGCCAACGCTGTGTTTGGATCTAAGCCGCCCATCTCGCTTGATGTTCTCACTAAGGCCTTCCAAGTTGATGAGAAAGTCATTGAGGCTCTCCAGATGCAGTTTAAGGCCTAG

Protein sequence

MARFGVLSVAVLLGLQAALLVSGFDPSPLQDFCVAVDEPKSAVFVNGKFCKDPKLVNAEDFLFQGLNIPGNTNNKQGSNVTLINVDRIPGLNTLGISLARLDYAPYGLNPPHTHPRGTEILVVVEGSLLVGFVTSNPDNKLFTKVLYKGDVFVFPIGLIHFQFNVGHGPALAFAGLSSQNPGTITIANAVFGSKPPISLDVLTKAFQVDEKVIEALQMQFKA

Homology

[Close]

BLAST of CmaCh11G009520 vs. ExPASy Swiss-Prot
Match: P92996 (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana OX=3702 GN=GLP5A PE=1 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.1e-79
Identity = 142/201 (70.65%), Postives = 171/201 (85.07%), Query Frame = 0


Query: 21  VSGFDPSPLQDFCVAVDEPKSAVFVNGKFCKDPKLVNAEDFLFQGLNIPGNTNNKQGSNV 80
           V+ +DPSPLQDFCVA+D+ K  VFVNG+FCKDPK V+A+DF F GLN+PGNTNN+ GSNV
Sbjct: 20  VNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNV 79

Query: 81  TLINVDRIPGLNTLGISLARLDYAPYGLNPPHTHPRGTEILVVVEGSLLVGFVTSNPD-N 140
           T +NVD+IPGLNT+GISL R+DYAP+G NPPHTHPRG+EILV+VEG+L VGFV+SN D N
Sbjct: 80  TTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNN 139

Query: 141 KLFTKVLYKGDVFVFPIGLIHFQFNVGHGPALAFAGLSSQNPGTITIANAVFGSKPPISL 200
           +LF KVL+ GDVFVFPIG+IHFQ NVG  PA+AFAGLSSQN G ITIAN VFGS PPI  
Sbjct: 140 RLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYP 199

Query: 201 DVLTKAFQVDEKVIEALQMQF 221
           ++L +AFQ+D  V++ LQ +F
Sbjct: 200 ELLARAFQLDASVVKELQAKF 219

[Close]

BLAST of CmaCh11G009520 vs. ExPASy Swiss-Prot
Match: P92997 (Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana OX=3702 GN=GLP6 PE=2 SV=2)

HSP 1 Score: 297.4 bits (760), Expect = 1.4e-79
Identity = 144/219 (65.75%), Postives = 178/219 (81.28%), Query Frame = 0


Query: 7   LSVAVLLGLQAALLVS---GFDPSPLQDFCVAVDEPKSAVFVNGKFCKDPKLVNAEDFLF 66
           +S +++L   +AL++S    +DPSPLQDFCVA+D+ K+ VFVNGKFCKDPK   AEDF F
Sbjct: 3   VSKSLILITLSALVISFAEAYDPSPLQDFCVAIDDLKNGVFVNGKFCKDPKQAKAEDFFF 62

Query: 67  QGLNIPGNTNNKQGSNVTLINVDRIPGLNTLGISLARLDYAPYGLNPPHTHPRGTEILVV 126
            GLN  G+TNNK  SNVT +NVD+IPGLNT+GISL R+DYAPYG NPPHTHPR TEILV+
Sbjct: 63  SGLNQAGSTNNKVRSNVTTVNVDQIPGLNTMGISLVRIDYAPYGQNPPHTHPRATEILVL 122

Query: 127 VEGSLLVGFVTSNPD-NKLFTKVLYKGDVFVFPIGLIHFQFNVGHGPALAFAGLSSQNPG 186
           +EG+L VGFV+SN D N+LF KVLY GDVFVFPIG+IHFQ N+G  PA+AFAGLSSQN G
Sbjct: 123 IEGTLYVGFVSSNQDNNRLFAKVLYPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAG 182

Query: 187 TITIANAVFGSKPPISLDVLTKAFQVDEKVIEALQMQFK 222
            ITIA+ VFGS PPI+ D+L +AFQ+D  ++E L+ +F+
Sbjct: 183 VITIADTVFGSTPPINPDILAQAFQLDVNIVEDLEAKFR 221

[Close]

BLAST of CmaCh11G009520 vs. ExPASy Swiss-Prot
Match: Q9SFF9 (Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana OX=3702 GN=At3g05950 PE=2 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.4e-79
Identity = 152/218 (69.72%), Postives = 179/218 (82.11%), Query Frame = 0


Query: 6   VLSVAVLLGLQAALLVSGFDPSPLQDFCVAVDEPKSAVFVNGKFCKDPKLVNAEDFLFQG 65
           +++ A+LL L A+  VS +DPSPLQDFCVAVD+  S VFVNGKFCKDPK V AEDF   G
Sbjct: 8   LVAKAILLAL-ASSFVSCYDPSPLQDFCVAVDD-ASGVFVNGKFCKDPKYVKAEDFFTSG 67

Query: 66  LNIPGNTNNKQGSNVTLINVDRIPGLNTLGISLARLDYAPYGLNPPHTHPRGTEILVVVE 125
           LNI GNT N+ GSNVT +NVD+IPGLNTLG+SL R+D+AP G NPPHTHPR TEILVVVE
Sbjct: 68  LNIAGNTINRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVE 127

Query: 126 GSLLVGFVTSNPD-NKLFTKVLYKGDVFVFPIGLIHFQFNVGHGPALAFAGLSSQNPGTI 185
           G+LLVGFVTSN D N+LF+KVLY GDVFVFPIG+IHFQ NVG   A+AFAGL SQNPGTI
Sbjct: 128 GTLLVGFVTSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVGRTNAVAFAGLGSQNPGTI 187

Query: 186 TIANAVFGSKPPISLDVLTKAFQVDEKVIEALQMQFKA 223
           TIA+AVFGSKP I  ++L KAFQ+D  V++ L+ +F +
Sbjct: 188 TIADAVFGSKPSIMPEILAKAFQLDVNVVKYLEARFSS 223

[Close]

BLAST of CmaCh11G009520 vs. ExPASy Swiss-Prot
Match: P92999 (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana OX=3702 GN=GLP2A PE=2 SV=2)

HSP 1 Score: 297.0 bits (759), Expect = 1.8e-79
Identity = 142/201 (70.65%), Postives = 171/201 (85.07%), Query Frame = 0


Query: 21  VSGFDPSPLQDFCVAVDEPKSAVFVNGKFCKDPKLVNAEDFLFQGLNIPGNTNNKQGSNV 80
           V+ +DPSPLQDFCVA+D+ K  VFVNG+FCKDPK V+A+DF F GLN+PGNTNN+ GSNV
Sbjct: 20  VNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQVGSNV 79

Query: 81  TLINVDRIPGLNTLGISLARLDYAPYGLNPPHTHPRGTEILVVVEGSLLVGFVTSNPD-N 140
           T +NVD+IPGLNT+GISL R+DYAP+G NPPHTHPRG+EILV+VEG+L VGFV+SN D N
Sbjct: 80  TTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNN 139

Query: 141 KLFTKVLYKGDVFVFPIGLIHFQFNVGHGPALAFAGLSSQNPGTITIANAVFGSKPPISL 200
           +LF KVL+ GDVFVFPIG+IHFQ NVG  PA+AFAGLSSQN G ITIAN VFGS PPI  
Sbjct: 140 RLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYP 199

Query: 201 DVLTKAFQVDEKVIEALQMQF 221
           ++L +AFQ+D  V++ LQ +F
Sbjct: 200 ELLARAFQLDASVVKELQAKF 219

[Close]

BLAST of CmaCh11G009520 vs. ExPASy Swiss-Prot
Match: Q9FIC8 (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana OX=3702 GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 2.4e-79
Identity = 140/201 (69.65%), Postives = 171/201 (85.07%), Query Frame = 0


Query: 21  VSGFDPSPLQDFCVAVDEPKSAVFVNGKFCKDPKLVNAEDFLFQGLNIPGNTNNKQGSNV 80
           V+ +DPSPLQDFCVA+D+ K  VFVNG+FCKDP+ V+A+DF F GLN+PGNTNN+ GSNV
Sbjct: 20  VNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQVGSNV 79

Query: 81  TLINVDRIPGLNTLGISLARLDYAPYGLNPPHTHPRGTEILVVVEGSLLVGFVTSNPD-N 140
           T +NVD+IPGLNT+GISL R+DYAP+G NPPHTHPRG+EILV+VEG+L VGFV+SN D N
Sbjct: 80  TTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNN 139

Query: 141 KLFTKVLYKGDVFVFPIGLIHFQFNVGHGPALAFAGLSSQNPGTITIANAVFGSKPPISL 200
           +LF KVL+ GDVFVFPIG+IHFQ N+G  PA+AFAGLSSQN G ITIAN VFGS PPI  
Sbjct: 140 RLFAKVLHPGDVFVFPIGMIHFQLNIGKIPAIAFAGLSSQNAGVITIANTVFGSNPPIYP 199

Query: 201 DVLTKAFQVDEKVIEALQMQF 221
           ++L +AFQ+D  V++ LQ +F
Sbjct: 200 ELLARAFQLDANVVKELQAKF 219

[Close]

BLAST of CmaCh11G009520 vs. TAIR 10
Match: AT5G39190.1 (germin-like protein 2 )

HSP 1 Score: 297.7 bits (761), Expect = 7.5e-81
Identity = 142/201 (70.65%), Postives = 171/201 (85.07%), Query Frame = 0


Query: 21  VSGFDPSPLQDFCVAVDEPKSAVFVNGKFCKDPKLVNAEDFLFQGLNIPGNTNNKQGSNV 80
           V+ +DPSPLQDFCVA+D+ K  VFVNG+FCKDPK V+A+DF F GLN+PGNTNN+ GSNV
Sbjct: 20  VNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNV 79

Query: 81  TLINVDRIPGLNTLGISLARLDYAPYGLNPPHTHPRGTEILVVVEGSLLVGFVTSNPD-N 140
           T +NVD+IPGLNT+GISL R+DYAP+G NPPHTHPRG+EILV+VEG+L VGFV+SN D N
Sbjct: 80  TTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNN 139

Query: 141 KLFTKVLYKGDVFVFPIGLIHFQFNVGHGPALAFAGLSSQNPGTITIANAVFGSKPPISL 200
           +LF KVL+ GDVFVFPIG+IHFQ NVG  PA+AFAGLSSQN G ITIAN VFGS PPI  
Sbjct: 140 RLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYP 199

Query: 201 DVLTKAFQVDEKVIEALQMQF 221
           ++L +AFQ+D  V++ LQ +F
Sbjct: 200 ELLARAFQLDASVVKELQAKF 219

[Close]

BLAST of CmaCh11G009520 vs. TAIR 10
Match: AT3G05950.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 297.4 bits (760), Expect = 9.8e-81
Identity = 152/218 (69.72%), Postives = 179/218 (82.11%), Query Frame = 0


Query: 6   VLSVAVLLGLQAALLVSGFDPSPLQDFCVAVDEPKSAVFVNGKFCKDPKLVNAEDFLFQG 65
           +++ A+LL L A+  VS +DPSPLQDFCVAVD+  S VFVNGKFCKDPK V AEDF   G
Sbjct: 8   LVAKAILLAL-ASSFVSCYDPSPLQDFCVAVDD-ASGVFVNGKFCKDPKYVKAEDFFTSG 67

Query: 66  LNIPGNTNNKQGSNVTLINVDRIPGLNTLGISLARLDYAPYGLNPPHTHPRGTEILVVVE 125
           LNI GNT N+ GSNVT +NVD+IPGLNTLG+SL R+D+AP G NPPHTHPR TEILVVVE
Sbjct: 68  LNIAGNTINRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVE 127

Query: 126 GSLLVGFVTSNPD-NKLFTKVLYKGDVFVFPIGLIHFQFNVGHGPALAFAGLSSQNPGTI 185
           G+LLVGFVTSN D N+LF+KVLY GDVFVFPIG+IHFQ NVG   A+AFAGL SQNPGTI
Sbjct: 128 GTLLVGFVTSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVGRTNAVAFAGLGSQNPGTI 187

Query: 186 TIANAVFGSKPPISLDVLTKAFQVDEKVIEALQMQFKA 223
           TIA+AVFGSKP I  ++L KAFQ+D  V++ L+ +F +
Sbjct: 188 TIADAVFGSKPSIMPEILAKAFQLDVNVVKYLEARFSS 223

[Close]

BLAST of CmaCh11G009520 vs. TAIR 10
Match: AT5G39160.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 297.0 bits (759), Expect = 1.3e-80
Identity = 142/201 (70.65%), Postives = 171/201 (85.07%), Query Frame = 0


Query: 21  VSGFDPSPLQDFCVAVDEPKSAVFVNGKFCKDPKLVNAEDFLFQGLNIPGNTNNKQGSNV 80
           V+ +DPSPLQDFCVA+D+ K  VFVNG+FCKDPK V+A+DF F GLN+PGNTNN+ GSNV
Sbjct: 20  VNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQVGSNV 79

Query: 81  TLINVDRIPGLNTLGISLARLDYAPYGLNPPHTHPRGTEILVVVEGSLLVGFVTSNPD-N 140
           T +NVD+IPGLNT+GISL R+DYAP+G NPPHTHPRG+EILV+VEG+L VGFV+SN D N
Sbjct: 80  TTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNN 139

Query: 141 KLFTKVLYKGDVFVFPIGLIHFQFNVGHGPALAFAGLSSQNPGTITIANAVFGSKPPISL 200
           +LF KVL+ GDVFVFPIG+IHFQ NVG  PA+AFAGLSSQN G ITIAN VFGS PPI  
Sbjct: 140 RLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYP 199

Query: 201 DVLTKAFQVDEKVIEALQMQF 221
           ++L +AFQ+D  V++ LQ +F
Sbjct: 200 ELLARAFQLDASVVKELQAKF 219

[Close]

BLAST of CmaCh11G009520 vs. TAIR 10
Match: AT5G39130.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 296.6 bits (758), Expect = 1.7e-80
Identity = 140/201 (69.65%), Postives = 171/201 (85.07%), Query Frame = 0


Query: 21  VSGFDPSPLQDFCVAVDEPKSAVFVNGKFCKDPKLVNAEDFLFQGLNIPGNTNNKQGSNV 80
           V+ +DPSPLQDFCVA+D+ K  VFVNG+FCKDP+ V+A+DF F GLN+PGNTNN+ GSNV
Sbjct: 20  VNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQVGSNV 79

Query: 81  TLINVDRIPGLNTLGISLARLDYAPYGLNPPHTHPRGTEILVVVEGSLLVGFVTSNPD-N 140
           T +NVD+IPGLNT+GISL R+DYAP+G NPPHTHPRG+EILV+VEG+L VGFV+SN D N
Sbjct: 80  TTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNN 139

Query: 141 KLFTKVLYKGDVFVFPIGLIHFQFNVGHGPALAFAGLSSQNPGTITIANAVFGSKPPISL 200
           +LF KVL+ GDVFVFPIG+IHFQ N+G  PA+AFAGLSSQN G ITIAN VFGS PPI  
Sbjct: 140 RLFAKVLHPGDVFVFPIGMIHFQLNIGKIPAIAFAGLSSQNAGVITIANTVFGSNPPIYP 199

Query: 201 DVLTKAFQVDEKVIEALQMQF 221
           ++L +AFQ+D  V++ LQ +F
Sbjct: 200 ELLARAFQLDANVVKELQAKF 219

[Close]

BLAST of CmaCh11G009520 vs. TAIR 10
Match: AT5G39150.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 294.7 bits (753), Expect = 6.4e-80
Identity = 144/213 (67.61%), Postives = 172/213 (80.75%), Query Frame = 0


Query: 11  VLLGLQAALLVS-GFDPSPLQDFCVAVDEPKSAVFVNGKFCKDPKLVNAEDFLFQGLNIP 70
           +L+ L A + ++  +DPSPLQDFCVA+D+PK+ VFVNGKFCKDPK   AEDF   GLN  
Sbjct: 8   ILITLSALVTIAKAYDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQA 67

Query: 71  GNTNNKQGSNVTLINVDRIPGLNTLGISLARLDYAPYGLNPPHTHPRGTEILVVVEGSLL 130
           G TNNK  SNVT +NVD+IPGLNTLGISL R+DYAPYG NPPHTHPR TEILV+VEG+L 
Sbjct: 68  GITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLY 127

Query: 131 VGFVTSNPD-NKLFTKVLYKGDVFVFPIGLIHFQFNVGHGPALAFAGLSSQNPGTITIAN 190
           VGFV+SN D N+LF KVL  GDVFVFPIG+IHFQ N+G  PA+AFAGLSSQN G ITIA+
Sbjct: 128 VGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIAD 187

Query: 191 AVFGSKPPISLDVLTKAFQVDEKVIEALQMQFK 222
            VFGS PPI+ D+L +AFQ+D  V++ L+ +FK
Sbjct: 188 TVFGSTPPINPDILAQAFQLDVNVVKDLEAKFK 220

The following BLAST results are available for this feature:

BLAST of CmaCh11G009520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92996	1.1e-79	70.65	Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana OX=3702 GN=GLP...	[more]
P92997	1.4e-79	65.75	Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana OX=3702 GN=GLP...	[more]
Q9SFF9	1.4e-79	69.72	Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana OX=3702 GN=At3g...	[more]
P92999	1.8e-79	70.65	Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana OX=3702 GN=GLP...	[more]
Q9FIC8	2.4e-79	69.65	Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana OX=3702 GN=At5...	[more]

BLAST of CmaCh11G009520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39190.1	7.5e-81	70.65	germin-like protein 2	[more]
AT3G05950.1	9.8e-81	69.72	RmlC-like cupins superfamily protein	[more]
AT5G39160.1	1.3e-80	70.65	RmlC-like cupins superfamily protein	[more]
AT5G39130.1	1.7e-80	69.65	RmlC-like cupins superfamily protein	[more]
AT5G39150.1	6.4e-80	67.61	RmlC-like cupins superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 177..192 score: 50.29 coord: 112..132 score: 61.9 coord: 144..164 score: 64.12
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 64..214 e-value: 5.8E-33 score: 125.5
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 65..212 e-value: 3.3E-51 score: 172.8
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 24..222 e-value: 8.9E-92 score: 308.0
None	No IPR available	PANTHER	PTHR31238	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3	coord: 19..221
None	No IPR available	PANTHER	PTHR31238:SF188	GERMIN-LIKE PROTEIN SUBFAMILY 1 MEMBER 13-RELATED	coord: 19..221
None	No IPR available	CDD	cd02241	cupin_OxOx	coord: 25..220 e-value: 2.47982E-95 score: 274.473
IPR019780	Germin, manganese binding site	PROSITE	PS00725	GERMIN	coord: 107..120
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 25..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G009520.1	CmaCh11G009520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0048046	apoplast
molecular_function	GO:0030145	manganese ion binding