CmaCh11G009100 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G009100
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	GTPase LSG1-2
Location	Cma_Chr11: 4713193 .. 4717803 (-)
RNA-Seq Expression	CmaCh11G009100
Synteny	CmaCh11G009100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAATTTTATTATACCTAATCATACATATTCAAAGCCGCCGCAGCTTGAATTTTCAGCCTCCGTTCCTCTGAAGTTGGTGAGTCCTCTTTTAAGTTCCGGCAATTCTAGGGCATCTGATCGGTACCGGAGAGTGGTATTAGGCTGTGCGTTGAGATTCGGCGATGGGGAAGAACGATAAGACGGGGCTGGGACGGGCTCTGGTGAAGCAACACAACCAGATGATCCAGCAGTCTAAGGAGAAAGGCCGAACCTACAGATCCCAGCATAAAAAGGTTTTGGAGTCCGTCACGGAGGTTAGCGATATCGAAGCCGTTATCCAACAAGCCGACGAGGCCGAGCGCCTCTTCTCCGCTGATCACCCTGTTCCGAACGTTCTCATTAAGATGTATGTTATCTACTTTCTAGGTTATGGATTTTCTTGTTTCTCACAGTATTTGCTCGAAAACTGTGGATTCACGAGCTGTTGAGATAAATTGTGTTTTAAGCATAGAAAGTGGAAGTAGTTTGTTTGTGTTGGACGGAGGTCATGGATGGATGGATTGGAAGGTGTTGATTATGCATGAAGTTCTACTAATGGATTTTCTTATTGGCTTCTGTTTTGGCCGTGATTAGGGATGGAAGTTCGAGCACGACTGGAGTTACGCCCGAGGAAAGGAGAGAGCAGCAGAAGATGGAGGAGGCTTTGCACGCTAGCAGTCTACGAGTTCCACGTAGGTTTGTCTTCTTTTCCTTACCATGTTTATGCAAGTTTTGCTTGGGAAATTTTGTTGCACAACACGTAAATCTCTTTCTTGTTGTAGGCCCCCATGGAATGCTAGGATGTCTGCAGAGGAGCTTGACGATAATGAACGACAGTCTTTCTTAATATGGCGTCGGAGCCTTGCAAGGTTAGCTCCAATTTAATCTCCCAGTTTTTGTTTGATTTGTACAATCTTGGCTCATTGAACTCGTATATGTAAATCATTCCCAAGTATGCTTATTTATAGTTAACGTTCATTTGTGATTATGTTTATTTTAGGCTCGAGGAGAATGAGAATCTTGTTCTTACACCATTTGAGAAGAACCTAGATATTTGGAGACAGCTTTGGCGGGTTGTTGAACGATGTGATTTGGTAAGGTCAAGTTCATCTTTTTGATGATGACTGTGATATAATTGTCATCCCAACACTCAGCATGGTTCTTCAATATAATTTTCTGTTAACATTATTGTTCCCTCACGCAAAATAAAGGCATATCATATGTTTAGCAATAATAAATCGTACAGTGGGTTAGATTGATTTAAATTTTATCATTTGGGTGTCTGCAAGAATTTTGGGGGAGGCCTTTGGTGCTTAGGCTCTCTAAAGGAGTGTTTTTTTCGGCTTAAATCTTCAACTGTGCCATGTATTTTCTTTCTATCATTTGAGTCAAGTAATTTTCTCATTTCTGGTGTAGATATGTTAAATCTATAGATTTTATTTCTTCTTTATCTATTATGATTTTTTTTTGATAATTTTGTGTTTTCTTTTTCCTTTTGAGGATGGCTCATCCTTTTCCCTGCCTAGAGTATCATGTGCTGTGTAAGATTAGAGTAACAATTCAATATTCAAGTGTAAAGTTTATCATCTGAAAGTTTCTTAGTTTGAGCTTGCAATACTACCTTGAGTTCCACTGCCAGGACATAAATCTTCTTTCTAAATTATTATCACACAAGTATGCTTATTGATAACTGTGCTTGAAATTTTAGTATTACATTATCATATGGATAAGAAGCAATAGTATTACATTATTTTATAAACGTTGGAATGTGTTTACTTATTTTATCCGTAATACTATGAAACTTATTAATTGCTATTGTTGTTACCTGTTTTATTAAGTGCACTTTTATTTCCCATGTTTTATAGTGTGGAAACTAGGAAGTGAATAAAAGTTAGCTATTATATGTATAACCAGCCAGTTCTCAAATCTCCCGGTTTAGTAATTGTCTTATTACTCCCTCTGTTGATTTGTATTTACAATCATGTTAAGTTCATCCTCCATCATAATGTTTTTTCATTTCTTGTTCCTTCTCAGCTTGTGATGGTTGTTGATGCTCGCGACCCTTTATTCTACCGTTGCCCTGACCTTGAGGTGAATTATTTTCTTTATTGTCTTTCTACCATAATTTTTCTGTTTTTCTGTTCTGATTGAGTTTGATGCCTGAGAATGTTCTATCTCATTTATGTGGACTTGGGTTTATACTAGAAAAGGAATAAAGAATGAGTTGCCATCTAGCTAATACATTTTTTTTGCTGAACTTTTTTATTTTATTTTATTTTTATTATATAACTTTGTGATGATAATTTAGTTATCTTGCACGCACTACTCTTGTTCCTTTTCCTGTTCTTTTCTCTGACTAAATTTGAATGTCTGAAATATGTGTCCCATTTGATATGTTAACCCTGTGTTACTTGTGCCGTGCATTTAATTACTCCAAAACAAGTTATACATTTGGTGTTATGATCATATGTAATTTTTTTTTTGATATGTTAACCCTGTGTTACTCGTGCAGTACATTTAAATACTCCAAAACAAGTTCTACACTTGGTGTTATGATCATATGTAATTTTTTTGAAGTTCTGAAAAAGCAATGAAATAAAAAGATATTCAATACTTTGTACTTTTTTTTTTCCAGTGATATGATACTAATGACCATTTTTTGTTTTCCATTGGTATATTTGAGCTTAAATGTCCTGTCTTTATTAGACAATCGAATCATTTACTTGGTTTAGAATTTACTTAACATTTTGTATTGCTTTACTTACCATCATTTGTTTGGCATGTTATGTTAAAAAATTCTGTTTTTTTTTACTGAACTCTGCAACTATTGAATATTTGCATGAAAATTGCAACTGGTATGTCTTAATGCTGACATAAAAATTGTTGTCTTTGTGATTCTAAAACCTGTCGCAGTTTGCAACATTCTCCTTTGTGTCTTCATGTCCACTCTTCTTAGTTTTTCCTTTTGGCCTAATTTTGTTGTTTGTGCAGGCATACGCAAAAGAGGTTGATGAGCACAAGAGGACCATGCTTCTTGTGAACAAGGCAGATCTGCTACCTTACTCTCTCAGGTTAATGATTGTTATTTATTATTTAAATGTTAGTCTATGTTTATGTGCTGTCTTTTAATCAACAAAAATTCCATGTCGATACTTATGAACAGGAAGAAATGGTCTGAATTTTTCAGTCAGAATGAGATATTATATTTGTTTTGGTCTGCTAAAGCTGCCTCTGCTACTCTAGAAGGGAAGAAACTTAGCAGCCGGTGGAACACAGATGAACCTCAGGACGGTTTGGATGATCATGATACAAAAATATATGGTCGGGACGAGCTTCTGGCTCGTTTACAGTACGAGGCAGAACAGATTGCCGAGAAGAGGACAACATCAAGCACTAGTTCTACAAGCCAGTCGGACAATCATTCTTCCGGTGGAAATACAAACCAAAGATCATCGAGTAGCGTCATGGTGGGATTTGTTGGGTATCCAAATGTGGGAAAGAGCTCAACAATTAATGCCCTAGTAGGCCAAAAGCGAGCTGGAGTCACCTCTACTCCCGGGAAAACAAAGCACTTCCAAACATTGATTATTTCTGAGAAGCTTACACTATGTGACTGCCCTGGTTTAGTTTTTCCTTCATTTTCAAGCTCAAGATACGAGATGATTGCGTACGGAGTATTGCCTATTGATCGAATGACAGAGCATAGAGAGGCCATCCAGGTTGTCGCCAATCGAGTCCCAAGGCATGTGATTGAGGGTGTGTACAAAATTAATCTGCCAAAACCGAAGCCGTATGAGCCACAGTCTCGGGCACCACTAGCATCAGAACTTCTGAAAGCTTATTGTTTCTCCCGTGGTTATGTTGCCTCTAGTGGACTGCCTGACGAAACCAGAGCTTCCCGCCAAATTTTGAAGGATTACGTTGATGGGAAGATTCCTCACTATGAATACCCCCCAGGAATGTCAAGCGAGGATGATATTCAAGATGAAGATGCTGCAACTACCAGGCTTTCCGACGCACACGATTCAGACTCGGATGATATTGAGGACTCCTCAGATGTGGATAATGAAAATGCCTCTGGTCTTGAACATGTGACTGAGTATCTCGATTCATTTGACATAGCAAATGGACTTGCGAAGCCGAGCGTCACCGAAAGGAAGCCCAAGGAATCTCATAAACACCACAAGAAGCCGCAAAGAAAGAAGGATCGGTCATGGCGGGTGGCAAATCATGATGGCGATGGTATGCCTGCAATGAGAGTGTTTCAGAAGCCAATAAACTCAGCCTCCCTGAAAGTGTTACCATGAGGTTAGTTGATGCATCTCTATTAACTTTCAAGGCTGAGGGAGAGACCAAATTAACGAAAATGGAAATGGTAGAATTAAGAGCAGCAACAATATATATTATTATTGTTCTTTAATGGGGTGTGAAATTTATGAAATGGTTATAGTTCCTTGTTTTTCCATGAATTTTACTCGCGTTTTGAAGGTTTTTTGTGATACCTAAGCAGCTTCTCTCTCTCTCTTTCTCTTCCTGCGAGGGATGAAAGAGAGTACACCTCTTCGCCTTTAATGCCAGTTTCAAGCTTCAT

mRNA sequence

AATAATTTTATTATACCTAATCATACATATTCAAAGCCGCCGCAGCTTGAATTTTCAGCCTCCGTTCCTCTGAAGTTGGTGAGTCCTCTTTTAAGTTCCGGCAATTCTAGGGCATCTGATCGGTACCGGAGAGTGGTATTAGGCTGTGCGTTGAGATTCGGCGATGGGGAAGAACGATAAGACGGGGCTGGGACGGGCTCTGGTGAAGCAACACAACCAGATGATCCAGCAGTCTAAGGAGAAAGGCCGAACCTACAGATCCCAGCATAAAAAGGTTTTGGAGTCCGTCACGGAGGTTAGCGATATCGAAGCCGTTATCCAACAAGCCGACGAGGCCGAGCGCCTCTTCTCCGCTGATCACCCTGTTCCGAACGTTCTCATTAAGATGGATGGAAGTTCGAGCACGACTGGAGTTACGCCCGAGGAAAGGAGAGAGCAGCAGAAGATGGAGGAGGCTTTGCACGCTAGCAGTCTACGAGTTCCACGTAGGCCCCCATGGAATGCTAGGATGTCTGCAGAGGAGCTTGACGATAATGAACGACAGTCTTTCTTAATATGGCGTCGGAGCCTTGCAAGGCTCGAGGAGAATGAGAATCTTGTTCTTACACCATTTGAGAAGAACCTAGATATTTGGAGACAGCTTTGGCGGGTTGTTGAACGATGTGATTTGCTTGTGATGGTTGTTGATGCTCGCGACCCTTTATTCTACCGTTGCCCTGACCTTGAGGCATACGCAAAAGAGGTTGATGAGCACAAGAGGACCATGCTTCTTGTGAACAAGGCAGATCTGCTACCTTACTCTCTCAGGAAGAAATGGTCTGAATTTTTCAGTCAGAATGAGATATTATATTTGTTTTGGTCTGCTAAAGCTGCCTCTGCTACTCTAGAAGGGAAGAAACTTAGCAGCCGGTGGAACACAGATGAACCTCAGGACGGTTTGGATGATCATGATACAAAAATATATGGTCGGGACGAGCTTCTGGCTCGTTTACAGTACGAGGCAGAACAGATTGCCGAGAAGAGGACAACATCAAGCACTAGTTCTACAAGCCAGTCGGACAATCATTCTTCCGGTGGAAATACAAACCAAAGATCATCGAGTAGCGTCATGGTGGGATTTGTTGGGTATCCAAATGTGGGAAAGAGCTCAACAATTAATGCCCTAGTAGGCCAAAAGCGAGCTGGAGTCACCTCTACTCCCGGGAAAACAAAGCACTTCCAAACATTGATTATTTCTGAGAAGCTTACACTATGTGACTGCCCTGGTTTAGTTTTTCCTTCATTTTCAAGCTCAAGATACGAGATGATTGCGTACGGAGTATTGCCTATTGATCGAATGACAGAGCATAGAGAGGCCATCCAGGTTGTCGCCAATCGAGTCCCAAGGCATGTGATTGAGGGTGTGTACAAAATTAATCTGCCAAAACCGAAGCCGTATGAGCCACAGTCTCGGGCACCACTAGCATCAGAACTTCTGAAAGCTTATTGTTTCTCCCGTGGTTATGTTGCCTCTAGTGGACTGCCTGACGAAACCAGAGCTTCCCGCCAAATTTTGAAGGATTACGTTGATGGGAAGATTCCTCACTATGAATACCCCCCAGGAATGTCAAGCGAGGATGATATTCAAGATGAAGATGCTGCAACTACCAGGCTTTCCGACGCACACGATTCAGACTCGGATGATATTGAGGACTCCTCAGATGTGGATAATGAAAATGCCTCTGGTCTTGAACATGTGACTGAGTATCTCGATTCATTTGACATAGCAAATGGACTTGCGAAGCCGAGCGTCACCGAAAGGAAGCCCAAGGAATCTCATAAACACCACAAGAAGCCGCAAAGAAAGAAGGATCGGTCATGGCGGGTGGCAAATCATGATGGCGATGGTATGCCTGCAATGAGAGTGTTTCAGAAGCCAATAAACTCAGCCTCCCTGAAAGTGTTACCATGAGGTTAGTTGATGCATCTCTATTAACTTTCAAGGCTGAGGGAGAGACCAAATTAACGAAAATGGAAATGGTAGAATTAAGAGCAGCAACAATATATATTATTATTGTTCTTTAATGGGGTGTGAAATTTATGAAATGGTTATAGTTCCTTGTTTTTCCATGAATTTTACTCGCGTTTTGAAGGTTTTTTGTGATACCTAAGCAGCTTCTCTCTCTCTCTTTCTCTTCCTGCGAGGGATGAAAGAGAGTACACCTCTTCGCCTTTAATGCCAGTTTCAAGCTTCAT

Coding sequence (CDS)

ATGGGGAAGAACGATAAGACGGGGCTGGGACGGGCTCTGGTGAAGCAACACAACCAGATGATCCAGCAGTCTAAGGAGAAAGGCCGAACCTACAGATCCCAGCATAAAAAGGTTTTGGAGTCCGTCACGGAGGTTAGCGATATCGAAGCCGTTATCCAACAAGCCGACGAGGCCGAGCGCCTCTTCTCCGCTGATCACCCTGTTCCGAACGTTCTCATTAAGATGGATGGAAGTTCGAGCACGACTGGAGTTACGCCCGAGGAAAGGAGAGAGCAGCAGAAGATGGAGGAGGCTTTGCACGCTAGCAGTCTACGAGTTCCACGTAGGCCCCCATGGAATGCTAGGATGTCTGCAGAGGAGCTTGACGATAATGAACGACAGTCTTTCTTAATATGGCGTCGGAGCCTTGCAAGGCTCGAGGAGAATGAGAATCTTGTTCTTACACCATTTGAGAAGAACCTAGATATTTGGAGACAGCTTTGGCGGGTTGTTGAACGATGTGATTTGCTTGTGATGGTTGTTGATGCTCGCGACCCTTTATTCTACCGTTGCCCTGACCTTGAGGCATACGCAAAAGAGGTTGATGAGCACAAGAGGACCATGCTTCTTGTGAACAAGGCAGATCTGCTACCTTACTCTCTCAGGAAGAAATGGTCTGAATTTTTCAGTCAGAATGAGATATTATATTTGTTTTGGTCTGCTAAAGCTGCCTCTGCTACTCTAGAAGGGAAGAAACTTAGCAGCCGGTGGAACACAGATGAACCTCAGGACGGTTTGGATGATCATGATACAAAAATATATGGTCGGGACGAGCTTCTGGCTCGTTTACAGTACGAGGCAGAACAGATTGCCGAGAAGAGGACAACATCAAGCACTAGTTCTACAAGCCAGTCGGACAATCATTCTTCCGGTGGAAATACAAACCAAAGATCATCGAGTAGCGTCATGGTGGGATTTGTTGGGTATCCAAATGTGGGAAAGAGCTCAACAATTAATGCCCTAGTAGGCCAAAAGCGAGCTGGAGTCACCTCTACTCCCGGGAAAACAAAGCACTTCCAAACATTGATTATTTCTGAGAAGCTTACACTATGTGACTGCCCTGGTTTAGTTTTTCCTTCATTTTCAAGCTCAAGATACGAGATGATTGCGTACGGAGTATTGCCTATTGATCGAATGACAGAGCATAGAGAGGCCATCCAGGTTGTCGCCAATCGAGTCCCAAGGCATGTGATTGAGGGTGTGTACAAAATTAATCTGCCAAAACCGAAGCCGTATGAGCCACAGTCTCGGGCACCACTAGCATCAGAACTTCTGAAAGCTTATTGTTTCTCCCGTGGTTATGTTGCCTCTAGTGGACTGCCTGACGAAACCAGAGCTTCCCGCCAAATTTTGAAGGATTACGTTGATGGGAAGATTCCTCACTATGAATACCCCCCAGGAATGTCAAGCGAGGATGATATTCAAGATGAAGATGCTGCAACTACCAGGCTTTCCGACGCACACGATTCAGACTCGGATGATATTGAGGACTCCTCAGATGTGGATAATGAAAATGCCTCTGGTCTTGAACATGTGACTGAGTATCTCGATTCATTTGACATAGCAAATGGACTTGCGAAGCCGAGCGTCACCGAAAGGAAGCCCAAGGAATCTCATAAACACCACAAGAAGCCGCAAAGAAAGAAGGATCGGTCATGGCGGGTGGCAAATCATGATGGCGATGGTATGCCTGCAATGAGAGTGTTTCAGAAGCCAATAAACTCAGCCTCCCTGAAAGTGTTACCATGA

Protein sequence

MGKNDKTGLGRALVKQHNQMIQQSKEKGRTYRSQHKKVLESVTEVSDIEAVIQQADEAERLFSADHPVPNVLIKMDGSSSTTGVTPEERREQQKMEEALHASSLRVPRRPPWNARMSAEELDDNERQSFLIWRRSLARLEENENLVLTPFEKNLDIWRQLWRVVERCDLLVMVVDARDPLFYRCPDLEAYAKEVDEHKRTMLLVNKADLLPYSLRKKWSEFFSQNEILYLFWSAKAASATLEGKKLSSRWNTDEPQDGLDDHDTKIYGRDELLARLQYEAEQIAEKRTTSSTSSTSQSDNHSSGGNTNQRSSSSVMVGFVGYPNVGKSSTINALVGQKRAGVTSTPGKTKHFQTLIISEKLTLCDCPGLVFPSFSSSRYEMIAYGVLPIDRMTEHREAIQVVANRVPRHVIEGVYKINLPKPKPYEPQSRAPLASELLKAYCFSRGYVASSGLPDETRASRQILKDYVDGKIPHYEYPPGMSSEDDIQDEDAATTRLSDAHDSDSDDIEDSSDVDNENASGLEHVTEYLDSFDIANGLAKPSVTERKPKESHKHHKKPQRKKDRSWRVANHDGDGMPAMRVFQKPINSASLKVLP

Homology

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BLAST of CmaCh11G009100 vs. ExPASy Swiss-Prot
Match: Q9SJF1 (GTPase LSG1-2 OS=Arabidopsis thaliana OX=3702 GN=LSG1-2 PE=1 SV=1)

HSP 1 Score: 735.3 bits (1897), Expect = 5.3e-211
Identity = 391/595 (65.71%), Postives = 465/595 (78.15%), Query Frame = 0


Query: 1   MGKNDKTGLGRALVKQHNQMIQQSKEKGRTYRSQHKKVLESVTEVSDIEAVIQQADEAER 60
           MGK++KT LGR+LVK HN MIQ+SK+KG+ Y++  KKVLESVTEVSDI+A+I+QA+EAER
Sbjct: 1   MGKSEKTSLGRSLVKHHNHMIQESKDKGKYYKNLQKKVLESVTEVSDIDAIIEQAEEAER 60

Query: 61  LFSADHPVPNVL-IKMDGSSSTTGVTPEERREQQKMEEALHASSLRVPRRPPWNARMSAE 120
           L++ +H     L I +D +SS++ +  EE REQQK+EEALHASSL+VPRRPPW   MS E
Sbjct: 61  LYTINHSSSTPLSINLDTNSSSSVIAAEEWREQQKIEEALHASSLQVPRRPPWTPEMSVE 120

Query: 121 ELDDNERQSFLIWRRSLARLEENENLVLTPFEKNLDIWRQLWRVVERCDLLVMVVDARDP 180
           ELD NE+Q+FL WRR L  LEENE LVLTPFEKNLDIWRQLWRV+ER DL+VMVVDARDP
Sbjct: 121 ELDANEKQAFLNWRRMLVSLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDARDP 180

Query: 181 LFYRCPDLEAYAKEVDEHKRTMLLVNKADLLPYSLRKKWSEFFSQNEILYLFWSAKAASA 240
           LFYRCPDLEAYA+E+DEHK+ MLLVNKADLLP  +R+KW+E+F  N IL++FWSA AA+A
Sbjct: 181 LFYRCPDLEAYAQEIDEHKKIMLLVNKADLLPTDVREKWAEYFRLNNILFVFWSAIAATA 240

Query: 241 TLEGKKLSSRWNTDEPQDGLDDHDTKIYGRDELLARLQYEAEQIAEKRTTSSTSSTSQSD 300
           TLEGK L  +W   +     DD D  IYGRDELL+RLQ+EA++I + R + + S +SQS 
Sbjct: 241 TLEGKVLKEQWRQPDNLQKTDDPDIMIYGRDELLSRLQFEAQEIVKVRNSRAASVSSQS- 300

Query: 301 NHSSGGNTNQRSSSSVMVGFVGYPNVGKSSTINALVGQKRAGVTSTPGKTKHFQTLIISE 360
                  T +      +VGFVGYPNVGKSSTINALVGQKR GVTSTPGKTKHFQTLIIS+
Sbjct: 301 ------WTGEYQRDQAVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISD 360

Query: 361 KLTLCDCPGLVFPSFSSSRYEMIAYGVLPIDRMTEHREAIQVVANRVPRHVIEGVYKINL 420
           +L LCDCPGLVFPSFSSSRYEMIA GVLPIDRMTEHREAIQVVA++VPR VIE VY I+L
Sbjct: 361 ELMLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEHREAIQVVADKVPRRVIESVYNISL 420

Query: 421 PKPKPYEPQSRAPLASELLKAYCFSRGYVASSGLPDETRASRQILKDYVDGKIPHYEYPP 480
           PKPK YE QSR P A+ELLK+YC SRGYVASSGLPDET+A+R ILKDY+ GK+PHY  PP
Sbjct: 421 PKPKTYERQSRPPHAAELLKSYCASRGYVASSGLPDETKAARLILKDYIGGKLPHYAMPP 480

Query: 481 GMSSEDDIQDEDAATTRLSD-AHDSDSDDIEDSSDVDNENASGLEHVTEYLDSFDIANGL 540
           GM   D+   ED  T  L D    S+SDD     + +NE   G++ V + L SFD+ANGL
Sbjct: 481 GMPQADEPDIED--TQELEDILEGSESDDSAVGDETENEQVPGIDDVLDDLSSFDLANGL 540

Query: 541 -AKPSVTERKPKESHKHHKKPQRKKDRSWRVAN-HDGDGMPAMRVFQKPINSASL 592
            +   VT +K   SHK HKKPQRKKDR+WRV N  DGDGMP+++VFQKP N+  L
Sbjct: 541 KSSKKVTAKKQTASHKQHKKPQRKKDRTWRVQNTEDGDGMPSVKVFQKPANTGPL 586

[Close]

BLAST of CmaCh11G009100 vs. ExPASy Swiss-Prot
Match: Q9SHS8 (GTPase LSG1-1 OS=Arabidopsis thaliana OX=3702 GN=LSG1-1 PE=1 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 4.2e-192
Identity = 359/566 (63.43%), Postives = 434/566 (76.68%), Query Frame = 0


Query: 1   MGKNDKTGLGRALVKQHNQMIQQSKEKGRTYRSQHKKVLESVTEVSDIEAVIQQADEAER 60
           MGKN+KT LGRALVK HN MIQ++KEKG++Y+ QHKKVLESVTEVSDI+A+I+QA+EAER
Sbjct: 1   MGKNEKTSLGRALVKHHNHMIQETKEKGKSYKDQHKKVLESVTEVSDIDAIIEQAEEAER 60

Query: 61  LFSADH----PVPNVLIKMDGSSSTTGVTPEERREQQKMEEALHASSLRVPRRPPWNARM 120
           LF+  H    PVP   I MD  SS++G+T +E +EQ+  EEALHASSL+VPRRP W  +M
Sbjct: 61  LFAIHHDSATPVP---INMDTGSSSSGITAKEWKEQRMREEALHASSLQVPRRPHWTPKM 120

Query: 121 SAEELDDNERQSFLIWRRSLARLEENENLVLTPFEKNLDIWRQLWRVVERCDLLVMVVDA 180
           + E+LD NE+Q+FL WRR LA LEENE LVLTPFEKNLDIWRQLWRV+ER DL+VMVVDA
Sbjct: 121 NVEKLDANEKQAFLTWRRKLASLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDA 180

Query: 181 RDPLFYRCPDLEAYAKEVDEHKRTMLLVNKADLLPYSLRKKWSEFFSQNEILYLFWSAKA 240
           RDPLFYRCPDLEAYA+E+DEHK+TMLLVNKADLLP  +R+KW+E+FS+N IL++FWSAKA
Sbjct: 181 RDPLFYRCPDLEAYAQEIDEHKKTMLLVNKADLLPSYVREKWAEYFSRNNILFVFWSAKA 240

Query: 241 ASATLEGKKLSSRWNTDEPQDGLDDHDTKIYGRDELLARLQYEAEQIAEKRTTSSTSSTS 300
           A+ATLEGK L  +W   +     D+   K+YGRD+LL RL+ EA +I + R +   S+TS
Sbjct: 241 ATATLEGKPLKEQWRAPDTTQKTDNPAVKVYGRDDLLDRLKLEALEIVKMRKSRGVSATS 300

Query: 301 QSDNHSSGGNTNQRSSSSVMVGFVGYPNVGKSSTINALVGQKRAGVTSTPGKTKHFQTLI 360
            +++H             V+VGFVGYPNVGKSSTINALVGQKR GVTSTPGKTKHFQTLI
Sbjct: 301 -TESH----------CEQVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLI 360

Query: 361 ISEKLTLCDCPGLVFPSFSSSRYEMIAYGVLPIDRMTEHREAIQVVANRVPRHVIEGVYK 420
           ISE L LCDCPGLVFPSFSSSRYEM+A GVLPIDRMTEH EAI+VVA  VPRH IE VY 
Sbjct: 361 ISEDLMLCDCPGLVFPSFSSSRYEMVASGVLPIDRMTEHLEAIKVVAELVPRHAIEDVYN 420

Query: 421 INLPKPKPYEPQSRAPLASELLKAYCFSRGYVASSGLPDETRASRQILKDYVDGKIPHYE 480
           I+LPKPK YEPQSR PLASELL+ YC SRGYVASSGLPDETRA+RQILKDY++GK+PH+ 
Sbjct: 421 ISLPKPKSYEPQSRPPLASELLRTYCLSRGYVASSGLPDETRAARQILKDYIEGKLPHFA 480

Query: 481 YPPGMSSEDDIQDEDAATTRLSDAHDSDSDDIEDSSDVDNENASGLEHVTEYLDSFDIAN 540
            PP ++ +D  ++E A  T  ++  +    + +     +   + GL+ V + L SFD+AN
Sbjct: 481 MPPEITRDD--ENETADDTLGAETREGSQTEKKG----EEAPSLGLDQVLDDLSSFDLAN 537

Query: 541 GLAKPSVTERKPKESHKHHKKPQRKK 563
           GL              K HKK  RK+
Sbjct: 541 GLVSSKT---------KQHKKSHRKQ 537

[Close]

BLAST of CmaCh11G009100 vs. ExPASy Swiss-Prot
Match: Q6NY89 (Large subunit GTPase 1 homolog OS=Danio rerio OX=7955 GN=lsg1 PE=2 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.0e-92
Identity = 218/564 (38.65%), Postives = 305/564 (54.08%), Query Frame = 0


Query: 3   KNDKTGLGRALVKQHNQMIQQSKEKGRTYRSQH---------------KKVLESVTEVSD 62
           + + +GLGRAL+K+           GR YR                  +  L+SVTE S 
Sbjct: 7   RGEGSGLGRALIKER-------LNAGRGYRRNDTWLHTSELNDGYDWGRLNLQSVTEQSS 66

