CmaCh11G003950 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G003950
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Syntaxin-6_N domain-containing protein
Location	Cma_Chr11: 1955841 .. 1959654 (-)
RNA-Seq Expression	CmaCh11G003950
Synteny	CmaCh11G003950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGTTGCACGGAGTTTTGATTTATGGCAGAAAGATGCTTTCTTTTCCGCCGCTGAGGAGGTGCAAGAATCGGCCGACATGTGAGTTCTGTATTGCATCGAGGGTTTGGGTATTCTGAGCATGAACAAAAGGGGTCTATCTTTCGATTGATTTTATTTAATTTTCCTTTCTGTAAATTGCTTTTGAGTGCGTGAAATTCTCCATTTTTCTTGCTTTGATATCACGTGGGTATGATAATTTGATTCCGATGTGAAGAATTTATTAATGGTCTTGGCTTTTAAACTGCGCGTTCCATCCACCATAAATTTCTTTGGTTTCCTGGCTTTTGCTCTAATAATTCTTCAAATCGTGTTCTTGTACCTGCATATTCCTTTTTGGGTCATTCTTGTTTCGATTCAATTGGTATATGGTTATGCCTTGGAATCGTTGTTTGTTATGTTATTGAGAGAGTGAAGTCAGGAAGTGGAAAGGGGAAGGAAGATGCTAAGTAGTTTTTTATTGATGTTGGAGAACTTCATGATTTGACTATGATATTTCATGAAGTTCAAAACGTTGGAGGGGGAGGATGGTTAAGCAATCGGATATGTTGCAGACTAGTTCGAGCTGTTTTCATATTGGTACCGTCGTATTTGATGTCAATAGCTGATGAAATGATGCGCAGTCTTACAAAGAGAACGCATAGTCAGGTTCTTGGCTTGGCTAGTGGATTTGTTAAGGATTATCACCATTGAAGTTTTGCTGAGAGCCTTCTTTCGTGTCTAAGGCCACAATTGGCGTGTTTTACAGTGGCGGGGCGGAGAATTTGAATAATGATGTGTGGCATGCCCTTTCTCATTGAGAGCACATAGTCGTTTATCCTAAAGTTTGAGTTTGTATGTTGTTCAGAGATTGAGATTAGGGATTCATAAGTTGTGGGACAATATTTGGGGTGATATATTCCAACGCTTCTTATGGGTTCTTAATTCAAATTTGTTTCATAACTATCTTTTACTTTTGATTCTAAGATTCTTTTATGTCATATCCGTTCTGGATGGACTTTCTTGGCCCCTTTGTTTTCTTTCATGTGTCTCATTCAAAGTTCCTTATATATGTGTGCGAATAAAAATCTCTCTCCTGCTCCTGCTCCTGCTCGAATAATAACTAATAGCAATAACTTCATCTCTATCTGTGCTTTTAGATTTTGTATTTCTTTTCATCACTTCCGCTTTGTCTCTCTTGTCGATGAGTTGAATCTACTATTGATCGTTCCTCCGGTTATCACTTTGTTAGATAAAATTATATTGTAACAATGTTATACTTGTTCTTTTCCGCAAGATCAAATCTGATTGGTTTGAATTCTCTCATGTTTCTTCTATATAAATGTCAGATTGGAATCAATATATAGGACATGGTTAAGAGAGAGAAAAGCAAGGTTAATGGTAGATGATTTGGATGCATTTACCAGGGAGTTGCGAACTGCTTTGGGAACAACCAAATGGCAGGTGATTAATATTCTGTACGTAATTGATTCATTTCTATTTCCGAAGTTGAAAGTCTCAGACATTCCTACCTCGTATGTTGACAACTATGACACAGACACAGATTTGTTTTAGGTTTATCTTCTCTTATATTCAGCACCTTGTTTCTTAAATTTTTATTCTGTATGACACCCCAATTAACTGGCGAACACTGGTTTTCTCCTTCAATTCCCTTGTCTTTGAACTCATTTGCATTGATACTTATACATGTCAACTCTGGATGCATGTTTAGTTAGAAGAGTTTGAGAAGGCTGTCCGGTTGAGCTACAGACACCATGGGGATGATACTAAGCTGGAAAGACATAGACAATTCATTGACGCCATTGAAAACCAAATATTTTGTGTTGAGGAATCATTACGTGAATATTTTGTTGAGGAAGGCAAGCAACCCCTTAAATGGGTAAACCTTAATGAGGAAGAATGTGATGATTTAGCTGCATTTCTCTCTGGGACAACTGCTACTATACGAGGTCCAAAAGATGAAATTTTGGAACCTATGCCTTCTTTTGAAGAATCTACTCATGAGACTTATAGTAAAAGACGAGAAGAAAGCAGTAATCAGAGCAGCCTAGATATTGGCGATAAAGTCGAAGAAACTCAAAATGTAATTTCACGTGCAGGGGAAGATGTTGTAAGCCATCCAGAAAGGATGGCCAATGCTAGGAGAGTGTGGAGTTCACCTAACTTTGGTTCTATGACAATTGCTATTCCTGATGAGGATGAGTGTATAAACCCAATTCCAACTGTCGAGGCCACACCTAAAGATAAAGGATCTAGAACAATCCTCTGGAGGCAAATTGGGCGGGAGTTTCTTCCAGCAAAGGTTGCTGGTCATGCATACAATCAGGTAGATTTTTCTCTCGTTTGGAGAAGTAATACTACATAGTGAACTTTTACGAGCATGAAAAGCGAACGCTACTAATGTTTGACACTGGTAATGAGGCCCATTTGTTTTATTTGAATGCGACTGCAATCGGGAGGTCGCTAATGGATATTTCATATTTTTGTTTTGCTAGCTCTTTGCTAGGTTTTTGGGCCGCAGACAATTCCAGAGTTCAAGGAATCTACAGCGTGGTTGCTCAGTTCAACTTACACTTGCTCTGATGTTAACTATTTTTTTGTTGGGTAAGTTCCTCAGAAGCTAGAGCATGCATTTTAAAAGTCAAGGAGTCTAGCCGACATAGGGAGCATGATGAAAGGATACTATTAATAACAGCATATAGACTTCTAACTTGCATAATTTCTCTGAGAAAAACCTTGCAAGAGATGTGTGGAGTTTTCTCGTTGTACTCAGAAATTCGTAATACTTGTGGTGTGATGCATTTTGATATCATGGTAGAATAATATGTCTGAGAAAATGTTTGAGGGTTGTTGTGGTATTTTTCTTACCTGCCTTGTTCTCCCACCTTGTGCAGTGCCTTTTGTACTTTATTCAACTTGACGGTCCTGTAGGAGACATCTACAATATTTCAGGTACCTCCTCCTGTTTAAATGCCTCATTACTTGAATTGCAAATGGAAATAAAAGCTTTGAGTCGGTACGTTATGCACATCTTAGGAAGTTTAATGAGGCCGTCAATTATTGGGATGACGAATTTACAAAGTGAATGCCTATTTCTGTTTAAATGTCTCATTGTTCTTTTCTGTCTTTTTTCTCCTTTCTTCCTCCTCCTGGCCGTCACGGCCTACTGCTATCACCATTGCCGCTCACCTTCTTTCTCCTCTCTTCGTTTGCCTTATGCACATCTTTTTCTTTGGAAGTGAATGCGTATGATGTTAGTATCTGATATTGGTTGATAGTATACTTTTTAAATCTATGAGGTGTGTGTATACCATACCATACCATACCATACCATTTGGTTGGGGCAGTTCTGAATTTGGTTTTCCTTTTGTATGCAGCGGTCACTACAGATTTAGATCTCAACGCTCTGGAGAAATGAAGGTGTTTTCAGAGGATTGAAGATGAAGAAGAAGAAGAAGGCCTATTGTATTTCTGTTGCTATGAACAAAGTGAAAAGGCAACAAGAATTAGGATATAATTAATAGAGATATTGTACGATTTACTACAGTGTGTCTAAAACCACAAGCTGCAAAAGAATCTCGTATAGAACTGTGCTTGTCTGTCTATTATGTCTTCAGGGATTCTACTGGGAAACCAAAGATTGATGCTTTCCTGTCAAAATTCTCTCTTTAAATACAACTTCCTTAGGTGGAAGGAGAAGGTTTTTTCTCTATTCATATAAATACCATCAAGTTCAATCAATTTCTCGTTGCATTATTTTTCAAATCAACCAT

mRNA sequence

ATGTTGGTTGCACGGAGTTTTGATTTATGGCAGAAAGATGCTTTCTTTTCCGCCGCTGAGGAGGTGCAAGAATCGGCCGACATATTGGAATCAATATATAGGACATGGTTAAGAGAGAGAAAAGCAAGGTTAATGGTAGATGATTTGGATGCATTTACCAGGGAGTTGCGAACTGCTTTGGGAACAACCAAATGGCAGTTAGAAGAGTTTGAGAAGGCTGTCCGGTTGAGCTACAGACACCATGGGGATGATACTAAGCTGGAAAGACATAGACAATTCATTGACGCCATTGAAAACCAAATATTTTGTGTTGAGGAATCATTACGTGAATATTTTGTTGAGGAAGGCAAGCAACCCCTTAAATGGGTAAACCTTAATGAGGAAGAATGTGATGATTTAGCTGCATTTCTCTCTGGGACAACTGCTACTATACGAGGTCCAAAAGATGAAATTTTGGAACCTATGCCTTCTTTTGAAGAATCTACTCATGAGACTTATAGTAAAAGACGAGAAGAAAGCAGTAATCAGAGCAGCCTAGATATTGGCGATAAAGTCGAAGAAACTCAAAATGTAATTTCACGTGCAGGGGAAGATGTTGTAAGCCATCCAGAAAGGATGGCCAATGCTAGGAGAGTGTGGAGTTCACCTAACTTTGGTTCTATGACAATTGCTATTCCTGATGAGGATGAGTGTATAAACCCAATTCCAACTGTCGAGGCCACACCTAAAGATAAAGGATCTAGAACAATCCTCTGGAGGCAAATTGGGCGGGAGTTTCTTCCAGCAAAGGTTGCTGGTCATGCATACAATCAGCTCTTTGCTAGGTTTTTGGGCCGCAGACAATTCCAGAGTTCAAGGAATCTACAGCGTGGTTGCTCAGTTCAACTTACACTTGCTCTGATGTTAACTATTTTTTTGTTGGCGGTCACTACAGATTTAGATCTCAACGCTCTGGAGAAATGAAGGTGTTTTCAGAGGATTGAAGATGAAGAAGAAGAAGAAGGCCTATTGTATTTCTGTTGCTATGAACAAAGTGAAAAGGCAACAAGAATTAGGATATAATTAATAGAGATATTGTACGATTTACTACAGTGTGTCTAAAACCACAAGCTGCAAAAGAATCTCGTATAGAACTGTGCTTGTCTGTCTATTATGTCTTCAGGGATTCTACTGGGAAACCAAAGATTGATGCTTTCCTGTCAAAATTCTCTCTTTAAATACAACTTCCTTAGGTGGAAGGAGAAGGTTTTTTCTCTATTCATATAAATACCATCAAGTTCAATCAATTTCTCGTTGCATTATTTTTCAAATCAACCAT

Coding sequence (CDS)

ATGTTGGTTGCACGGAGTTTTGATTTATGGCAGAAAGATGCTTTCTTTTCCGCCGCTGAGGAGGTGCAAGAATCGGCCGACATATTGGAATCAATATATAGGACATGGTTAAGAGAGAGAAAAGCAAGGTTAATGGTAGATGATTTGGATGCATTTACCAGGGAGTTGCGAACTGCTTTGGGAACAACCAAATGGCAGTTAGAAGAGTTTGAGAAGGCTGTCCGGTTGAGCTACAGACACCATGGGGATGATACTAAGCTGGAAAGACATAGACAATTCATTGACGCCATTGAAAACCAAATATTTTGTGTTGAGGAATCATTACGTGAATATTTTGTTGAGGAAGGCAAGCAACCCCTTAAATGGGTAAACCTTAATGAGGAAGAATGTGATGATTTAGCTGCATTTCTCTCTGGGACAACTGCTACTATACGAGGTCCAAAAGATGAAATTTTGGAACCTATGCCTTCTTTTGAAGAATCTACTCATGAGACTTATAGTAAAAGACGAGAAGAAAGCAGTAATCAGAGCAGCCTAGATATTGGCGATAAAGTCGAAGAAACTCAAAATGTAATTTCACGTGCAGGGGAAGATGTTGTAAGCCATCCAGAAAGGATGGCCAATGCTAGGAGAGTGTGGAGTTCACCTAACTTTGGTTCTATGACAATTGCTATTCCTGATGAGGATGAGTGTATAAACCCAATTCCAACTGTCGAGGCCACACCTAAAGATAAAGGATCTAGAACAATCCTCTGGAGGCAAATTGGGCGGGAGTTTCTTCCAGCAAAGGTTGCTGGTCATGCATACAATCAGCTCTTTGCTAGGTTTTTGGGCCGCAGACAATTCCAGAGTTCAAGGAATCTACAGCGTGGTTGCTCAGTTCAACTTACACTTGCTCTGATGTTAACTATTTTTTTGTTGGCGGTCACTACAGATTTAGATCTCAACGCTCTGGAGAAATGA

Protein sequence

MLVARSFDLWQKDAFFSAAEEVQESADILESIYRTWLRERKARLMVDDLDAFTRELRTALGTTKWQLEEFEKAVRLSYRHHGDDTKLERHRQFIDAIENQIFCVEESLREYFVEEGKQPLKWVNLNEEECDDLAAFLSGTTATIRGPKDEILEPMPSFEESTHETYSKRREESSNQSSLDIGDKVEETQNVISRAGEDVVSHPERMANARRVWSSPNFGSMTIAIPDEDECINPIPTVEATPKDKGSRTILWRQIGREFLPAKVAGHAYNQLFARFLGRRQFQSSRNLQRGCSVQLTLALMLTIFLLAVTTDLDLNALEK

Homology

[Close]

BLAST of CmaCh11G003950 vs. ExPASy Swiss-Prot
Match: Q946Y7 (Syntaxin-61 OS=Arabidopsis thaliana OX=3702 GN=SYP61 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 8.0e-04
Identity = 31/109 (28.44%), Postives = 55/109 (50.46%), Query Frame = 0


Query: 12  KDAFFSAAEEVQESADILESIYRTWLRERKARLMVDDLDAFTRELRTALGTTKWQLEEFE 71
           +D F+   EE+Q+S D L+S +  W  ER +  M D      +EL    G+ +WQ++E E
Sbjct: 5   QDPFYIVKEEIQDSIDKLQSTFHKW--ERISPDMGDQAHV-AKELVATCGSIEWQVDELE 64

Query: 72  KAVRLSYRHHG----DDTKLERHRQFIDAIENQIFCVEESLREYFVEEG 117
           KA+ ++ +       D+ +LE+ R++      Q+  V+  +    V  G
Sbjct: 65  KAITVAAKDPSWYGIDEAELEKRRRWTSNARTQVRNVKSGVLAGKVSSG 110

[Close]

BLAST of CmaCh11G003950 vs. TAIR 10
Match: AT2G18860.1 (Syntaxin/t-SNARE family protein )

HSP 1 Score: 213.8 bits (543), Expect = 2.1e-55
Identity = 135/312 (43.27%), Postives = 186/312 (59.62%), Query Frame = 0


Query: 1   MLVARSFDLWQKDAFFSAAEEVQESADILESIYRTWLRERKARLMVDDLDAFTRELRTAL 60
           M+V  SFDLWQKD FFSAAEEVQ+S DI+ES YR W+RE+K        D   +EL+ AL
Sbjct: 1   MMVVNSFDLWQKDVFFSAAEEVQKSTDIMESAYRLWIREKK--------DEICKELQAAL 60

Query: 61  GTTKWQLEEFEKAVRLSYRHHGD-DTKLERHRQFIDAIENQIFCVEESLREYFVEEGKQP 120
           GT KWQLEEFEKAVRLS++  GD D+   RH+QF+ AIENQI  VE SL+E + E GK+P
Sbjct: 61  GTAKWQLEEFEKAVRLSHKRCGDNDSSSTRHKQFVTAIENQIHRVETSLQEAYSENGKKP 120

Query: 121 LKWVNLNEEECDDLAAFLSGTTATIRGPKDE-ILEPMPSFEESTHETYSKRREESSNQSS 180
           L+WV+LNEEE DDLA FLSG++ T +    E  ++   S   S  E   +   + + + +
Sbjct: 121 LRWVDLNEEERDDLAMFLSGSSRTSQSFSGESSIKSRESTNSSLVENVMEVSAKVTFKKA 180

Query: 181 LDIGDKVEETQNVISRAGEDVVSHPERMANARRVWSSPNFGSMTIAIP---DEDECINPI 240
              GD  E   ++  R         E+    RR+WSSPNF S+ I +P   +E+E    +
Sbjct: 181 KVYGDGSECVIDIEERV---TPGQAEKSVGLRRIWSSPNFNSLRIIVPGGDNEEEKETLV 240

Query: 241 PTVEATPKDKGSRTILWRQIGREFLPAKVAGHAYNQLFARFLGRRQFQSSRNLQRGCSVQ 300
             +EATPK KG++++LW Q        ++  H  NQLF +      FQ+   L     ++
Sbjct: 241 AQIEATPKVKGTKSVLWMQ--------RLPDH--NQLFDK---TGCFQNPIRLPFNHPIK 288

Query: 301 LTLALMLTIFLL 308
             ++L+L +FLL
Sbjct: 301 FIVSLLLMVFLL 288

[Close]

BLAST of CmaCh11G003950 vs. TAIR 10
Match: AT4G30240.1 (Syntaxin/t-SNARE family protein )

HSP 1 Score: 205.3 bits (521), Expect = 7.3e-53
Identity = 131/314 (41.72%), Postives = 179/314 (57.01%), Query Frame = 0


Query: 1   MLVARSFDLWQKDAFFSAAEEVQESADILESIYRTWLRERKARLMVDDLDAFTRELRTAL 60
           M+VA SFDLWQKD FFSAAEEVQESADI+ES YR W +E++   +  + D   +EL+ AL
Sbjct: 1   MMVANSFDLWQKDVFFSAAEEVQESADIMESAYRLWFKEKRDGRVSVESDELCKELQAAL 60

Query: 61  GTTKWQLEEFEKAVRLSYRHHGDDTKLERHRQFIDAIENQIFCVEESLREYFVEEGKQPL 120
            T KWQLEEFE+AV LS+ +  DDT L RH+QF+ AIENQI+ VE +L E   E GKQPL
Sbjct: 61  STAKWQLEEFERAVSLSHGNCRDDTTLTRHKQFVTAIENQIYQVESTLLESLSENGKQPL 120

Query: 121 KWVNLNEEECDDLAAFLSGTTATIRGPKDEILEPMPSFEESTHETYSKRREESSNQSSLD 180
           +WV+LN+EE DDLA FLSG++ T      + +    S   S  E           +   D
Sbjct: 121 RWVDLNKEERDDLAMFLSGSSQTSESLNSDSINLRDSSTSSVAENPRGINGRREGRCYGD 180

Query: 181 IGDKVEETQNVISRAGEDVVSHPERMANARRVWSS---PNFGSMTIAIP---DEDECINP 240
             D V +  ++ S    D      +    RR WSS   PN  ++ I +P    E+E    
Sbjct: 181 SPDCVIDIDDIGSPESAD------KKGGTRRTWSSPNVPNISALRINVPVNAKEEEREKF 240

Query: 241 IPTVEATPKDKGSRTILWRQIGREFLPAKVAGHAYNQLFARF-LGRRQFQSSRNLQRGCS 300
           +  +E TPK+KG++ + W Q  R+          YNQLF R  + +R+F+   +      
Sbjct: 241 LSHIEDTPKEKGAKPMFWLQRCRD----------YNQLFDRVKVYQRRFRVPLSRPIKLI 298

Query: 301 VQLTLALMLTIFLL 308
           + LTL L+L +F+L
Sbjct: 301 LSLTLILILLLFIL 298

[Close]

BLAST of CmaCh11G003950 vs. TAIR 10
Match: AT2G18860.2 (Syntaxin/t-SNARE family protein )

HSP 1 Score: 169.5 bits (428), Expect = 4.5e-42
Identity = 113/284 (39.79%), Postives = 162/284 (57.04%), Query Frame = 0


Query: 29  LESIYRTWLRERKARLMVDDLDAFTRELRTALGTTKWQLEEFEKAVRLSYRHHGD-DTKL 88
           +ES YR W+RE+K        D   +EL+ ALGT KWQLEEFEKAVRLS++  GD D+  
Sbjct: 10  MESAYRLWIREKK--------DEICKELQAALGTAKWQLEEFEKAVRLSHKRCGDNDSSS 69

Query: 89  ERHRQFIDAIENQIFCVEESLREYFVEEGKQPLKWVNLNEEECDDLAAFLSGTTATIRGP 148
            RH+QF+ AIENQI  VE SL+E + E GK+PL+WV+LNEEE DDLA FLSG++ T +  
Sbjct: 70  TRHKQFVTAIENQIHRVETSLQEAYSENGKKPLRWVDLNEEERDDLAMFLSGSSRTSQSF 129

Query: 149 KDE-ILEPMPSFEESTHETYSKRREESSNQSSLDIGDKVEETQNVISRAGEDVVSHPERM 208
             E  ++   S   S  E   +   + + + +   GD  E   ++  R         E+ 
Sbjct: 130 SGESSIKSRESTNSSLVENVMEVSAKVTFKKAKVYGDGSECVIDIEERV---TPGQAEKS 189

Query: 209 ANARRVWSSPNFGSMTIAIP---DEDECINPIPTVEATPKDKGSRTILWRQIGREFLPAK 268
              RR+WSSPNF S+ I +P   +E+E    +  +EATPK KG++++LW Q        +
Sbjct: 190 VGLRRIWSSPNFNSLRIIVPGGDNEEEKETLVAQIEATPKVKGTKSVLWMQ--------R 249

Query: 269 VAGHAYNQLFARFLGRRQFQSSRNLQRGCSVQLTLALMLTIFLL 308
           +  H  NQLF +      FQ+   L     ++  ++L+L +FLL
Sbjct: 250 LPDH--NQLFDK---TGCFQNPIRLPFNHPIKFIVSLLLMVFLL 269

[Close]

BLAST of CmaCh11G003950 vs. TAIR 10
Match: AT1G27700.1 (Syntaxin/t-SNARE family protein )

HSP 1 Score: 132.9 bits (333), Expect = 4.6e-31
Identity = 66/140 (47.14%), Postives = 94/140 (67.14%), Query Frame = 0


Query: 6   SFDLWQKDAFFSAAEEVQESADILESIYRTWLRERKARLMVDDLDAFTRELRTALGTTKW 65
           S D W+KD FF AAEEVQESAD +ES YRTWL  ++    V D +   R+L  ALGTTKW
Sbjct: 4   SLDRWEKDPFFPAAEEVQESADRMESAYRTWLNGKRDSSKVWDSEQLHRDLHAALGTTKW 63

Query: 66  QLEEFEKAVRLSYRHHGDDTKLERHRQFIDAIENQIFCVEESLREYFVEEGKQPLKWVNL 125
           QL+EF+KAV+ SY +   D   +RHR+F   +E Q+  +E+SL+E    +GK   +WV L
Sbjct: 64  QLDEFQKAVKSSYDNRLSDETRDRHREFTFVMEAQVSKIEKSLKEAAQSDGKGTPRWVRL 123

Query: 126 NEEECDDLAAFLSGTTATIR 146
           +E++ ++LA FL+G + + +
Sbjct: 124 DEDDRNELALFLTGPSESAK 143

[Close]

BLAST of CmaCh11G003950 vs. TAIR 10
Match: AT1G28490.1 (syntaxin of plants 61 )

HSP 1 Score: 46.2 bits (108), Expect = 5.7e-05
Identity = 31/109 (28.44%), Postives = 55/109 (50.46%), Query Frame = 0


Query: 12  KDAFFSAAEEVQESADILESIYRTWLRERKARLMVDDLDAFTRELRTALGTTKWQLEEFE 71
           +D F+   EE+Q+S D L+S +  W  ER +  M D      +EL    G+ +WQ++E E
Sbjct: 5   QDPFYIVKEEIQDSIDKLQSTFHKW--ERISPDMGDQAHV-AKELVATCGSIEWQVDELE 64

Query: 72  KAVRLSYRHHG----DDTKLERHRQFIDAIENQIFCVEESLREYFVEEG 117
           KA+ ++ +       D+ +LE+ R++      Q+  V+  +    V  G
Sbjct: 65  KAITVAAKDPSWYGIDEAELEKRRRWTSNARTQVRNVKSGVLAGKVSSG 110

The following BLAST results are available for this feature:

BLAST of CmaCh11G003950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q946Y7	8.0e-04	28.44	Syntaxin-61 OS=Arabidopsis thaliana OX=3702 GN=SYP61 PE=1 SV=1	[more]

BLAST of CmaCh11G003950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18860.1	2.1e-55	43.27	Syntaxin/t-SNARE family protein	[more]
AT4G30240.1	7.3e-53	41.72	Syntaxin/t-SNARE family protein	[more]
AT2G18860.2	4.5e-42	39.79	Syntaxin/t-SNARE family protein	[more]
AT1G27700.1	4.6e-31	47.14	Syntaxin/t-SNARE family protein	[more]
AT1G28490.1	5.7e-05	28.44	syntaxin of plants 61	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.58.90		coord: 10..111 e-value: 3.6E-16 score: 61.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..177
None	No IPR available	PANTHER	PTHR34949:SF3	SYNTAXIN/T-SNARE FAMILY PROTEIN	coord: 1..308
None	No IPR available	PANTHER	PTHR34949	OS05G0443700 PROTEIN	coord: 1..308
IPR015260	Syntaxin 6, N-terminal	PFAM	PF09177	Syntaxin-6_N	coord: 13..101 e-value: 2.9E-19 score: 69.5
IPR010989	SNARE	SUPERFAMILY	47661	t-snare proteins	coord: 12..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G003950.1	CmaCh11G003950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0015031	protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane