CmaCh11G006700 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G006700
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Meiotic nuclear division protein 1 homolog
Location	Cma_Chr11: 3241845 .. 3246963 (-)
RNA-Seq Expression	CmaCh11G006700
Synteny	CmaCh11G006700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGAGCTCCTTGCTGTGACAAAGCCACTGTCAAGAGAGGCCCATGGTCTCCTCAAGAAGACGCCACTCTCAAAGCCTTCATTCATAAACATGGCACTGCTGGCAACTGGATCGCTCTCCCTCGCAAAGCTGGTTTTTTTTTCCTCTTCTTTTTCTCTTCGTCTTACACAAGTTTGTTATTGTTTAACCGGTTGCCCGGCCTGTTTCGTGTTTCTCCGCATAGGACTTAACCGCTGTGGCAAGAGCTGTCGTCTCAGGTGGCTGAATTATCTCCGACCAGACATCAAACATGGTGGCTTTACCCTCGAGGAAGACAACCTTATTTGTACCCTCTATTCCACTCTGGGAAGTAGGCAAGTGAAACAAAGTATTCTTTAGGGTTAGGTTTTATTATTTGATTTAATTATTTGAATTAGATTTTAAATAGTCCTACTAAATTTATTTTCAATATATTATGTAAAGCTATATATTAGCCAATTTCAAATTGTGATATTTCTCTTCTAATCTTTTTTAAGAAGGTAAGAGGGATGATATCATTTTTTTTAAAATTCAGGTGGGCTGTTATTGCATCACAATTACCGGGAAGAACCGATAACGATGTAAAAAACCACTGGAATACGAAGCTGAAGAAGAAATTCAATTCATTTTCCGAACGGTCAGCTCCCACAATCGCCGCCGTAACCCAGCAGAATGCGATTACCAACATGGCATTTCCAGCCAACGCGCCGCCGTATTCCGCTGCTGCAGATTGGTTACGATTCGATGAACAAATGGACGGAAACTTGATGTTTGCAGATGCTAATTTTGATTTCAAGCACGACCCAGAAGATCAATTCCCGATGTTGTGGAACCCACAAGAATTATCCACTTCCTCGTCTAATTCTTCGCTACCTGTAGAGCAAAACCAGGTCCCATTTGGTGGGAACGACGGCGAAACTGTACTGAGTTATGGGTTTTATCAATACCCATATGGAGATGTAATGGAAGGATTGGATTTCAAGTAAGATGGGATGAATTAAGGTTTAATTAAGGAGTTAATTAGGATTGATTATGGTAATTAATTAGAGTGGGAGGACTTGGTCAAGAAAGGACATGTTGTGTTGTTAGAGTTTGTTTGAATATCATATGGTTTCATTTGATGAAGTCAGCGAAGACTTTGTTTGTTTCTGACTCGTCAGTGCTCACAAATCTTGTGTTTGTTAAAGCTTAGAATTTCTTTTTATTTATTTATTTTAATTTGACTACAAGCTCAAAATGTCCATGTTTCCCTTTTGTTTTTTTTTTCTCCTTCATAATATTAGTAATATTCAACGTGGAATTGATATTTGATTGAATGTTTATAGTCGATATTAGAATATAGTCTTAAATGAATAAAGTAGATAAGACAACTTTATTAGACATGTCTTTGTGCATTAATTACTAGATATGTTCATTTTCCTTGTAGAGTCTAAATAGAGAGGGATTCCCCGTCTAGACAGGAAATTGAGGAGGCAGTGGGTAACATTTTTTCTCAAATGGGCTTAGTGTCTAGGTTTGATACTATTTGTAACGACCAAAGTCAATTGCTAGTAAATATTGAATCCCTAATGAGGTGAACACTAGGCAGTGTGCTAATTGGGACATTATGCCTTGAAGGAAGGTAGATGGTGAGATACACATCAATTGGAGAACTTGTAATGAAAAGACAAAGAATAATATATGCAAGAGGTAGACTTGGGTCGTTTGCAAATATTTAAAAGTTTTTTAGACCAAAATGTATTTTTATTGATTTAGTTTAACAAAAAAAAAAAAAAAAAAAAGATGAACTTTAAATTTTATTAGAACATAAAAGATATTTTTTCTGAAGTCCGAATGAGCAACAAATGAAAACTTCCCGCCTTGCCAAACGGCTTCACTCTTCCCGCATTTCTCTAGAGCCTTCTCCGACACTCTTAATCTTAGGAGGATCAATGGTAACGTTTCTCCTCAAACCCTAATTTACTAATTCTTTTTCATCTTTCATAGCAGTATATGCCTTTTCTTCAAGTTCGTTTATTAGCATTCGTTCATGTAAAATAGTTGCGATTGTCTGCATGACCTAAAATTCAACGAATTAATAGTATTAGATCATGGTCTATGAAAATCTTCCGTCACGCTCGAAATTCGTTGATTTCCGCTCAGAATAAGCTACAATCTTCGATCAGGTGTTGTTCTTTTCTTTCGTGTTTGACAGGTTCATTTTCCTTAACTGCCTGCAGAAAGATTAGCGTTGGAGTGATTTTGATCATTATCGATGATCGGTTTATGATATGTAGTTTAAGGGGTAAATGTTGTCCAATGTGTTATCTGAAAATGAGTTTTATTCGCTTGTTAACCAGCATTTTGCCAAACGGATCCTTCACTATTAATTAAGAAGGATTCTTCTTCTAATAAAATTTCGGGATTTTCTGGTTTTAATAAGGCTTACTCAATTGCTACTGTGGACTTGTTGTTAGGGCTCGTACTACTCTCCGCTTCATGATATTAACAAAATAAATTGTTTGTGATCTAACATTGGTGCACTTCCTGGAATTTAATTTAAGCAACAGTCTAAGAAAATAGGCCTTTCACTGGAAGAGAAGCGTTAGAAGATGCTTCCGTTGTTTTACGAGTCTCAAGACTTTTTCCTTGTGCGTACACTTGCATTTTTATTCCTGAATTTGGATGTCCCGTGATTTCATTTTCTGCTGCTGTTTGATTAGAAGGATTTCATATTTTCGCGACAGTATATCCTTTTTACTTCATTATTTATAAGAAGCCATTTTTTTTTTTTTTGAGTTTCAGCTTAAGGAGCTTGAAAAGCTGGGTCCTAGGAAAGGTGTGATTTCTCAGTCAGTGAAAGATGTTGTGCAAAGTTTAGTGGATGATGACCTTGTTTCAAAAGAGAAGATTGGAACTTCAGTGAGTTATAGTTTTGAGATGAAATCTTCAGTCATCCATTATTTTGTTTATCCTGTTTGCATCGCGACATTATTGTTTGCATATGGGTCACAGCCTTTAGACACTATAGTCTCTCGTGCTTTGTGAATGTGATTTTCAATTTGAGTATACATTTTGTGATTGGTTTTGTAACTTCAGGTCACCAAGCTGTGCTGGTAATCAGGTGAAGTCTACATCATTCTTATCATTACTTCCCGTACTCACTTCAGACGCTTGGTATTTATGATGTCCAAGCTCACTCTAAATTTTAAACCATTTAAATGTTCATTGATTTTTTACTTCCAAAAATGTCGCATGTCTCTATTCTTTCCAGCTGAGGAATGTGTATCTTAAACTCGAACTGATCTCCAAACCAGTAAGAACAGACTGGAAGAACTTACTCAGCAGAGTAATGCATTAAAGAAGGGAAGAGAGGAATCTGTGAGTGATTATACTTTAAGCGAAAGGTAAATTATGAAAATTAGTTCCCTCTAGGTCATGAATGATTTCTTTATGTCAGGGTGAACGTGAGGAAGCCCTAGCTGAATTGAAAGCCATTGAACAGCACAAAGAGCTAAAGGTTTTGCTTGTATTCTGAATTTTATTTATTTATTTGTAAAAAAAAATCAATTCCGATGATCTTTTTCGTTTTCACATGAATTTAACAATCTAGTCACTCTCAGGATGAGATGATACAGTATGCAGATAATGATCCAGCTGCCTTTGAGACAATGAGTTGAGTTTCTTTTGCATGTTTTCGATTTATATGATAGAAAATGGGTATCAGCTGCTTAACTCTTGATATCGCTGTGCTAAACTTGAAGTTAATGGTTGTGTGAATTCGACAGAAAATGCAATTGAAGATGCGCATGCTGCAGCCAACCGATGGACAGGTATGCATTCTGCACATAAGCTGCCAACAAGTTTTCAATGTTTTCCCTTGTTTCTCGCGTGCCCACTTGTAATTTCTTTCGAAACTCTGTTAATTGCACGCAGACAACATTTTCACTTTGCGACAATGGTGTTCAAACAACTTTCCACAAGCCAAAGAACAACTAGAGAACCTGTACAAAGAGGTAAAGCACAAAAAAATGCCCTCTGCAAGAATTAGCGATATGCTAAAATAGCACGCACGTAAAGTTTCTTATCTTCAACCTTTTATAAAACATTCTTTCCACAGTTTTGAAAGGACAAGAAAGTAACTTATTACTTCCCACTTTCAACCTTCAAACATTTATCACCTCCAAAGGACGTTTGCATGTATCTTGTTAAGAACTCTCCGAGTTATCGGTTGTGTAAATGCAGGTTGGTATGACGGACGATTTTTGATTATTTGGAGTTGTCATCAGCCCCTCTTGAGGTCAGTCGTGAATTAAGAGGCTAGAAGCTCCAAGCTGATTCAACCATATGCTTTATATGTCTCAATGATTCTGCGGCAACCGTTATAGATCATGGGTAAGAGTTTGTGTCACCTGAAATTCACCCATCATATATAGAGCTTCCCTGTTCATTCATTATACGTGGTAAATAAGAAACCTGTCAATTCTTAAATCAATTTAGTTCCGTTCCCAGATCACTCGAATATTGGATTCATGGCTCTCATGAATCTGTAATTTGTTTATAAGCATGGGATAAGTGAATTTGTTGTATGTATTGGAATGAATTCCTGTCTTTCGAGCTATATGTCCGAGTTTACGGAATTCTTGTGTAATCCGTAGTAAATAACCAACACAAACTCAAAGCATGGATTTTCAAAAAACCAACTCAAACTTAAACTTAACACATGGTCTCTTTGTGTAACTGAGACACTTAACCCGTCAGCTCCATATTAGGTCAATACTAACCACAGGAATGGTATATTCATTTACAGAATATACAGGACCAAAAATAAAATTGCATTATTATCTGGTAATGTCACAAAGAAACCTGTTGATCAGGCTTTGCTGAACTTGGCAAAAAATGCTCAAATCTTTGGTACATCCTCGGGCCAATTCTTCATATAGCGTCTCTCTTCGAATGTTAATCATGCTTACGCCACCTGCATAATTCCATAAAAAAACATTTTAGCCTTGACAGCCTTGACAGCCTTGTAGCTGCTCTAGATGCAAAGTTGGGTACTGCACAAATTTTGTTGGGACAAGCATGCAGGATATTCATTTCATAGGCTTAGAACGGTAG

mRNA sequence

ATGGGAAGAGCTCCTTGCTGTGACAAAGCCACTGTCAAGAGAGGCCCATGGTCTCCTCAAGAAGACGCCACTCTCAAAGCCTTCATTCATAAACATGGCACTGCTGGCAACTGGATCGCTCTCCCTCGCAAAGCTGGACTTAACCGCTGTGGCAAGAGCTGTCGTCTCAGGTGGCTGAATTATCTCCGACCAGACATCAAACATGGTGGCTTTACCCTCGAGGAAGACAACCTTATTTGTACCCTCTATTCCACTCTGGGAAGTAGGCAAGTGAAACAAACTCCCACAATCGCCGCCGTAACCCAGCAGAATGCGATTACCAACATGGCATTTCCAGCCAACGCGCCGCCGTATTCCGCTGCTGCAGATTGGTTACGATTCGATGAACAAATGGACGGAAACTTGATGTTTGCAGATGCTAATTTTGATTTCAAGCACGACCCAGAAGATCAATTCCCGATGTTGTGGAACCCACAAGAATTATCCACTTCCTCGTCTAATTCTTCGCTACCTGTAGAGCAAAACCAGGTCCCATTTGGTGGGAACGACGGCGAAACTGTACTGAGTTATGGGTTTTATCAATACCCATATGGAGATGTAATGGAAGGATTGGATTTCAAAGCCTTCTCCGACACTCTTAATCTTAGGAGGATCAATGCAGTATATGCCTTTTCTTCAAGTTCGTTTATTAGCATTCGTTCATGTTCATTTTCCTTAACTGCCTGCAGAAAGATTAGCGTTGGAGTGATTTTGATCATTATCGATGATCGGTTTATGATATGTAGTTTAAGGGAAGGATTTCATATTTTCGCGACATTTCAGCTTAAGGAGCTTGAAAAGCTGGGTCCTAGGAAAGGTGTGATTTCTCAGTCAGTGAAAGATGTTGTGCAAAGTTTAGTGGATGATGACCTTGTTTCAAAAGAGAAGATTGGAACTTCAGTGAGTTATAGTTTTGAGATGAAATCTTCAGTCATCCATTATTTTGTTTATCCTGTTTGCATCGCGACATTATTGTTTGCATATGGGTCACAGCCTTTAGACACTATAGTCTCTCGTGCTTTGTCACCAAGCTGTGCTGGTAATCAGGTGAAGTCTACATCATTCTTATCATTACTTCCCGTACTCACTTCAGACGCTTGTAAGAACAGACTGGAAGAACTTACTCAGCAGAGTAATGCATTAAAGAAGGGAAGAGAGGAATCTGGTGAACGTGAGGAAGCCCTAGCTGAATTGAAAGCCATTGAACAGCACAAAGAGCTAAAGGATGAGATGATACAGTATGCAGATAATGATCCAGCTGCCTTTGAGACAATGATTAATGGTTGTGTGAATTCGACAGAAAATGCAATTGAAGATGCGCATGCTGCAGCCAACCGATGGACAGACAACATTTTCACTTTGCGACAATGGTGTTCAAACAACTTTCCACAAGCCAAAGAACAACTAGAGAACCTGTACAAAGAGGATATTCATTTCATAGGCTTAGAACGGTAG

Coding sequence (CDS)

ATGGGAAGAGCTCCTTGCTGTGACAAAGCCACTGTCAAGAGAGGCCCATGGTCTCCTCAAGAAGACGCCACTCTCAAAGCCTTCATTCATAAACATGGCACTGCTGGCAACTGGATCGCTCTCCCTCGCAAAGCTGGACTTAACCGCTGTGGCAAGAGCTGTCGTCTCAGGTGGCTGAATTATCTCCGACCAGACATCAAACATGGTGGCTTTACCCTCGAGGAAGACAACCTTATTTGTACCCTCTATTCCACTCTGGGAAGTAGGCAAGTGAAACAAACTCCCACAATCGCCGCCGTAACCCAGCAGAATGCGATTACCAACATGGCATTTCCAGCCAACGCGCCGCCGTATTCCGCTGCTGCAGATTGGTTACGATTCGATGAACAAATGGACGGAAACTTGATGTTTGCAGATGCTAATTTTGATTTCAAGCACGACCCAGAAGATCAATTCCCGATGTTGTGGAACCCACAAGAATTATCCACTTCCTCGTCTAATTCTTCGCTACCTGTAGAGCAAAACCAGGTCCCATTTGGTGGGAACGACGGCGAAACTGTACTGAGTTATGGGTTTTATCAATACCCATATGGAGATGTAATGGAAGGATTGGATTTCAAAGCCTTCTCCGACACTCTTAATCTTAGGAGGATCAATGCAGTATATGCCTTTTCTTCAAGTTCGTTTATTAGCATTCGTTCATGTTCATTTTCCTTAACTGCCTGCAGAAAGATTAGCGTTGGAGTGATTTTGATCATTATCGATGATCGGTTTATGATATGTAGTTTAAGGGAAGGATTTCATATTTTCGCGACATTTCAGCTTAAGGAGCTTGAAAAGCTGGGTCCTAGGAAAGGTGTGATTTCTCAGTCAGTGAAAGATGTTGTGCAAAGTTTAGTGGATGATGACCTTGTTTCAAAAGAGAAGATTGGAACTTCAGTGAGTTATAGTTTTGAGATGAAATCTTCAGTCATCCATTATTTTGTTTATCCTGTTTGCATCGCGACATTATTGTTTGCATATGGGTCACAGCCTTTAGACACTATAGTCTCTCGTGCTTTGTCACCAAGCTGTGCTGGTAATCAGGTGAAGTCTACATCATTCTTATCATTACTTCCCGTACTCACTTCAGACGCTTGTAAGAACAGACTGGAAGAACTTACTCAGCAGAGTAATGCATTAAAGAAGGGAAGAGAGGAATCTGGTGAACGTGAGGAAGCCCTAGCTGAATTGAAAGCCATTGAACAGCACAAAGAGCTAAAGGATGAGATGATACAGTATGCAGATAATGATCCAGCTGCCTTTGAGACAATGATTAATGGTTGTGTGAATTCGACAGAAAATGCAATTGAAGATGCGCATGCTGCAGCCAACCGATGGACAGACAACATTTTCACTTTGCGACAATGGTGTTCAAACAACTTTCCACAAGCCAAAGAACAACTAGAGAACCTGTACAAAGAGGATATTCATTTCATAGGCTTAGAACGGTAG

Protein sequence

MGRAPCCDKATVKRGPWSPQEDATLKAFIHKHGTAGNWIALPRKAGLNRCGKSCRLRWLNYLRPDIKHGGFTLEEDNLICTLYSTLGSRQVKQTPTIAAVTQQNAITNMAFPANAPPYSAAADWLRFDEQMDGNLMFADANFDFKHDPEDQFPMLWNPQELSTSSSNSSLPVEQNQVPFGGNDGETVLSYGFYQYPYGDVMEGLDFKAFSDTLNLRRINAVYAFSSSSFISIRSCSFSLTACRKISVGVILIIIDDRFMICSLREGFHIFATFQLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVSYSFEMKSSVIHYFVYPVCIATLLFAYGSQPLDTIVSRALSPSCAGNQVKSTSFLSLLPVLTSDACKNRLEELTQQSNALKKGREESGEREEALAELKAIEQHKELKDEMIQYADNDPAAFETMINGCVNSTENAIEDAHAAANRWTDNIFTLRQWCSNNFPQAKEQLENLYKEDIHFIGLER

Homology

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BLAST of CmaCh11G006700 vs. ExPASy Swiss-Prot
Match: Q8GYD2 (Meiotic nuclear division protein 1 homolog OS=Arabidopsis thaliana OX=3702 GN=MND1 PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.8e-47
Identity = 119/219 (54.34%), Postives = 139/219 (63.47%), Query Frame = 0


Query: 273 FQLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVSYSFEMKSSVIHYFVYPV 332
           F LKELEK+GP+KGVISQSVKDV+QSLVDDDLV+K+KIG S+ Y + +            
Sbjct: 27  FLLKELEKMGPKKGVISQSVKDVIQSLVDDDLVAKDKIGISI-YFWSL------------ 86

Query: 333 CIATLLFAYGSQPLDTIVSRALSPSCAGNQVKSTSFLSLLPVLTSD--ACKNRLEELTQQ 392
                                  PSCAGNQ++     S+   L SD      RL EL  Q
Sbjct: 87  -----------------------PSCAGNQLR-----SVRQKLESDLQGSNKRLAELVDQ 146

Query: 393 SNALKKGREESGEREEALAELKAIE-QHKELKDEMIQYADNDPAAFETMINGCVNSTENA 452
             ALKKGREES ER EAL +LK IE +HK+LK+EM+Q+ADNDPA  E        +  NA
Sbjct: 147 CEALKKGREESEERTEALTQLKDIEKKHKDLKNEMVQFADNDPATLE--------AKRNA 196

Query: 453 IEDAHAAANRWTDNIFTLRQWCSNNFPQAKEQLENLYKE 489
           IE AH +ANRWTDNIFTLRQWCSNNFPQAKEQLE+LY E
Sbjct: 207 IEVAHQSANRWTDNIFTLRQWCSNNFPQAKEQLEHLYTE 196

[Close]

BLAST of CmaCh11G006700 vs. ExPASy Swiss-Prot
Match: Q9M2Y9 (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.2e-38
Identity = 68/89 (76.40%), Postives = 79/89 (88.76%), Query Frame = 0


Query: 1  MGRAPCCDKATVKRGPWSPQEDATLKAFIHKHGTAGNWIALPRKAGLNRCGKSCRLRWLN 60
          MGRAPCCDKA VK+GPWSP+EDA LK++I   GT GNWIALP+K GL RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGGFTLEEDNLICTLYSTLGSR 90
          YLRP+IKHGGF+ EE+N+IC+LY T+GSR
Sbjct: 61 YLRPNIKHGGFSEEEENIICSLYLTIGSR 89

[Close]

BLAST of CmaCh11G006700 vs. ExPASy Swiss-Prot
Match: Q9SJL7 (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.0e-37
Identity = 68/89 (76.40%), Postives = 78/89 (87.64%), Query Frame = 0


Query: 1  MGRAPCCDKATVKRGPWSPQEDATLKAFIHKHGTAGNWIALPRKAGLNRCGKSCRLRWLN 60
          MGRAPCCDKA VKRGPWSP+EDA LK +I K GT GNWIALP KAGL RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGGFTLEEDNLICTLYSTLGSR 90
          YLRP+I+HG FT EEDN+I +L++++GSR
Sbjct: 61 YLRPNIRHGDFTEEEDNIIYSLFASIGSR 89

[Close]

BLAST of CmaCh11G006700 vs. ExPASy Swiss-Prot
Match: F4JSU0 (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 6.5e-37
Identity = 64/89 (71.91%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 1  MGRAPCCDKATVKRGPWSPQEDATLKAFIHKHGTAGNWIALPRKAGLNRCGKSCRLRWLN 60
          MGRAPCCDK  VK+GPWS +EDA LK++I KHGT  NWI+LP++ G+ RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGGFTLEEDNLICTLYSTLGSR 90
          YLRP++KHGGFT EED +IC+LY T+GSR
Sbjct: 61 YLRPNLKHGGFTDEEDYIICSLYITIGSR 89

[Close]

BLAST of CmaCh11G006700 vs. ExPASy Swiss-Prot
Match: Q9FKL2 (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 8.5e-37
Identity = 66/89 (74.16%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 1  MGRAPCCDKATVKRGPWSPQEDATLKAFIHKHGTAGNWIALPRKAGLNRCGKSCRLRWLN 60
          MGRAPCCDKA VK+GPWSP+ED  LK +I K+GT GNWIALP+K GL RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGGFTLEEDNLICTLYSTLGSR 90
          YLRP+IKHGGF+ EED +I +LY ++GSR
Sbjct: 61 YLRPNIKHGGFSEEEDRIILSLYISIGSR 89

[Close]

BLAST of CmaCh11G006700 vs. TAIR 10
Match: AT4G29170.1 (Mnd1 family protein )

HSP 1 Score: 191.8 bits (486), Expect = 1.3e-48
Identity = 119/219 (54.34%), Postives = 139/219 (63.47%), Query Frame = 0


Query: 273 FQLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVSYSFEMKSSVIHYFVYPV 332
           F LKELEK+GP+KGVISQSVKDV+QSLVDDDLV+K+KIG S+ Y + +            
Sbjct: 27  FLLKELEKMGPKKGVISQSVKDVIQSLVDDDLVAKDKIGISI-YFWSL------------ 86

Query: 333 CIATLLFAYGSQPLDTIVSRALSPSCAGNQVKSTSFLSLLPVLTSD--ACKNRLEELTQQ 392
                                  PSCAGNQ++     S+   L SD      RL EL  Q
Sbjct: 87  -----------------------PSCAGNQLR-----SVRQKLESDLQGSNKRLAELVDQ 146

Query: 393 SNALKKGREESGEREEALAELKAIE-QHKELKDEMIQYADNDPAAFETMINGCVNSTENA 452
             ALKKGREES ER EAL +LK IE +HK+LK+EM+Q+ADNDPA  E        +  NA
Sbjct: 147 CEALKKGREESEERTEALTQLKDIEKKHKDLKNEMVQFADNDPATLE--------AKRNA 196

Query: 453 IEDAHAAANRWTDNIFTLRQWCSNNFPQAKEQLENLYKE 489
           IE AH +ANRWTDNIFTLRQWCSNNFPQAKEQLE+LY E
Sbjct: 207 IEVAHQSANRWTDNIFTLRQWCSNNFPQAKEQLEHLYTE 196

[Close]

BLAST of CmaCh11G006700 vs. TAIR 10
Match: AT4G29170.2 (Mnd1 family protein )

HSP 1 Score: 191.8 bits (486), Expect = 1.3e-48
Identity = 119/219 (54.34%), Postives = 139/219 (63.47%), Query Frame = 0


Query: 273 FQLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVSYSFEMKSSVIHYFVYPV 332
           F LKELEK+GP+KGVISQSVKDV+QSLVDDDLV+K+KIG S+ Y + +            
Sbjct: 12  FLLKELEKMGPKKGVISQSVKDVIQSLVDDDLVAKDKIGISI-YFWSL------------ 71

Query: 333 CIATLLFAYGSQPLDTIVSRALSPSCAGNQVKSTSFLSLLPVLTSD--ACKNRLEELTQQ 392
                                  PSCAGNQ++     S+   L SD      RL EL  Q
Sbjct: 72  -----------------------PSCAGNQLR-----SVRQKLESDLQGSNKRLAELVDQ 131

Query: 393 SNALKKGREESGEREEALAELKAIE-QHKELKDEMIQYADNDPAAFETMINGCVNSTENA 452
             ALKKGREES ER EAL +LK IE +HK+LK+EM+Q+ADNDPA  E        +  NA
Sbjct: 132 CEALKKGREESEERTEALTQLKDIEKKHKDLKNEMVQFADNDPATLE--------AKRNA 181

Query: 453 IEDAHAAANRWTDNIFTLRQWCSNNFPQAKEQLENLYKE 489
           IE AH +ANRWTDNIFTLRQWCSNNFPQAKEQLE+LY E
Sbjct: 192 IEVAHQSANRWTDNIFTLRQWCSNNFPQAKEQLEHLYTE 181

[Close]

BLAST of CmaCh11G006700 vs. TAIR 10
Match: AT3G49690.1 (myb domain protein 84 )

HSP 1 Score: 162.5 bits (410), Expect = 8.5e-40
Identity = 68/89 (76.40%), Postives = 79/89 (88.76%), Query Frame = 0


Query: 1  MGRAPCCDKATVKRGPWSPQEDATLKAFIHKHGTAGNWIALPRKAGLNRCGKSCRLRWLN 60
          MGRAPCCDKA VK+GPWSP+EDA LK++I   GT GNWIALP+K GL RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGGFTLEEDNLICTLYSTLGSR 90
          YLRP+IKHGGF+ EE+N+IC+LY T+GSR
Sbjct: 61 YLRPNIKHGGFSEEEENIICSLYLTIGSR 89

[Close]

BLAST of CmaCh11G006700 vs. TAIR 10
Match: AT5G65790.1 (myb domain protein 68 )

HSP 1 Score: 162.5 bits (410), Expect = 8.5e-40
Identity = 69/89 (77.53%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 1  MGRAPCCDKATVKRGPWSPQEDATLKAFIHKHGTAGNWIALPRKAGLNRCGKSCRLRWLN 60
          MGRAPCCDKA VK+GPWSP+EDA LK +I   GT GNWIALP+K GL RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKDYIENSGTGGNWIALPQKIGLRRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGGFTLEEDNLICTLYSTLGSR 90
          YLRP+IKHGGF+ EEDN+IC LY T+GSR
Sbjct: 61 YLRPNIKHGGFSEEEDNIICNLYVTIGSR 89

[Close]

BLAST of CmaCh11G006700 vs. TAIR 10
Match: AT2G36890.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 7.2e-39
Identity = 68/89 (76.40%), Postives = 78/89 (87.64%), Query Frame = 0


Query: 1  MGRAPCCDKATVKRGPWSPQEDATLKAFIHKHGTAGNWIALPRKAGLNRCGKSCRLRWLN 60
          MGRAPCCDKA VKRGPWSP+EDA LK +I K GT GNWIALP KAGL RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61 YLRPDIKHGGFTLEEDNLICTLYSTLGSR 90
          YLRP+I+HG FT EEDN+I +L++++GSR
Sbjct: 61 YLRPNIRHGDFTEEEDNIIYSLFASIGSR 89

The following BLAST results are available for this feature:

BLAST of CmaCh11G006700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYD2	1.8e-47	54.34	Meiotic nuclear division protein 1 homolog OS=Arabidopsis thaliana OX=3702 GN=MN...	[more]
Q9M2Y9	1.2e-38	76.40	Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1	[more]
Q9SJL7	1.0e-37	76.40	Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1	[more]
F4JSU0	6.5e-37	71.91	Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1	[more]
Q9FKL2	8.5e-37	74.16	Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1	[more]

BLAST of CmaCh11G006700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29170.1	1.3e-48	54.34	Mnd1 family protein	[more]
AT4G29170.2	1.3e-48	54.34	Mnd1 family protein	[more]
AT3G49690.1	8.5e-40	76.40	myb domain protein 84	[more]
AT5G65790.1	8.5e-40	77.53	myb domain protein 68	[more]
AT2G36890.1	7.2e-39	76.40	Duplicated homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 13..64 e-value: 1.6E-11 score: 54.3
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..62 score: 10.708041
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..62 e-value: 5.89068E-9 score: 49.8814
IPR040661	Leucine zipper with capping helix domain	PFAM	PF18517	LZ3wCH	coord: 447..486 e-value: 1.3E-14 score: 53.9
IPR040453	Mnd1, HTH domain	PFAM	PF03962	Mnd1	coord: 272..316 e-value: 3.0E-17 score: 62.6
None	No IPR available	GENE3D	1.10.10.60		coord: 7..68 e-value: 9.7E-18 score: 65.8
None	No IPR available	PANTHER	PTHR48000	OS09G0431300 PROTEIN	coord: 1..89
None	No IPR available	PANTHER	PTHR48000:SF36	OS09G0431300 PROTEIN	coord: 1..89
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..62 e-value: 2.3E-13 score: 50.1
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..66 score: 19.816433
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 15..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G006700.1	CmaCh11G006700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007131	reciprocal meiotic recombination
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003690	double-stranded DNA binding