Query: 63  IEAVIQQADEAERLFSADHPVPNVLIKMDGSSSTTG-VTPEERREQQKMEEALHASSLRV 122
           ++  +  A+ A   F A+     + IK   + +  G ++ EE R  +K+ E  +   LR+
Sbjct: 67  LDDFLATAELAGTEFVAE----KLNIKFVPAEARAGLLSSEESRRLKKLHEE-NKQLLRI 126

Query: 123 PRRPPWNARMSAEELDDNERQSFLIWRRSLARLEENENLVLTPFEKNLDIWRQLWRVVER 182
           PRRPPW+   S E L   E+ SFL WRR LARLEE + L+LTPFE+NLD WRQLWRV+ER
Sbjct: 127 PRRPPWDESTSPEVLQQTEKDSFLTWRRDLARLEEEQKLILTPFERNLDFWRQLWRVIER 186

Query: 183 CDLLVMVVDARDPLFYRCPDLEAYAKEVDEHKRTMLLVNKADLLPYSLRKKWSEFFSQNE 242
            D++V +VDAR+PL +RCPDLE Y KEV  HK  MLL+NKADLL    R+ W+ +F +  
Sbjct: 187 SDVVVQIVDARNPLLFRCPDLEKYVKEVSVHKVNMLLLNKADLLTREQRRAWARYFQKEG 246

Query: 243 ILYLFWSAKAASATLEGKKLSS------------------------RWNTDEPQDGLDDH 302
           I  +FWSA A +  LE ++                             N+  P +  D++
Sbjct: 247 IRAVFWSALAEAQRLEAEERGEDAMDQEDQSDTEEETASKNATDHHEENSSSPNEEKDEN 306

Query: 303 --DTKIYGRDELLARLQYE-------------AEQIAEKRTTSSTSSTSQ-------SDN 362
             D +  G DE +   + E             AE+  E   TSS  ++S+        + 
Sbjct: 307 EQDEEEEGEDERICVDESEWQTCSEESGDEDHAEENPESTATSSFYNSSRLLRKNELLEM 366

Query: 363 HSSGGNTNQRSSSSVMVGFVGYPNVGKSSTINALVGQKRAGVTSTPGKTKHFQTLIISEK 422
             S  +        + VG VGYPNVGKSSTIN +   K+  V++TPG TKHFQTL +   
Sbjct: 367 FKSVHSGPTCKDGQITVGLVGYPNVGKSSTINTIFRNKKVSVSATPGHTKHFQTLFVEPG 426

Query: 423 LTLCDCPGLVFPSFSSSRYEMIAYGVLPIDRMTEHREAIQVVANRVPRHVIEGVYKINLP 482
           L LCDCPGLV PSF S++ EMI  G+LPID+M +H  AI +V   +PR+V+EG Y IN+ 
Sbjct: 427 LCLCDCPGLVMPSFVSTKAEMICSGILPIDQMRDHVPAISLVCQNIPRNVLEGTYGINII 486

Query: 483 KPKPYEPQSRAPLASELLKAYCFSRGYVASSGLPDETRASRQILKDYVDGKIPHYEYPPG 505
           +P+  E   R P   ELL AY + RG++ + G PD++R++R +LKDYV GK+ +   PP 
Sbjct: 487 RPREDEDPDRPPTYEELLMAYGYMRGFMTAHGQPDQSRSARYVLKDYVSGKLLYCHPPPH 546

[Close]

BLAST of CmaCh11G009100 vs. ExPASy Swiss-Prot
Match: Q2YDM7 (Large subunit GTPase 1 homolog OS=Bos taurus OX=9913 GN=LSG1 PE=2 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 7.7e-85
Identity = 221/646 (34.21%), Postives = 326/646 (50.46%), Query Frame = 0


Query: 9   LGRALVKQHNQMIQQSKEKGRTYRSQH-----------KKVLESVTEVSDIEAVIQQADE 68
           LGRAL++   Q +Q+S+    T    H           +  L+SVTE S ++  +  A+ 
Sbjct: 12  LGRALIR---QQVQRSRSHRHTDSWLHTSELNDGYDWGRLNLQSVTEQSSLDDFLATAEL 71

Query: 69  AERLFSADHPVPNVLIKMDGSSSTTGVTPEERREQQKMEEALHASSLRVPRRPPWNARMS 128
           A   F A+     + IK     + TG+   E  ++ K     +   L +PRRP W+ + S
Sbjct: 72  AGTEFVAE----KLNIKFVPPEARTGLLSFEENQRIKKLHEENKQFLCIPRRPKWDQKTS 131

Query: 129 AEELDDNERQSFLIWRRSLARLEENENLVLTPFEKNLDIWRQLWRVVERCDLLVMVVDAR 188
            EEL   E+ +FL WRR L  LEE +NL+LTPFE+NLD WRQLWRV+ER D++V +VDAR
Sbjct: 132 PEELKQAEKDNFLEWRRQLVWLEEEQNLILTPFERNLDFWRQLWRVIERSDIVVQIVDAR 191

Query: 189 DPLFYRCPDLEAYAKEVDEHKRTMLLVNKADLLPYSLRKKWSEFFSQNEILYLFWSAKAA 248
           +PL +RC DLE Y K +D++K  ++L+NKADLL    R  W+EFF +  +  +FWSA A 
Sbjct: 192 NPLLFRCEDLECYVKTIDDNKENVILINKADLLTAEQRSAWAEFFKKENVKVIFWSALAE 251

Query: 249 SATLEGKKL------SSRWNTDEPQDGLDDHDTKIYGRDELLA----------RLQYE-- 308
           +  L G         +    T E ++   D    ++   E L+            +YE  
Sbjct: 252 AIKLMGNSKGDVNGDTGEAITAEFENSSCDEAEILHKETEHLSLGEAASSEEDESEYEDC 311

Query: 309 AEQIAEKRTTSSTSSTSQS-------------DNHSSGGNTNQR---------------- 368
            E+  + +T    SS+S               D+ + G NT Q+                
Sbjct: 312 QEEEEDWQTCLEDSSSSDEEACGQDCKEGHTVDSEAQGRNTPQKRQIHNFSHLVSKQELL 371

Query: 369 ------------SSSSVMVGFVGYPNVGKSSTINALVGQKRAGVTSTPGKTKHFQTLIIS 428
                           + VG VGYPNVGKSSTIN ++G K+  V++TPG TKHFQTL + 
Sbjct: 372 EVFKQLHSGKKVKDGQLTVGLVGYPNVGKSSTINTILGNKKVSVSATPGHTKHFQTLYVE 431

Query: 429 EKLTLCDCPGLVFPSFSSSRYEMIAYGVLPIDRMTEHREAIQVVANRVPRHVIEGVYKIN 488
             L LCDCPGLV PSF S++ EMI  G+LPID+M +H   + +V   +PRHV+E  Y I+
Sbjct: 432 PGLCLCDCPGLVMPSFVSTKAEMICSGILPIDQMRDHVPPVSLVCQNIPRHVLEATYGID 491

Query: 489 LPKPKPYEPQSRAPLASELLKAYCFSRGYVASSGLPDETRASRQILKDYVDGKIPHYEYP 548
           + KP+  E   R P + ELL AY   RG++ + G PD+ R++R ILKDYV+GK+ +   P
Sbjct: 492 IIKPREDEDPRRPPTSEELLTAYGCMRGFMTAHGQPDQPRSARYILKDYVNGKLLYCHPP 551

Query: 549 PGMSS-----------EDDIQDEDAATTRLSDAHDSDSDDIEDSSDVDNENASGLEHVTE 572
           PG              E  +   +     + +      +++ D +    EN   L    +
Sbjct: 552 PGRDPVTFQYQHQRLLEKKVNGGEIKLQVVRNKKVYQIENVVDKAFFHQENVRALTKGVQ 611

[Close]

BLAST of CmaCh11G009100 vs. ExPASy Swiss-Prot
Match: P53145 (Large subunit GTPase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=LSG1 PE=1 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.3e-84
Identity = 204/500 (40.80%), Postives = 291/500 (58.20%), Query Frame = 0


Query: 5   DKTGLGRAL--VKQHNQMIQQSKEKGRTYRSQHKKV----LESVTEVSDIEAVIQQADEA 64
           +K  LGRA+   +Q    I+   +    + +   +     L SVT+ S ++  +  A  A
Sbjct: 25  NKLELGRAIKYARQKENAIEYLPDGEMRFTTDKHEANWVKLRSVTQESALDEFLSTAALA 84

Query: 65  ERLFSADHPVPNVLIKMD-GSSSTT----GVTPEERREQQKMEEALHASSLRVPRRPPWN 124
           ++ F+AD      +I+MD G+ S T     +T E+R      + AL A  L VPRRP WN
Sbjct: 85  DKDFTADRHSNVKIIRMDSGNDSATSQGFSMTNEQRGNLNAKQRAL-AKDLIVPRRPEWN 144

Query: 125 ARMSAEELDDNERQSFLIWRRSLARLEE-NENLVLTPFEKNLDIWRQLWRVVERCDLLVM 184
             MS  +LD  E+++FL WRR LA L+E NE+L+LTPFE+N+++W+QLWRVVER DL+V 
Sbjct: 145 EGMSKFQLDRQEKEAFLEWRRKLAHLQESNEDLLLTPFERNIEVWKQLWRVVERSDLVVQ 204

Query: 185 VVDARDPLFYRCPDLEAYAKEVDEHKRTMLLVNKADLLPYSLRKKWSEFFSQNEILYLFW 244
           +VDAR+PL +R  DLE Y KE D+ K  +LLVNKADLL    R  W+++F    I + F+
Sbjct: 205 IVDARNPLLFRSVDLERYVKESDDRKANLLLVNKADLLTKKQRIAWAKYFISKNISFTFY 264

Query: 245 SAKAASATLEGKKLSSRWNTDEPQDGLD----DHDTKIYGRDELLARLQYEAEQIAEKRT 304
           SA  A+  LE +K       ++  +  D    D D K+  + ++L+  Q E E    K  
Sbjct: 265 SALRANQLLEKQKEMGEDYREQDFEEADKEGFDADEKVMEKVKILSIDQLE-ELFLSKAP 324

Query: 305 TSSTSSTSQSDNHSSGGNTNQRSSSSVMVGFVGYPNVGKSSTINALVGQKRAGVTSTPGK 364
                                     + +G VGYPNVGKSSTIN+LVG K+  V+STPGK
Sbjct: 325 NEPLLPPLPG------------QPPLINIGLVGYPNVGKSSTINSLVGAKKVSVSSTPGK 384

Query: 365 TKHFQTLIISEKLTLCDCPGLVFPSFSSSRYEMIAYGVLPIDRMTEHREAIQVVANRVPR 424
           TKHFQT+ +S+ + LCDCPGLVFP+F+ ++ E++  GVLPID++ ++     +VA R+P+
Sbjct: 385 TKHFQTIKLSDSVMLCDCPGLVFPNFAYNKGELVCNGVLPIDQLRDYIGPAGLVAERIPK 444

Query: 425 HVIEGVYKINL-PKPKPYEPQSRAPLASELLKAYCFSRGYVASS-GLPDETRASRQILKD 484
           + IE +Y I++  K +        P A ELL AY  +RGY+    G  DE RASR ILKD
Sbjct: 445 YYIEAIYGIHIQTKSRDEGGNGDIPTAQELLVAYARARGYMTQGYGSADEPRASRYILKD 504

Query: 485 YVDGKIPHYEYPPGMSSEDD 487
           YV+GK+ +   PP +  EDD
Sbjct: 505 YVNGKLLYVNPPPHL--EDD 508

[Close]

BLAST of CmaCh11G009100 vs. TAIR 10
Match: AT1G08410.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 735.3 bits (1897), Expect = 3.8e-212
Identity = 391/595 (65.71%), Postives = 465/595 (78.15%), Query Frame = 0


Query: 1   MGKNDKTGLGRALVKQHNQMIQQSKEKGRTYRSQHKKVLESVTEVSDIEAVIQQADEAER 60
           MGK++KT LGR+LVK HN MIQ+SK+KG+ Y++  KKVLESVTEVSDI+A+I+QA+EAER
Sbjct: 1   MGKSEKTSLGRSLVKHHNHMIQESKDKGKYYKNLQKKVLESVTEVSDIDAIIEQAEEAER 60

Query: 61  LFSADHPVPNVL-IKMDGSSSTTGVTPEERREQQKMEEALHASSLRVPRRPPWNARMSAE 120
           L++ +H     L I +D +SS++ +  EE REQQK+EEALHASSL+VPRRPPW   MS E
Sbjct: 61  LYTINHSSSTPLSINLDTNSSSSVIAAEEWREQQKIEEALHASSLQVPRRPPWTPEMSVE 120

Query: 121 ELDDNERQSFLIWRRSLARLEENENLVLTPFEKNLDIWRQLWRVVERCDLLVMVVDARDP 180
           ELD NE+Q+FL WRR L  LEENE LVLTPFEKNLDIWRQLWRV+ER DL+VMVVDARDP
Sbjct: 121 ELDANEKQAFLNWRRMLVSLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDARDP 180

Query: 181 LFYRCPDLEAYAKEVDEHKRTMLLVNKADLLPYSLRKKWSEFFSQNEILYLFWSAKAASA 240
           LFYRCPDLEAYA+E+DEHK+ MLLVNKADLLP  +R+KW+E+F  N IL++FWSA AA+A
Sbjct: 181 LFYRCPDLEAYAQEIDEHKKIMLLVNKADLLPTDVREKWAEYFRLNNILFVFWSAIAATA 240

Query: 241 TLEGKKLSSRWNTDEPQDGLDDHDTKIYGRDELLARLQYEAEQIAEKRTTSSTSSTSQSD 300
           TLEGK L  +W   +     DD D  IYGRDELL+RLQ+EA++I + R + + S +SQS 
Sbjct: 241 TLEGKVLKEQWRQPDNLQKTDDPDIMIYGRDELLSRLQFEAQEIVKVRNSRAASVSSQS- 300

Query: 301 NHSSGGNTNQRSSSSVMVGFVGYPNVGKSSTINALVGQKRAGVTSTPGKTKHFQTLIISE 360
                  T +      +VGFVGYPNVGKSSTINALVGQKR GVTSTPGKTKHFQTLIIS+
Sbjct: 301 ------WTGEYQRDQAVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISD 360

Query: 361 KLTLCDCPGLVFPSFSSSRYEMIAYGVLPIDRMTEHREAIQVVANRVPRHVIEGVYKINL 420
           +L LCDCPGLVFPSFSSSRYEMIA GVLPIDRMTEHREAIQVVA++VPR VIE VY I+L
Sbjct: 361 ELMLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEHREAIQVVADKVPRRVIESVYNISL 420

Query: 421 PKPKPYEPQSRAPLASELLKAYCFSRGYVASSGLPDETRASRQILKDYVDGKIPHYEYPP 480
           PKPK YE QSR P A+ELLK+YC SRGYVASSGLPDET+A+R ILKDY+ GK+PHY  PP
Sbjct: 421 PKPKTYERQSRPPHAAELLKSYCASRGYVASSGLPDETKAARLILKDYIGGKLPHYAMPP 480

Query: 481 GMSSEDDIQDEDAATTRLSD-AHDSDSDDIEDSSDVDNENASGLEHVTEYLDSFDIANGL 540
           GM   D+   ED  T  L D    S+SDD     + +NE   G++ V + L SFD+ANGL
Sbjct: 481 GMPQADEPDIED--TQELEDILEGSESDDSAVGDETENEQVPGIDDVLDDLSSFDLANGL 540

Query: 541 -AKPSVTERKPKESHKHHKKPQRKKDRSWRVAN-HDGDGMPAMRVFQKPINSASL 592
            +   VT +K   SHK HKKPQRKKDR+WRV N  DGDGMP+++VFQKP N+  L
Sbjct: 541 KSSKKVTAKKQTASHKQHKKPQRKKDRTWRVQNTEDGDGMPSVKVFQKPANTGPL 586

[Close]

BLAST of CmaCh11G009100 vs. TAIR 10
Match: AT2G27200.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 672.5 bits (1734), Expect = 3.0e-193
Identity = 359/566 (63.43%), Postives = 434/566 (76.68%), Query Frame = 0


Query: 1   MGKNDKTGLGRALVKQHNQMIQQSKEKGRTYRSQHKKVLESVTEVSDIEAVIQQADEAER 60
           MGKN+KT LGRALVK HN MIQ++KEKG++Y+ QHKKVLESVTEVSDI+A+I+QA+EAER
Sbjct: 1   MGKNEKTSLGRALVKHHNHMIQETKEKGKSYKDQHKKVLESVTEVSDIDAIIEQAEEAER 60

Query: 61  LFSADH----PVPNVLIKMDGSSSTTGVTPEERREQQKMEEALHASSLRVPRRPPWNARM 120
           LF+  H    PVP   I MD  SS++G+T +E +EQ+  EEALHASSL+VPRRP W  +M
Sbjct: 61  LFAIHHDSATPVP---INMDTGSSSSGITAKEWKEQRMREEALHASSLQVPRRPHWTPKM 120

Query: 121 SAEELDDNERQSFLIWRRSLARLEENENLVLTPFEKNLDIWRQLWRVVERCDLLVMVVDA 180
           + E+LD NE+Q+FL WRR LA LEENE LVLTPFEKNLDIWRQLWRV+ER DL+VMVVDA
Sbjct: 121 NVEKLDANEKQAFLTWRRKLASLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDA 180

Query: 181 RDPLFYRCPDLEAYAKEVDEHKRTMLLVNKADLLPYSLRKKWSEFFSQNEILYLFWSAKA 240
           RDPLFYRCPDLEAYA+E+DEHK+TMLLVNKADLLP  +R+KW+E+FS+N IL++FWSAKA
Sbjct: 181 RDPLFYRCPDLEAYAQEIDEHKKTMLLVNKADLLPSYVREKWAEYFSRNNILFVFWSAKA 240

Query: 241 ASATLEGKKLSSRWNTDEPQDGLDDHDTKIYGRDELLARLQYEAEQIAEKRTTSSTSSTS 300
           A+ATLEGK L  +W   +     D+   K+YGRD+LL RL+ EA +I + R +   S+TS
Sbjct: 241 ATATLEGKPLKEQWRAPDTTQKTDNPAVKVYGRDDLLDRLKLEALEIVKMRKSRGVSATS 300

Query: 301 QSDNHSSGGNTNQRSSSSVMVGFVGYPNVGKSSTINALVGQKRAGVTSTPGKTKHFQTLI 360
            +++H             V+VGFVGYPNVGKSSTINALVGQKR GVTSTPGKTKHFQTLI
Sbjct: 301 -TESH----------CEQVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLI 360

Query: 361 ISEKLTLCDCPGLVFPSFSSSRYEMIAYGVLPIDRMTEHREAIQVVANRVPRHVIEGVYK 420
           ISE L LCDCPGLVFPSFSSSRYEM+A GVLPIDRMTEH EAI+VVA  VPRH IE VY 
Sbjct: 361 ISEDLMLCDCPGLVFPSFSSSRYEMVASGVLPIDRMTEHLEAIKVVAELVPRHAIEDVYN 420

Query: 421 INLPKPKPYEPQSRAPLASELLKAYCFSRGYVASSGLPDETRASRQILKDYVDGKIPHYE 480
           I+LPKPK YEPQSR PLASELL+ YC SRGYVASSGLPDETRA+RQILKDY++GK+PH+ 
Sbjct: 421 ISLPKPKSYEPQSRPPLASELLRTYCLSRGYVASSGLPDETRAARQILKDYIEGKLPHFA 480

Query: 481 YPPGMSSEDDIQDEDAATTRLSDAHDSDSDDIEDSSDVDNENASGLEHVTEYLDSFDIAN 540
            PP ++ +D  ++E A  T  ++  +    + +     +   + GL+ V + L SFD+AN
Sbjct: 481 MPPEITRDD--ENETADDTLGAETREGSQTEKKG----EEAPSLGLDQVLDDLSSFDLAN 537

Query: 541 GLAKPSVTERKPKESHKHHKKPQRKK 563
           GL              K HKK  RK+
Sbjct: 541 GLVSSKT---------KQHKKSHRKQ 537

[Close]

BLAST of CmaCh11G009100 vs. TAIR 10
Match: AT1G52980.1 (GTP-binding family protein )

HSP 1 Score: 134.4 bits (337), Expect = 3.0e-31
Identity = 100/345 (28.99%), Postives = 158/345 (45.80%), Query Frame = 0


Query: 148 TPFEKNLD--IWRQLWRVVERCDLLVMVVDARDPLFYRCPDLEAYAKEVDEHKRTMLLVN 207
           T FEK     IW +L++V++  D++V V+DARDP   RC  LE   KE  +HK  +LL+N
Sbjct: 195 TMFEKGQSKRIWGELYKVIDSSDVIVQVIDARDPQGTRCHHLEKTLKEHHKHKHMILLLN 254

Query: 208 KADLLPYSLRKKWSEFFSQNEILYLFWSAKAASATLEGKKLSSRWNTDEPQDGLDDHDTK 267
           K DL+P    K W    S+      F ++                              K
Sbjct: 255 KCDLVPAWATKGWLRVLSKEYPTLAFHASV----------------------------NK 314

Query: 268 IYGRDELLARLQYEAEQIAEKRTTSSTSSTSQSDNHSSGGNTNQRSSSSVMVGFVGYPNV 327
            +G+  LL+ L+  A   ++K+                          ++ VGFVGYPNV
Sbjct: 315 SFGKGSLLSVLRQFARLKSDKQ--------------------------AISVGFVGYPNV 374

Query: 328 GKSSTINALVGQKRAGVTSTPGKTKHFQTLIISEKLTLCDCPGLVFPSFSSSRYEMIAYG 387
           GKSS IN L  +    V   PG+TK +Q + +++++ L DCPG+V+ S   +  +++  G
Sbjct: 375 GKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQS-RDTETDIVLKG 434

Query: 388 VLPIDRMTEHREAIQVVANRVPRHVIEGVYKINLPKPKPYEPQSRAPLASELLKAYCFSR 447
           V+ +  + +  E I  V  RV +  ++  YKI     K +E         + L   C S 
Sbjct: 435 VVRVTNLEDASEHIGEVLRRVKKEHLQRAYKI-----KDWEDD------HDFLLQLCKSS 473

Query: 448 GYVASSGLPDETRASRQILKDYVDGKIPHYEYPP---GMSSEDDI 488
           G +   G PD    ++ IL D+  G+IP +  PP    ++SE ++
Sbjct: 495 GKLLKGGEPDLMTGAKMILHDWQRGRIPFFVPPPKLDNVASESEV 473

[Close]

BLAST of CmaCh11G009100 vs. TAIR 10
Match: AT3G07050.1 (GTP-binding family protein )

HSP 1 Score: 112.5 bits (280), Expect = 1.2e-24
Identity = 97/369 (26.29%), Postives = 164/369 (44.44%), Query Frame = 0


Query: 157 WRQLWRVVERCDLLVMVVDARDPLFYRCPDLEAYAKEVDEHKRTMLLVNKADLLPYSLRK 216
           +++L +V+E  D+++ V+DARDPL  RC D+E    +   +K  +LL+NK DL+P    +
Sbjct: 127 YKELVKVIELSDVILEVLDARDPLGTRCTDMERMVMQAGPNKHLVLLLNKIDLVPREAAE 186

Query: 217 KWSEFFSQNEILYLFWSAKAASATLEGKKLSSRWNT---DEPQDGLDDHDTKIYGRDELL 276
           KW  +  +       + A A   + + ++ +  W +    +P + L   D    G D L+
Sbjct: 187 KWLMYLREE------FPAVAFKCSTQEQRSNLGWKSSKASKPSNMLQTSD--CLGADTLI 246

Query: 277 ARLQYEAEQIAEKRTTSSTSSTSQSDNHSSGGNTNQRSSSSVMVGFVGYPNVGKSSTINA 336
             L+                      N+S     +     S+ VG +G PNVGKSS IN+
Sbjct: 247 KLLK----------------------NYS----RSHELKKSITVGIIGLPNVGKSSLINS 306

Query: 337 LVGQKRAGVTSTPGKTKHFQTLIISEKLTLCDCPGLVFPSFSSSRYEMIAYGVLPIDRMT 396
           L       V +TPG T+  Q + + + + L DCPG+V    S +   +       I+++ 
Sbjct: 307 LKRAHVVNVGATPGLTRSLQEVHLDKNVKLLDCPGVVMLKSSGNDASIALRNCKRIEKLD 366

Query: 397 EHREAIQVVANRVPRHVIEGVYKINLPKPKPYEPQSRAPLASELLKAYCFSRGYVASSGL 456
           +    ++ +    P+ ++  +YKI         P   A    + L      RG +   GL
Sbjct: 367 DPVSPVKEILKLCPKDMLVTLYKI---------PSFEA--VDDFLYKVATVRGKLKKGGL 426

Query: 457 PDETRASRQILKDYVDGKIPHYEYPP----GMSSEDDIQDEDAATTRLSDAHDSDSDDIE 516
            D   A+R +L D+ +GKIP+Y  PP    G  +E  I  E A    + + +  +S  I 
Sbjct: 427 VDIDAAARIVLHDWNEGKIPYYTMPPKRDQGGHAESKIVTELAKDFNIDEVYSGESSFIG 450

Query: 517 DSSDVDNEN 519
               V+  N
Sbjct: 487 SLKTVNEFN 450

[Close]

BLAST of CmaCh11G009100 vs. TAIR 10
Match: AT4G02790.1 (GTP-binding family protein )

HSP 1 Score: 59.3 bits (142), Expect = 1.2e-08
Identity = 50/217 (23.04%), Postives = 89/217 (41.01%), Query Frame = 0


Query: 158 RQLWRVVERCDLLVMVVDARDPLFYRCPDLEAYAKEVDEHKRTMLLVNKADLLPYSLRKK 217
           ++L   ++  D+++ V DAR PL    P ++A+      +++ +L++N+ D++    R  
Sbjct: 108 KELREQLKLMDVVIEVRDARIPLSTTHPKMDAWL----GNRKRILVLNREDMISNDDRND 167

Query: 218 WSEFFSQNEILYLFWSAKAASATLE----GKKLSSRWNTDEPQDGLDDHDTKIYGRDELL 277
           W+ +F++  I  +F + K     ++     K L+   N    + G             LL
Sbjct: 168 WARYFAKQGIKVIFTNGKLGMGAMKLGRLAKSLAGDVNGKRREKG-------------LL 227

Query: 278 ARLQYEAEQIAEKRTTSSTSSTSQSDNHSSGGNTNQRSSSSVMVGFVGYPNVGKSSTINA 337
            R                                      SV  G +GYPNVGKSS IN 
Sbjct: 228 PR--------------------------------------SVRAGIIGYPNVGKSSLINR 269

Query: 338 LVGQKRAGVTSTPGKTKHFQTLIISEKLTLCDCPGLV 371
           L+ +K       PG T+  + + + + L L D PG++
Sbjct: 288 LLKRKICAAAPRPGVTREMKWVKLGKDLDLLDSPGML 269

The following BLAST results are available for this feature:

BLAST of CmaCh11G009100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJF1	5.3e-211	65.71	GTPase LSG1-2 OS=Arabidopsis thaliana OX=3702 GN=LSG1-2 PE=1 SV=1	[more]
Q9SHS8	4.2e-192	63.43	GTPase LSG1-1 OS=Arabidopsis thaliana OX=3702 GN=LSG1-1 PE=1 SV=1	[more]
Q6NY89	1.0e-92	38.65	Large subunit GTPase 1 homolog OS=Danio rerio OX=7955 GN=lsg1 PE=2 SV=1	[more]
Q2YDM7	7.7e-85	34.21	Large subunit GTPase 1 homolog OS=Bos taurus OX=9913 GN=LSG1 PE=2 SV=1	[more]
P53145	1.3e-84	40.80	Large subunit GTPase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ...	[more]

BLAST of CmaCh11G009100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08410.1	3.8e-212	65.71	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G27200.1	3.0e-193	63.43	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G52980.1	3.0e-31	28.99	GTP-binding family protein	[more]
AT3G07050.1	1.2e-24	26.29	GTP-binding family protein	[more]
AT4G02790.1	1.2e-08	23.04	GTP-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006073	GTP binding domain	PRINTS	PR00326	GTP1OBG	coord: 317..337 score: 49.34 coord: 363..378 score: 24.46
IPR006073	GTP binding domain	PFAM	PF01926	MMR_HSR1	coord: 317..377 e-value: 3.6E-15 score: 56.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 156..373 e-value: 7.4E-46 score: 158.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 155..442
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 549..564
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 539..595
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 247..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 245..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 491..517
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..312
None	No IPR available	PANTHER	PTHR45709:SF4	GTPASE LSG1-1	coord: 1..561
None	No IPR available	CDD	cd01857	HSR1_MMR1	coord: 156..372 e-value: 2.95588E-74 score: 231.352
IPR043358	Ras GTPase GNL1-like	PANTHER	PTHR45709	LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED	coord: 1..561
IPR030378	Circularly permuted (CP)-type guanine nucleotide-binding (G) domain	PROSITE	PS51721	G_CP	coord: 157..372 score: 36.051624

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G009100.1	CmaCh11G009100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding