Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAAGACGTTATCTTCAATCTTCTTTCCATATTGGGCAAGAATTCATTTTCTACTTCGATTCCGCTCCCATTCTGCAATTTCAACTGCAGCTATAATGGCGTCATTTTCCAAATTCGAGTACACAGATTGTAGAACACACAAATTTGATGCTCCCTACAGGCAAACCTACGATTTTTCCGCGAAGAAGCCTACAGACCATCTGTGTATGTTTTAGTTCTCTACTTTAGGGTCACTCTCTATCCGGGCGCTCTGATTTTTGCTTCTATTTTCAAGTTTCATGAAGACACGGCTTAAATTTTTGCTTCTTTTTGTCTTTAGACATAAGGGGAAAATTATGTTCATCTCACAATGCAAGAAGTTTAGTATCTCAGTGCAAGCTGCTTAAGCCGATCGTTTTTTCTGGCTCTCCTTCTGCAATCACCTCAAGGTATGATGTTAAACATGTGACTATTGCTTCATATTGTCTAGAATTCCTTTCATGAAAGTTCATTCCCCCTTATATTTAGACTTACTTGTTCTTCCTCATGCTTATTGGTTACGTTCATAGATTTAGTTAGATTGGAGACTGTACCTTATAATAACACATATTGAACTATCAACTCAGGAAGCTCCAAATTCTGTGCAAAGCTGCAAATGATGTCTCTGGAGATATCCCTGATGGTAATTCTCCAAGTGGAATGAGTCTGTACGAAAGAACTATTGAAACTTTAACCACACTTTTTCCTCTGTGGGTAATGCTTATTAGTTCTGTTTTTGTGAATCTGGATTTAGTGCATTTGTGTTCTGGAGCTTTGCCTTTTAATTCCTGAGTTTGCCACCTATGAACAGGTTATCCTTGGAACCATTATCGGCATCTACAAACCTGCTGCAGTAATTGCTCATTCTTGGTTCTTCTTGATTGATGATTGGTGAATCTACTGGTACTCATCAGCCTCCCCTTGCAGGTAACTTGGTTGGAGACTGATCTTTTTACCCTGGGATTGGGTTTTCTTATGCTTTCGATGGGATTGACATTGACATTTGAGGATTTCAGGCGTTGTTTGAGAAATCCATGGACTGTAAGAGACATCCTTCTACTAACCAAATGGATGTACTTACGTAGTTGTGTTATTTAGCATCTATTTTCCTGGTGCAGGTAGGTGTAGGATTTCTTGCCCAGTACTTAATTAAACCTCTGCTTGGCTTTACTATCTCCATGGTAATAACTATGATGAAATGTTATAGCTCAATATTATGCTGAAATGATAGAACAGGCAAAGATAACAACCAATTTATGTGTGTTTCAGACTCTCAAACTGTCTGCACCTCTTGCAACTGGTCTTATTTTGGTCTCATGCTGCCCTGGGGGACAGGCATCCAATGTTGCTACTTATATATCTAAAGGAAATGTCGCACTTTCGGTTCTTATGACAACGTATGACCAGTTTGGATCATAAGATGCTCCTGTCCTGTCCTCAGTTTGCATAACAGTTTGATTTTTGTCTGCCTATGGTTGTCCCTACTAACTGGAATTTATACAGGTGTTCAACTATTGGTGCTATTGTCATGACGCCATTGCTTACCAAGCTTCTTGCTGGCCAACTAGTCCCAGTTGATGCTGCTGTAAGTTCAGATAAGCTAACCTTTCCAAGTATACATTCGTTGAGGTTTTCGATCGTCTTAGACTGATGATCTTTAGATTAAATCTCGGTAATAATAACTATGAGATCACACATCGGTTGAAGAGGAGAATGAAACATTCTTTATAAAAGTGTGGAAACCTCTCCTAAAAGACGCGTTTTAAAACCGCTAGGTTGACAGCGATACGTAACGGGCCAATGCGGACAATATCTACTAGTGGTGCTTGGGTTGTTATAAATGGTATCAGAGTCAGACACCGAGCAGTGCGACAGCGAGGATGCTGGGCTCCTAAGAGGGTGGATTGTGAGATCTAACATCGGTTGGAGTTGGAGAGAAGAATGAAACATTTCTTATAAGAGTGTGGAAACCTCTCCCTAAGAACGTGTTTTAAAACTATTAGGCCGACATCAATACGTAACGAGCCAAAACGGACAATATCTGCTAGGGTAGACTTGGGCTGGACTGAGGCTTAAATGTTTCATATATCATATGATCCTGTAGCCATTTATGAGTTCAGAGTTCCCTGATCGGACCCTTCAATTATTTTGGGCGAAAGTTGTCATTATTTTGATTGTTATTCTTTCAGGGTCTTGCTATCAGCACTTTTCAGGTGGTCTTGGTTCCAACTGTAATTGGAGGTAAGTTCATAACAAAAATTCCCCTCAAGAGTTAATCATCCTGAACCATCATTACTCTTATATGCAGTTTTAGCTAATGAATTCTTCCCCAAATTCACTGCAAAGATAATCACAGTGACACCTTTAATTGGAGTTATCCTCACAACTCTCCTGTGTGCCAGCCCTGTAAGTTTCAAAAGTATTATGCAGTGTAAGAGATTGAGTTTACACTGTTTCATTGTAGTAATGTCCTTTCGTCAATGTTTCTGATGATGAAGATCGGGCAAGTAGCAGAAGTTTTGAAAACTCAAGGAGCGCAGCTATTGCTCCCAGTAGCCGTCCTCCATGGTGCTGCATTTGCTCTGGGTTATTGGCTTTCAAAAATATCATTTGGAGAATCCACCTCCCGCACGATTTCAATAGAATGTGGGATGCAGGTAACAATTGCAGAGAGTTTTTCTAGAAATGCTATTCTATGGTTTTGATTTGCAACATGTCATTATTTGCAGAGCTCTGCACTCGGGTTTTTACTTGCTCAAAAGCATTTCACAAACCCCCTCGTCGCCGTTCCATCGGCAGTTAGCGTCGTTTGTATGGCGGTAAGAGTTTCCCCTCTGTTTATCTGCTCTGTTCTTTGTTTTCCTCCTTACCCCATGGATCCATTTGTTAAGAAACTTGTGTTCAAACATTTATGATGCTCATTTGCTATCATCTCAACAGCTTGGTGGCAGTGCTCTTGCAGTCTTCTGGAGGAACATGCCAATTCCGGCCGACGACAAAGATGATTTCCAAGAATGA
mRNA sequence
CGAAGACGTTATCTTCAATCTTCTTTCCATATTGGGCAAGAATTCATTTTCTACTTCGATTCCGCTCCCATTCTGCAATTTCAACTGCAGCTATAATGGCGTCATTTTCCAAATTCGAGTACACAGATTGTAGAACACACAAATTTGATGCTCCCTACAGGCAAACCTACGATTTTTCCGCGAAGAAGCCTACAGACCATCTGTACATAAGGGGAAAATTATGTTCATCTCACAATGCAAGAAGTTTAGTATCTCAGTGCAAGCTGCTTAAGCCGATCGTTTTTTCTGGCTCTCCTTCTGCAATCACCTCAAGGAAGCTCCAAATTCTGTGCAAAGCTGCAAATGATGTCTCTGGAGATATCCCTGATGGTAATTCTCCAAGTGGAATGAGTCTGTACGAAAGAACTATTGAAACTTTAACCACACTTTTTCCTCTGTGGGTTATCCTTGGAACCATTATCGGCATCTACAAACCTGCTGCAGTAACTTGGTTGGAGACTGATCTTTTTACCCTGGGATTGGGTTTTCTTATGCTTTCGATGGGATTGACATTGACATTTGAGGATTTCAGGCGTTGTTTGAGAAATCCATGGACTGTAGGTGTAGGATTTCTTGCCCAGTACTTAATTAAACCTCTGCTTGGCTTTACTATCTCCATGACTCTCAAACTGTCTGCACCTCTTGCAACTGGTCTTATTTTGGTCTCATGCTGCCCTGGGGGACAGGCATCCAATGTTGCTACTTATATATCTAAAGGAAATGTCGCACTTTCGGTTCTTATGACAACGTGTTCAACTATTGGTGCTATTGTCATGACGCCATTGCTTACCAAGCTTCTTGCTGGCCAACTAGTCCCAGTTGATGCTGCTGGTCTTGCTATCAGCACTTTTCAGGTGGTCTTGGTTCCAACTGTAATTGGAGTTTTAGCTAATGAATTCTTCCCCAAATTCACTGCAAAGATAATCACAGTGACACCTTTAATTGGAGTTATCCTCACAACTCTCCTGTGTGCCAGCCCTATCGGGCAAGTAGCAGAAGTTTTGAAAACTCAAGGAGCGCAGCTATTGCTCCCAGTAGCCGTCCTCCATGGTGCTGCATTTGCTCTGGGTTATTGGCTTTCAAAAATATCATTTGGAGAATCCACCTCCCGCACGATTTCAATAGAATGTGGGATGCAGAGCTCTGCACTCGGGTTTTTACTTGCTCAAAAGCATTTCACAAACCCCCTCGTCGCCGTTCCATCGGCAGTTAGCGTCGTTTGTATGGCGCTTGGTGGCAGTGCTCTTGCAGTCTTCTGGAGGAACATGCCAATTCCGGCCGACGACAAAGATGATTTCCAAGAATGA
Coding sequence (CDS)
ATGGCGTCATTTTCCAAATTCGAGTACACAGATTGTAGAACACACAAATTTGATGCTCCCTACAGGCAAACCTACGATTTTTCCGCGAAGAAGCCTACAGACCATCTGTACATAAGGGGAAAATTATGTTCATCTCACAATGCAAGAAGTTTAGTATCTCAGTGCAAGCTGCTTAAGCCGATCGTTTTTTCTGGCTCTCCTTCTGCAATCACCTCAAGGAAGCTCCAAATTCTGTGCAAAGCTGCAAATGATGTCTCTGGAGATATCCCTGATGGTAATTCTCCAAGTGGAATGAGTCTGTACGAAAGAACTATTGAAACTTTAACCACACTTTTTCCTCTGTGGGTTATCCTTGGAACCATTATCGGCATCTACAAACCTGCTGCAGTAACTTGGTTGGAGACTGATCTTTTTACCCTGGGATTGGGTTTTCTTATGCTTTCGATGGGATTGACATTGACATTTGAGGATTTCAGGCGTTGTTTGAGAAATCCATGGACTGTAGGTGTAGGATTTCTTGCCCAGTACTTAATTAAACCTCTGCTTGGCTTTACTATCTCCATGACTCTCAAACTGTCTGCACCTCTTGCAACTGGTCTTATTTTGGTCTCATGCTGCCCTGGGGGACAGGCATCCAATGTTGCTACTTATATATCTAAAGGAAATGTCGCACTTTCGGTTCTTATGACAACGTGTTCAACTATTGGTGCTATTGTCATGACGCCATTGCTTACCAAGCTTCTTGCTGGCCAACTAGTCCCAGTTGATGCTGCTGGTCTTGCTATCAGCACTTTTCAGGTGGTCTTGGTTCCAACTGTAATTGGAGTTTTAGCTAATGAATTCTTCCCCAAATTCACTGCAAAGATAATCACAGTGACACCTTTAATTGGAGTTATCCTCACAACTCTCCTGTGTGCCAGCCCTATCGGGCAAGTAGCAGAAGTTTTGAAAACTCAAGGAGCGCAGCTATTGCTCCCAGTAGCCGTCCTCCATGGTGCTGCATTTGCTCTGGGTTATTGGCTTTCAAAAATATCATTTGGAGAATCCACCTCCCGCACGATTTCAATAGAATGTGGGATGCAGAGCTCTGCACTCGGGTTTTTACTTGCTCAAAAGCATTTCACAAACCCCCTCGTCGCCGTTCCATCGGCAGTTAGCGTCGTTTGTATGGCGCTTGGTGGCAGTGCTCTTGCAGTCTTCTGGAGGAACATGCCAATTCCGGCCGACGACAAAGATGATTTCCAAGAATGA
Protein sequence
MASFSKFEYTDCRTHKFDAPYRQTYDFSAKKPTDHLYIRGKLCSSHNARSLVSQCKLLKPIVFSGSPSAITSRKLQILCKAANDVSGDIPDGNSPSGMSLYERTIETLTTLFPLWVILGTIIGIYKPAAVTWLETDLFTLGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYLIKPLLGFTISMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTFQVVLVPTVIGVLANEFFPKFTAKIITVTPLIGVILTTLLCASPIGQVAEVLKTQGAQLLLPVAVLHGAAFALGYWLSKISFGESTSRTISIECGMQSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGSALAVFWRNMPIPADDKDDFQE
Homology
BLAST of CmaCh11G005870 vs. ExPASy Swiss-Prot
Match:
Q1EBV7 (Sodium/pyruvate cotransporter BASS2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BASS2 PE=1 SV=1)
HSP 1 Score: 593.6 bits (1529), Expect = 1.8e-168
Identity = 321/416 (77.16%), Postives = 358/416 (86.06%), Query Frame = 0
Query: 1 MASFSKFEYTDCRTHKFDAPYRQTYDFSAKKPTDHLYIRGKLCSSHNARSLVSQCKLLKP 60
MAS S+ TD R + ++ S + HL + S++ SL Q KP
Sbjct: 1 MASISRILPTDGRLSQ--CRINTSWVPSTTRTQTHLDFPKLVSVSNSGISLRIQNS--KP 60
Query: 61 IVFSGSPSAITSRKLQILCKAANDVSGDIPDGNSPSGMSLYERTIETLTTLFPLWVILGT 120
I + A +SR+ ++CKAA VSGD+P+ ++P +S YE+ IE LTTLFPLWVILGT
Sbjct: 61 ISPVFALEATSSRR--VVCKAAAGVSGDLPE-STPKELSQYEKIIELLTTLFPLWVILGT 120
Query: 121 IIGIYKPAAVTWLETDLFTLGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYLIKP 180
++GI+KP+ VTWLETDLFTLGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQY+IKP
Sbjct: 121 LVGIFKPSLVTWLETDLFTLGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYMIKP 180
Query: 181 LLGFTISMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVM 240
+LGF I+MTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAI+M
Sbjct: 181 ILGFLIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIIM 240
Query: 241 TPLLTKLLAGQLVPVDAAGLAISTFQVVLVPTVIGVLANEFFPKFTAKIITVTPLIGVIL 300
TPLLTKLLAGQLVPVDAAGLA+STFQVVLVPT+IGVLANEFFPKFT+KIITVTPLIGVIL
Sbjct: 241 TPLLTKLLAGQLVPVDAAGLALSTFQVVLVPTIIGVLANEFFPKFTSKIITVTPLIGVIL 300
Query: 301 TTLLCASPIGQVAEVLKTQGAQLLLPVAVLHGAAFALGYWLSKISFGESTSRTISIECGM 360
TTLLCASPIGQVA+VLKTQGAQL+LPVA+LH AAFA+GYW+SK SFGESTSRTISIECGM
Sbjct: 301 TTLLCASPIGQVADVLKTQGAQLILPVALLHAAAFAIGYWISKFSFGESTSRTISIECGM 360
Query: 361 QSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGSALAVFWRNMPIPADDKDDFQE 417
QSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGS LAVFWRN+PIPADDKDDF+E
Sbjct: 361 QSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGSGLAVFWRNLPIPADDKDDFKE 409
BLAST of CmaCh11G005870 vs. ExPASy Swiss-Prot
Match:
Q5VRB2 (Probable sodium/metabolite cotransporter BASS2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BASS2 PE=2 SV=1)
HSP 1 Score: 567.8 bits (1462), Expect = 1.0e-160
Identity = 291/345 (84.35%), Postives = 324/345 (93.91%), Query Frame = 0
Query: 73 RKLQILCKAANDVSGDIPDGNSPSGMSLYERTIETLTTLFPLWVILGTIIGIYKPAAVTW 132
R Q+LCKA ++S ++P+ + PS + YE+ +E LTTLFP+WVILGTIIGIYKP+ VTW
Sbjct: 76 RSCQLLCKAEANISSNLPE-SIPSEANQYEKIVELLTTLFPVWVILGTIIGIYKPSMVTW 135
Query: 133 LETDLFTLGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYLIKPLLGFTISMTLKL 192
LETDLFT+GLGFLMLSMGLTLTFEDFRRC+RNPWTVGVGFLAQYLIKP+LGF I+MTLKL
Sbjct: 136 LETDLFTVGLGFLMLSMGLTLTFEDFRRCMRNPWTVGVGFLAQYLIKPMLGFAIAMTLKL 195
Query: 193 SAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQL 252
SAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQL
Sbjct: 196 SAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQL 255
Query: 253 VPVDAAGLAISTFQVVLVPTVIGVLANEFFPKFTAKIITVTPLIGVILTTLLCASPIGQV 312
VPVDAAGLAISTFQVVL+PT++GVLA+E+FPKFT +II++TPLIGV+LTTLLCASPIGQV
Sbjct: 256 VPVDAAGLAISTFQVVLLPTIVGVLAHEYFPKFTERIISITPLIGVLLTTLLCASPIGQV 315
Query: 313 AEVLKTQGAQLLLPVAVLHGAAFALGYWLSKI-SFGESTSRTISIECGMQSSALGFLLAQ 372
+EVLK QG QL++PVA+LH AAFALGYWLSK+ SFGESTSRTISIECGMQSSALGFLLAQ
Sbjct: 316 SEVLKAQGGQLIIPVALLHVAAFALGYWLSKVSSFGESTSRTISIECGMQSSALGFLLAQ 375
Query: 373 KHFTNPLVAVPSAVSVVCMALGGSALAVFWRNMPIPADDKDDFQE 417
KHFTNPLVAVPSAVSVVCMALGGSALAVFWRN +PA+DKDDF+E
Sbjct: 376 KHFTNPLVAVPSAVSVVCMALGGSALAVFWRNRGLPANDKDDFKE 419
BLAST of CmaCh11G005870 vs. ExPASy Swiss-Prot
Match:
Q93YR2 (Probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BASS1 PE=2 SV=1)
HSP 1 Score: 260.8 bits (665), Expect = 2.7e-68
Identity = 149/318 (46.86%), Postives = 193/318 (60.69%), Query Frame = 0
Query: 86 SGDIPDGNSPSGMSLYERTIETLTTLFPLWVILGTIIGIYKPAAVTWLETDLFTLGLGFL 145
S D+P S E E ++T FP+WV LG ++G+ +P+ W+ + +GL
Sbjct: 75 SNDLPTEKKKSFGEWVEFVGEAVSTAFPIWVSLGCLLGLMRPSTFNWVTPNWTIVGLTIT 134
Query: 146 MLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYLIKPLLGFTISMTLKLSAPLATGLILVSC 205
ML MG+TLT +D R L P + GFL QY + PL F +S L L A GLILV C
Sbjct: 135 MLGMGMTLTLDDLRGALSMPKELFAGFLLQYSVMPLSAFFVSKLLNLPPHYAAGLILVGC 194
Query: 206 CPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTF 265
CPGG ASN+ TYI++GNVALSVLMT ST+ A++MTPLLT LA Q + VDA GL +ST
Sbjct: 195 CPGGTASNIVTYIARGNVALSVLMTAASTVSAVIMTPLLTAKLAKQYITVDALGLLMSTL 254
Query: 266 QVVLVPTVIGVLANEFFPKFTAKIITVTPLIGVILTTLLCASPIGQVAEVLKTQGAQLLL 325
QVVL+P + G N++F K + V P I V +LC IGQ A + G Q++L
Sbjct: 255 QVVLLPVLAGAFLNQYFKKLVKFVSPVMPPIAVGTVAILCGYAIGQNASAILMSGKQVVL 314
Query: 326 PVAVLHGAAFALGYWLSKI-SFGESTSRTISIECGMQSSALGFLLAQKHFTNPLVAVPSA 385
+LH + F GY S+I ++SRTISIE GMQ+S LG +LA +HF NPL AVP A
Sbjct: 315 ASCLLHISGFLFGYLFSRILGIDVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCA 374
Query: 386 VSVVCMALGGSALAVFWR 403
VS VC ++ GS LA WR
Sbjct: 375 VSSVCHSILGSVLAGIWR 392
BLAST of CmaCh11G005870 vs. ExPASy Swiss-Prot
Match:
Q7XVB3 (Probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BASS1 PE=2 SV=2)
HSP 1 Score: 255.8 bits (652), Expect = 8.7e-67
Identity = 151/333 (45.35%), Postives = 197/333 (59.16%), Query Frame = 0
Query: 81 AANDVSGDIPDGNSPS-------GMSLYERTIETLTTLFPLWVILGTIIGIYKPAAVTWL 140
AA+ IP G S + L + E L+ FP+WV + +++P A W+
Sbjct: 68 AADPAPSKIPGGGSGALEAGVVGWRDLLLQVGEVLSLGFPVWVASACAVALWRPPAFLWV 127
Query: 141 ETDLFTLGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYLIKPLLGFTISMTLKLS 200
+G+ F ML MG+TLT +D + L P + GFL QY + PL GF IS L L
Sbjct: 128 SPMAQIVGISFTMLGMGMTLTLDDLKTALLMPKELASGFLLQYSVMPLSGFLISKLLNLP 187
Query: 201 APLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLV 260
+ A GLILVSCCPGG ASN+ TY+++GNVALSVLMT ST A +TPLLT LAGQ V
Sbjct: 188 SYYAAGLILVSCCPGGTASNIVTYLARGNVALSVLMTAASTFAAAFLTPLLTSKLAGQYV 247
Query: 261 PVDAAGLAISTFQVVLVPTVIGVLANEFFPKFTAKIITVTPLIGVILTTLLCASPIGQVA 320
VD GL +ST QVVL P ++G L N++ + + P I V +LC + I Q A
Sbjct: 248 AVDPMGLFVSTSQVVLAPVLLGALLNQYCNGLVQLVSPLMPFIAVATVAVLCGNAIAQNA 307
Query: 321 EVLKTQGAQLLLPVAVLHGAAFALGYWLSK-ISFGESTSRTISIECGMQSSALGFLLAQK 380
+ + G Q+++ V LH + F GY LS+ I S+SRTISIE GMQ+S LG +LA K
Sbjct: 308 SAILSSGLQVVMSVCWLHASGFFFGYVLSRTIGIDISSSRTISIEVGMQNSVLGVVLASK 367
Query: 381 HFTNPLVAVPSAVSVVCMALGGSALAVFWRNMP 406
HF NPL AVP AVS VC ++ GS LA WR++P
Sbjct: 368 HFGNPLTAVPCAVSSVCHSVYGSLLAGIWRSLP 400
BLAST of CmaCh11G005870 vs. ExPASy Swiss-Prot
Match:
Q6K739 (Probable sodium/metabolite cotransporter BASS3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BASS3 PE=2 SV=1)
HSP 1 Score: 211.1 bits (536), Expect = 2.4e-53
Identity = 124/315 (39.37%), Postives = 189/315 (60.00%), Query Frame = 0
Query: 93 NSPSGMSLYERTIETLTTLFPLWVILGTIIGIYKPAAVTWLETDLFTLGLGFLMLSMGLT 152
+SPS + + + + L+ L PL V + + PA +W+ + + LG +MLS+G+
Sbjct: 90 SSPSSAAAGDPS-QALSALLPLVVAATAVAALGNPATFSWVSKEYYAPALGGIMLSIGIK 149
Query: 153 LTFEDFRRCLRNPWTVGVGFLAQYLIKPLLGFTISMTLKLSAPLATGLILVSCCPGGQAS 212
L+ +DF + P + +G++AQY++KPL+G I+ + + G +L C G Q S
Sbjct: 150 LSIDDFALAFKRPVPLTIGYMAQYIVKPLMGVLIARAFGMPSAFFAGFVLTCCVSGAQLS 209
Query: 213 NVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTFQVVLVPT 272
+ A+++SKG+VALS+L+T+CSTI ++V+TP+LT LL G +VPVD +A S QVVLVP
Sbjct: 210 SYASFLSKGDVALSILLTSCSTISSVVVTPVLTGLLIGSVVPVDGIAMAKSILQVVLVPV 269
Query: 273 VIGVLANEFFPKFTAKIITVTPLIGVILTTLLCASPIG-QVAEVLKTQGAQLLLPVAVLH 332
+G+L N + I V P + ++ T+L SP+ +++L ++G LLLP+ H
Sbjct: 270 TLGLLLNTYAKAVVNVIQPVMPFVAMLCTSLCIGSPLAINRSKILSSEGFLLLLPIVTFH 329
Query: 333 GAAFALGYWLSKISF---GESTSRTISIECGMQSSALGFLLAQKHFTNPLVAVPSAVSVV 392
AAF +GYW+SK+ E RTIS+ GMQSS L LLA + F AVP+A SVV
Sbjct: 330 IAAFIVGYWISKLPMLRQEEPVCRTISVCTGMQSSTLAGLLATQ-FLGSSQAVPAACSVV 389
Query: 393 CMALGGSALAVFWRN 404
MA+ G LA +W N
Sbjct: 390 IMAIFGLTLASYWGN 402
BLAST of CmaCh11G005870 vs. TAIR 10
Match:
AT2G26900.1 (Sodium Bile acid symporter family )
HSP 1 Score: 593.6 bits (1529), Expect = 1.2e-169
Identity = 321/416 (77.16%), Postives = 358/416 (86.06%), Query Frame = 0
Query: 1 MASFSKFEYTDCRTHKFDAPYRQTYDFSAKKPTDHLYIRGKLCSSHNARSLVSQCKLLKP 60
MAS S+ TD R + ++ S + HL + S++ SL Q KP
Sbjct: 1 MASISRILPTDGRLSQ--CRINTSWVPSTTRTQTHLDFPKLVSVSNSGISLRIQNS--KP 60
Query: 61 IVFSGSPSAITSRKLQILCKAANDVSGDIPDGNSPSGMSLYERTIETLTTLFPLWVILGT 120
I + A +SR+ ++CKAA VSGD+P+ ++P +S YE+ IE LTTLFPLWVILGT
Sbjct: 61 ISPVFALEATSSRR--VVCKAAAGVSGDLPE-STPKELSQYEKIIELLTTLFPLWVILGT 120
Query: 121 IIGIYKPAAVTWLETDLFTLGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYLIKP 180
++GI+KP+ VTWLETDLFTLGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQY+IKP
Sbjct: 121 LVGIFKPSLVTWLETDLFTLGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYMIKP 180
Query: 181 LLGFTISMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVM 240
+LGF I+MTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAI+M
Sbjct: 181 ILGFLIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIIM 240
Query: 241 TPLLTKLLAGQLVPVDAAGLAISTFQVVLVPTVIGVLANEFFPKFTAKIITVTPLIGVIL 300
TPLLTKLLAGQLVPVDAAGLA+STFQVVLVPT+IGVLANEFFPKFT+KIITVTPLIGVIL
Sbjct: 241 TPLLTKLLAGQLVPVDAAGLALSTFQVVLVPTIIGVLANEFFPKFTSKIITVTPLIGVIL 300
Query: 301 TTLLCASPIGQVAEVLKTQGAQLLLPVAVLHGAAFALGYWLSKISFGESTSRTISIECGM 360
TTLLCASPIGQVA+VLKTQGAQL+LPVA+LH AAFA+GYW+SK SFGESTSRTISIECGM
Sbjct: 301 TTLLCASPIGQVADVLKTQGAQLILPVALLHAAAFAIGYWISKFSFGESTSRTISIECGM 360
Query: 361 QSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGSALAVFWRNMPIPADDKDDFQE 417
QSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGS LAVFWRN+PIPADDKDDF+E
Sbjct: 361 QSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGSGLAVFWRNLPIPADDKDDFKE 409
BLAST of CmaCh11G005870 vs. TAIR 10
Match:
AT1G78560.1 (Sodium Bile acid symporter family )
HSP 1 Score: 260.8 bits (665), Expect = 1.9e-69
Identity = 149/318 (46.86%), Postives = 193/318 (60.69%), Query Frame = 0
Query: 86 SGDIPDGNSPSGMSLYERTIETLTTLFPLWVILGTIIGIYKPAAVTWLETDLFTLGLGFL 145
S D+P S E E ++T FP+WV LG ++G+ +P+ W+ + +GL
Sbjct: 75 SNDLPTEKKKSFGEWVEFVGEAVSTAFPIWVSLGCLLGLMRPSTFNWVTPNWTIVGLTIT 134
Query: 146 MLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYLIKPLLGFTISMTLKLSAPLATGLILVSC 205
ML MG+TLT +D R L P + GFL QY + PL F +S L L A GLILV C
Sbjct: 135 MLGMGMTLTLDDLRGALSMPKELFAGFLLQYSVMPLSAFFVSKLLNLPPHYAAGLILVGC 194
Query: 206 CPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTF 265
CPGG ASN+ TYI++GNVALSVLMT ST+ A++MTPLLT LA Q + VDA GL +ST
Sbjct: 195 CPGGTASNIVTYIARGNVALSVLMTAASTVSAVIMTPLLTAKLAKQYITVDALGLLMSTL 254
Query: 266 QVVLVPTVIGVLANEFFPKFTAKIITVTPLIGVILTTLLCASPIGQVAEVLKTQGAQLLL 325
QVVL+P + G N++F K + V P I V +LC IGQ A + G Q++L
Sbjct: 255 QVVLLPVLAGAFLNQYFKKLVKFVSPVMPPIAVGTVAILCGYAIGQNASAILMSGKQVVL 314
Query: 326 PVAVLHGAAFALGYWLSKI-SFGESTSRTISIECGMQSSALGFLLAQKHFTNPLVAVPSA 385
+LH + F GY S+I ++SRTISIE GMQ+S LG +LA +HF NPL AVP A
Sbjct: 315 ASCLLHISGFLFGYLFSRILGIDVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCA 374
Query: 386 VSVVCMALGGSALAVFWR 403
VS VC ++ GS LA WR
Sbjct: 375 VSSVCHSILGSVLAGIWR 392
BLAST of CmaCh11G005870 vs. TAIR 10
Match:
AT3G25410.1 (Sodium Bile acid symporter family )
HSP 1 Score: 203.4 bits (516), Expect = 3.6e-52
Identity = 120/299 (40.13%), Postives = 176/299 (58.86%), Query Frame = 0
Query: 109 TTLFPLWVILGTIIGIYKPAAVTWLETDLFTLGLGFLMLSMGLTLTFEDFRRCLRNPWTV 168
+ L P V L + + P + TW+ DL+ LG +MLS+G+ L+ +DF + P +
Sbjct: 112 SALLPFVVALTAVAALSYPPSFTWVSKDLYAPALGGIMLSIGIQLSVDDFALAFKRPVPL 171
Query: 169 GVGFLAQYLIKPLLGFTISMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVL 228
VGF+AQY++KPLLG ++ + G IL C G Q S+ A+ +SK +VA+S+L
Sbjct: 172 SVGFVAQYVLKPLLGVLVANAFGMPRTFYAGFILTCCVAGAQLSSYASSLSKADVAMSIL 231
Query: 229 MTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTFQVVLVPTVIGVLANEFFPKFTAK 288
+T+ +TI +++ TPLL+ LL G +VPVDA ++ S QVVLVP +G++ N +
Sbjct: 232 LTSSTTIASVIFTPLLSGLLIGSVVPVDAVAMSKSILQVVLVPITLGLVLNTYAKPVVTL 291
Query: 289 IITVTPLIGVILTTLLCASPIG-QVAEVLKTQGAQLLLPVAVLHGAAFALGYWLSKI--- 348
+ V P + ++ T+L SP+ +++L +G L++P+ H AFALGYW SKI
Sbjct: 292 LQPVMPFVAMVCTSLCIGSPLSINRSQILSAEGLGLIVPIVTFHAVAFALGYWFSKIPGL 351
Query: 349 SFGESTSRTISIECGMQSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGSALAVFWRN 404
E SRTIS+ GMQSS L LLA + F AVP+A SVV MA+ G LA FW N
Sbjct: 352 RQEEEVSRTISLCTGMQSSTLAGLLASQ-FLGSSQAVPAACSVVVMAIMGLCLASFWGN 409
BLAST of CmaCh11G005870 vs. TAIR 10
Match:
AT4G22840.1 (Sodium Bile acid symporter family )
HSP 1 Score: 186.8 bits (473), Expect = 3.5e-47
Identity = 112/303 (36.96%), Postives = 174/303 (57.43%), Query Frame = 0
Query: 110 TLFPLWVILGTIIGIYKPAAVTWLETDLFTLGLGFLMLSMGLTLTFEDFRRCLRNPWTVG 169
++ P V+ TI+ + P + TW + F LGFLM ++G+ +DF + P +
Sbjct: 99 SILPHVVLASTILALIYPPSFTWFTSRYFVPALGFLMFAVGINSNEKDFLEAFKRPKAIL 158
Query: 170 VGFLAQYLIKPLLGFTISMT----LKLSAPLATGLILVSCCPGGQASNVATYISKGNVA- 229
+G++ QYL+KP+LGF + +L P+ G++LVSC G Q SN AT+++ +A
Sbjct: 159 LGYVGQYLVKPVLGFIFGLAAVSLFQLPTPIGAGIMLVSCVSGAQLSNYATFLTDPALAP 218
Query: 230 LSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTFQVVLVPTVIGVLANEFFPK 289
LS++MT+ ST A+++TP+L+ LL G+ +PVD G+ S QVV+ P G+L N+ FPK
Sbjct: 219 LSIVMTSLSTATAVLVTPMLSLLLIGKKLPVDVKGMISSILQVVIAPIAAGLLLNKLFPK 278
Query: 290 FTAKIITVTPLIGVILTTLLCASPIG-QVAEVLKTQGAQLLLPVAVLHGAAFALGYWLSK 349
+ I P++ V+ T +P+ + V+ GA +LL V + H +AF GY+L+
Sbjct: 279 VSNAIRPFLPILSVLDTACCVGAPLALNINSVMSPFGATILLLVTMFHLSAFLAGYFLTG 338
Query: 350 ISF-----GESTSRTISIECGMQSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGSALA 402
F ++ RT+S E GMQSS L LA K F +PLV +P A+S V M+L G L
Sbjct: 339 SVFRNAPDAKAMQRTLSYETGMQSSLLALALATKFFQDPLVGIPPAISTVVMSLMGFTLV 398
BLAST of CmaCh11G005870 vs. TAIR 10
Match:
AT4G12030.2 (bile acid transporter 5 )
HSP 1 Score: 185.3 bits (469), Expect = 1.0e-46
Identity = 115/311 (36.98%), Postives = 175/311 (56.27%), Query Frame = 0
Query: 104 TIETLTTLFPLWVILGTIIGIYKPAAVTWLETDLFTLGLGFLMLSMGLTLTFEDFRRCLR 163
T++ + P ++L TI+ + P + TW + F GLGF+M ++G+ DF L+
Sbjct: 94 TLKQAYSFIPHGILLSTILALVYPPSFTWFKPRYFVPGLGFMMFAVGINSNERDFLEALK 153
Query: 164 NPWTVGVGFLAQYLIKPLLGF---TISMTL-KLSAPLATGLILVSCCPGGQASNVATYIS 223
P + G++ QYLIKPLLG+ I+++L L + G++LVSC G Q SN T+++
Sbjct: 154 RPDAIFAGYIGQYLIKPLLGYIFGVIAVSLFNLPTSIGAGIMLVSCVSGAQLSNYTTFLT 213
Query: 224 KGNV-ALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTFQVVLVPTVIGVLA 283
++ ALS++MT+ ST A+++TP+L+ LL G+ +PVD G+ S QVV+ P G+L
Sbjct: 214 DPSLAALSIVMTSISTATAVLVTPMLSLLLIGKKLPVDVFGMISSILQVVITPIAAGLLL 273
Query: 284 NEFFPKFTAKIITVTPLIGVILTTLLCASPIG-QVAEVLKTQGAQLLLPVAVLHGAAFAL 343
N FP+ + I P + VI + +P+ + +L GA +L V H AF
Sbjct: 274 NRLFPRLSNAIKPFLPALTVIDMSCCIGAPLALNIDSILSPFGATILFLVITFHLLAFVA 333
Query: 344 GYWLSKISFG-----ESTSRTISIECGMQSSALGFLLAQKHFTNPLVAVPSAVSVVCMAL 403
GY+ + F ++ RTIS E GMQSS L LA K F +PLV VP A+S V M+L
Sbjct: 334 GYFFTGFFFSKAPDVKALQRTISYETGMQSSLLALALATKFFQDPLVGVPPAISTVVMSL 393
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q1EBV7 | 1.8e-168 | 77.16 | Sodium/pyruvate cotransporter BASS2, chloroplastic OS=Arabidopsis thaliana OX=37... | [more] |
Q5VRB2 | 1.0e-160 | 84.35 | Probable sodium/metabolite cotransporter BASS2, chloroplastic OS=Oryza sativa su... | [more] |
Q93YR2 | 2.7e-68 | 46.86 | Probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Arabidopsis tha... | [more] |
Q7XVB3 | 8.7e-67 | 45.35 | Probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Oryza sativa su... | [more] |
Q6K739 | 2.4e-53 | 39.37 | Probable sodium/metabolite cotransporter BASS3, chloroplastic OS=Oryza sativa su... | [more] |