CmaCh11G006190 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G006190
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein tesmin/TSO1-like CXC 5
Location	Cma_Chr11: 2966019 .. 2979367 (-)
RNA-Seq Expression	CmaCh11G006190
Synteny	CmaCh11G006190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGGCGAAATCAGCGGTGGTGCACCACGTGTCGGGGTACAACAAAAATGCGGTGATCCGAATTGGGCTACGTTAATTTATGGTACGGTTCACGTGTCGACCTCTAACGCTGTCGTTTTTTTATCATTTTCTGGTGCCGTCATAAGATCTCGGGGATGTGTTGTAGAGAGAGGTTGACACGTGTATCCAAGATCACAGATCATAACCTTCCAATTTTGGGATTTATAGACCTATTACGGGCTAAATTAATAGAATTATATACAATTTAAATTGTTATCTTATAATAAGTTAAAAGGGGCAAATACATTTTTAGCCTTAAAAAGGTTTGAGTTTAAAATGTCCATTGGACTTATAAAGTTCCAAATAAGACGTTTTACTTCACGAGGTTTAAATAATAGATATAATTACTGTGATTGAATCAACTACCCTTTTAGTAATTGTGACACGTTTTACGGAATTTCACGTGCTGAATTCCTCATAACTAGAATTTAGGGTTTACAAATGTACTCCCCGCCTTTTTCAACGATTTATCGGCGTTCAGACTTTAGACGGACCGGTTTCGTGGCTGCTCTTTGAAGCAGGCAGAAGAATCAGGAAAACAAGGCGAGAGGATGGGTTCGAGGGATAAAGACTCTACGACTAACCACCAGCCGTTATTGAGCAGCCTGGTAGTACGGCCATCGAATAGTGACGGAGTCGGTGCAACCAGTGGCGGCCGCGTTGGTCGTGGAAGCGATTACGAGGCCGGTGAGGTTCCTCGTGACCCTCCACAATATTCTCGATTGGATCGATATTCAGCTGATTTGGGTTCGTTACTTCTGTACACCTTCGTTTTCGAACACTTCTCGAGCTACAATTGGATGAATAGGCGCATTGCTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTAAATTTGTGTGTGTTCTGTAAGTTTATCCCTGCGTTGAATTTCATCGCTTGCGACCTTAGGTTGAATTTATATGTATATTTTGGTAGGAAACATATTTTCAATGAAAGAATGAGAATTACGAATATAGGGAGGAAAGCCAGCCCGAGTCGATGGAGATTACAGAAAGTTCATCCAGGAGGTCGAAATACGACTTAAACCATAATTGTTAAAAAAATAGCAATTTTTACGTCAAGATAATGTAATCAGTTTCTGAAACTGATTCACTGTCCAAAGCCTCACCTTCGCGATTAAAGGTCCTTGAGTTCTTTTCTGGCCGAAGTTCATCAACAGACGATCCTTGATTTATAGCCATAGAATTTCCCTTGCTTTTTTGAAAGGATGGCCTCTGCATTTTGTTACCATAGATTGAATTTATTTGATTTACCAATATGATTTCTTACAAGATGATATTAAGATACATATATGGGTATATATTTTGTAAATTCATGCCACGACATGTTTACAATTTCCCATCCTTCAGGTTCTTTGTCGTAGCTAAATTCCAATTTGTGAGTTTAGCTTAAATTAGAGAGAGTATTAAACTAGTTAGCCAAAGTATGCTGTCGTTTCATGATTGATGAAATGCTTAGACATGCTTCTAAAACAAATGAAGAAAACCATCCTCACTCACTCTCTTTCCCAAGGACATATTATTGAAGATATCTTAATAATAGAACTCCGCAGGTTCCTTTTACTTTATACGCGTATTGGTCTTTTGTCCTGTATGGTCACATGCTCATGTTTTAGTTGGACTCCATTGAGGAATTTTGCCAAGATCATTGCAGTATGACTCTCGTCTTTATTATACTCCCTGGTCCTTGCTGCCTTATATCACTTGAAAGTTTCTGCAGGAAACTTGTGGGGCACCCTTGATCTGTATTCATTGATAGACGAATATCTATCTACCATTCACAAGAGAGGATGAGTTTTTAGAGTCTTTCCGTCTAGAGGAATTTTGTCTAAGAGTTTTTCTCAAAATGGTCAATTATTGGAATTAATGGGTTTCACTCTTGATTCCAACCAATTTCTGATCACATTTGGTGAGTCAATTATCATGTATTATGCCTACCTTGCTGTGAAAGACACTATCAAATGTCAATTCATTGGGATGCCAAATATGTCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAGGATGCTAGATAGTAGATATGTCACTTATTTTTTTACTTCAATTTTTTTTTCAATCTTGTTGGCTCTTTTGATATTTGAATGAGATTCAAGTATTTTTCTTAAATTCTAGCAATTTGCTTTGTAATCTTATACTACCTACTTTGTGTAAACTTAGTTCAATTTATTTAAAAGTATCAATTTGTGCATGTAATTTGACATTTTCTTTTTGATCTATCAAGTTCTAAGTCAGGATGCATTGATAGCTTAGGGTAAGCACTGCCATTCTTGGTTGTCATTTTGATCTTATAGAAAATGTTGTGATATTCTGGAGGAAATGGAGTTCATAACCTCTTTATTTCTTTTCTTTTATCCCCATTTTCTTTTGTATGTCGAGAATGTGGATCTACTTCCCCTTGTCAAAATTTTGTTCTGGGAATAAAACTTTCTATTCTCTTACAGCTTTGTGTTGCCGACTGCAAGAACTTAGATCTTGAGAAGGGCATTGAGTAAGTGCAGTCTCAGATCATGATCTCAGGAATTGCTCTTTTTTCCATGTTAAGACCATTTAATTTTGGGGGTAAAATTTGTGCAAGAAATTCTGGGTTGCTGAGTGGGGGGGCTATCATATCATCCGTCTGTCATTTTGGGATAGCATGGTGTTGGGCCTGGTTGGAGTAAGATGTGTTAAAATACCAATCATAATTGACTCATGGTGAGCGAGGGTTCTCTTAAGAAATTGAAGGTGATCAAATAACAAGCTAGAGACGTATTGGTCTGCCTGGTTGAGACTATTGGTATGAGCTCTAAATGAACTTACAGGTGCATTGACCAACGGTTAAGGGCTACCAGCTTTACTCTGGTATTTGACTCGTATGAAGTGGAGATGCCAATTTATGTCATGTGGTGGATTTTTTCACTGTCTAGATTTCCATCTGAGGGATGCAATTATTCTCGTGGAGAGACATTGATTGAGCTGTATTGGTGTATTAAGGGCCATCTGAATCATGTGTAGCAACTTCTTGATCTATTTGTCGGGTTCATAAAGGGTTGATTTGCAGGTGAAGTTTGGGATCTTCACATTTCATTTCGTACGACACCCTGCAAATTAGGGATTTGTTTCAACTAAATATATGGTAGTGTGAATGGGCATATCAATGGCACCCGGTGGATTAATAGTTGGATTAACTGGATTCCTTTCATCGTATGAACTCTTACATATTTTTTTTGTGGTCAATGACTGAAGATATCATTGGTCATTTCAAGAGGATATAGTTAAGCCCACTAGATTCTGCAGAAAATTATTCTAGCGGCATGCATGGAAATCCATTGGTATATTTCTGAAAGCCGTAGAGGAACGAACTATTGTGACCATGCAAGTAAGATTTGGAGTTTGATTTCTGAATTAACCAATGAGTAGGATGGGTGCCATTGTTTAATCTGGTTTTTGGATGCTTCAATTTGTGTGGATTTTTTAATGACGGTTTTTTTCCTGTGAGCTTTTCACTGTGGTCTTACTGAGCCTCCCAGGTGCAATTCAACTGAAGAATTCTGTATTTAAGCATGGGTTGATTATGCTGTGTGATTATTTTTGTACGTGTTGTTCATTTAAGATTGGGCTATGGGTGGATGTCCTTCCTCATTGCCAGGACATCACCACACTGATTTTTTTTTTTTTCTTCAAGACTTGTGCTTTTGGTCTCATTGCTGGGTTTGTGAAATTGGAAATAGATTACCTGTAGGCTATGATAACTCAAAATGTGGGTTTTACATGTACTAACACTGGACATGTGGAAAGAAGGACATGTGTACGTTGCAAGTTGCTATGGTTTTGCTATCTTATTTGCTTCTATTAAAGTTTCTGATGATATGGGTGGTAACGTTTTGAACCTATACGGGCAGTTATCATCAGAACTTTCTCTCTTGTCTGCATCTTTGCACCTTCTATTGCTCTGTCCACAGAGAGGAGATGCCAACAATGAATGGCAATGGTTGTCAATTTGTTTGGATGGTCCTTTTGCAGTTGTATCAGGGAAAATCTTTGGAGATATATGGATGTTGTACATCAAATAAGCTTCCTATACAATATGTTACTTTTCTTAATATCTTATAAATCCACTACCATCTTTATTTCAGGATATAGAATACATGCAGGTTCAGCTTCTCCAACACGTCATCGGGATGATCAACGGTATGTTTCTGATTTTGATCGTTCTGGTGATCTCATGCGGGGCCGTGAATTTGGAGGCAGGAGCGATCATGGTAGATATCGGGAGACTTCACCCCATTACAGTCGAAGAATAAGTGGTGGCAGGCCATATGGGAGAGGTTTTGATAGTCCTGGACTTGCTCCTGGGCCATTTAGAGGTGAACGTAGTAATAATCCAAATGTGCGTCCTAGGGATGGGGATTGGTATTGCTCAGATCCTTTGTAAGTACTCACCTAACACCACAATTTGATATATATATATATATATGACAATGGATTTGCTTCTTTTATATACAGACGAACATTTGTTGATACCATGACATTACACCTTTTTCTCATATGAACGAGAAATTCATACATTGCACGGAATAGGATCCTTTTCTATTGATATGTCTTTTGGTTGGTTGAATTATTATTACTTTTTGTTTGGAGGAGTTGATGATTGTGTTTATTGTTTTTGAAAAATAGTTTTGAGGCTGCTTTTCTTGAAAGCATTTTTTTTCATATATATTGCTTTTATGGGTTTCAAAAAAGAAAAAACATATTACTTTATTTTATGTTGATCAGACTGAATGAAAAATGTCACGTCAGAAAAGCTCGTGTGTCCACCAAATCTTGTAAGTGAATGATAGTTTTTTCAATTTCTTGCCCATTTGGCATGTGGTCTGTACGAGGAATATTTTTATAATGCATAGCATGGTGTACTTTCTATCATTACATTGCTTCGTGGTGCATTTCTTTTTTCAAACCAGTTGTATTTTTATTCTTCATTAGATGTGACAACCTAAACTTTGGAAGACGAGAATTTTGTAACAAATGCAACAGACCCCGCACTGGAGCTGGTGGAAGACCTCGAAGAGGCCATGTTGGTGGTCCACCATCCCTGCATTCTCCTCCTAGACGCTTTACTGCCCACCCAATTGAACGTTCTCCTGGCAGGACTCCTAATGAATATAGGTCTCCTCCCCGTGCTTGGACCAGGGGTTGTTCCAGGGACATTGCAGCTGGTGGTCTGGCACCTCAGAGGTATGAAAACAGGTACTCCGACCTGCGGAGGGATCGGGTGGATTATCTAGAAGACAGCTTCAGAGGAAGGTCCAAGTTCGACAGGCCAATTCTTTCCGATTGGCCCCTTAGAGACCATGAAAGAGATGAGTTCATCCCCGAGAGGAAGGGATTTGAAAGAAGGCCACCATCCCCACCACTGCCGTTGCTTCCTCAGCGTGGCCGCTGGGCACGTGATGTGAGAGAGAGGAGCCGCTCCCCAATTAGAGATCCAATTAGATCTCCATTGAGAGTCTCGCTTCGGTCTCCACGCGGCCTTCCACCAAAAGACTTCCGTAGAGATGTGTTTGTCGAAAGGGAGCACATTTATAGGCGCGGCCTTGGACAAGAGCGCGATGGAGGTCCATTTTAGCGTTGAGAATTGAGCAGCACCCCGTAATCTGTGTTTAGAGCCTTGGAAAGAGGATGTTAAGAAGAGCCTGCTTAATTTTTTCCCGACAGGCCCTGTGTGTTGGAACCTGCTAATGGGGTCCTCTATCTTCTGCCTCCTATATTTCGTATTTCTTCTTATTATTATTGTATGGTGTAGTTAGTTGTTGACAGCCTTCAAAAATATTGAAGTAAATGGCTTGCATATATACTGTGTATCTTTGGTTTATTGGTTTCTGGGCAATGGTTTTGAAGCGTTATTATCTTCACATAAATCATTTTGGTCAGGGTGTAGTTTGGATTTTGCCACTTGGAGGGAGCCACCTCTATTTTGGTTCTTTTTCAATGATCGTGCAGTGTTTGTTAGACAACAGATAACACATTCTTACATGAACCTTGACGTTTATTAACTAATACGTTTCTACACGAGCCTCGACTTTATTTTTACTGAGAAATATTTTATCAAGGTCAATTACTTACATACCTTAATAATAAGGTTGTGAAATATTTATTTATTAATTTCCGGATTTCCACGAAATTCAAAATGAACCGGTTTAATTTATGTAATGGTGTAGGATTTGAAGTTGCCCTGGTGATGAGATTTAATCCTGACCGTCCATTCATTTGTTGTACATGTAGTCGAAAGTAGAGGATCTCCCATTAATATAGATTGTAGTAACAGAATCTTATTTGATTTCCCTCACTTTTTCACAAGATCCTTCAATCAAGCCTCTACACGTGTTCCGAATGTATTTTAACTGCATACGTGTCGTTCAACTAGTGGCAGATCCATAGGCACATGTTACTCTCGCTTGCATGGGAAAACATCTTGACTTTCGTTATCTGACGGTCAATGGCTGGAGCATTCTTCACTCTATGAATTTGCACCGTTAGATTAGCTGGTTAAACATTCGCCGTCTGATGGATCTCACTGGAGCAATCTCACCGTTCAATATTTGGAAAAGGTCGAAATTCAAAATCTCGCAAGGGAGAGAGACGAAGAACGTAAGCCTTCTTGCTCATCTTCTTCTTCTGTCCATTCGTGTACTGTATACAAAATCATTATTGTGTAGCCCTAGACGGCTCTTTCGAGTTCCCTTCTCTTCGGCTGTCTTCTAGTTATCGGAAGTCCTTGTGATTTTTCAGGTATTAGAGGCCAGCTTCAAAGTCGAAGTTTTTTCAGTCTCGAAATTGCATGTTTTTGTACACGATCTGTACCGCCGGTATTGGACTGGGATTCTTGCTTGAAATTCATAAGATTGAGTTGATTTCTAGATTTTGATTTGATGGTACCGAATTTGTGGATTGAGAAAGTTTTTTGAAAAGATTTGAAAATTTGTTGGTAGTGGTTTGGTTTGGCAGTTGGAATTTAAATGTAATGGTGGGAATTAGAGCATCCGGAGATGGACGATTTACCCCCGCCAAGTGCTCAAACTGGTAGTGAGGAACCGGATAGCGTGGTTGCATTTGATGTTACTGCTAAGAAACTAGCTAGACAGCTGGATTTTGCGGAGTTTGGTGGTGCAGTCTTACCAGAGCTCCCTCATTTTCAGTCTCAGTCTCGTTGTCACTCGGAGTCACCAGCCGTGATGGTGGTGCAGAGTCCGTCGCAGCCAAAGTCCCCTCAACATTTGATGGTTTTGCCCGTCGGAACACAATCGCCTCATCCTGTGGCTGCGAGGTCCACTTGAGATCTCTTGCTTGCTTTGGCGTATTCTTTGAGCTTTATCAAATATTTCTCTTTTTCTTTCTGATGGGGAAGGGAGGGTGGGATTTCGAAAATTTGTTTCCATTTTTATAAGTGATCTATACTAATAAATAAATTAGCTTCTGAGTGTGATATTTGATCAATTATGTCGTCCCAATTTCACTTTTTTAACTTCTAACTTGTTAGACTTAAATTCTGGATTCCTGAAATGTCGTTTACTCCAAAGTCCCCGCTCCCTCCCCTTCCCTCCGGAGTTAAAGTTGATTCATTTTATTTATTGGGTTATAATTTGTGCTTTTTGTCAGTGGTTCTTTTGTTGTTGCTTAGTTACATCGGCGGTTGTCACAATATATTTGGCCTCTTCGCTTCGTAGTTTTTGTCCCATTATGATAGTGTAGACAATGACAAAGTACTTCAACAAACAAAATCTTTTCTCTCCTCGCTGAAAGCCTGAAATTGGTTTTGAACTGATCAGATTAGTGAAACATTCTTTTGGGGAAGAGGTTAGTTTGGTGTTGCTTTCAGTGCAGGTGGAAAATTTCCTGTGCTCTTTCTTCTTCATCGCTTTGGTGTATCATTGATTTTTCACAATGTGTATAATTCTTTCTAGGAGTTTCTATGTATATATCTCTCATTAAGGAAATACTTTCACTCTCTGTATTTGTCCTCATTATTTTTTTATATCTTTCTGCCCACCCCCCTTTCTGATTAGGATGGAATTTGACTCTGTTTCTGCTTAAATATATTCTAGCACTTGTATTTAATGTGGATCAAGACTTGTAATTTCTCTTGTTAATGTAACTTCAATTTAAGTGTGTTCTTGAATTTTATCACTAGTAAATTTGAATTCAGTGCCTGCTCATGTTTTTAACTCATGTGTGCGTCTAAGTATGAATGAGAACTTGGGATAACTCTGTTAATTAATATGTGACTCAGTTTTTATTTATTCTTTTGACCAGAAAGCCAGATTTTCCAAAGTCACGATCAAGGTCTGTAGAAACAAAAGATGCTACTCCAAAGAAACAAAAACAGTGCAACTGTAAACACTCACGCTGCTTAAAGCTGTATGAACATGATCTATATGCTTTCACAAAGTTGCTTACCCCATGAGTTGACCTTTTTTTCTTAATGCTTTCTAGTTCTGTGTTGTCATATATCCAATGCCTTATTATGGTTGTTCTGATCAGTAGTTAGATATGCCTAACAGGCTTTGTAATCCTGTAATATTTATCAGTAGTTTCTGGATTTTGATTTCTCTTTGGAACTCTCATAATGGAGAATATAAGTGAAGTAACCTGATTTTGTGAATCTTTTGTATCTTTCTCCACAATTAATTTCTTGTATGAATATGCAACTGGTAGCCTTCAAATGTTCACCATACCTGAAACTAAATTAATGAACAGGTACTGTGAGTGCTTTGCCTCTGGAATATACTGTGATGGTTGCAATTGTGCAAATTGCTATAACAATGTCGAGAATGAAGTTTCTAGGAGAGAAGCAGTTGAAACTACTTTAGAACGTAATCCAAATGCATTCCGACCAAAGATAGCTAGCAGCCCGCATGGACCACGAGAAAGCAGGGTACGCATGTTGGTCTAAGTCTGAGTGTAATGGGCGCTTTTCATCATGGTTGTTTTGTATGTAAATAAATTTATTAACTGACTGAGGAATATTATGTATTTAGTTAATTTTATGCACTTTGCGATTCCTTTGAGAAACTTTTTTCCCCTTTTGTGTAATTAATTAGAAAATAACATTATACCATCTGAATGACGTCACATTAATATCTAGCATATGTTATTCTATTGTCCTGATGTAATTGAGGAATTAAGCAAATTTCTGGTTCTGGAGATGATCGGTTACCTAGTCTAGTAGAACTTAGAGCTATCGTCAGAGGTTCCAAGTTATTCGTGGGTGATAAGTTGATGTTGTGATTTCCACTTTTGCAACATTTCGAGGATAGTTTCAGTGGAAACATATTACATTTATATATTGCAAGGGCTTAGTTTTTGTCCGTGTTCTTTTTCCTCATTAAAACTAAAAATCTTTATTCTTATCATTTTTCACTTGGAATATGTGAATATAAAATTCAATGTTTTATCGTCACTGCTATATGATGTAGAGATTGACCATGTTTTATTTACAACGAAATTAACTATTTTGAGCACCTGTAGGATGAGATTGGAGAGGTTGTAATGCTGGGAAAGCACAACAAAGGATGCCATTGCAAGAAATCAAGTTGCTTAAAGAAGTATTGTGAGTGTTTTCAGGCCAATATTCTCTGCTCTGAAAACTGCAAGTGCATGGACTGTAAGAACTTTGAAGGAAGTGACGAGAGACAAGCACTTCTCCATGGTGACCATGTCAACAACATGGCTTATATTCAGCAGGCAGCAAATGCTGCAATAACTGGAGCTATTGGATCCTCTGGTTATGCTTGCCTTTCCACTTCAAAGAAAAGAAAAGGCTCAGAGCTTTGCTTTGGCCCTACAGGGAAGGATGCCCCCTTCAACGGCATAGCACAATTTCATCAGGTAGTAACTTCAAAAAGTACAAAAAATACAAATTTGATTTCTGAGAATAAAGTTCTTTCCCAAGTGCCAACATTTTAATGTGGAAAACTGTTAGTTTGTTCATTGTGTTACTATAAGATTCAAAATAAAGTCTTTGTGCTCTCATCATAATAATAAACTTTTTAGTGGTGCTAGGCTTCTCTGTTCTTAATTTAGATAGAAATCTTTTTTTGTTAGTAACAAAGTTGTGCATTTGAATGCTACATTTTAGTGAGTCAGGGCTCATGATCTAGACACTAACTTCATTTTGTGTGTTTATCAGGCTAATAATATGTTGTCTTCTGGCGCATCTACATCATCTCCCCTCCCTGTTGCTCATGTTGGCAGCCCTGCAGCACCGGAACCTTCAAAGTTTTCATTCAGGTATCAGTTGAGTGGCTTCTGAAATTTTTAGTAATGCAGTCTAACCTGCTTACTTATTGAACTAGACATGTACCATTCTTGAAGGTCCTTATTGGCAGACCTCATCCAGATGAACGACTTGAAGGAGCTTTGCTCAGTTTTAGTGGTGTTATCAAGCGAAGCTTCCAAGAATTTAGCAGGTAATGTGTTAAAACTTTCATCGTATTGCCAAGGATCTAAGATTTTGTCCAGGAAGTTACAGAGCTGTGTGCAAAATGATTGGATCAGCTGCGTTGTGAATATTTTACGCAATGAATATATGCCTACATACATCAATAAGCACTTTCTCTCTTGTCGTTCTGATCTGAGTTTCTATGGCCAATGAAGTGTTGGGGTTTAAGGTCATTCAATTATTGGTCTATCCAAATAGTGTTTGTGGTTTGTCTCAATACAAGAAGTGCATTAAATGTCCTTCGTCAAGTTCTTTCCTTCTATATATGGGTCAAGTGGGTCTTTAGGACAGAGGGCCATGAGGTATGGTAACTCTTAAATGGAGGCGCATTTCTTTAGCAAATATCTGCTTTAAGAATATAAATGCAGAAAAGAATCTATCAGACCTCGTAAATTAGCTTTTGGAGGTTAAGAAATAAAACACCGGTAAGGACGGACCTCCCAACAGCATGAACAAATAGTGTAGTCTGTTTCTCATGTCCTGGAAACATCTCAAGTTGATTAATCTTTATCCTCTTAGGTTAAGTTAAGTTAGATGCTAACTTTTTCTCTTTGAGAATCGGACAATGCTTGAATAGGAGAAAAAAGTGGCAACAAAGGAAAAGCTCGATGCTGCTTATGATTTTGACCGTTATCTTGCTACGTATCTGGTCTAAGTTTTGGCAACTAGGATACTCCTGGAACCTTAATAAACTAGCATTAATTGAACTCCATAAACGACACAAAACTAAGAATACGTATTGAGACTTAAAAAACATCTTACATCTCTTCGCTGATAATCATCCCCTTCCGAACTTCCCGCAGCAAATGTGCCAAGTTTTCTGTATGTAAGAGACTTTTCAAATTATGTTGTATTTCTCTTTCTCAAGGTATCAAATCTCACTTGGTTTTCTGAATCCATAATTTCCGTCAAAGCGGAATAAGTTTTAAGATCTAACCAATTGTAACATATTTCAGCGCTTGGTTTGTTTATCATAAACTTAGAACTTAAAAGGTGTTGACCACCCAAATGAGAATTCTTTATATATCTGTTCAGAACAAAGAATTGCTGTGAAGCAGATAAATGATTCACTACAGATTTCACGTGCTTCAACTGGAGATAGGTCACAGCTTCAGAAGACAGATGCGAAAGCCGCAGATGTTGAGTGTGAAAGTTTAAACCAAGGTGATAGAATTGTACATCATAATTCCAATTCAGATAGTTCGGACACGACAACGGCAAGGCCGATGTCCCCTGGAACTTTAGCTTTAATGTGTGATGAACAGGATACCATGTTCACGGGAGCTGCTCTAGCTCATGGGTTGGCAGGCCATGGTTGCAACACATCATCACATATGCTTGATAAGTCTGTATCAGAAGTCTACATAGAGCAGGAACGGATTGTTTTGACAAAGTTTCGAGATTGTCTTAATAAACTCATCACTCCTGGAGAGATAAAAGGTAAGCTTGGGTCATTTTGCTTGATAAGCTATTAATATAACCGTGTAGAAGGCAAGACTCAAAGGAATTATTGAAATTGAACTATATCTGCGGTAACATTCAACATTTAGGGCTGATACTGATCTCTTGAAGAATTATTCTAGCATATTACTGAATCTGCCAGAAAAATCTAAAAGTTTATCCTTAAGTCTTTTGTTTGTAGTTGTTCTTCATTTTCTCTTGAATTTAACTAGTAAGATGTAGTGAGCATGGGAGTTGAATTTGACATATCCCAATATAATCCAACTCATACTATAGCTAGTTTCTTTTGAGTTTTTGTTAATTTCTTATGTGATGTTTCGATAGATCAAATAGTAATGTTTATATTATTTGTTTCCAATAAATGAACTAACTATGCTCTTGAATATGGACATTGTAGAAACAAATTCAGTAGAAGCGAGGAATGAAAATCACAGCAAGAATTTCACCTCAAACAGTGGATACCGACAGAGAATTATTAGCAATGGGGTCATAAAAAATGTCGCTCTCTCGGCACCCAGAATACCACTGATCGATGCTGCAGCTCATCATACTAGTAATAAAATTCTAACCCTACCTGAAAATGGGAAAGAGTAA

mRNA sequence

ATGGGAGGCGAAATCAGCGGTGGTGCACCACGTGTCGGGGTACAACAAAAATGCGGTGATCCGAATTGGGCTACGTTAATTTATGGTACGACGGACCGGTTTCGTGGCTGCTCTTTGAAGCAGGCAGAAGAATCAGGAAAACAAGGCGAGAGGATGGGTTCGAGGGATAAAGACTCTACGACTAACCACCAGCCGTTATTGAGCAGCCTGGTAGTACGGCCATCGAATAGTGACGGAGTCGGTGCAACCAGTGGCGGCCGCGTTGGTCGTGGAAGCGATTACGAGGCCGGTGAGGTTCCTCGTGACCCTCCACAATATTCTCGATTGGATCGATATTCAGCTGATTTGGGATATAGAATACATGCAGGTTCAGCTTCTCCAACACGTCATCGGGATGATCAACGGTATGTTTCTGATTTTGATCGTTCTGGTGATCTCATGCGGGGCCGTGAATTTGGAGGCAGGAGCGATCATGGTAGATATCGGGAGACTTCACCCCATTACAGTCGAAGAATAAGTGGTGGCAGGCCATATGGGAGAGGTTTTGATAGTCCTGGACTTGCTCCTGGGCCATTTAGAGGTGAACGTAGTAATAATCCAAATGTGCGTCCTAGGGATGGGGATTGGTATTGCTCAGATCCTTTATGTGACAACCTAAACTTTGGAAGACGAGAATTTTGTAACAAATGCAACAGACCCCGCACTGGAGCTGGTGGAAGACCTCGAAGAGGCCATGTTGGTGGTCCACCATCCCTGCATTCTCCTCCTAGACGCTTTACTGCCCACCCAATTGAACGTTCTCCTGGCAGGACTCCTAATGAATATAGGTCTCCTCCCCGTGCTTGGACCAGGGGTTGTTCCAGGGACATTGCAGCTGGTGGTCTGGCACCTCAGAGGTATGAAAACAGGTACTCCGACCTGCGGAGGGATCGGGTGGATTATCTAGAAGACAGCTTCAGAGGAAGGTCCAAGTTCGACAGGCCAATTCTTTCCGATTGGCCCCTTAGAGACCATGAAAGAGATGAGTTCATCCCCGAGAGGAAGGGATTTGAAAGAAGGCCACCATCCCCACCACTGCCGTTGCTTCCTCAGCGTGGCCGCTGGGCACGTGATGTGAGAGAGAGGAGCCGCTCCCCAATTAGAGATCCAATTAGATCTCCATTGAGAGTCTCGCTTCGGTCTCCACGCGGCCTTCCACCAAAAGACTTCCGTAGAGATGTGTTTGTCGAAAGGGAGCACATTTATAGGCGCGGCCTTGGACAAGAGCGCGATGGAGAGCATCCGGAGATGGACGATTTACCCCCGCCAAGTGCTCAAACTGGTAGTGAGGAACCGGATAGCGTGGTTGCATTTGATGTTACTGCTAAGAAACTAGCTAGACAGCTGGATTTTGCGGAGTTTGGTGGTGCAGTCTTACCAGAGCTCCCTCATTTTCAGTCTCAGTCTCGTTGTCACTCGGAGTCACCAGCCGTGATGGTGGTGCAGAGTCCGTCGCAGCCAAAGTCCCCTCAACATTTGATGGTTTTGCCCGTCGGAACACAATCGCCTCATCCTGTGGCTGCGAGAAAGCCAGATTTTCCAAAGTCACGATCAAGGTCTGTAGAAACAAAAGATGCTACTCCAAAGAAACAAAAACAGTGCAACTGTAAACACTCACGCTGCTTAAAGCTGTACTGTGAGTGCTTTGCCTCTGGAATATACTGTGATGGTTGCAATTGTGCAAATTGCTATAACAATGTCGAGAATGAAGTTTCTAGGAGAGAAGCAGTTGAAACTACTTTAGAACGTAATCCAAATGCATTCCGACCAAAGATAGCTAGCAGCCCGCATGGACCACGAGAAAGCAGGGATGAGATTGGAGAGGTTGTAATGCTGGGAAAGCACAACAAAGGATGCCATTGCAAGAAATCAAGTTGCTTAAAGAAGTATTGTGAGTGTTTTCAGGCCAATATTCTCTGCTCTGAAAACTGCAAGTGCATGGACTGTAAGAACTTTGAAGGAAGTGACGAGAGACAAGCACTTCTCCATGGTGACCATGTCAACAACATGGCTTATATTCAGCAGGCAGCAAATGCTGCAATAACTGGAGCTATTGGATCCTCTGGTTATGCTTGCCTTTCCACTTCAAAGAAAAGAAAAGGCTCAGAGCTTTGCTTTGGCCCTACAGGGAAGGATGCCCCCTTCAACGGCATAGCACAATTTCATCAGGCTAATAATATGTTGTCTTCTGGCGCATCTACATCATCTCCCCTCCCTGTTGCTCATGTTGGCAGCCCTGCAGCACCGGAACCTTCAAAGTTTTCATTCAGGTCCTTATTGGCAGACCTCATCCAGATGAACGACTTGAAGGAGCTTTGCTCAGTTTTAGTGGTGTTATCAAGCGAAGCTTCCAAGAATTTAGCAGAACAAAGAATTGCTGTGAAGCAGATAAATGATTCACTACAGATTTCACGTGCTTCAACTGGAGATAGGTCACAGCTTCAGAAGACAGATGCGAAAGCCGCAGATGTTGAGTGTGAAAGTTTAAACCAAGGTGATAGAATTGTACATCATAATTCCAATTCAGATAGTTCGGACACGACAACGGCAAGGCCGATGTCCCCTGGAACTTTAGCTTTAATGTGTGATGAACAGGATACCATGTTCACGGGAGCTGCTCTAGCTCATGGGTTGGCAGGCCATGGTTGCAACACATCATCACATATGCTTGATAAGTCTGTATCAGAAGTCTACATAGAGCAGGAACGGATTGTTTTGACAAAGTTTCGAGATTGTCTTAATAAACTCATCACTCCTGGAGAGATAAAAGAAACAAATTCAGTAGAAGCGAGGAATGAAAATCACAGCAAGAATTTCACCTCAAACAGTGGATACCGACAGAGAATTATTAGCAATGGGGTCATAAAAAATGTCGCTCTCTCGGCACCCAGAATACCACTGATCGATGCTGCAGCTCATCATACTAGTAATAAAATTCTAACCCTACCTGAAAATGGGAAAGAGTAA

Coding sequence (CDS)

ATGGGAGGCGAAATCAGCGGTGGTGCACCACGTGTCGGGGTACAACAAAAATGCGGTGATCCGAATTGGGCTACGTTAATTTATGGTACGACGGACCGGTTTCGTGGCTGCTCTTTGAAGCAGGCAGAAGAATCAGGAAAACAAGGCGAGAGGATGGGTTCGAGGGATAAAGACTCTACGACTAACCACCAGCCGTTATTGAGCAGCCTGGTAGTACGGCCATCGAATAGTGACGGAGTCGGTGCAACCAGTGGCGGCCGCGTTGGTCGTGGAAGCGATTACGAGGCCGGTGAGGTTCCTCGTGACCCTCCACAATATTCTCGATTGGATCGATATTCAGCTGATTTGGGATATAGAATACATGCAGGTTCAGCTTCTCCAACACGTCATCGGGATGATCAACGGTATGTTTCTGATTTTGATCGTTCTGGTGATCTCATGCGGGGCCGTGAATTTGGAGGCAGGAGCGATCATGGTAGATATCGGGAGACTTCACCCCATTACAGTCGAAGAATAAGTGGTGGCAGGCCATATGGGAGAGGTTTTGATAGTCCTGGACTTGCTCCTGGGCCATTTAGAGGTGAACGTAGTAATAATCCAAATGTGCGTCCTAGGGATGGGGATTGGTATTGCTCAGATCCTTTATGTGACAACCTAAACTTTGGAAGACGAGAATTTTGTAACAAATGCAACAGACCCCGCACTGGAGCTGGTGGAAGACCTCGAAGAGGCCATGTTGGTGGTCCACCATCCCTGCATTCTCCTCCTAGACGCTTTACTGCCCACCCAATTGAACGTTCTCCTGGCAGGACTCCTAATGAATATAGGTCTCCTCCCCGTGCTTGGACCAGGGGTTGTTCCAGGGACATTGCAGCTGGTGGTCTGGCACCTCAGAGGTATGAAAACAGGTACTCCGACCTGCGGAGGGATCGGGTGGATTATCTAGAAGACAGCTTCAGAGGAAGGTCCAAGTTCGACAGGCCAATTCTTTCCGATTGGCCCCTTAGAGACCATGAAAGAGATGAGTTCATCCCCGAGAGGAAGGGATTTGAAAGAAGGCCACCATCCCCACCACTGCCGTTGCTTCCTCAGCGTGGCCGCTGGGCACGTGATGTGAGAGAGAGGAGCCGCTCCCCAATTAGAGATCCAATTAGATCTCCATTGAGAGTCTCGCTTCGGTCTCCACGCGGCCTTCCACCAAAAGACTTCCGTAGAGATGTGTTTGTCGAAAGGGAGCACATTTATAGGCGCGGCCTTGGACAAGAGCGCGATGGAGAGCATCCGGAGATGGACGATTTACCCCCGCCAAGTGCTCAAACTGGTAGTGAGGAACCGGATAGCGTGGTTGCATTTGATGTTACTGCTAAGAAACTAGCTAGACAGCTGGATTTTGCGGAGTTTGGTGGTGCAGTCTTACCAGAGCTCCCTCATTTTCAGTCTCAGTCTCGTTGTCACTCGGAGTCACCAGCCGTGATGGTGGTGCAGAGTCCGTCGCAGCCAAAGTCCCCTCAACATTTGATGGTTTTGCCCGTCGGAACACAATCGCCTCATCCTGTGGCTGCGAGAAAGCCAGATTTTCCAAAGTCACGATCAAGGTCTGTAGAAACAAAAGATGCTACTCCAAAGAAACAAAAACAGTGCAACTGTAAACACTCACGCTGCTTAAAGCTGTACTGTGAGTGCTTTGCCTCTGGAATATACTGTGATGGTTGCAATTGTGCAAATTGCTATAACAATGTCGAGAATGAAGTTTCTAGGAGAGAAGCAGTTGAAACTACTTTAGAACGTAATCCAAATGCATTCCGACCAAAGATAGCTAGCAGCCCGCATGGACCACGAGAAAGCAGGGATGAGATTGGAGAGGTTGTAATGCTGGGAAAGCACAACAAAGGATGCCATTGCAAGAAATCAAGTTGCTTAAAGAAGTATTGTGAGTGTTTTCAGGCCAATATTCTCTGCTCTGAAAACTGCAAGTGCATGGACTGTAAGAACTTTGAAGGAAGTGACGAGAGACAAGCACTTCTCCATGGTGACCATGTCAACAACATGGCTTATATTCAGCAGGCAGCAAATGCTGCAATAACTGGAGCTATTGGATCCTCTGGTTATGCTTGCCTTTCCACTTCAAAGAAAAGAAAAGGCTCAGAGCTTTGCTTTGGCCCTACAGGGAAGGATGCCCCCTTCAACGGCATAGCACAATTTCATCAGGCTAATAATATGTTGTCTTCTGGCGCATCTACATCATCTCCCCTCCCTGTTGCTCATGTTGGCAGCCCTGCAGCACCGGAACCTTCAAAGTTTTCATTCAGGTCCTTATTGGCAGACCTCATCCAGATGAACGACTTGAAGGAGCTTTGCTCAGTTTTAGTGGTGTTATCAAGCGAAGCTTCCAAGAATTTAGCAGAACAAAGAATTGCTGTGAAGCAGATAAATGATTCACTACAGATTTCACGTGCTTCAACTGGAGATAGGTCACAGCTTCAGAAGACAGATGCGAAAGCCGCAGATGTTGAGTGTGAAAGTTTAAACCAAGGTGATAGAATTGTACATCATAATTCCAATTCAGATAGTTCGGACACGACAACGGCAAGGCCGATGTCCCCTGGAACTTTAGCTTTAATGTGTGATGAACAGGATACCATGTTCACGGGAGCTGCTCTAGCTCATGGGTTGGCAGGCCATGGTTGCAACACATCATCACATATGCTTGATAAGTCTGTATCAGAAGTCTACATAGAGCAGGAACGGATTGTTTTGACAAAGTTTCGAGATTGTCTTAATAAACTCATCACTCCTGGAGAGATAAAAGAAACAAATTCAGTAGAAGCGAGGAATGAAAATCACAGCAAGAATTTCACCTCAAACAGTGGATACCGACAGAGAATTATTAGCAATGGGGTCATAAAAAATGTCGCTCTCTCGGCACCCAGAATACCACTGATCGATGCTGCAGCTCATCATACTAGTAATAAAATTCTAACCCTACCTGAAAATGGGAAAGAGTAA

Protein sequence

MGGEISGGAPRVGVQQKCGDPNWATLIYGTTDRFRGCSLKQAEESGKQGERMGSRDKDSTTNHQPLLSSLVVRPSNSDGVGATSGGRVGRGSDYEAGEVPRDPPQYSRLDRYSADLGYRIHAGSASPTRHRDDQRYVSDFDRSGDLMRGREFGGRSDHGRYRETSPHYSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFCNKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFTAHPIERSPGRTPNEYRSPPRAWTRGCSRDIAAGGLAPQRYENRYSDLRRDRVDYLEDSFRGRSKFDRPILSDWPLRDHERDEFIPERKGFERRPPSPPLPLLPQRGRWARDVRERSRSPIRDPIRSPLRVSLRSPRGLPPKDFRRDVFVEREHIYRRGLGQERDGEHPEMDDLPPPSAQTGSEEPDSVVAFDVTAKKLARQLDFAEFGGAVLPELPHFQSQSRCHSESPAVMVVQSPSQPKSPQHLMVLPVGTQSPHPVAARKPDFPKSRSRSVETKDATPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCANCYNNVENEVSRREAVETTLERNPNAFRPKIASSPHGPRESRDEIGEVVMLGKHNKGCHCKKSSCLKKYCECFQANILCSENCKCMDCKNFEGSDERQALLHGDHVNNMAYIQQAANAAITGAIGSSGYACLSTSKKRKGSELCFGPTGKDAPFNGIAQFHQANNMLSSGASTSSPLPVAHVGSPAAPEPSKFSFRSLLADLIQMNDLKELCSVLVVLSSEASKNLAEQRIAVKQINDSLQISRASTGDRSQLQKTDAKAADVECESLNQGDRIVHHNSNSDSSDTTTARPMSPGTLALMCDEQDTMFTGAALAHGLAGHGCNTSSHMLDKSVSEVYIEQERIVLTKFRDCLNKLITPGEIKETNSVEARNENHSKNFTSNSGYRQRIISNGVIKNVALSAPRIPLIDAAAHHTSNKILTLPENGKE

Homology

[Close]

BLAST of CmaCh11G006190 vs. ExPASy Swiss-Prot
Match: Q9SZD1 (Protein tesmin/TSO1-like CXC 5 OS=Arabidopsis thaliana OX=3702 GN=TCX5 PE=1 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 9.2e-131
Identity = 252/456 (55.26%), Postives = 323/456 (70.83%), Query Frame = 0


Query: 489 PAVMVVQSPSQPKSPQHLMVLPVGTQSPHPVAARKPDFPKSRS--RSVETKDATPKKQKQ 548
           P + +  + S P S   ++  P+     HP+    P+ PK+R    +VE +D TP+K+KQ
Sbjct: 82  PTLPMATTMSNPPSQSQIVNAPI----RHPI----PESPKARGPRPNVEGRDGTPQKKKQ 141

Query: 549 CNCKHSRCLKLYCECFASGIYCDGCNCANCYNNVENEVSRREAVETTLERNPNAFRPKIA 608
           CNCKHSRCLKLYCECFASG YCDGCNC NC+NNV+NE +RREAVE TLERNP AFRPKIA
Sbjct: 142 CNCKHSRCLKLYCECFASGTYCDGCNCVNCFNNVDNEPARREAVEATLERNPFAFRPKIA 201

Query: 609 SSPHGPRESRDEIGEVVMLGKHNKGCHCKKSSCLKKYCECFQANILCSENCKCMDCKNFE 668
           SSPHG R+ R++IGEVV+LGKHNKGCHCKKS CLKKYCECFQANILCSENCKC+DCKNFE
Sbjct: 202 SSPHGGRDKREDIGEVVLLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCLDCKNFE 261

Query: 669 GSDERQALLHGDHVNNMAYIQQAANAAITGAIGSSGYACLSTSKKRKGSELCFGPTGKDA 728
           GS+ERQAL HG+H N+MAY+QQAANAAITGA+GSSG+A     K+RKG E+ F    KD+
Sbjct: 262 GSEERQALFHGEHSNHMAYLQQAANAAITGAVGSSGFAPSPAPKRRKGQEILFNQAIKDS 321

Query: 729 PFNGIAQFHQANNMLSSG-ASTSSPLPVAHVGSPAAPEPSKFSFRSLLADLIQMNDLKEL 788
             + ++ F Q NN  + G  S +SP PV+  G  A+  PSKF +RSLLAD+IQ +D++ L
Sbjct: 322 --SRLSHFPQVNNGRTGGPTSGTSPSPVSRAGGNASSVPSKFVYRSLLADIIQPHDVRAL 381

Query: 789 CSVLVVLSSEASKNLAEQRIAVK-QINDSLQISRASTGDRSQLQKTDAKAADVECESLNQ 848
           CSVLV ++ EA+K   ++R  ++ +++D  + S AS+         +A   ++     NQ
Sbjct: 382 CSVLVTVAGEAAKTSTDKRNEIENRVDDQTETSLASSAQDQPQGNNNAADVEMVATDHNQ 441

Query: 849 GDRIVHHNSNSDSSDTTTARPMSPGTLALMCDEQDTMFTGAALA--HGLAGHGCNTSSHM 908
            D+     SNSD  D +   P+SP TLALMCDEQDT+F  AA +    +  +GC  +S  
Sbjct: 442 ADKSGPEESNSDGVDASKVTPLSPATLALMCDEQDTIFMVAAPSPNGSVDPNGCRPNS-- 501

Query: 909 LDKSVSEVYIEQERIVLTKFRDCLNKLITPGEIKET 939
             +  SE+Y EQER+VLTKFRDCLN+LI+  EIKE+
Sbjct: 502 --QGQSEIYAEQERLVLTKFRDCLNRLISYAEIKES 523

[Close]

BLAST of CmaCh11G006190 vs. ExPASy Swiss-Prot
Match: Q9SL70 (Protein tesmin/TSO1-like CXC 6 OS=Arabidopsis thaliana OX=3702 GN=TCX6 PE=1 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.2e-117
Identity = 254/531 (47.83%), Postives = 332/531 (62.52%), Query Frame = 0


Query: 425 GEHPEMDDLPPPSAQTGSEEPDSVVAFDVTAKKLARQLDFAEFGGAVLPELPH---FQSQ 484
           GE  E D  PP + +   E           + K ARQLDF   GG+   E  H     S 
Sbjct: 2   GEGEEGDKFPPKTDEVTQE-----------SMKSARQLDFT--GGSSDVEHSHSNQASSM 61

Query: 485 SRCHSESPAVMVVQSPSQPKSPQHLMV-LPVGTQSPH-----PVAARKPDFPKSRSRSV- 544
           +     SP V V +     ++P  +   +P   QS       P+   +P+ P S  R   
Sbjct: 62  AAASIPSPIVTVTRPIITSQAPPTVATPIPPPPQSQGIILHVPIRHPRPESPNSMPRPAG 121

Query: 545 ETKDATPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCANCYNNVENEVSRREAVETTL 604
           ET+D TP+K+KQCNCKHSRCLKLYCECFASG YCDGCNC NC+NNVENE +RR+AVE+TL
Sbjct: 122 ETRDGTPQKKKQCNCKHSRCLKLYCECFASGTYCDGCNCVNCFNNVENEPARRQAVESTL 181

Query: 605 ERNPNAFRPKIASSPHGPRESRDEIGEVVMLGKHNKGCHCKKSSCLKKYCECFQANILCS 664
           ERNPNAFRPKIA+SPHG R++R+E+G+VVML +HNKGCHCKKS CLKKYCECFQANILCS
Sbjct: 182 ERNPNAFRPKIAASPHGGRDNREEVGDVVMLARHNKGCHCKKSGCLKKYCECFQANILCS 241

Query: 665 ENCKCMDCKNFEGSDERQALLHGDHVNNMAYIQQAANAAITGAIGSSGYACLSTSKKRKG 724
           ENCKC+DCKNFEGS+ RQ+L HG+H +N+AY+Q  ANAAITGAIGSSG+A     K+RKG
Sbjct: 242 ENCKCLDCKNFEGSEVRQSLFHGEHSHNLAYLQH-ANAAITGAIGSSGFASAPPPKRRKG 301

Query: 725 SELCFGPTGKDAPFNGIAQFHQANNMLSSGASTSSPLPVAHVGSPAAPEPSKFSFRSLLA 784
            E+ F    KD+  + +    QANN  ++ + T S       G  A+  PSK  ++SLLA
Sbjct: 302 QEIFFNQGTKDSSTHRLG---QANNGRTTSSQTGS-----RAGGNASLGPSKVVYKSLLA 361

Query: 785 DLIQMNDLKELCSVLVVLSSEASKNLAEQRIAVKQINDSLQISRASTGDRSQLQKTDAKA 844
           ++I+  D+K LCSVLV ++ EA+K L E+R+A                  +Q + + A +
Sbjct: 362 NIIKPMDVKALCSVLVAVAGEAAKTLTEKRLA------------------NQKETSVASS 421

Query: 845 ADVECESLNQGDRIVHHNSNSDSSDTTTARPMSPGTLALMCDEQDTMFTGAALAHGLAGH 904
              +    N+ ++    +SN+D S     R +SP TLALMCDE+DTM   A      A  
Sbjct: 422 VQDQGHVNNKAEKSGLEDSNADGS---KGRSLSPETLALMCDERDTMLMVA------ASP 481

Query: 905 GCNTS-SHMLDKSVSEVYIEQERIVLTKFRDCLNKLITPGEIKETNSVEAR 945
            C+   +  L     +VY EQE++VLTKFRDCLN++I+ GE+KE+N   +R
Sbjct: 482 NCSVEPTSQLPNGQDQVYAEQEKVVLTKFRDCLNRIISCGEVKESNCSMSR 483

[Close]

BLAST of CmaCh11G006190 vs. ExPASy Swiss-Prot
Match: F4JY84 (Protein tesmin/TSO1-like CXC 7 OS=Arabidopsis thaliana OX=3702 GN=TCX7 PE=1 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 2.1e-74
Identity = 177/456 (38.82%), Postives = 255/456 (55.92%), Query Frame = 0


Query: 488 SPAVMVVQSPSQPKSPQHLMVLPVGTQSPHPVAARKPDFPKSRSRS-VETKDATP-KKQK 547
           SP     QS ++   PQ   +   G            D   SR  + VE+K+ TP K+QK
Sbjct: 36  SPVKSSQQSETEVTPPQKPPLHQFGHNQVQKNRVSNQDPSTSRRHNEVESKENTPNKQQK 95

Query: 548 QCNCKHSRCLKLYCECFASGIYCDGCNCANCYNNVENEVSRREAVETTLERNPNAFRPKI 607
            CNCK+S+CLKLYCECFASG YC+GCNC NC+N +ENE SR+ A+   LERNP+AF+PKI
Sbjct: 96  HCNCKNSKCLKLYCECFASGSYCNGCNCVNCHNKLENESSRQVAISGILERNPDAFKPKI 155

Query: 608 ASSPHGPRESRDEIGEVVMLGKHNKGCHCKKSSCLKKYCECFQANILCSENCKCMDCKNF 667
           A SPHG ++ ++ + +V+++GKH+KGCHC+KS CLKKYCEC+QANILCSENC+C DCKNF
Sbjct: 156 AGSPHGMKDLQENVQQVLLIGKHSKGCHCRKSGCLKKYCECYQANILCSENCRCQDCKNF 215

Query: 668 EGSDERQALLHGDHVNNMAYIQQAANAAITGAIGSSGYACLSTSKKRKGSELCFGPTGKD 727
           EGS+ER+ALLHG  V++  YIQQ  NAA+  AI  S Y     S+KRK  ++       D
Sbjct: 216 EGSEERKALLHGSQVSD-TYIQQMTNAAVNRAIDMSAYLYPPESRKRKSKDI------SD 275

Query: 728 APFNGI-AQFHQANNMLSSGASTSSPLPVAHVGSPAAPEPSKFSFRSLLADLIQMNDLKE 787
           +  +    Q+ +AN++  +G ++   LP     + A    +  ++RS  ++  Q + ++E
Sbjct: 276 SVVSSYGVQYQRANHVRRNGENSLFSLP----NNKAVSGSTTSAYRSSWSNTFQPHHVRE 335

Query: 788 LCSVLVVLSSEASKNLAEQRIAVKQINDSLQISRASTGDRSQLQKTDAKAADVECESLNQ 847
           LCS+LV  S + +  L+++                  G ++    +    A      +N 
Sbjct: 336 LCSLLVSNSVDVANKLSDK------------------GRKNDKGPSSLDGAQRVANEIND 395

Query: 848 GDRIVHHNSNSDSSDTTTARPMSPGTLALMCDEQDTMFTGAALAHGLAGHGCNTSSHMLD 907
               V   +  D       +P+SP T ALMCDE+  + +    +  +      TS    D
Sbjct: 396 SPDCVLDANRMDE------KPISPATRALMCDEEHEIGSEKETSARV-----KTSQEKED 451

Query: 908 KSVSE-VYIEQERIVLTKFRDCLNKLITPGEIKETN 940
              S  +Y+EQER +L+ FRD L +L     I   N
Sbjct: 456 TDTSSGIYLEQERQILSIFRDYLIQLSNRARINGKN 451

[Close]

BLAST of CmaCh11G006190 vs. ExPASy Swiss-Prot
Match: Q571G4 (Protein lin-54 homolog OS=Mus musculus OX=10090 GN=Lin54 PE=2 SV=2)

HSP 1 Score: 163.7 bits (413), Expect = 1.1e-38
Identity = 74/153 (48.37%), Postives = 101/153 (66.01%), Query Frame = 0


Query: 538 DATPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCANCYNNVENEVSRREAVETTLERN 597
           ++T + +K CNC  S CLKLYC+CFA+G +C+ CNC NCYNN+E+E  R++A++  L+RN
Sbjct: 516 ESTSRPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRN 575

Query: 598 PNAFRPKIASSPHGPRESRDEIGEVVMLGKHNKGCHCKKSSCLKKYCECFQANILCSENC 657
           P AF+PKI     G  + R           H+KGC+CK+S CLK YCEC++A I+CS  C
Sbjct: 576 PEAFKPKIGKGKEGESDRR-----------HSKGCNCKRSGCLKNYCECYEAKIMCSSIC 635

Query: 658 KCMDCKNFEGSDERQALLHGDHVNNMAYIQQAA 691
           KC+ CKNFE S ER+ L+H      +   QQ A
Sbjct: 636 KCIGCKNFEESPERKTLMHLADAAEVRVQQQTA 657

[Close]

BLAST of CmaCh11G006190 vs. ExPASy Swiss-Prot
Match: Q0IHV2 (Protein lin-54 homolog OS=Xenopus tropicalis OX=8364 GN=lin54 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.4e-38
Identity = 74/164 (45.12%), Postives = 104/164 (63.41%), Query Frame = 0


Query: 527 PKSRSRSVETKDATPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCANCYNNVENEVSR 586
           P+     + + ++  + +K CNC  S CLKLYC+CFA+G +C+ CNC NCYNN+E+E  R
Sbjct: 497 PRGPLNGIISSESASRPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENER 556

Query: 587 REAVETTLERNPNAFRPKIASSPHGPRESRDEIGEVVMLGKHNKGCHCKKSSCLKKYCEC 646
           ++A++  L+RNP AF+PKI     G  + R           H+KGC+CK+S CLK YCEC
Sbjct: 557 QKAIKACLDRNPEAFKPKIGKGKEGESDRR-----------HSKGCNCKRSGCLKNYCEC 616

Query: 647 FQANILCSENCKCMDCKNFEGSDERQALLHGDHVNNMAYIQQAA 691
           ++A I+CS  CKC+ CKNFE S ER+ L+H      +   QQ A
Sbjct: 617 YEAKIMCSSICKCIGCKNFEESPERKTLMHLADAAEVRVQQQTA 649

[Close]

BLAST of CmaCh11G006190 vs. TAIR 10
Match: AT4G29000.1 (Tesmin/TSO1-like CXC domain-containing protein )

HSP 1 Score: 469.5 bits (1207), Expect = 6.5e-132
Identity = 252/456 (55.26%), Postives = 323/456 (70.83%), Query Frame = 0


Query: 489 PAVMVVQSPSQPKSPQHLMVLPVGTQSPHPVAARKPDFPKSRS--RSVETKDATPKKQKQ 548
           P + +  + S P S   ++  P+     HP+    P+ PK+R    +VE +D TP+K+KQ
Sbjct: 82  PTLPMATTMSNPPSQSQIVNAPI----RHPI----PESPKARGPRPNVEGRDGTPQKKKQ 141

Query: 549 CNCKHSRCLKLYCECFASGIYCDGCNCANCYNNVENEVSRREAVETTLERNPNAFRPKIA 608
           CNCKHSRCLKLYCECFASG YCDGCNC NC+NNV+NE +RREAVE TLERNP AFRPKIA
Sbjct: 142 CNCKHSRCLKLYCECFASGTYCDGCNCVNCFNNVDNEPARREAVEATLERNPFAFRPKIA 201

Query: 609 SSPHGPRESRDEIGEVVMLGKHNKGCHCKKSSCLKKYCECFQANILCSENCKCMDCKNFE 668
           SSPHG R+ R++IGEVV+LGKHNKGCHCKKS CLKKYCECFQANILCSENCKC+DCKNFE
Sbjct: 202 SSPHGGRDKREDIGEVVLLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCLDCKNFE 261

Query: 669 GSDERQALLHGDHVNNMAYIQQAANAAITGAIGSSGYACLSTSKKRKGSELCFGPTGKDA 728
           GS+ERQAL HG+H N+MAY+QQAANAAITGA+GSSG+A     K+RKG E+ F    KD+
Sbjct: 262 GSEERQALFHGEHSNHMAYLQQAANAAITGAVGSSGFAPSPAPKRRKGQEILFNQAIKDS 321

Query: 729 PFNGIAQFHQANNMLSSG-ASTSSPLPVAHVGSPAAPEPSKFSFRSLLADLIQMNDLKEL 788
             + ++ F Q NN  + G  S +SP PV+  G  A+  PSKF +RSLLAD+IQ +D++ L
Sbjct: 322 --SRLSHFPQVNNGRTGGPTSGTSPSPVSRAGGNASSVPSKFVYRSLLADIIQPHDVRAL 381

Query: 789 CSVLVVLSSEASKNLAEQRIAVK-QINDSLQISRASTGDRSQLQKTDAKAADVECESLNQ 848
           CSVLV ++ EA+K   ++R  ++ +++D  + S AS+         +A   ++     NQ
Sbjct: 382 CSVLVTVAGEAAKTSTDKRNEIENRVDDQTETSLASSAQDQPQGNNNAADVEMVATDHNQ 441

Query: 849 GDRIVHHNSNSDSSDTTTARPMSPGTLALMCDEQDTMFTGAALA--HGLAGHGCNTSSHM 908
            D+     SNSD  D +   P+SP TLALMCDEQDT+F  AA +    +  +GC  +S  
Sbjct: 442 ADKSGPEESNSDGVDASKVTPLSPATLALMCDEQDTIFMVAAPSPNGSVDPNGCRPNS-- 501

Query: 909 LDKSVSEVYIEQERIVLTKFRDCLNKLITPGEIKET 939
             +  SE+Y EQER+VLTKFRDCLN+LI+  EIKE+
Sbjct: 502 --QGQSEIYAEQERLVLTKFRDCLNRLISYAEIKES 523

[Close]

BLAST of CmaCh11G006190 vs. TAIR 10
Match: AT2G20110.1 (Tesmin/TSO1-like CXC domain-containing protein )

HSP 1 Score: 426.0 bits (1094), Expect = 8.3e-119
Identity = 254/531 (47.83%), Postives = 332/531 (62.52%), Query Frame = 0


Query: 425 GEHPEMDDLPPPSAQTGSEEPDSVVAFDVTAKKLARQLDFAEFGGAVLPELPH---FQSQ 484
           GE  E D  PP + +   E           + K ARQLDF   GG+   E  H     S 
Sbjct: 2   GEGEEGDKFPPKTDEVTQE-----------SMKSARQLDFT--GGSSDVEHSHSNQASSM 61

Query: 485 SRCHSESPAVMVVQSPSQPKSPQHLMV-LPVGTQSPH-----PVAARKPDFPKSRSRSV- 544
           +     SP V V +     ++P  +   +P   QS       P+   +P+ P S  R   
Sbjct: 62  AAASIPSPIVTVTRPIITSQAPPTVATPIPPPPQSQGIILHVPIRHPRPESPNSMPRPAG 121

Query: 545 ETKDATPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCANCYNNVENEVSRREAVETTL 604
           ET+D TP+K+KQCNCKHSRCLKLYCECFASG YCDGCNC NC+NNVENE +RR+AVE+TL
Sbjct: 122 ETRDGTPQKKKQCNCKHSRCLKLYCECFASGTYCDGCNCVNCFNNVENEPARRQAVESTL 181

Query: 605 ERNPNAFRPKIASSPHGPRESRDEIGEVVMLGKHNKGCHCKKSSCLKKYCECFQANILCS 664
           ERNPNAFRPKIA+SPHG R++R+E+G+VVML +HNKGCHCKKS CLKKYCECFQANILCS
Sbjct: 182 ERNPNAFRPKIAASPHGGRDNREEVGDVVMLARHNKGCHCKKSGCLKKYCECFQANILCS 241

Query: 665 ENCKCMDCKNFEGSDERQALLHGDHVNNMAYIQQAANAAITGAIGSSGYACLSTSKKRKG 724
           ENCKC+DCKNFEGS+ RQ+L HG+H +N+AY+Q  ANAAITGAIGSSG+A     K+RKG
Sbjct: 242 ENCKCLDCKNFEGSEVRQSLFHGEHSHNLAYLQH-ANAAITGAIGSSGFASAPPPKRRKG 301

Query: 725 SELCFGPTGKDAPFNGIAQFHQANNMLSSGASTSSPLPVAHVGSPAAPEPSKFSFRSLLA 784
            E+ F    KD+  + +    QANN  ++ + T S       G  A+  PSK  ++SLLA
Sbjct: 302 QEIFFNQGTKDSSTHRLG---QANNGRTTSSQTGS-----RAGGNASLGPSKVVYKSLLA 361

Query: 785 DLIQMNDLKELCSVLVVLSSEASKNLAEQRIAVKQINDSLQISRASTGDRSQLQKTDAKA 844
           ++I+  D+K LCSVLV ++ EA+K L E+R+A                  +Q + + A +
Sbjct: 362 NIIKPMDVKALCSVLVAVAGEAAKTLTEKRLA------------------NQKETSVASS 421

Query: 845 ADVECESLNQGDRIVHHNSNSDSSDTTTARPMSPGTLALMCDEQDTMFTGAALAHGLAGH 904
              +    N+ ++    +SN+D S     R +SP TLALMCDE+DTM   A      A  
Sbjct: 422 VQDQGHVNNKAEKSGLEDSNADGS---KGRSLSPETLALMCDERDTMLMVA------ASP 481

Query: 905 GCNTS-SHMLDKSVSEVYIEQERIVLTKFRDCLNKLITPGEIKETNSVEAR 945
            C+   +  L     +VY EQE++VLTKFRDCLN++I+ GE+KE+N   +R
Sbjct: 482 NCSVEPTSQLPNGQDQVYAEQEKVVLTKFRDCLNRIISCGEVKESNCSMSR 483

[Close]

BLAST of CmaCh11G006190 vs. TAIR 10
Match: AT2G20110.2 (Tesmin/TSO1-like CXC domain-containing protein )

HSP 1 Score: 421.4 bits (1082), Expect = 2.0e-117
Identity = 251/523 (47.99%), Postives = 327/523 (62.52%), Query Frame = 0


Query: 425 GEHPEMDDLPPPSAQTGSEEPDSVVAFDVTAKKLARQLDFAEFGGAVLPELPH---FQSQ 484
           GE  E D  PP + +   E           + K ARQLDF   GG+   E  H     S 
Sbjct: 2   GEGEEGDKFPPKTDEVTQE-----------SMKSARQLDFT--GGSSDVEHSHSNQASSM 61

Query: 485 SRCHSESPAVMVVQSPSQPKSPQHLMV-LPVGTQSPH-----PVAARKPDFPKSRSRSV- 544
           +     SP V V +     ++P  +   +P   QS       P+   +P+ P S  R   
Sbjct: 62  AAASIPSPIVTVTRPIITSQAPPTVATPIPPPPQSQGIILHVPIRHPRPESPNSMPRPAG 121

Query: 545 ETKDATPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCANCYNNVENEVSRREAVETTL 604
           ET+D TP+K+KQCNCKHSRCLKLYCECFASG YCDGCNC NC+NNVENE +RR+AVE+TL
Sbjct: 122 ETRDGTPQKKKQCNCKHSRCLKLYCECFASGTYCDGCNCVNCFNNVENEPARRQAVESTL 181

Query: 605 ERNPNAFRPKIASSPHGPRESRDEIGEVVMLGKHNKGCHCKKSSCLKKYCECFQANILCS 664
           ERNPNAFRPKIA+SPHG R++R+E+G+VVML +HNKGCHCKKS CLKKYCECFQANILCS
Sbjct: 182 ERNPNAFRPKIAASPHGGRDNREEVGDVVMLARHNKGCHCKKSGCLKKYCECFQANILCS 241

Query: 665 ENCKCMDCKNFEGSDERQALLHGDHVNNMAYIQQAANAAITGAIGSSGYACLSTSKKRKG 724
           ENCKC+DCKNFEGS+ RQ+L HG+H +N+AY+Q  ANAAITGAIGSSG+A     K+RKG
Sbjct: 242 ENCKCLDCKNFEGSEVRQSLFHGEHSHNLAYLQH-ANAAITGAIGSSGFASAPPPKRRKG 301

Query: 725 SELCFGPTGKDAPFNGIAQFHQANNMLSSGASTSSPLPVAHVGSPAAPEPSKFSFRSLLA 784
            E+ F    KD+  + +    QANN  ++ + T S       G  A+  PSK  ++SLLA
Sbjct: 302 QEIFFNQGTKDSSTHRLG---QANNGRTTSSQTGS-----RAGGNASLGPSKVVYKSLLA 361

Query: 785 DLIQMNDLKELCSVLVVLSSEASKNLAEQRIAVKQINDSLQISRASTGDRSQLQKTDAKA 844
           ++I+  D+K LCSVLV ++ EA+K L E+R+A                  +Q + + A +
Sbjct: 362 NIIKPMDVKALCSVLVAVAGEAAKTLTEKRLA------------------NQKETSVASS 421

Query: 845 ADVECESLNQGDRIVHHNSNSDSSDTTTARPMSPGTLALMCDEQDTMFTGAALAHGLAGH 904
              +    N+ ++    +SN+D S     R +SP TLALMCDE+DTM   A      A  
Sbjct: 422 VQDQGHVNNKAEKSGLEDSNADGS---KGRSLSPETLALMCDERDTMLMVA------ASP 475

Query: 905 GCNTS-SHMLDKSVSEVYIEQERIVLTKFRDCLNKLITPGEIK 937
            C+   +  L     +VY EQE++VLTKFRDCLN++I+ GE+K
Sbjct: 482 NCSVEPTSQLPNGQDQVYAEQEKVVLTKFRDCLNRIISCGEVK 475

[Close]

BLAST of CmaCh11G006190 vs. TAIR 10
Match: AT5G25790.1 (Tesmin/TSO1-like CXC domain-containing protein )

HSP 1 Score: 282.3 bits (721), Expect = 1.5e-75
Identity = 177/456 (38.82%), Postives = 255/456 (55.92%), Query Frame = 0


Query: 488 SPAVMVVQSPSQPKSPQHLMVLPVGTQSPHPVAARKPDFPKSRSRS-VETKDATP-KKQK 547
           SP     QS ++   PQ   +   G            D   SR  + VE+K+ TP K+QK
Sbjct: 36  SPVKSSQQSETEVTPPQKPPLHQFGHNQVQKNRVSNQDPSTSRRHNEVESKENTPNKQQK 95

Query: 548 QCNCKHSRCLKLYCECFASGIYCDGCNCANCYNNVENEVSRREAVETTLERNPNAFRPKI 607
            CNCK+S+CLKLYCECFASG YC+GCNC NC+N +ENE SR+ A+   LERNP+AF+PKI
Sbjct: 96  HCNCKNSKCLKLYCECFASGSYCNGCNCVNCHNKLENESSRQVAISGILERNPDAFKPKI 155

Query: 608 ASSPHGPRESRDEIGEVVMLGKHNKGCHCKKSSCLKKYCECFQANILCSENCKCMDCKNF 667
           A SPHG ++ ++ + +V+++GKH+KGCHC+KS CLKKYCEC+QANILCSENC+C DCKNF
Sbjct: 156 AGSPHGMKDLQENVQQVLLIGKHSKGCHCRKSGCLKKYCECYQANILCSENCRCQDCKNF 215

Query: 668 EGSDERQALLHGDHVNNMAYIQQAANAAITGAIGSSGYACLSTSKKRKGSELCFGPTGKD 727
           EGS+ER+ALLHG  V++  YIQQ  NAA+  AI  S Y     S+KRK  ++       D
Sbjct: 216 EGSEERKALLHGSQVSD-TYIQQMTNAAVNRAIDMSAYLYPPESRKRKSKDI------SD 275

Query: 728 APFNGI-AQFHQANNMLSSGASTSSPLPVAHVGSPAAPEPSKFSFRSLLADLIQMNDLKE 787
           +  +    Q+ +AN++  +G ++   LP     + A    +  ++RS  ++  Q + ++E
Sbjct: 276 SVVSSYGVQYQRANHVRRNGENSLFSLP----NNKAVSGSTTSAYRSSWSNTFQPHHVRE 335

Query: 788 LCSVLVVLSSEASKNLAEQRIAVKQINDSLQISRASTGDRSQLQKTDAKAADVECESLNQ 847
           LCS+LV  S + +  L+++                  G ++    +    A      +N 
Sbjct: 336 LCSLLVSNSVDVANKLSDK------------------GRKNDKGPSSLDGAQRVANEIND 395

Query: 848 GDRIVHHNSNSDSSDTTTARPMSPGTLALMCDEQDTMFTGAALAHGLAGHGCNTSSHMLD 907
               V   +  D       +P+SP T ALMCDE+  + +    +  +      TS    D
Sbjct: 396 SPDCVLDANRMDE------KPISPATRALMCDEEHEIGSEKETSARV-----KTSQEKED 451

Query: 908 KSVSE-VYIEQERIVLTKFRDCLNKLITPGEIKETN 940
              S  +Y+EQER +L+ FRD L +L     I   N
Sbjct: 456 TDTSSGIYLEQERQILSIFRDYLIQLSNRARINGKN 451

[Close]

BLAST of CmaCh11G006190 vs. TAIR 10
Match: AT4G28990.1 (RNA-binding protein-related )

HSP 1 Score: 202.6 bits (514), Expect = 1.5e-51
Identity = 157/373 (42.09%), Postives = 195/373 (52.28%), Query Frame = 0


Query: 52  MGSRDKDSTT-NHQPLLSSLVVRPSNSDGVGATSGGRVGRGSDYEAGEVPRDPPQYSRLD 111
           MGS +K+ TT +H P +SSLVVRPS S+       GR   G DYE GEV RD P ++R D
Sbjct: 1   MGSTEKEQTTQHHPPHISSLVVRPSGSND---REDGRNAAG-DYEPGEVSRDRPSFNRSD 60

Query: 112 RYSADL-GYRIHAGSASPTRH-RDDQRYVSDFDRSGDLMRGREFGGRSD-HGRYRETSPH 171
           RY  D  G+R  A S+SP R   +D ++ SD + SG   RGRE   R +  GR+R+ SP 
Sbjct: 61  RYKGDNGGHRTRASSSSPGRRGYEDHKHGSDLNHSGVPPRGRELSSRREAPGRHRDYSPP 120

Query: 172 YSRRISGGRPYGRGFDSPGLAPGPFRGERSNNPNVRPRDGDWYCSDPLCDNLNFGRREFC 231
            +R  +G RPY RG D P    G     R+N   V+PR+GDWYC DPLC NLNF RRE C
Sbjct: 121 LARGGAGARPYRRGLDGPEPPHGRDGMSRNNISKVQPREGDWYCLDPLCRNLNFARRESC 180

Query: 232 NKCNRPRTGAGGRPRRGHVGGPPSLHSPPRRFTAHPIERSPGRTPNEYRSPPRAWTRGCS 291
            KC R R      P    +  PP  HSP R F             N YRSPPR W R   
Sbjct: 181 YKCKRHRYAPANSPPLPRLLPPPMNHSPRRDF-------------NGYRSPPRGWPR--- 240

Query: 292 RDIAAGGLAPQRYEN-RYSDLRRDRVDYLEDSFRGRSKFDRPILSDWPLRDHERDEFIPE 351
                    P R+++  + D  RDR  Y +  +       R I SDW        E +P 
Sbjct: 241 ------DYPPPRHDHPTWRDRERDRPHYSDHEYPP----SRRIASDW-----AHTEPLP- 300

Query: 352 RKGFERRPPSPPLPLLPQRGRWARDVRERSRS-PIRDPIRSPLR----VSLRSPRGLPP- 411
           +  ++RRPP  P    P+ GRW R +RERSRS P+RD    PLR     SLR   G PP 
Sbjct: 301 KPHYDRRPPLSP----PRGGRWGRVLRERSRSPPLRDVPPPPLRDGPPPSLRG--GGPPL 331

Query: 412 -KDFRRDVFVERE 413
            +D+RRD   +RE
Sbjct: 361 HRDYRRDSHFDRE 331

The following BLAST results are available for this feature:

BLAST of CmaCh11G006190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZD1	9.2e-131	55.26	Protein tesmin/TSO1-like CXC 5 OS=Arabidopsis thaliana OX=3702 GN=TCX5 PE=1 SV=1	[more]
Q9SL70	1.2e-117	47.83	Protein tesmin/TSO1-like CXC 6 OS=Arabidopsis thaliana OX=3702 GN=TCX6 PE=1 SV=1	[more]
F4JY84	2.1e-74	38.82	Protein tesmin/TSO1-like CXC 7 OS=Arabidopsis thaliana OX=3702 GN=TCX7 PE=1 SV=1	[more]
Q571G4	1.1e-38	48.37	Protein lin-54 homolog OS=Mus musculus OX=10090 GN=Lin54 PE=2 SV=2	[more]
Q0IHV2	2.4e-38	45.12	Protein lin-54 homolog OS=Xenopus tropicalis OX=8364 GN=lin54 PE=2 SV=1	[more]

BLAST of CmaCh11G006190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29000.1	6.5e-132	55.26	Tesmin/TSO1-like CXC domain-containing protein	[more]
AT2G20110.1	8.3e-119	47.83	Tesmin/TSO1-like CXC domain-containing protein	[more]
AT2G20110.2	2.0e-117	47.99	Tesmin/TSO1-like CXC domain-containing protein	[more]
AT5G25790.1	1.5e-75	38.82	Tesmin/TSO1-like CXC domain-containing protein	[more]
AT4G28990.1	1.5e-51	42.09	RNA-binding protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033467	Tesmin/TSO1-like CXC domain	SMART	SM01114	CXC_2	coord: 542..582 e-value: 3.2E-15 score: 66.6 coord: 627..668 e-value: 3.3E-19 score: 79.8
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 207..233 e-value: 0.002 score: 27.4
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 209..230
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 205..236 score: 9.2807
None	No IPR available	GENE3D	4.10.1060.10		coord: 196..236 e-value: 2.1E-11 score: 44.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 846..864
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..403
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 594..616
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 416..431
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 515..537
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 843..864
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 523..537
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 416..445
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 367..382
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..169
None	No IPR available	PANTHER	PTHR12446:SF49	PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1	coord: 482..962
IPR005172	CRC domain	PFAM	PF03638	TCR	coord: 544..579 e-value: 2.4E-10 score: 40.5 coord: 630..664 e-value: 9.2E-12 score: 45.1
IPR005172	CRC domain	PROSITE	PS51634	CRC	coord: 543..667 score: 36.43457
IPR028307	Lin-54 family	PANTHER	PTHR12446	TESMIN/TSO1-RELATED	coord: 482..962
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 198..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G006190.1	CmaCh11G006190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding