CmaCh11G004090 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G004090
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	F-box protein PP2-B10-like
Location	Cma_Chr11: 2002476 .. 2004254 (+)
RNA-Seq Expression	CmaCh11G004090
Synteny	CmaCh11G004090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCTTTCCACAAAATATTGACTGTACCAGAGAAATCCAGTGGAAGAAGAAATGAGGACGGCAGCTGCCGATCTCTCTTCTCTGCCGGAAGGAGTAATCGCTTACATCTTGTCGCTGACCACTCCATTAGATGTCTGTAGGGCCTCGACGGTTTCCCGGATTTTCCATTCGGCGGCGCAGTCCGACATCGTGTGGAACAGATTCCTGCCTCCCGATTTGGACGTACTGATTTCTCGATGTAAATCCGATGACCTGGATTTTGATCCAATTTCCAGTTCGTCGAAGAACATTTTTTTCTCCCTTTGCGACAGCCCAATGCTACTTGACGATGGCGACAAGGTAAGCTTTCCGATTCCCTAACTCTCTAAATTGGCGGTGGCCGGAGTTTGATCGGTGGTCGGTCGACACAACTCTTATTCCAGCCCTAACATCATCGGAGTTCCCTTTATTTTTTATCTTATACGATCATATTATTATTCACTATAGCATCTTAGATTTTACTTTTACATGTAATTTTAGAATATAAATACATTCTAAACGATTGCTAAAAACCTCGAACCCAAGTTTTCTTTTGAATCAATCTTGGATTTCAACAAAAACTTTTACAGTTAATCTTTAAACAGAGTTCGCTTCATATGCATTTTAGTGAATGTTCGATATCCAGAATCCCCCTTTTGAAAAGACAAATAAATAAATAAATAAAATCTAATGTATGAAGTTTAAGTAACTAATTTCTTTTCATTTTGATTTAATAAAGTCTATAACCGAATGAATGGCTCTTATACTTTCAGATGTTATCAAGTTTTCTTTTTAAAATAAAGCTAATTCAATATTATTAGTATGTAAGTTGTTAGTTTCTAGGCTTTAATCTTGTTCTAAATTATCTTTTACATTGAGTTTAGTGTACGAACTAAGCTTCTGCTGACGCAAATTTCAGTCCCAGATTATTGTTTAACTGTATGAACAGACACTTAAACCAGTCTGATTCATAAAGAACGAAAAGCCACTGATTCATTTGTGTATCTTATTCCACTTGTTGAATCAACAATGAAGCTATTTTGCACTTTCTATTTGTATGCACATAAATCATTGGCATGCTGAAGAGCCTTGCATTGGAGAAATGGACTGGTAGGAAGTGCATAATGCTTGGAGCAAGGAACATCACGATCGTTTGGAGTGATACCCCTGAGTATTGGACCTGGGAACATCATCCTGATTCGAGGTTCAAAGTCTATATGAGATTATATCTTAATTTTTTTTTTCCCCTCCCAATTCTAAAACTCTGCCATTTGAACGTGGGTGTGAGAATCAGGTTTGCAGAGGTGGCTGTACTCCTCCAGGTGTGGTGGCTTGAAATCCGTGGAAGAATGAGTTGCAGAATACTGACTCGTAGAACAACTTATGGTGTTTACTTGGTGTTCAAGATGAATGAAGATGAATACCGAGGGTTCAATTTTGATCCTGCTGAAGTCAGGGCGGGAATTCTTGGCACGGAAAGCGATCCGAAAACAGTTTGTTTGGACCCTGATTTGGAGAACTCTCATCTGCGGCTTGCACCATGGTTGATGGACCATTCATTGGAAATGTCGTCAGGGTTAGAGCAGCCGAAGGAGAGACAGGATGGGTGGTTTGAAATCGAGTTGGGGGAGTTTGAAAGTGGCGATGGAGATGATGAAGTTGAGATGGATCTTATGGAGGTGAAGGGCGGCACACGCAAGACTGGGCTTGTCGTTGAGGGGATTGAGATTAGGCCTAAACCCACCTCTGTTCTTGCATAG

mRNA sequence

GTTTCTTTCCACAAAATATTGACTGTACCAGAGAAATCCAGTGGAAGAAGAAATGAGGACGGCAGCTGCCGATCTCTCTTCTCTGCCGGAAGGAGTAATCGCTTACATCTTGTCGCTGACCACTCCATTAGATGTCTGTAGGGCCTCGACGGTTTCCCGGATTTTCCATTCGGCGGCGCAGTCCGACATCGTGTGGAACAGATTCCTGCCTCCCGATTTGGACGTACTGATTTCTCGATGTAAATCCGATGACCTGGATTTTGATCCAATTTCCAGTTCGTCGAAGAACATTTTTTTCTCCCTTTGCGACAGCCCAATGCTACTTGACGATGGCGACAAGAGCCTTGCATTGGAGAAATGGACTGGTAGGAAGTGCATAATGCTTGGAGCAAGGAACATCACGATCGTTTGGAGTGATACCCCTGAGTATTGGACCTGGGAACATCATCCTGATTCGAGGTTTGCAGAGGTGGCTGTACTCCTCCAGGTGTGGTGGCTTGAAATCCGTGGAAGAATGAGTTGCAGAATACTGACTCGTAGAACAACTTATGGTGTTTACTTGGTGTTCAAGATGAATGAAGATGAATACCGAGGGTTCAATTTTGATCCTGCTGAAGTCAGGGCGGGAATTCTTGGCACGGAAAGCGATCCGAAAACAGTTTGTTTGGACCCTGATTTGGAGAACTCTCATCTGCGGCTTGCACCATGGTTGATGGACCATTCATTGGAAATGTCGTCAGGGTTAGAGCAGCCGAAGGAGAGACAGGATGGGTGGTTTGAAATCGAGTTGGGGGAGTTTGAAAGTGGCGATGGAGATGATGAAGTTGAGATGGATCTTATGGAGGTGAAGGGCGGCACACGCAAGACTGGGCTTGTCGTTGAGGGGATTGAGATTAGGCCTAAACCCACCTCTGTTCTTGCATAG

Coding sequence (CDS)

ATGAGGACGGCAGCTGCCGATCTCTCTTCTCTGCCGGAAGGAGTAATCGCTTACATCTTGTCGCTGACCACTCCATTAGATGTCTGTAGGGCCTCGACGGTTTCCCGGATTTTCCATTCGGCGGCGCAGTCCGACATCGTGTGGAACAGATTCCTGCCTCCCGATTTGGACGTACTGATTTCTCGATGTAAATCCGATGACCTGGATTTTGATCCAATTTCCAGTTCGTCGAAGAACATTTTTTTCTCCCTTTGCGACAGCCCAATGCTACTTGACGATGGCGACAAGAGCCTTGCATTGGAGAAATGGACTGGTAGGAAGTGCATAATGCTTGGAGCAAGGAACATCACGATCGTTTGGAGTGATACCCCTGAGTATTGGACCTGGGAACATCATCCTGATTCGAGGTTTGCAGAGGTGGCTGTACTCCTCCAGGTGTGGTGGCTTGAAATCCGTGGAAGAATGAGTTGCAGAATACTGACTCGTAGAACAACTTATGGTGTTTACTTGGTGTTCAAGATGAATGAAGATGAATACCGAGGGTTCAATTTTGATCCTGCTGAAGTCAGGGCGGGAATTCTTGGCACGGAAAGCGATCCGAAAACAGTTTGTTTGGACCCTGATTTGGAGAACTCTCATCTGCGGCTTGCACCATGGTTGATGGACCATTCATTGGAAATGTCGTCAGGGTTAGAGCAGCCGAAGGAGAGACAGGATGGGTGGTTTGAAATCGAGTTGGGGGAGTTTGAAAGTGGCGATGGAGATGATGAAGTTGAGATGGATCTTATGGAGGTGAAGGGCGGCACACGCAAGACTGGGCTTGTCGTTGAGGGGATTGAGATTAGGCCTAAACCCACCTCTGTTCTTGCATAG

Protein sequence

MRTAAADLSSLPEGVIAYILSLTTPLDVCRASTVSRIFHSAAQSDIVWNRFLPPDLDVLISRCKSDDLDFDPISSSSKNIFFSLCDSPMLLDDGDKSLALEKWTGRKCIMLGARNITIVWSDTPEYWTWEHHPDSRFAEVAVLLQVWWLEIRGRMSCRILTRRTTYGVYLVFKMNEDEYRGFNFDPAEVRAGILGTESDPKTVCLDPDLENSHLRLAPWLMDHSLEMSSGLEQPKERQDGWFEIELGEFESGDGDDEVEMDLMEVKGGTRKTGLVVEGIEIRPKPTSVLA

Homology

[Close]

BLAST of CmaCh11G004090 vs. ExPASy Swiss-Prot
Match: Q9ZVQ6 (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 5.5e-60
Identity = 117/286 (40.91%), Postives = 168/286 (58.74%), Query Frame = 0


Query: 1   MRTAAADLSSLPEGVIAYILSLTTPLDVCRASTVSRIFHSAAQSDIVWNRFLPPDLDVLI 60
           +++ ++   S PE  I+YI+S T P D C A+TVS+ F S  +SDI+W +FLP D + LI
Sbjct: 7   VKSESSPFDSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLI 66

Query: 61  SRCKSDDLDFDPISSSSKNIFFSLCDSPMLLDDGDKSLALEKWTGRKCIMLGARNITIVW 120
              +        + SS K ++FSLC+ P+L DD  KS+ LEK +G++C+ML A N++I+W
Sbjct: 67  PPSR--------VFSSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIW 126

Query: 121 SDTPEYWTWEHHPDSRFAEVAVLLQVWWLEIRGRMSCRILTRRTTYGVYLVFKMNEDEYR 180
            D P+YW W   P+SRF +VA L  V W EIRGR + R+L+ RT Y  Y+VFK   D+  
Sbjct: 127 GDNPQYWQWIPIPESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFK-GVDKCY 186

Query: 181 GFNFDPAEVRAGILGTESDPKTVCLDPDLENSHLRLAPWLMDHSLEMSSGLEQPKERQDG 240
           GF     E   G++G E   + +C    +      +                +PK+R+DG
Sbjct: 187 GFQNVAIEAAVGVVGQEPSRRLICFSEAIRRGRRNVV---------------KPKQREDG 246

Query: 241 WFEIELGEFESGDG---DDEVEMDLMEVKGGTRKTGLVVEGIEIRP 284
           W EIELGEF +  G   +DE+EM  +E K   RK GL+++GIEIRP
Sbjct: 247 WMEIELGEFFNDGGIMDNDEIEMSALETKQLNRKCGLIIQGIEIRP 268

[Close]

BLAST of CmaCh11G004090 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.8e-56
Identity = 109/273 (39.93%), Postives = 166/273 (60.81%), Query Frame = 0


Query: 11  LPEGVIAYILSLTTPLDVCRASTVSRIFHSAAQSDIVWNRFLPPDLDVLISRCKSDDLDF 70
           LPE  I+ I+S T+P D C A++VS+ F SA  SD VW++FLPP+ + L+SR +      
Sbjct: 64  LPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSR------ 123

Query: 71  DPISSSSKNIFFSLCDSPMLLDDGDKSLALEKWTGRKCIMLGARNITIVWSDTPEYWTWE 130
             + +S K ++F+LC +P+L++DG KS  LEK +G++CIML ++ + I W  +PEYW W 
Sbjct: 124 --VFASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWI 183

Query: 131 HHPDSRFAEVAVLLQVWWLEIRGRMSCRILTRRTTYGVYLVFKMNEDEYRGFNFDPAEVR 190
             P+SRF ++A LL V W EIRG+ S R+L+  T Y  Y+VFK  +D   G    P EV 
Sbjct: 184 SIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFK-TKDRCPGLGHLPVEVG 243

Query: 191 AGILGTESDPKTVCLDPDLENSHLRLAPWLMDHSLEMSSGLEQPKERQDGWFEIELGEFE 250
            G++G ES  + +      +    R            +  + +P +R+DGW E ELGEF 
Sbjct: 244 LGLVGQESSKRFIYFIGPRDRRGRR-----------ETRDVTKPDQREDGWMEAELGEFF 303

Query: 251 SGDGDDEVEMDLMEVKGGTRKTGLVVEGIEIRP 284
           + +  DE+E  ++E+K  + K+GL+++GIE RP
Sbjct: 304 NEERCDEIEFSVIEIKSPSWKSGLIIQGIEFRP 316

[Close]

BLAST of CmaCh11G004090 vs. ExPASy Swiss-Prot
Match: Q6NPT8 (F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.9e-53
Identity = 114/315 (36.19%), Postives = 171/315 (54.29%), Query Frame = 0


Query: 3   TAAADLSSLPEGVIAYILSLTTPLDVCRASTVSRIFHSAAQSDIVWNRFLPPDLDVLISR 62
           T A+   +LPE  I+ ++S T+P D C  ++VS+   SAAQSD+VW  FLP +   L+ +
Sbjct: 27  TRASRFDALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQ 86

Query: 63  CKSDDLDFDPISSSSKNIFFSLCDSPMLLDDGDKSLALEKWTGRKCIMLGARNITIVWSD 122
             +          S K IF SL D+ +L+++G KS  +EK +G+KC ML A  +TI+W D
Sbjct: 87  SAN--------HLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGD 146

Query: 123 TPEYWTWEHHPDSRFAEVAVLLQVWWLEIRGRMSCRILTRRTTYGVYLVFKMNEDEYRGF 182
           +P YW W   P+S+F +VA L  V W E+RG++SC +L++ T Y VY+VFK       GF
Sbjct: 147 SPAYWKWITVPESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGF 206

Query: 183 NFDPAEVRAGILGTESDPKTVCLDPDLENSHLRLA------------------PWL---- 242
           +  P E   G +G  +  K+V  +    +S    +                  PW+    
Sbjct: 207 DLVPVEAGVGFVGKVATKKSVYFESGNADSRSATSHYSGISYAMVSRAFRMRRPWMQVQR 266

Query: 243 -----MDHSLEMSSGLEQPKERQDGWFEIELGEFE------SGDGDDEVEMDLMEVKGGT 285
                ++   E    +  PKER DGW E+ELG+F         DG DE+E+ +ME + G 
Sbjct: 267 EEEEEVEGERERGMNVVGPKERVDGWSEVELGKFYINNGGCGDDGSDEIEISIMETQNGN 326

[Close]

BLAST of CmaCh11G004090 vs. ExPASy Swiss-Prot
Match: Q9FLU7 (Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.8e-53
Identity = 112/274 (40.88%), Postives = 155/274 (56.57%), Query Frame = 0


Query: 11  LPEGVIAYILSLTTPLDVCRASTVSRIFHSAAQSDIVWNRFLPPDLDVLISRCKSDDLDF 70
           LPE  IA ++S T+P D CR S VS++  SAA S+  W RFLP D  + I    S     
Sbjct: 6   LPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRMYIDNSLS----- 65

Query: 71  DPISSSSKNIFFSLCDSPMLLDDGDKSLALEKWTGRKCIMLGARNITIVWSDTPEYWTWE 130
                S+K +F   C+SP+L++DG  S  +EK +G+KC ML AR + IVW D+PE+W W 
Sbjct: 66  ---RFSNKQLFLRFCESPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDSPEFWIWV 125

Query: 131 HHPDSRFAEVAVLLQVWWLEIRGRMSCRILTRRTTYGVYLVFKMNEDEYRGFNFDPAEVR 190
             PDSRF EVA LL V W EIRG++S  +L++ T Y  YLVFK  E E   F F+   + 
Sbjct: 126 SIPDSRFEEVAGLLMVCWFEIRGKISTSLLSKATNYSAYLVFK--EQEMGSFGFESLPLE 185

Query: 191 AGILGTESDPKTVCLDPDLENSHLRLAPWLMDHSLEMSSGLEQPKERQDGWFEIELGEFE 250
                T ++                      +  + + SG ++   R+DGW EIELGE+ 
Sbjct: 186 VSFRSTRTEVYN-------------------NRRVFLKSGTQE--SREDGWLEIELGEYY 245

Query: 251 SGDGDDEVEMDLMEVKGGTRKTGLVVEGIEIRPK 285
            G  D+E+EM ++E + G  K G++V+GIEIRPK
Sbjct: 246 VGFDDEEIEMSVLETREGGWKGGIIVQGIEIRPK 248

[Close]

BLAST of CmaCh11G004090 vs. ExPASy Swiss-Prot
Match: Q9ZVQ8 (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 6.5e-53
Identity = 111/284 (39.08%), Postives = 168/284 (59.15%), Query Frame = 0


Query: 6   ADLSSLPEGVIAYILSLTTPLDVCRASTVSRIFHSAAQSDIVWNRFLPPDLDVLISRCKS 65
           A+L  LPE  ++ I+S T+P D C  ++VS+ F SA +SDIVW +F+PP+ + LIS+ ++
Sbjct: 34  AELDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSRA 93

Query: 66  DDLDFDPISSSSKNIFFSLCDSPMLLDDGDKSLALEKWTGRKCIMLGARNITIVWSDTPE 125
                     S K ++F+LCD  +L+DDG KSL +EK   ++CIM+ A N+ I W ++P+
Sbjct: 94  FKF------LSKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQ 153

Query: 126 YWTWEHHPDSRFAEVAVLLQVWWLEIRGRMSCRILTRRTTYGVYLVFKMNEDEYRGFNFD 185
            W W   P +RF  VA LL+V   EIRGR++ R+++ +T Y  Y+V+K     Y GF   
Sbjct: 154 SWRWIPDPQARFETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYKKLNICY-GFENV 213

Query: 186 PAEVRAGILG---TESDPKTVCLDPDLENSHLRLAPWLMDHSLEMSSGLEQPKERQDGWF 245
             EV  G++G    ES  + +C D  ++    R          +    L +P+ R+DGW 
Sbjct: 214 AVEVVVGVVGQDLEESCRRYICFDETMDEQFRR---------RDRGKNLVKPERRKDGWM 273

Query: 246 EIELGEFESGDG---DDEVEMDLMEVKGGTRKTGLVVEGIEIRP 284
           EI++GEF +  G   DDE+EM  +E K    K GL+++GIEIRP
Sbjct: 274 EIKIGEFFNEGGLLNDDEIEMVALEAKQRHWKRGLIIQGIEIRP 301

[Close]

BLAST of CmaCh11G004090 vs. TAIR 10
Match: AT2G02360.1 (phloem protein 2-B10 )

HSP 1 Score: 232.6 bits (592), Expect = 3.9e-61
Identity = 117/286 (40.91%), Postives = 168/286 (58.74%), Query Frame = 0


Query: 1   MRTAAADLSSLPEGVIAYILSLTTPLDVCRASTVSRIFHSAAQSDIVWNRFLPPDLDVLI 60
           +++ ++   S PE  I+YI+S T P D C A+TVS+ F S  +SDI+W +FLP D + LI
Sbjct: 7   VKSESSPFDSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLI 66

Query: 61  SRCKSDDLDFDPISSSSKNIFFSLCDSPMLLDDGDKSLALEKWTGRKCIMLGARNITIVW 120
              +        + SS K ++FSLC+ P+L DD  KS+ LEK +G++C+ML A N++I+W
Sbjct: 67  PPSR--------VFSSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIW 126

Query: 121 SDTPEYWTWEHHPDSRFAEVAVLLQVWWLEIRGRMSCRILTRRTTYGVYLVFKMNEDEYR 180
            D P+YW W   P+SRF +VA L  V W EIRGR + R+L+ RT Y  Y+VFK   D+  
Sbjct: 127 GDNPQYWQWIPIPESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFK-GVDKCY 186

Query: 181 GFNFDPAEVRAGILGTESDPKTVCLDPDLENSHLRLAPWLMDHSLEMSSGLEQPKERQDG 240
           GF     E   G++G E   + +C    +      +                +PK+R+DG
Sbjct: 187 GFQNVAIEAAVGVVGQEPSRRLICFSEAIRRGRRNVV---------------KPKQREDG 246

Query: 241 WFEIELGEFESGDG---DDEVEMDLMEVKGGTRKTGLVVEGIEIRP 284
           W EIELGEF +  G   +DE+EM  +E K   RK GL+++GIEIRP
Sbjct: 247 WMEIELGEFFNDGGIMDNDEIEMSALETKQLNRKCGLIIQGIEIRP 268

[Close]

BLAST of CmaCh11G004090 vs. TAIR 10
Match: AT2G02240.1 (F-box family protein )

HSP 1 Score: 220.3 bits (560), Expect = 2.0e-57
Identity = 109/273 (39.93%), Postives = 166/273 (60.81%), Query Frame = 0


Query: 11  LPEGVIAYILSLTTPLDVCRASTVSRIFHSAAQSDIVWNRFLPPDLDVLISRCKSDDLDF 70
           LPE  I+ I+S T+P D C A++VS+ F SA  SD VW++FLPP+ + L+SR +      
Sbjct: 64  LPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSR------ 123

Query: 71  DPISSSSKNIFFSLCDSPMLLDDGDKSLALEKWTGRKCIMLGARNITIVWSDTPEYWTWE 130
             + +S K ++F+LC +P+L++DG KS  LEK +G++CIML ++ + I W  +PEYW W 
Sbjct: 124 --VFASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWI 183

Query: 131 HHPDSRFAEVAVLLQVWWLEIRGRMSCRILTRRTTYGVYLVFKMNEDEYRGFNFDPAEVR 190
             P+SRF ++A LL V W EIRG+ S R+L+  T Y  Y+VFK  +D   G    P EV 
Sbjct: 184 SIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFK-TKDRCPGLGHLPVEVG 243

Query: 191 AGILGTESDPKTVCLDPDLENSHLRLAPWLMDHSLEMSSGLEQPKERQDGWFEIELGEFE 250
            G++G ES  + +      +    R            +  + +P +R+DGW E ELGEF 
Sbjct: 244 LGLVGQESSKRFIYFIGPRDRRGRR-----------ETRDVTKPDQREDGWMEAELGEFF 303

Query: 251 SGDGDDEVEMDLMEVKGGTRKTGLVVEGIEIRP 284
           + +  DE+E  ++E+K  + K+GL+++GIE RP
Sbjct: 304 NEERCDEIEFSVIEIKSPSWKSGLIIQGIEFRP 316

[Close]

BLAST of CmaCh11G004090 vs. TAIR 10
Match: AT2G02230.1 (phloem protein 2-B1 )

HSP 1 Score: 210.3 bits (534), Expect = 2.1e-54
Identity = 114/315 (36.19%), Postives = 171/315 (54.29%), Query Frame = 0


Query: 3   TAAADLSSLPEGVIAYILSLTTPLDVCRASTVSRIFHSAAQSDIVWNRFLPPDLDVLISR 62
           T A+   +LPE  I+ ++S T+P D C  ++VS+   SAAQSD+VW  FLP +   L+ +
Sbjct: 27  TRASRFDALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQ 86

Query: 63  CKSDDLDFDPISSSSKNIFFSLCDSPMLLDDGDKSLALEKWTGRKCIMLGARNITIVWSD 122
             +          S K IF SL D+ +L+++G KS  +EK +G+KC ML A  +TI+W D
Sbjct: 87  SAN--------HLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGD 146

Query: 123 TPEYWTWEHHPDSRFAEVAVLLQVWWLEIRGRMSCRILTRRTTYGVYLVFKMNEDEYRGF 182
           +P YW W   P+S+F +VA L  V W E+RG++SC +L++ T Y VY+VFK       GF
Sbjct: 147 SPAYWKWITVPESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGF 206

Query: 183 NFDPAEVRAGILGTESDPKTVCLDPDLENSHLRLA------------------PWL---- 242
           +  P E   G +G  +  K+V  +    +S    +                  PW+    
Sbjct: 207 DLVPVEAGVGFVGKVATKKSVYFESGNADSRSATSHYSGISYAMVSRAFRMRRPWMQVQR 266

Query: 243 -----MDHSLEMSSGLEQPKERQDGWFEIELGEFE------SGDGDDEVEMDLMEVKGGT 285
                ++   E    +  PKER DGW E+ELG+F         DG DE+E+ +ME + G 
Sbjct: 267 EEEEEVEGERERGMNVVGPKERVDGWSEVELGKFYINNGGCGDDGSDEIEISIMETQNGN 326

[Close]

BLAST of CmaCh11G004090 vs. TAIR 10
Match: AT5G24560.1 (phloem protein 2-B12 )

HSP 1 Score: 209.9 bits (533), Expect = 2.7e-54
Identity = 112/274 (40.88%), Postives = 155/274 (56.57%), Query Frame = 0


Query: 11  LPEGVIAYILSLTTPLDVCRASTVSRIFHSAAQSDIVWNRFLPPDLDVLISRCKSDDLDF 70
           LPE  IA ++S T+P D CR S VS++  SAA S+  W RFLP D  + I    S     
Sbjct: 6   LPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRMYIDNSLS----- 65

Query: 71  DPISSSSKNIFFSLCDSPMLLDDGDKSLALEKWTGRKCIMLGARNITIVWSDTPEYWTWE 130
                S+K +F   C+SP+L++DG  S  +EK +G+KC ML AR + IVW D+PE+W W 
Sbjct: 66  ---RFSNKQLFLRFCESPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDSPEFWIWV 125

Query: 131 HHPDSRFAEVAVLLQVWWLEIRGRMSCRILTRRTTYGVYLVFKMNEDEYRGFNFDPAEVR 190
             PDSRF EVA LL V W EIRG++S  +L++ T Y  YLVFK  E E   F F+   + 
Sbjct: 126 SIPDSRFEEVAGLLMVCWFEIRGKISTSLLSKATNYSAYLVFK--EQEMGSFGFESLPLE 185

Query: 191 AGILGTESDPKTVCLDPDLENSHLRLAPWLMDHSLEMSSGLEQPKERQDGWFEIELGEFE 250
                T ++                      +  + + SG ++   R+DGW EIELGE+ 
Sbjct: 186 VSFRSTRTEVYN-------------------NRRVFLKSGTQE--SREDGWLEIELGEYY 245

Query: 251 SGDGDDEVEMDLMEVKGGTRKTGLVVEGIEIRPK 285
            G  D+E+EM ++E + G  K G++V+GIEIRPK
Sbjct: 246 VGFDDEEIEMSVLETREGGWKGGIIVQGIEIRPK 248

[Close]

BLAST of CmaCh11G004090 vs. TAIR 10
Match: AT2G02340.1 (phloem protein 2-B8 )

HSP 1 Score: 209.1 bits (531), Expect = 4.6e-54
Identity = 111/284 (39.08%), Postives = 168/284 (59.15%), Query Frame = 0


Query: 6   ADLSSLPEGVIAYILSLTTPLDVCRASTVSRIFHSAAQSDIVWNRFLPPDLDVLISRCKS 65
           A+L  LPE  ++ I+S T+P D C  ++VS+ F SA +SDIVW +F+PP+ + LIS+ ++
Sbjct: 34  AELDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSRA 93

Query: 66  DDLDFDPISSSSKNIFFSLCDSPMLLDDGDKSLALEKWTGRKCIMLGARNITIVWSDTPE 125
                     S K ++F+LCD  +L+DDG KSL +EK   ++CIM+ A N+ I W ++P+
Sbjct: 94  FKF------LSKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQ 153

Query: 126 YWTWEHHPDSRFAEVAVLLQVWWLEIRGRMSCRILTRRTTYGVYLVFKMNEDEYRGFNFD 185
            W W   P +RF  VA LL+V   EIRGR++ R+++ +T Y  Y+V+K     Y GF   
Sbjct: 154 SWRWIPDPQARFETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYKKLNICY-GFENV 213

Query: 186 PAEVRAGILG---TESDPKTVCLDPDLENSHLRLAPWLMDHSLEMSSGLEQPKERQDGWF 245
             EV  G++G    ES  + +C D  ++    R          +    L +P+ R+DGW 
Sbjct: 214 AVEVVVGVVGQDLEESCRRYICFDETMDEQFRR---------RDRGKNLVKPERRKDGWM 273

Query: 246 EIELGEFESGDG---DDEVEMDLMEVKGGTRKTGLVVEGIEIRP 284
           EI++GEF +  G   DDE+EM  +E K    K GL+++GIEIRP
Sbjct: 274 EIKIGEFFNEGGLLNDDEIEMVALEAKQRHWKRGLIIQGIEIRP 301

The following BLAST results are available for this feature:

BLAST of CmaCh11G004090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVQ6	5.5e-60	40.91	F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1	[more]
Q3E6P4	2.8e-56	39.93	F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1	[more]
Q6NPT8	2.9e-53	36.19	F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1	[more]
Q9FLU7	3.8e-53	40.88	Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV...	[more]
Q9ZVQ8	6.5e-53	39.08	Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1	[more]

BLAST of CmaCh11G004090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02360.1	3.9e-61	40.91	phloem protein 2-B10	[more]
AT2G02240.1	2.0e-57	39.93	F-box family protein	[more]
AT2G02230.1	2.1e-54	36.19	phloem protein 2-B1	[more]
AT5G24560.1	2.7e-54	40.88	phloem protein 2-B12	[more]
AT2G02340.1	4.6e-54	39.08	phloem protein 2-B8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 11..51 e-value: 0.0034 score: 26.6
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 8..51 e-value: 1.7E-5 score: 24.5
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 5..51 score: 10.689717
None	No IPR available	GENE3D	1.20.1280.50		coord: 7..49 e-value: 3.7E-7 score: 31.8
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 4..285
None	No IPR available	PANTHER	PTHR32278:SF71	SUBFAMILY NOT NAMED	coord: 4..285
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 107..283 e-value: 3.3E-53 score: 179.7
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 7..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G004090.1	CmaCh11G004090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding