CmaCh11G003750 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G003750
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	U3 small nucleolar RNA-associated protein 25
Location	Cma_Chr11: 1862736 .. 1877995 (+)
RNA-Seq Expression	CmaCh11G003750
Synteny	CmaCh11G003750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCTCCGAGTCTCACGTTTCCCCGCCACTTATTATTCTCCTTAAACGCGGTCTCTTTCTCTGCAACAACTCAGTGTTACCACCGTCGTCTTACTTCCGCTCGTGCCGCCGATTTTGCACTGATTGTTTACTCTCTGTCGTTACTGGTATACTTCCGATCTCCATCCATGTCTTTATTCTTACTTGAAAAACACAAATTAGGAGCTTCTAATGGAAGAACGAAGGTGTTGTTTTATTAATTATTATTATTTTAACTAAAGACAGTAGAATAGCTACTAATAAAGCCTTGTGGAAAACTAGGGATCAATTATTCAGCAGGCAATACCATTGGATCCTGACGTGAGCATAGAAGCTGGGCATACTTTCAGAATTTTCCACTGAAAATATTCATCAATGGTGAAGCAGTTAGTTCGTAAACGAGGTGAGGATTCTTGATTTTTCCTTTTCTTTCTTTCGTTCTTTTGTTGGGAATATGGCTTGATTGCTTAGCTAGTTCATGAAGATACAGTTCTGAGATGATTATTTTATATATTGCTTCTTATTGACAATGATGTATTTGTGTTTATATTTCCTTTAGTGCGCACTTACTTTTCATATGCGAGGGCAATTATGGTGAATTTTTGTGTAGGAGCCAGTGAGGCCGAGGAACTTGAAGTTTTCAAAGAGCAATCGAACTACGATAATTTGTTAATGCAATTACAATCATGTAATAAGGATGTTGCTGCTTCATGTATGAAAAGGTAGTATTCATTAACTGGATTTTGATACTGAATTATTATTATTAAAAAATTAAATGCTATTTGATATGGTTTATTCTAATTTTAAAGAATATTTACTATCTCTAGATTGTCGAATTGTGTTTGATACCTTCGTTCATTAATTTCCCGCAAATATGAATTAAATATGGTTTTACTATTTGTTGGGGTTACACTTCATGCATAAGCGTGATTTATTATTGTACTGTCCATGTTTCTATCACGATGCTTGCCATTTAGAGAAAGCCTCATGTGAGAGTTGGGCCAATACCTAATCTTGCACGAAAAACTAGAAGCTAGGCCGTAAAATGAGGAAACATCAAATTTGATTCAGACGATCTTGGATTAGCGGTAGTTAATTTTGTGACCTGATTCTTATTAATTTGAGTCATTAATTGTGTACTGGTGGATATATTATGCATATAAATTTTCATGAGAGCAACATGTTTGCTCTATACACAAGTTGTTGGACGACACAATATTTCTTTTTATACTACTTAGCTCGTGGAATTATTATTTCTTTCTGCAAGTTGCTAAGGCACCCAAGTTATATTTGCCTTAAATTTGAACTTTCTCTTTTTTTTCTTGTCTTGTCCATGTTTTTCCCTAGACAAAGACAAGAAGAAGGCAGAAGTGACACAGAGGATGACGAGGATAGCTGTCCTGAATCTTCTAGTGCATTAGAGGAGGAGGAAGAAGAGGAAGGTAAGAGTTTTATGGGTTTCTCATGGCATTGTTATTTATGTTTCAGTATCTTTTTGACCGTTGATTTTTAATATTTTGGCTAGTTGTAGAACTTCTAGTCATCCAAGTAGTCCTTTGTTTCTCAAGACACTAACAACGTGTTTCAAAATTGTTTTAAAAATTTTCTTCTTACCGTCAACAGATGTATATGTTCTCATGGCTAAGACTATTAGACTATCTTTACCAGTAATGCTGTTTTATGGCATTGATGGTTTTAATTAATTTATTTATTGAACCTGATGGTTAATGTTAATATCAGGAAATGACTTTTTTCTCTGTTTCTTGTATCCCAAATAAAGAAGTCTGACAATGGGGAAAATCGAGGCTGGTCTTGACCTTGACCTTTTCATTGACCTGGCCTTCTGTTTTGTTCTTTGCTTGGAGCCTCTTTAGTATGTTAAACTATGAAGAATAGTGCCCATTATCCTAAATGGCAGAATGTGGAAACTCTTTTCATGTTTCCACCATTTCTTTTTCGGGCCTTTTTTGTAAAGTAGAGGTTTTTTCCTGTTGATGGGGATAGACCTTAAAATTGATTGTGAAGACCAACAATTTTGTTATGAGAAGTTTGAGCATTATGCTTCTAATCTTTTGCTAAGAATGTCATTTAAAATCTCATTGAAGGAGTTGGATCCCCAGTCAGGCTTAAGACTATTCAAAATTTTAAACATAACCCGAGTAAAATCCAGGAGTTTCTTCTAGGTTTCTTTTGGTGGCTCCCGTGTGTGCTTGAACCTATGCTTTGGTACAGCCAAGTTTTGTAATATTTCACTCATTATAGAAGACAGTACCTTACACAAATTACAGAAATTTAATGATGAAGAAAGTTTCTTTTATTAGTTTTCACTAGTCCTTTTTGTTTAAGATTTGAGCATCGTTTTTATCATCTTTTCTATATGAAACTTATATATCCTAACGTTATATTTTATATTATTGTTTGGATTCATCCCGTTGCAAAATTTTGCTTTTATTTCATTATACAAATTCTCCATATTGTAGGGACTGATGATGAGTCACCTAAAAGTTCATCTTTGGGGAACAATATGTCTGAGCCAATGCCAAACAACGAAACTGAAGAGGACACTGAATCTGATAGGTCTGACACAGATCAGGAAAATGAACTTGAAGTTGGTTCGCATGGTGACCCTTCTACATCAGATATAACTAGGTTAGTCCATAATTTTATGGTGAATCATATAAATCATGTCCTTTGTTTTTGAGATCTAATCTCATATTATATATTTCTCTTCACCCCTTCTTAAATTGGACCATGAAGTCAATGACATAAAAATTATAGTTGCTTGTTTAGATATTAAACTATATAGTACTGATTTCTTCAATTCTAAATTTAGGGCGTTCGTTGATTGGGATGGGTGGAGTTCTAGACAATTCCAAATGTTTGAATTGGAAATTTTCCTAAGCTCAAAAGCTCTCGTTAGATTATGGGTTCTATTTAGGTCGAGTTGGTTTAGTCATTTATTTTTGAAAAAGATAGTAAACCACCAATACTTTATGAGCATATTTGCATATTCTTATGTATAAATTTTAATTTGCAAACTCTCTATTTTCAGAGTTCTTTCAAATGTTCGTAAAATTTTGTGAAAAGGGAAGCAGAAGTGGCAACCAGTGAAATGAAATATGATCTCAAATACTTCACAACTTATAGAGTGAAAAAAAAAATTTAGTTAGTGATTTCAAGTTGTTTTGGTTCTACTCAAATCAATTTTATTGGACTTATTCTCCCAACTCAACTCATTGGTGTTGGGTTGGATTGTTAAGTTTTAGCGACTTGATGAGTTCAATTTTCTTTAGGTGTTTTCGATAGAAGAGGTTTGTAACTAAAAGGATGTTGGTTGGAAGAGTGTGGTTGTGGCCTTTTAATCTCTTATTGTTATTATCATTATAACTGTTTCTTTTAAAAATAAAATTAAGGAATGAAGCTTTTACTTGGCCATAGAGATCATAGTCATATGATTTATTGCTTATACTTCTATTTATGCAGTTCATTTAACAAACACATGGAGCACAAGTTATCAAAAGAAGAGGTTGAGAATTTCCCTAAAATGAAATGGAAATATACATGGGCGGTTCCTGCAGTAGGGATGTCTAACTGCAAGTGGTCAGGGACCGGAGAGTGCTTTCTAAAGGTATTTTAATTTTTACATCTATAGAGTTTCTGAAATCTGATTTATTTTTGTGAGTTCATTCTTCCATCCTTATCAAAAATTTTAATTCTCAAGTTCTTCTTTTGATTGTTGATGCTAAATATTTTTAATGATTATATTTCAGGATTTAGAAACCAAATCTAGTAATTACAATCTTAAGCAAAGGTTATATGAGCACTGGTTGGATGTGTACAAGACATCTGGAGGCACTGACTTTCATTCGTCGAGACAAAGATTTTTCTTTTCCCTTTGTGAGTTTTCTTTTTCTTTTTTTTGGGTATATGTGTATATTGTATACAATTGCTTTTGAATATATAGCCGCACTTGCCGCACACCTTTACAAGCTTTCATATTCTCCCCTATCAGAAGATTCCTTTTACGGGATAAGAATTGAATATTTCATTCGCATATTCTTGTTCAATTTTTTTTTTTTTTCATGAACATATTTGTAAATATGATTTAGATGAGGACTCAAAGTTGGATGAAACAGAAAACATGGGTAAGATGCAGGCGTAAGCATTAATCTTAAATATTTTTTTGGATAAAAAACCAATCTGTCATTGAAAAAAAATGAAAGCATACACAGGAATGTTAAACAAAAGTTCATAGCCAGGAGTTTGAGAACCTTGCAAAATCTACGGCATTCCTTAATATTCTCTATTTCTTTCATAGAGATTGACTTGATCACGAGACTGAGAATTAGCTTTTTTGTTGTCTTTCCAATCTGTAATTCTTTCCCTAGATTGTAGAGATCTACGTTTATAGTCCCTTGATATTACCAACTCATCCAAGGACCAATTTTGAATGTTGTGTAACTAGTTGGATCTTTGCAAAATTGTCCCAAAATGTTTTCCTTTTCCAACGTACAAGCCTTCCTCTCTCTAATTCAATCTTTTCAAACAAGTACTGGACAGAGAAAAGAAAACTGCTTTATGAAATTTTAATACCCAAAGTTTCAATCTTGGCATCAGTTGTTGTCATGTCTTTAGTTCAGCCGACTTGTGATGATTTCTAGCTGCTAATAAGTAAGTTGCTTAGTTATATTAACTTAAGCTACTAGTTTAAAAGGTTAGGCTGTTTTAGCTTTGATAATTTGCACTGTTTTTCTTATTAGACACAAATTTCATAGATAATGTGAAATTACATACGGCAGATAGCTGAACAAAAGCAAAGGAATTACAAAAAAGCTCTACGACAATTATTTATAGAATTAGATTGTGTACAAAAGGTTTTAGAGAGGGAAGCCCAAGAAGATGTGCAAAATCACTTAACTACAAACCACTTCCTTAGGAGCCTTCATGCTATTGGAAATTCTTTTGTTTCTTACTAACCCCATTTCCCAAAAAATAGCCATGATCTTGTTGACCTTATTCAAAGGATCTTTAACTTCTCCTTTAGCCACAACCTCAAAAACAATAGAAAAAAATCCCTGAAATTTTTTGCCTCACGAAGTAGGAATTGAAAAGACCAAAATTTTTTCAACTGCCACTTTCAAAACTTACATTTCAAGAAAAAAGGTGGCCTTACTGCCCTGGGTCCCGTGTTTGAATCCCCAAGCCATCATACTAGTGTGTAAAACTTTGGATTGCATATGTTTCCATTCCAAGGCAAGTTGGCAAGCTGTTTTACAGGTTCTATGAGAACTGACATTTTGTGATTGTTGTTGGCTGTCAAAGACTCTCTTAATAAGAAATTTATTCTGCTAGCTAAGATTATTGGTGTGGAGGTATTGATTTTGTTGGGTTGCTAAAAGCAGTAGATTTGGGTCATTTGGCTGTCAAGAGTGGTGAAATATATGTGTTTGTGGATTATTTATTCTCATAATTGTTTGTTTGTGTATGCGCGTGCATATGCATTTTTGTTGCTTATCCTTCTAGTTTTCTTTCAGGCAACAGCTACCGGGATATACTGAACTGCAACAAGAAACCGTTTTATTTGAAAGGTCTTGAAGAAGACTCAAGTATCATGGATTCATATATTATGCATACTGTACGTGCATTCCTCTATTACTCCTTATGGAAAATCATTTAGAATATATATTTGTTCGTGTGAATGAATCACGAAAAAAAATGTTTTGCAGTTGAATCATGTTTTCAAAAGTGGAGACCTCATAACGAAGAACAATTCAAAAATGGCCAAGCATCAAGACTGTGCCGAGATTCTTAGTGGAGAGAAATTTCTTGATCATGGATTTACTCGTCCAAAGGTTGTAACTGTGGTCCTTCATTTTCTTTTTATATGCTATACTGAAAAGGTTTTGAGTGTCTCCAGTTAATTGTTTATGGCCCCCTTTATCTCATGAATTTTTCTTAGGACTTGGAGGCAGTCTAATCTATTTGCTTTTCAACTTTTCTATTTTATCTGTTTTACCCCATGAATTTTATGCCGCTTTTTAACTAGAGTTCTTCTAGAGCTGATCATGGGTGGCAACCTAATGCATTTCTTCGTGACTACTATTTCACTTTGTTTTTGGTCTCCATTTTCCAGTTCTATGTCTATCTGCTTAATCTGTTTTAGCAATCATTGCACGTCATCCTTATATTTAATCCGAACCAAAACATTTACCTTCACTTATAATTCTATACACGGTTTTCTAAACCTTACACATTTTTTGTTGACTTTTGGTATTTTCCTTATAAAATTGACATTCTTATGCTAGTCTCAACATTTCATATTCAGACCTAGTTCCTGTAGGTACTGGTGTTCCTGCATTATTTACTCACATTCTCATATTATTTGCTGTTGTATGTGCATTAGCACTTTGAAACTCACTTGGTGATCTTGCATCAGCAGAACGTAGAATGACCAAGTCACAATGTCTACGTGGTGACTCTGTTTTTCTGTAATGGGAAAAAAACAGCTCAAGTAATTGTAATGAATTTCCAAGTCTGATACACCTCAGGCATTGATCAGTCATCATTTTTTTTCTAAATAATAATTTCTATATGTTTAAACCAAACAAAAGAAACTTGATAGTTGAAACTAATTTGTTCTGTCAACTTACTCAAGAGTTTTGTTTCCTTTGTAAAAAAAGCTTAAATTCTTTGTTGCAATAATCTGCCTCAGGTTTTGATTTTATTGCCCCTTGCGAGCATTGCACTTCGTGTAATTAAAAGGCTGATACATCTTACACCCTCGGCAAACAAGGTATACAATTCTTTAATGAAAGGATTATGTTTGTGATGAATGGACTATATAGCTTGCAGTACTACCTTTCCTTTGCATTTTTAGCACATTTCTACTAGTGTACCCTTTGTAGGACATATGTGTTGGGTTATTGTCTGGAATGCAATAAAGTTTAAATGTAAATGAAGTTTCCGTCCGTGCGCTCTTTTACGGACACATGTAAATGAAGTTTAAATGAATCTGCTTAGTTTACAAGGGGCAATGAACGCTTGCATTTTATTACTAGTCAGAATAAACCAGCAACACACGTTGCACTACATTCTTGCAATGAATAACACCCCAAAGCTAAAGTAAAAAATTGATTGTTAAACCATAGTCAAGATACCTAGCTCCATTTTTAACCTTTTTCCTATGATTTTTAGGTTACAGTGGAGCATCTTGACCGTCTATACAAAGATTTTGGAAATGGAGATGTTGGGAAGAATGAGGATATGGATGAATTATCTCTTAATGACCAGAGTTTCAGCGCTCAAAAATCTTCAAAACCTTCTGACTTTCAAGCACTTTTTGGTGGGAATAATGAGGATCTCTTCATGATTGGTATCAAGTTCACCAGGTGAATTACGCATACATTATAGTTCTATTCAGATTTATTTTTTTGGCCGAGAAGAAGTCTCGTGAATTTCGAATATGTTAGCTTCATAAAATTTTTATTTTACATATGATCAGAAAGTGCTATAAGCCTTTTACTCCCGTTCTCAAAATTGATTATATGTTTATCAATTTTTTGTGCCTTAGTTATAGGAATTTTTTAATATAATTTCTTCCTTTTTATAGTTTGCAATTCTTGTTTCCCGAGAACGGAAACGTTTGCAACATCCATAAGCTTTAAGCTTTTTTTTAATACTATTTGTAAATTTTGTGTATTTTGTTTTTGAATTGCTCCTTTGATTGTGCCTTTTTTTTTCTTTTTTTTTTTTCAATTTGAATTTGAATTTGTAAATTTGTTTATTAATAAATTCTATTTTTTCATATAATCAAAATAAATTTATTTTTTCAACTTATTTGTATCAATTGTTTTATAGGAAGAGCATTAGGTTGTTCAGTGATTTCTATTCATCGGACATAATTGTCGCTTCACCCCTTGGTCTGATTACGGTGAGTTATTTTTTCCCTTAACTTCAAGGGGCATTTCTTAACCCAAAAATTTATATTTCCACTATGCCCCGAGTAGATATTTTCATACTTTGATTATTTGTAGGATTATGATTTTTTCAAATTTTCACTATAATGATATTCTAGCTCTTAATGTAAAATATGCTTAGTTTCAATTATTTACCGTGAAAATGAACCCCACCAATTATGATATATATAAGGTGTGGTCGGATATATTTTGTCATTTTTTTTTATAAAATTGGAAATGCATAATTTACTTATGAACACTTTTTCTCAGAAACTTGGCGAAATGGAGAAAAACAAGGAGAAAGATGTCGATTATCTTTCTTCCATTGAGGTATTACTTCTGATCAAGTGTATTCTTGTGTAGTTCCTCTTTTTCTTCGCTTATATGAAAATTATGCTTCATATGAACAGGTCCTAATCATTGATCACGCAGATATTATAGAAATGCAGGTATTTCTTGTGCTACTAAACTATAATCTTTGTTTATAGGCTTTATGATGCATTATAACCTTGAGCTCATGTGAATACTAGAACTGGTCCCATGTGAATACCGTTATTGAACACATGAATAAGATACCATCGAAGCAGCATGGAACTGATGTGATGCGGATAAGACAGTGGTATGTTCCAGATTATCTTTGTTCATTATTTTACTCAAATGTAAATCAAAAGAATCTATGTCTATTACAATAAAACGGTATCACATGAAACCTGTATTGATGACTTCCCTCTCCACTCTCCCCTCCCTTGCTACCCAACATCTCCATCGATCATGACTCCACTGCCACTATTGGGAGGGTCTACACAATTGAGATAGACCAAAGGTATAGAGTAGAAAGAATGAAAATCACAGACACCAAAGGATCACTCTTTCTACATCTCCATCCTGCAACCCTCTGTTCTTGGCTTGTAGATTGCTTCACAGATCTACAAGGTGGTGTTTGTCCCATCAATTTTGACATCCGTCCTTCCTCTGATGATACCTACCCTCTTTTCCCTTAAATTGTACCTTGCATGCTGACAGACTCCCATCCCCTCCCCAGCCTCAGATGGTCCACCCTATATAGTCAAAAACTCATTGGATTCTCTTTTGGGCTGAATGCATCCTCTACTTTTACTCGCCCAAATACGAAGGGCCTAATGGATTCCACAACAAGCCCTTTCCTTTGACCACTATACATCCAACCCACTTCATTCATCCCCCACCACATGTCTTGACCCATAGTGACCCAATAGATCCATTTCCTTCTCCCCCAGGCCCTACTGGATCTGCACCTAACCTGCTTCCCCTTCTTGCAGAGGCATTACCGACCCTCTCTCTCACTCATCTCTACAATCAAATTTTCTGTCACTATCCATTAAAAAAAACTGTTAATATCGATACAGAAAACTACTTATTTCGCCCCTTCCTCCTCTCCTCTGCTGCACCCTCTCCTTCCTCTCTTGCCTTCTCGCATCTTCTTCCCTGCATAGATCAACCCAGGCCCTCCCCTTTACCTGACCTTGGTGACTCAATTGTTGGCCAAACTTAGATGGAGCTTCTCAAACAACCGCTTCCCCCACCTCCCTAACTGACTTGGATGATGCAGTTGAAGACCCAACTAACTGGGCTTGTTTCCACAGTAAACAACGACAAACCTTCCTCCTCTCAACAAGGTGGGCTCACACCATTTGGATGATTATTACAAAGCATAATCCTGTCATAGTGATTCTTCAAGAAACTAAAACCTTCATGGAGCTCTTAGAACATTGATGGGACAGAGCTTGAGGCTAATGGAAGACACCGTTTTTGGCAAGATCTTCTGGACCTATCAGCCCTTTGTCTCGACAGGTGGATTCTAGGGGAGGATTTTTATGTCACTAGATGAGTAATGAGAAATCGACTTGCTATGTTAGTAGAAGCATGCGAAAATTTAGTTCTTTCACTGATTGCTGTAATCTCATCGACTTGCCCCTCCAAAATGGCCTTTACACTTGGTCTAGCTTTAGAGAGAACCCCATTTTGTCCCTCATTGGTAGATTCCTTGTCTCTAACCCTATCCTTTATAAATACAAAGATGCACCAGTCAAGCGTTTGGATTGGCCTACGTCCATCCATTTTCCCATCATGCTGGTTTTGGGTTCAATGAAATAGGGTTCCTACCTTTTTTGTTTGAAAATATGTGAATGGTGCACCACCCCTTTCTCCCTTTGATTCAAAATTGGAGTGTCAATACCTATGATAGATTGTAGAGAAGGTCTCCTTATATGGCCCTTTCTCCTTATATGTAAAGCCGATTCTAAATCTCAGAGCCATCTGTTTTTCTCATGCCACTTTGCTGCCAGGTTCTGGAAGGAGCTCTTTTCCTCCTGCTGTTGGTCTACTAACCTTCCTGATGAGATCAACAGCCTCCTTATGTTTTCGTTTGACATCCTTTTTCCTAGGATAAAAGTCTTATTTGGATGTACATTGTTCAGGCACTTGGAATGAAAGGAACAACCCTATTTTCAAGGAAAGGAAAGTTCTTTTGAGAGTTCTTTGAACAAGTTATCTTTGCTATGTGTTAGTACAAATGTTCTTCATTTTATTGTTCTTACAGTCTCTCTACACTTTTGTCCAATTAGAGATCCCTTCTGTAACTCCTTTGGTTTTGGGTTTTTCCTTTCTTTTAAATTTCATACATCAATGAAATTTGTTATATATATAATTAATCAACCTGTTTTCATTAGGTTTGCATGCTTGAAAATTTTATCCCATTATCTACATTTATGAAATCACTGTCATATTTATAGGTATCTTGATGGATATGCGAGGTTCTATAGGCAGTCAATAGTTTTGGGTTTTCACTCAAACCCAGGTAAGGTACACCTATTGTTTGTATGCAATCCAATCCATGTAGCTCAATTTCTTGAATCCCAAAATAATTGAGTTTCTAAGTCATTTTCTAACTTGATTTAATGCTACATACTATGTGAGTGAGAATACGCTTGGTGGGTTCAGAACTTTAATTTTGTTCTATGTCAAAAATGGCTGGAGTGGGTTATTTGATTAGACACTTGAGCAAGAGGGTTCTGCTATTTAAATTGTCGAACCATCTATAACAATGCTTTTAAACCATATGGGTGTTATTTATGTTGCAATGTCATCATGACATAGAGTGACTCGTGTTTTAATAATAACAATGGTCTTGAAAAATCTCATTTTGCTTAGTTTTTGTTTTAATTCTGATAATGATTTCAAAAAAAGAAAATGTTGTGCGTCAACTAGTTCACATTTTTAGGGAAAAGATATGAATATATAAATAACAATTATGAGTTTGGTAGGGGTCATTTGTTAATCTCTTTTGGGCAACGATAAATTAAATAGTAGCATGAACAAGTAATAAATAACAGGGAATTCAAGAAAATAAAATAAAAATGTATTAGATCAAGTTATAGTATCTGGCTATCTCTGCAAATGCAATTGCTTTACAGTACTACCACAGCGTACTGTGCAATTATCCCAAACTGCCGTTTTAGATATTTTCCCTTTAATGAATTATGAAATGGTTCGTTGTAAGCGGGAAATTTATTACCTCTCTGATGTTTAGATCTTGTATGAATAACTGTATTTTTATGACGTTGAATCTTTTATTATAATCTTAATGATTGCGATGAAGTATTTTTAATTTCTTTTACATCTTGTTGTTAATAGATATAAATGGATTTTTCAATCGCTACTGCAACAACTTCGAAGGAAAGGTGCATCTTTTTTCTTTGTTACATATTCTTAAAAAATTAGGAACCTGGAGATGGGCATTCAATGGCAGATTTTTTTTTTTTTTTGATTTACTGATTTTCTTTTACTTGGTATGGTTTCATCTCTATTTATTACATATCCTGAATGTTTAACATGACATGTGGTAGGTGAGGTTGTTATGTGAATACAAAGGCATTCTTCCAAAAGTGGTGCTCCAAGTCCGCCAGGTTTGTCTGCTTTTTCATGCTTTTCTTTTCCTTGCTCTTGCAGCAGTTGTTTTTCATAAGAACTTGAGAAAGAGTTCTAGGTGCTTCCTGCAAAAGCACCTTGAAGTTGTTTGAATTGTTTTTGAAATTGCTCATTTTGGGTACTTTTCTTGTGTGTATGTTTGTTTCAGGTGTACGAGAGATTTGAGGCAGACTCTATAGCTAATGTTGATGATGCTCGTCTTGAGTACTTTTCCAAGAAGGTTTGTTTCTTTTATTTTAGTGGTGTAATACAGAATGATTTTTCCTTGGGGGGAAATAGAAACATGTTAATTTTTTAGCTTCGTTTTGTCAAAAGATATGGGGCTTGATTTTGAAACTGGCTGTTAGTGTGATGCTGGCCTCCCCTGCAATAATTTTTAGATGATCGTTCATGCAGTGGTTAAAGCTTTTGAAATAGTTATAAATCTTTTCTTGATGTTCACAATGATTAACGATATTAGGCTGAGAATGGAATATATACGAGAAGTTTATTCTGCTTAAAATCTAGTATCACGCAGAGGTTGTTTTTGTTTTTTTTAAGGTTCTTATTTATCCTGTTAATCTTGATCAATTTTGATCTCAAATAGCAAATACTTCAGTTAGTTGTTTGAGGATTTGACTTGGTCGATCTAAGTGAAAATAAAGTCGGATAAACCAAACTATCTGGGAAAAAAGTTAGCGGAAGTGAGATTCAATACCCTTATTATTGATCTGATGATTTAAAATGGGTGTCTAATTTCTTCTTCAGGTGTTTCCAAAGATAAACGAATCTAGTCAGGTAACGTTTTTTTCACTATGATGACATTGTTTGATTGATGAAGTCTTACTTATATATTTTTGTCTTATCTTACCCGTGGAATTTTTCACTCAGGGTGGAGTCATGCTATTCATTAGTTCTTACTTCGAGTTTGTCAGAGTTCGGAACTTTTTGAAGATGCAGAATGCTTCATTCTGTCTTCTTGGAGAGTAAGAAACCTGTCGTTTTACTTCTAAACTGATGCATAAATTTATTGATTTTTTTTATTTTTTTATTATTATTTATTTTTTCTTCTTTTGCTGTATCCTTGATTGCTTCTGTTGTCATGCATAATGATCTAGTTCTGTTCTTTAGGTATACAAAGCAAAGTGACATCTCACGGGCGCGCAATTGGTTTTTTGAGGGAAAGCGGAAGATCATGTTATACACAGAGAGAGCTCATTTTTATCACAGATATAAGGTTACTTACAACGCTATATACCTTTCTAAAAAGCTTAATTTCGACTTCAATAGTGTATATTTGTTATCTGCTACTGAGAAACATTTGTGCGCGTCAGGTTTTGTGTTTTGGTAACTAACTTTCATGACCAGAATGGGAGAATATAAGGGGACAGAAAAGAACGATCGGGAGATTAGATCCCTAGCCACTCTAGTCTACCGGTTTGCAAAAAGTTTTTCCTGTTGGCAGTGATCCTAAAGAATTATAATTAGAAAACAAGGAACTTAGGGGGAGTACATTAAAAGTAGCTTAAACTTTTAATCATCTCCCATACATCCTCTAAATCACTCCACTTCTCTTTGGAATTTCAAAACCACAAACCTAACTGCATTAGACCATGAAAATTGAACTTCAGATTTTCTTTTCTAAAATTTTTACTACTTTAGCAGTTAGCAACAGCTTTTAGAGGGGCATGAAGCAAATTGGGATACTCTAGAGAAAACATTGAACCTAGATAACCTGCCATCGATGGAGAAAGAAACACTCCTCTGTTTACATGATGTTAAATTTTGAAACATCTTTTGTATTACAGTTGTATGTAAATGATTTACGTGCTGTAGTAAACTGAATTTCATTTATTAATCATGCTTATCCGACTATTCAAAATGATTGCTTAGCACAAGCATTTAGCATATATCATATACTCCCAATGAAGAAAATTTGTGTTTTATGTTGTATCTAACTTTAATTGTATCCTTGAGCTTCCATCAATTTTCATTTATTCAATAAAAAGTTACGTTTCTTGTTTAAAAAAAAAAAAAAAAAAAAAAAATTGTTTCTCTTGGTAGTTTCCGTTACTTGTGGTCTTCGGTAATAAAAATTGTTATCCTTGACCATGTATTTTCTTCTTGGTCTTAGATTCGTGGCATACAAAGCTTAATAATGTATTCCTTGCCGGAGAGGAAAGAGTTTTACCCTGAGGTAAACATGATGATTTTCTACTGGACTAATTATTAATATTATGTTACACCATATGTTTGATTTCATTATGACATCCCCACTACTCTTCAGATTGTAAATATGCTTGATGGATCCGACAACATGACATGCAGAGTTATATTTTCTCCTTTTGATCATCTCCGGGTAAGTGTCACTGTGCTGTTGTATTAGAACTTGTTTGAGGTTGATATTACGAATTCTTTTGCATGTCCAAGAGGTTTGAGTTCAATTCAAGATGCCATCTTGATGTGCGAGTGCTATATACATTATGCTATTACTTATAGTTGCAATGAGATCCCTGTTTCTTTCATTTTATTAGTTTTGAATTTCACATGACGAATTAACTGTTTTGAGTTCTTTGAGTAATCCTTCCTGGTATAAAAGACATAAAAAGAATGTCTAAATCCAGGACTAGTTAAACGAACATAGAGAAGTTACTACTTTGTATGACAGCTCCCAACCCTTGTGATTCGTGGTATTTTTTACGAACTTGGACTAAAAAATGGGAATTGTCTAGGTTTTATGTCAGTTGTTTTGTAAATCTATTTATTTGATGTATAACTCAATTGGTTAAGGCATATATTCTCAATCAAGATGGTCAAATGTTCAACACTCCTATCTCACATGTTGAACTAAAAAGATGTTGTCGTTGGAGTATAAAACTACTTAAGTGGCTTCAAATTACCGTTCTTCCCTTCCGCTCTTGCTCCGTTATACTAACCTATTATCAATTTTATGTTAGCTGGAGAGAATAGTTGGAACCGTGCCAGCAAAAAGGATGGGGACATCAGATAAGACTGTCTTTGTATTTTGCTAAGCCCCCCTTGTAACAGCCAGCATGCTCGCTGAAGGACCGAAACAGCCATGTGATGGTCTCTGCAAAAGTAGAGATGCGATGTCCCTATAACTGCCACAACATCGGAATCTCTTCGCGGCTTGGTCCAACAATTTTGACTCCTAAGTTCTGATTTTTTTTTCTTAATCTGATTATTATTTGTGTATTATGTACTTTTGAGATTTTCATTATGTTTATGTACTCAAAATTGAGGAAGAAACTAATGTTTATGTAGGCTTAAATCTTTAATTAACATTATGATTCCAATTAACTATCTGTCCTCTAAGGAAAA

mRNA sequence

TTCCTCCGAGTCTCACGTTTCCCCGCCACTTATTATTCTCCTTAAACGCGGTCTCTTTCTCTGCAACAACTCAGTGTTACCACCGTCGTCTTACTTCCGCTCGTGCCGCCGATTTTGCACTGATTGTTTACTCTCTGTCGTTACTGGGATCAATTATTCAGCAGGCAATACCATTGGATCCTGACGTGAGCATAGAAGCTGGGCATACTTTCAGAATTTTCCACTGAAAATATTCATCAATGGTGAAGCAGTTAGTTCGTAAACGAGGAGCCAGTGAGGCCGAGGAACTTGAAGTTTTCAAAGAGCAATCGAACTACGATAATTTGTTAATGCAATTACAATCATGTAATAAGGATGTTGCTGCTTCATGTATGAAAAGACAAAGACAAGAAGAAGGCAGAAGTGACACAGAGGATGACGAGGATAGCTGTCCTGAATCTTCTAGTGCATTAGAGGAGGAGGAAGAAGAGGAAGGGACTGATGATGAGTCACCTAAAAGTTCATCTTTGGGGAACAATATGTCTGAGCCAATGCCAAACAACGAAACTGAAGAGGACACTGAATCTGATAGGTCTGACACAGATCAGGAAAATGAACTTGAAGTTGGTTCGCATGGTGACCCTTCTACATCAGATATAACTAGTTCATTTAACAAACACATGGAGCACAAGTTATCAAAAGAAGAGGTTGAGAATTTCCCTAAAATGAAATGGAAATATACATGGGCGGTTCCTGCAGTAGGGATGTCTAACTGCAAGTGGTCAGGGACCGGAGAGTGCTTTCTAAAGGATTTAGAAACCAAATCTAGTAATTACAATCTTAAGCAAAGGTTATATGAGCACTGGTTGGATGTGTACAAGACATCTGGAGGCACTGACTTTCATTCGTCGAGACAAAGATTTTTCTTTTCCCTTTGCAACAGCTACCGGGATATACTGAACTGCAACAAGAAACCGTTTTATTTGAAAGGTCTTGAAGAAGACTCAAGTATCATGGATTCATATATTATGCATACTTTGAATCATGTTTTCAAAAGTGGAGACCTCATAACGAAGAACAATTCAAAAATGGCCAAGCATCAAGACTGTGCCGAGATTCTTAGTGGAGAGAAATTTCTTGATCATGGATTTACTCGTCCAAAGGTTTTGATTTTATTGCCCCTTGCGAGCATTGCACTTCGTGTAATTAAAAGGCTGATACATCTTACACCCTCGGCAAACAAGGTTACAGTGGAGCATCTTGACCGTCTATACAAAGATTTTGGAAATGGAGATGTTGGGAAGAATGAGGATATGGATGAATTATCTCTTAATGACCAGAGTTTCAGCGCTCAAAAATCTTCAAAACCTTCTGACTTTCAAGCACTTTTTGGTGGGAATAATGAGGATCTCTTCATGATTGGTATCAAGTTCACCAGGAAGAGCATTAGGTTGTTCAGTGATTTCTATTCATCGGACATAATTGTCGCTTCACCCCTTGGTCTGATTACGAAACTTGGCGAAATGGAGAAAAACAAGGAGAAAGATGTCGATTATCTTTCTTCCATTGAGGTCCTAATCATTGATCACGCAGATATTATAGAAATGCAGAACTGGTCCCATGTGAATACCGTTATTGAACACATGAATAAGATACCATCGAAGCAGCATGGAACTGATGTGATGCGGATAAGACAGTGGTATCTTGATGGATATGCGAGGTTCTATAGGCAGTCAATAGTTTTGGGTTTTCACTCAAACCCAGATATAAATGGATTTTTCAATCGCTACTGCAACAACTTCGAAGGAAAGGTGAGGTTGTTATGTGAATACAAAGGCATTCTTCCAAAAGTGGTGCTCCAAGTCCGCCAGGTGTACGAGAGATTTGAGGCAGACTCTATAGCTAATGTTGATGATGCTCGTCTTGAGTACTTTTCCAAGAAGGTGTTTCCAAAGATAAACGAATCTAGTCAGGGTGGAGTCATGCTATTCATTAGTTCTTACTTCGAGTTTGTCAGAGTTCGGAACTTTTTGAAGATGCAGAATGCTTCATTCTGTCTTCTTGGAGAGTATACAAAGCAAAGTGACATCTCACGGGCGCGCAATTGGTTTTTTGAGGGAAAGCGGAAGATCATGTTATACACAGAGAGAGCTCATTTTTATCACAGATATAAGATTCGTGGCATACAAAGCTTAATAATGTATTCCTTGCCGGAGAGGAAAGAGTTTTACCCTGAGATTGTAAATATGCTTGATGGATCCGACAACATGACATGCAGAGTTATATTTTCTCCTTTTGATCATCTCCGGCTGGAGAGAATAGTTGGAACCGTGCCAGCAAAAAGGATGGGGACATCAGATAAGACTGTCTTTGTATTTTGCTAAGCCCCCCTTGTAACAGCCAGCATGCTCGCTGAAGGACCGAAACAGCCATGTGATGGTCTCTGCAAAAGTAGAGATGCGATGTCCCTATAACTGCCACAACATCGGAATCTCTTCGCGGCTTGGTCCAACAATTTTGACTCCTAAGTTCTGATTTTTTTTTCTTAATCTGATTATTATTTGTGTATTATGTACTTTTGAGATTTTCATTATGTTTATGTACTCAAAATTGAGGAAGAAACTAATGTTTATGTAGGCTTAAATCTTTAATTAACATTATGATTCCAATTAACTATCTGTCCTCTAAGGAAAA

Coding sequence (CDS)

ATGGTGAAGCAGTTAGTTCGTAAACGAGGAGCCAGTGAGGCCGAGGAACTTGAAGTTTTCAAAGAGCAATCGAACTACGATAATTTGTTAATGCAATTACAATCATGTAATAAGGATGTTGCTGCTTCATGTATGAAAAGACAAAGACAAGAAGAAGGCAGAAGTGACACAGAGGATGACGAGGATAGCTGTCCTGAATCTTCTAGTGCATTAGAGGAGGAGGAAGAAGAGGAAGGGACTGATGATGAGTCACCTAAAAGTTCATCTTTGGGGAACAATATGTCTGAGCCAATGCCAAACAACGAAACTGAAGAGGACACTGAATCTGATAGGTCTGACACAGATCAGGAAAATGAACTTGAAGTTGGTTCGCATGGTGACCCTTCTACATCAGATATAACTAGTTCATTTAACAAACACATGGAGCACAAGTTATCAAAAGAAGAGGTTGAGAATTTCCCTAAAATGAAATGGAAATATACATGGGCGGTTCCTGCAGTAGGGATGTCTAACTGCAAGTGGTCAGGGACCGGAGAGTGCTTTCTAAAGGATTTAGAAACCAAATCTAGTAATTACAATCTTAAGCAAAGGTTATATGAGCACTGGTTGGATGTGTACAAGACATCTGGAGGCACTGACTTTCATTCGTCGAGACAAAGATTTTTCTTTTCCCTTTGCAACAGCTACCGGGATATACTGAACTGCAACAAGAAACCGTTTTATTTGAAAGGTCTTGAAGAAGACTCAAGTATCATGGATTCATATATTATGCATACTTTGAATCATGTTTTCAAAAGTGGAGACCTCATAACGAAGAACAATTCAAAAATGGCCAAGCATCAAGACTGTGCCGAGATTCTTAGTGGAGAGAAATTTCTTGATCATGGATTTACTCGTCCAAAGGTTTTGATTTTATTGCCCCTTGCGAGCATTGCACTTCGTGTAATTAAAAGGCTGATACATCTTACACCCTCGGCAAACAAGGTTACAGTGGAGCATCTTGACCGTCTATACAAAGATTTTGGAAATGGAGATGTTGGGAAGAATGAGGATATGGATGAATTATCTCTTAATGACCAGAGTTTCAGCGCTCAAAAATCTTCAAAACCTTCTGACTTTCAAGCACTTTTTGGTGGGAATAATGAGGATCTCTTCATGATTGGTATCAAGTTCACCAGGAAGAGCATTAGGTTGTTCAGTGATTTCTATTCATCGGACATAATTGTCGCTTCACCCCTTGGTCTGATTACGAAACTTGGCGAAATGGAGAAAAACAAGGAGAAAGATGTCGATTATCTTTCTTCCATTGAGGTCCTAATCATTGATCACGCAGATATTATAGAAATGCAGAACTGGTCCCATGTGAATACCGTTATTGAACACATGAATAAGATACCATCGAAGCAGCATGGAACTGATGTGATGCGGATAAGACAGTGGTATCTTGATGGATATGCGAGGTTCTATAGGCAGTCAATAGTTTTGGGTTTTCACTCAAACCCAGATATAAATGGATTTTTCAATCGCTACTGCAACAACTTCGAAGGAAAGGTGAGGTTGTTATGTGAATACAAAGGCATTCTTCCAAAAGTGGTGCTCCAAGTCCGCCAGGTGTACGAGAGATTTGAGGCAGACTCTATAGCTAATGTTGATGATGCTCGTCTTGAGTACTTTTCCAAGAAGGTGTTTCCAAAGATAAACGAATCTAGTCAGGGTGGAGTCATGCTATTCATTAGTTCTTACTTCGAGTTTGTCAGAGTTCGGAACTTTTTGAAGATGCAGAATGCTTCATTCTGTCTTCTTGGAGAGTATACAAAGCAAAGTGACATCTCACGGGCGCGCAATTGGTTTTTTGAGGGAAAGCGGAAGATCATGTTATACACAGAGAGAGCTCATTTTTATCACAGATATAAGATTCGTGGCATACAAAGCTTAATAATGTATTCCTTGCCGGAGAGGAAAGAGTTTTACCCTGAGATTGTAAATATGCTTGATGGATCCGACAACATGACATGCAGAGTTATATTTTCTCCTTTTGATCATCTCCGGCTGGAGAGAATAGTTGGAACCGTGCCAGCAAAAAGGATGGGGACATCAGATAAGACTGTCTTTGTATTTTGCTAA

Protein sequence

MVKQLVRKRGASEAEELEVFKEQSNYDNLLMQLQSCNKDVAASCMKRQRQEEGRSDTEDDEDSCPESSSALEEEEEEEGTDDESPKSSSLGNNMSEPMPNNETEEDTESDRSDTDQENELEVGSHGDPSTSDITSSFNKHMEHKLSKEEVENFPKMKWKYTWAVPAVGMSNCKWSGTGECFLKDLETKSSNYNLKQRLYEHWLDVYKTSGGTDFHSSRQRFFFSLCNSYRDILNCNKKPFYLKGLEEDSSIMDSYIMHTLNHVFKSGDLITKNNSKMAKHQDCAEILSGEKFLDHGFTRPKVLILLPLASIALRVIKRLIHLTPSANKVTVEHLDRLYKDFGNGDVGKNEDMDELSLNDQSFSAQKSSKPSDFQALFGGNNEDLFMIGIKFTRKSIRLFSDFYSSDIIVASPLGLITKLGEMEKNKEKDVDYLSSIEVLIIDHADIIEMQNWSHVNTVIEHMNKIPSKQHGTDVMRIRQWYLDGYARFYRQSIVLGFHSNPDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIANVDDARLEYFSKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFFEGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSDNMTCRVIFSPFDHLRLERIVGTVPAKRMGTSDKTVFVFC

Homology

[Close]

BLAST of CmaCh11G003750 vs. ExPASy Swiss-Prot
Match: B6JX19 (U3 small nucleolar RNA-associated protein 25 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) OX=402676 GN=utp25 PE=3 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.6e-97
Identity = 235/689 (34.11%), Postives = 376/689 (54.57%), Query Frame = 0


Query: 26  YDNLLMQLQSCNKDVAASCMKRQRQEEGRSDTEDDEDSCPESSSALEEEEEEEGTDDESP 85
           Y  LL+ L+S  K        + ++EE     +       + S A E EE+EE  +D   
Sbjct: 14  YQALLVMLKSDGK-------HKLKEEEAPRKRQKRNKVTEKLSVAQEPEEDEENIEDAEQ 73

Query: 86  KSSSLGNNMSEPMPNNETEEDTESDRSDTDQENELEVGSHGDPSTSDITSSFNKHMEHKL 145
           +S+S    + E    +  +ED      +  +EN+     +  PST ++ S+  K    ++
Sbjct: 74  ESASEVQELLE--AGDHLQED------EVPKENDPFHTHYEAPSTEELASAITKLNNGEI 133

Query: 146 SKEEVENFPKMKWKYTWAVPAVGMSNCKWSGTGECFLKDLETKSSNYNLKQRLYEHWLDV 205
            KE ++    +  K    VP+  +S  + S      + DL+       LKQRL   +L +
Sbjct: 134 KKENLD--CSLGVKQIQQVPSEKLS-LRLSSFAPANVSDLK-------LKQRLLRSYLSI 193

Query: 206 YKTSGGTDFHSSRQRFFFSLCNSYRDILNCNKKPFYLKGLEEDSSIMDSYIMHTLNHVFK 265
             +   T+      +  F    +Y D+L  N         + D+ + + Y +H +NHV+K
Sbjct: 194 KPSGNMTNLQCELAKHIF----NYEDVLFSNVSS------KCDTLVRNLYTLHAINHVYK 253

Query: 266 SGDLITKNNSKMAKHQDCAEILSGEKFLDHGFTRPKVLILLPLASIALRVIKRLIHLTPS 325
             D + KN++K++++Q+        +F D G+TRPKVLILLP  +  L+ ++ LI  T +
Sbjct: 254 VRDHVLKNSAKLSQNQEL-------EFRDQGYTRPKVLILLPTRNACLQFVETLIQFTGA 313

Query: 326 ANKVTVEHLDRLYKDFGNGDVGKNEDMDELSLNDQSFSAQKSSKPSDFQALFGGNNEDLF 385
                VE+  R    F N          E S+  +  S     KP DF+ LF GN +D+F
Sbjct: 314 EQ---VENRKR----FSN----------EFSIETEVIS---EKKPEDFRQLFAGNTDDMF 373

Query: 386 MIGIKFTRKSIRLFSDFYSSDIIVASPLGLITKLGEMEKNKEKDVDYLSSIEVLIIDHAD 445
            +GIKFTRK+I+LFS FY+SDIIVASPLGL   +G  + +K++D DYLSSIEV I+D AD
Sbjct: 374 RLGIKFTRKTIKLFSQFYNSDIIVASPLGLRMAIGN-KSDKKRDFDYLSSIEVAIVDQAD 433

Query: 446 IIEMQNWSHVNTVIEHMNKIPSKQHGTDVMRIRQWYLDGYARFYRQSIVLGFHSNPDING 505
            + MQNW H+  V EHMNK+P   HG D  R+R WYL+  +R+ RQ+++   ++  DIN 
Sbjct: 434 ALLMQNWEHLEYVFEHMNKLPKNSHGCDFSRVRPWYLEEQSRYLRQTLMFSHYNAVDINA 493

Query: 506 FFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYERFEADSIANVDDARLEYFSKKVFPK 565
           F+     N  G+V+   + KG+L  +   + Q + R + +S+  V DAR E+F+  + P+
Sbjct: 494 FYLHEMLNLAGRVKFHPKQKGVLNSLGYHITQTFARVQTESLLKVPDARFEHFTSTLVPQ 553

Query: 566 INESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFFEGKRKIM 625
           + +++ GG++++I SYF++VRVRN+ + +  S+  + EYTK SDISRAR  F++ +++IM
Sbjct: 554 LLKNAMGGILVYIPSYFDYVRVRNYFEDEAISYVSICEYTKNSDISRARTQFYQNRKQIM 613

Query: 626 LYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIVNM-----LDG---SDNMTCRVIFS 685
           LYTERAH + R+  RG++ +IMY+ P   +FY E+  M      DG   +D   CRV+++
Sbjct: 614 LYTERAHHFRRFDFRGVRGIIMYAPPTNAQFYVELTRMPMRSISDGILDADAAKCRVLYT 639

Query: 686 PFDHLRLERIVGTVPAKRMGTSDKTVFVF 707
            +D + +E IVG+     M      ++ F
Sbjct: 674 KYDMIPMEPIVGSERVTNMCKGKHDIYEF 639

[Close]

BLAST of CmaCh11G003750 vs. ExPASy Swiss-Prot
Match: Q6PEH4 (U3 small nucleolar RNA-associated protein 25 homolog OS=Danio rerio OX=7955 GN=utp25 PE=1 SV=2)

HSP 1 Score: 350.5 bits (898), Expect = 4.4e-95
Identity = 241/731 (32.97%), Postives = 385/731 (52.67%), Query Frame = 0


Query: 8   KRGASEAEELEVFKEQSNYDNLLMQLQSCNKDVAASCMKRQRQEEGRSDTEDDEDSCPES 67
           +R   ++E+    ++ S Y  LL  +   ++D   S    + +E    D E++ +   +S
Sbjct: 52  QRPEPDSEDDSDAEQPSAYQKLLSTMIQGDEDDVES----EDEESEEEDNEEEAEVEGDS 111

Query: 68  SSALEEEEEEEGTDDE---SPKSSSLGNNMSEPMP---NNETEEDTESDRSD--TDQEN- 127
              +E+ +EE+G D E     K     + + +  P   N + EE+ E++     TD++N 
Sbjct: 112 EEEVEDTDEEDGNDAEEVLEDKVEETSDKLQKKHPEKTNGDVEENEEAEMEGEFTDKKNE 171

Query: 128 -----ELEVGSHGDPSTSDITSS---FNKHMEHKLSKEEVENF---PKMKWKYTWAVPAV 187
                E  + + G+ +T+        F KH E +LS+EEV       K+K +  WA   V
Sbjct: 172 AAFCLETNMPAEGEENTAQQEQDEDMFVKHQEIELSEEEVGRISQGSKVKTQVKWAKLGV 231

Query: 188 GMSNC---KWSGTGECFLKDLETKSSNYNLKQRLYEHWLDVYKTSGGTDFHSSRQRFFFS 247
               C   ++   G+     L        + + L  +W  +    G     +  Q+    
Sbjct: 232 LQCMCPLERFPAIGQASSAPLPP------IHKTLEANWHLLNLPFGAATDVTELQKEMLG 291

Query: 248 LCNSYRDILNCNKKPFYLKGLEEDSSIMDSYIMHTLNHVFKSGDLITKNNSKMAKHQDCA 307
           L  +YRD+   N  P     L+E   +  +Y +H LNHV K+   + +NN+K+ + ++  
Sbjct: 292 LMGTYRDLYLANLSP-----LKEAKEVRSAYCLHALNHVLKANSRVLRNNAKLKESKN-- 351

Query: 308 EILSGEKFLDHGFTRPKVLILLPLASIALRVIKRLIH-LTPSANKVTVEHLDRLYKDFGN 367
                E F D G TRPKVLIL+P    ALRV++  +  L P   K    +  R  +++G 
Sbjct: 352 ---GDEDFRDQGLTRPKVLILVPFRDGALRVVQTFMTLLEPKGKKTDASNKKRFKEEYG- 411

Query: 368 GDVGKNEDMDELSLNDQSFSAQKSSKPSDFQALFGGNNEDLFMIGIKFTRKSIRLFSDFY 427
                 E+ DE   N Q        +P D+ A+F GN +D F IG+   R S+RL++ FY
Sbjct: 412 ------EETDEKPPNLQ--------RPDDYHAVFSGNIDDHFRIGMSILRHSMRLYAPFY 471

Query: 428 SSDIIVASPLGLITKLGEMEKNKEKDVDYLSSIEVLIIDHADIIEMQNWSHVNTVIEHMN 487
           SSDII+ASPLGL T LG  E  K++D D+LSSIE+LI+D AD+  MQNW H+  V+EH+N
Sbjct: 472 SSDIIIASPLGLRTVLG-AEGEKKRDHDFLSSIELLIVDQADVFLMQNWEHLLHVLEHLN 531

Query: 488 KIPSKQHGTDVMRIRQWYLDGYARFYRQSIVLGFHSNPDINGFFNRYCNNFEGKVRLLCE 547
             P   HG D  R+R W L+ +A +YRQ++V      P I     ++C+N+ G+V     
Sbjct: 532 LQPLDSHGVDFSRVRMWNLNNWAAYYRQTLVFSAIQEPQITNILTKHCHNYRGQVCSKTI 591

Query: 548 YK-GILPKVVLQVRQVYERFEADSIANVDDARLEYFSKKVFPKINESSQGGVMLFISSYF 607
            K G + +V++Q+  V++ F +DS  +  DAR ++F  K+ P+  +S      +++ SYF
Sbjct: 592 PKIGSICQVLVQLPHVFQMFHSDSFMD-QDARFQFFVDKILPQYRDSVMSHTFIYVPSYF 651

Query: 608 EFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFFEGKRKIMLYTERAHFYHRYKIRGI 667
           +FVR+RN+LK ++ SF  + EY+++S++SRAR++F +G+++ +L++ER HFY RY I+GI
Sbjct: 652 DFVRLRNYLKKEDVSFANISEYSQRSEVSRARHYFQKGEKQFLLFSERFHFYKRYTIKGI 711

Query: 668 QSLIMYSLPERKEFYPEIVNMLD-------GSDNMTCRVIFSPFDHLRLERIVGTVPAKR 707
            +LI Y LP    FY E+ NML         S + TC  ++S +D  RL  I G   A +
Sbjct: 712 HNLIFYGLPTYPHFYSEVCNMLQAGVREGGASVSFTCTALYSRYDVHRLAAITGADRAAQ 745

[Close]

BLAST of CmaCh11G003750 vs. ExPASy Swiss-Prot
Match: Q642T7 (U3 small nucleolar RNA-associated protein 25 homolog OS=Xenopus tropicalis OX=8364 GN=utp25 PE=2 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 6.3e-94
Identity = 241/739 (32.61%), Postives = 376/739 (50.88%), Query Frame = 0


Query: 4   QLVRKRGASEAEELEVFKEQSN------YDNLLMQLQSCNKDVAASCMKRQRQEEGRSDT 63
           Q+V+   +SE E     + +S+      Y  LL  L + + +        + +    ++ 
Sbjct: 45  QVVQLPESSEDESRSESEAESDPEPVNMYHKLLATLNTVSDEEEEESDDEEEEALEEAEE 104

Query: 64  EDDEDSCPESSSALEEEEEEE------GTDDESP-KSSSLGNNMSEPMPNNETEEDT--- 123
           ED+ +   E S A +E+ E+E      G  DE P ++   G+N  E    +   E+    
Sbjct: 105 EDEAEEVGEESEAEDEDNEDESDGEGHGQMDELPVEAEKAGDNEEEERAGDPAAEEAGEF 164

Query: 124 ---------ESDRSDTDQENELEVGSHGDPSTSDITSSFNKHMEHKLSKEEVENFPKMKW 183
                      + +  D++NE          T      F +H+  +L ++++        
Sbjct: 165 TDAKHESKFSLETNFMDEDNEDSKDESVPCPTVATEDPFVQHVGRELEEQDISKIGTNPK 224

Query: 184 KYTWAVPAVGMSNCKWSGTGECFLK-DLETKSSNYNLKQRLYEHWLDVYKTSGGTDFHSS 243
           K +   PA+G      S      LK + ET      L + L+  W  V       D   +
Sbjct: 225 KASLKWPALGQLGVSSSLPQLQPLKVEKETDLQKLYLHKPLFSTWPKVNSPFLSVDKEQN 284

Query: 244 ---RQRFFFSLCNSYRDILNCNKKPFYLKGLEEDSSIMDSYIMHTLNHVFKSGDLITKNN 303
               QR  FS+ NSYRD+    + P       +   I   Y +H LNHV K+   +  NN
Sbjct: 285 FTPLQRELFSIMNSYRDLFFPARSP-----TAQGEEIRHVYCLHALNHVLKANAQVLNNN 344

Query: 304 SKMAKHQDCAEILSGEKFLDHGFTRPKVLILLPLASIALRVIKRLIHLTP-SANKVTVEH 363
           S   + +D    L  E   D G TRPKVLI++P    ALR+++ LI L      KV V +
Sbjct: 345 S---QKRDQKPGLDEEDLRDQGLTRPKVLIVVPFRESALRIVQILISLMEVGGRKVDVSN 404

Query: 364 LDRLYKDFGNGDVGKNEDMDELSLNDQSFSAQKSSKPSDFQALFGGNNEDLFMIGIKFTR 423
             R  ++FG+    +  ++                +P D++A+F GN +D F IG+   +
Sbjct: 405 KKRFKEEFGSEPEDRPPNL---------------KRPEDYEAVFAGNIDDHFRIGVAILQ 464

Query: 424 KSIRLFSDFYSSDIIVASPLGLITKLGEMEKNKEKDVDYLSSIEVLIIDHADIIEMQNWS 483
           KS+RL+S FYSSDII+ASP+GL T +G  E  K++D D+LSSIEVLI+D AD+  MQNW 
Sbjct: 465 KSMRLYSPFYSSDIIIASPVGLRTIIGS-EGEKKRDFDFLSSIEVLILDQADLYLMQNWE 524

Query: 484 HVNTVIEHMNKIPSKQHGTDVMRIRQWYLDGYARFYRQSIVLGFHSNPDINGFFNRYCNN 543
           HV  ++ H+N  P+  HG D  R+R W L  +A++YRQ+++      P IN  FN++C N
Sbjct: 525 HVLHLMAHLNLQPTDSHGVDFSRVRMWNLSNWAKYYRQTLLFSSLQEPQINSIFNKHCFN 584

Query: 544 FEGKVRLL-CEYKGILPKVVLQVRQVYERFEADSIANVDDARLEYFSKKVFPKINESSQG 603
           + G+V +      G +  VV+Q+  V++R EADS+  V DAR E+F+ K+ P+  ++   
Sbjct: 585 YCGQVAVRNMPVTGSISHVVVQLPHVFQRLEADSLLTVIDARFEFFTSKILPQYRDAIMS 644

Query: 604 GVMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFFEGKRKIMLYTERAH 663
             +++I SYF++VR+RN+ K +  +F  + EYT +S +SRAR +F +G+R+ +L TER H
Sbjct: 645 HTLIYIPSYFDYVRLRNYFKKEELNFTHICEYTNRSGVSRARQFFLKGERQFLLVTERFH 704

Query: 664 FYHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDG-----SDNMTCRVIFSPFDHLRLERI 707
           FY RY ++GI++LI Y LP    FY E+ NM+           TC V++S +D  RL  +
Sbjct: 705 FYKRYTLKGIRNLIFYELPTYPHFYSEVCNMMKAWHRGEEATWTCTVLYSKYDAQRLAAV 759

[Close]

BLAST of CmaCh11G003750 vs. ExPASy Swiss-Prot
Match: Q8BTT6 (U3 small nucleolar RNA-associated protein 25 homolog OS=Mus musculus OX=10090 GN=Utp25 PE=1 SV=2)

HSP 1 Score: 345.5 bits (885), Expect = 1.4e-93
Identity = 242/738 (32.79%), Postives = 386/738 (52.30%), Query Frame = 0


Query: 12  SEAEELEVFKEQSNYDNLLMQLQSCNKDVAASCMKRQRQEEGRSDTEDDEDSCPESSSAL 71
           SE+E     +  S Y  LL  L    K+V+    + + +EE   + E++E+   E  SA+
Sbjct: 58  SESESESEQEHVSGYHRLLATL----KNVSEEEEEEEEEEEEEEEEEEEEEEEEEDDSAV 117

Query: 72  EEEE--EEEGTDDESPKSSSLGNNMSE--------PMPNNETEEDTE--------SDRSD 131
            + E  EE G++D S   +++     E         + +N  E+D E        S    
Sbjct: 118 GDAEMNEEAGSEDGSVGEAAVSEAAEEAAETQEHMSLADNSKEKDGEEPPGVSQKSSEEF 177

Query: 132 TDQENE---------LEVGSHGDPSTSDITSSFNKHMEHKLSKEEVE---NFPKMKWKYT 191
           TD ++E         LE  S G  S       F +H+  +L ++E++   + P    +  
Sbjct: 178 TDVKHESLFSLETNFLEEDSGGSCSQRPSQDPFQQHVNKELKEKEIQAAASSPPATQQLK 237

Query: 192 WAVPAVGMSNCKWSGTGECFLKDLETKSSNYNLKQRLYEHWLDVYK--TSGGTDFHSS-- 251
           W V    + + K+  T E F    +      +L++ L   W        SG    +SS  
Sbjct: 238 WPVLGHLVFSSKFQKT-ETFKPPKDIDLKLLHLQKPLESTWAKTNSQFLSGPQKSNSSFT 297

Query: 252 -RQRFFFSLCNSYRDILNCNKKPFYLKGLEEDSSIMDSYIMHTLNHVFKSGDLITKNNSK 311
             Q+  F + NSYRD+    +       L+    +   Y +H +NHV K+   +  NNS+
Sbjct: 298 PLQKELFLIMNSYRDLFYPER-----TALKNGEEVRHVYCLHAINHVLKANAQVLANNSR 357

Query: 312 MAKHQDCAEILSGEKFLDHGFTRPKVLILLPLASIALRVIKRLIHLT--PSANKVTVEHL 371
             +      +   + F D G TRPKVLI++P    ALRV++  I L    S  K+ V + 
Sbjct: 358 --RRSQKLGVGEDDDFRDQGLTRPKVLIVVPFREAALRVVQLFISLLEGDSKKKIIVSNK 417

Query: 372 DRLYKDFGNGDVGKNEDMDELSLNDQSFSAQKSSKPSDFQALFGGNNEDLFMIGIKFTRK 431
            R   ++G+       D +E   N          +P D++A+F GN +D F IG+   ++
Sbjct: 418 KRFQGEYGS-------DPEERPPN--------LKRPEDYEAVFVGNIDDHFRIGVAILQR 477

Query: 432 SIRLFSDFYSSDIIVASPLGLITKLGEMEKNKEKDVDYLSSIEVLIIDHADIIEMQNWSH 491
           SIRL++ FYSSDI++ASPLGL T +G  E  K++D D+LSS+E+LIID ADI  MQNW H
Sbjct: 478 SIRLYAPFYSSDILIASPLGLRTIIGG-EGEKKRDFDFLSSVELLIIDQADIYLMQNWEH 537

Query: 492 VNTVIEHMNKIPSKQHGTDVMRIRQWYLDGYARFYRQSIVLGFHSNPDINGFFNRYCNNF 551
           V  ++ HMN +P   HG D  R+R W L+ ++++YRQ+++ G   +  IN  FN++C N 
Sbjct: 538 VLHLMNHMNLLPLDSHGVDFSRVRMWSLNNWSKYYRQTLLFGALQDAQINSVFNKHCINA 597

Query: 552 EGKVRLL-CEYKGILPKVVLQVRQVYERFEADSIANVDDARLEYFSKKVFPKINESSQGG 611
           +G+V +      G +  V++Q+  V++R EA  +++V DAR  +F  K+ P+  ++    
Sbjct: 598 QGQVAVRNVPMTGSISHVLVQLPHVFQRMEAQDLSSVIDARFHFFINKILPQYRDAVMSH 657

Query: 612 VMLFISSYFEFVRVRNFLKMQNASFCLLGEYTKQSDISRARNWFFEGKRKIMLYTERAHF 671
            ++++ SYF+FVR+RN+ K +  +F  + EYT++S ISRAR++F +G+++ +L TER HF
Sbjct: 658 TLIYVPSYFDFVRLRNYFKKEELNFTHICEYTQKSGISRARHFFLQGEKQFLLLTERFHF 717

Query: 672 YHRYKIRGIQSLIMYSLPERKEFYPEIVNMLDGSD-----NMTCRVIFSPFDHLRLERIV 707
           Y RY I+GI++LI Y LP    FY E+ NML  +        TC V++S +D  RL  +V
Sbjct: 718 YKRYTIKGIRNLIFYELPTYPHFYSEVCNMLRATSRGEEATWTCTVLYSKYDAQRLAAVV 767

[Close]

BLAST of CmaCh11G003750 vs. ExPASy Swiss-Prot
Match: Q68CQ4 (U3 small nucleolar RNA-associated protein 25 homolog OS=Homo sapiens OX=9606 GN=UTP25 PE=1 SV=2)

HSP 1 Score: 344.7 bits (883), Expect = 2.4e-93
Identity = 239/723 (33.06%), Postives = 386/723 (53.39%), Query Frame = 0


Query: 12  SEAEELEVFKEQSNYDNLLMQLQSCNKDVAASCMKRQRQEEGRSDTEDDEDSCPESSSAL 71
           SE++     ++ S Y  LL  L++ +++        + +EE  S  +D E +  +  S +
Sbjct: 58  SESDSESEPQQVSGYHRLLATLKNVSEEEEED---EEEEEEEDSIVDDAEMNDEDGGSDV 117

Query: 72  EEEEEEEGTDDESPKSSSLG------NNMSEPMPNNETEEDTESDRSDTD----QENELE 131
             EEE      ESP++ +L        +  EP   ++T  +  +D         + N LE
Sbjct: 118 SVEEEMAAESTESPENVALSADPEGKEDGEEPPGTSQTSPEEFTDAKHESLFSLETNFLE 177

Query: 132 VGSHGDPSTSDITSSFNKHMEHKLSKEEVE---NFPKMKWKYTWAVPAVGMSNCKWSGTG 191
             S  + S       F +H+  +L ++ ++     PK   +  W +      + K+    
Sbjct: 178 EESGDNSSLKASQDPFLQHVNKELKEKAIQAVATNPKTTHELKWPILGQLFFSSKFQKL- 237

Query: 192 ECFL--KDLETKSSNYNLKQRLYEHWLDV-YKTSGGTDFHSS----RQRFFFSLCNSYRD 251
           E F   KD++ KS   +L++ L   W     +   G    SS     Q+  F + NSYRD
Sbjct: 238 ETFKPPKDIDLKS--LHLQKPLESTWTKTNSQFLSGPQKSSSPFTPLQKELFLIMNSYRD 297

Query: 252 ILNCNKKPFYLKGLEEDSSIMDSYIMHTLNHVFKSGDLITKNNSKMAKHQDCAEILSGEK 311
           +    +       L+    I   Y +H +NH+ K+   +  NNS+  +      +   + 
Sbjct: 298 LFYPER-----TALKNGEEIRHVYCLHVINHILKANAQVLGNNSR--RRSQKFGVGDDDD 357

Query: 312 FLDHGFTRPKVLILLPLASIALRVIKRLIHLT--PSANKVTVEHLDRLYKDFGNGDVGKN 371
           F D G TRPKVLI++P    ALRV++  I L    S  K+ V +  R   ++G+      
Sbjct: 358 FRDQGLTRPKVLIVVPFREAALRVVQLFISLLEGDSKKKIIVSNKKRFQGEYGS------ 417

Query: 372 EDMDELSLNDQSFSAQKSSKPSDFQALFGGNNEDLFMIGIKFTRKSIRLFSDFYSSDIIV 431
            D +E   N          +P D++A+F GN +D F IG+   ++SIRL++ FYSSDI++
Sbjct: 418 -DPEERPPN--------LKRPEDYEAVFVGNIDDHFRIGVAILQRSIRLYAPFYSSDILI 477

Query: 432 ASPLGLITKLGEMEKNKEKDVDYLSSIEVLIIDHADIIEMQNWSHVNTVIEHMNKIPSKQ 491
           ASPLGL T +G  E  K++D D+LSSIE+LIID ADI  MQNW HV  ++ HMN +P   
Sbjct: 478 ASPLGLRTIIGG-EGEKKRDFDFLSSIELLIIDQADIYLMQNWEHVLHLMNHMNLLPLDS 537

Query: 492 HGTDVMRIRQWYLDGYARFYRQSIVLGFHSNPDINGFFNRYCNNFEGKVRLL-CEYKGIL 551
           HG D  R+R W L+ ++++YRQ+++ G   +  IN  FN+YC N +G+V +      G +
Sbjct: 538 HGVDFSRVRMWSLNNWSKYYRQTLLFGALQDAQINSVFNKYCVNMQGQVAVRNVPMTGSI 597

Query: 552 PKVVLQVRQVYERFEADSIANVDDARLEYFSKKVFPKINESSQGGVMLFISSYFEFVRVR 611
             V++Q+  V++R EA+++A+V DAR  +F  K+ P+  ++     +++I SYF+FVR+R
Sbjct: 598 SHVLVQLPHVFQRMEAENLASVIDARFNFFVNKILPQYRDAVMSHTLIYIPSYFDFVRLR 657

Query: 612 NFLKMQNASFCLLGEYTKQSDISRARNWFFEGKRKIMLYTERAHFYHRYKIRGIQSLIMY 671
           N+ K +  +F  + EYT++S +SRAR++F +G+++ +L+TER HFY RY I+GI++LI Y
Sbjct: 658 NYFKKEELNFTHICEYTQKSGVSRARHFFLQGEKQFLLFTERFHFYKRYTIKGIRNLIFY 717

Query: 672 SLPERKEFYPEIVNMLDGSD-----NMTCRVIFSPFDHLRLERIVGTVPAKRMGTSDKTV 707
            LP    FY EI NML  ++       TC V++S +D  RL  +VG   A +M  S+K V
Sbjct: 718 ELPTYPHFYSEICNMLRATNRGEEATWTCTVLYSKYDAQRLAAVVGVERAAQMLQSNKNV 751

[Close]

BLAST of CmaCh11G003750 vs. TAIR 10
Match: AT1G17690.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Digestive organ expansion factor, predicted (InterPro:IPR010678); Has 25006 Blast hits to 13379 proteins in 904 species: Archae - 102; Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants - 1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI BLink). )

HSP 1 Score: 773.9 bits (1997), Expect = 1.1e-223
Identity = 412/707 (58.27%), Postives = 523/707 (73.97%), Query Frame = 0


Query: 13  EAE-ELEVFKEQSNYDNLLMQLQSCNKDVAASCMKRQRQEEGRSDT---EDDEDSCPESS 72
           EAE E  V++E + Y NLL+ L S NK VA    +RQR+EEG+SDT   EDDED   E +
Sbjct: 49  EAESEAMVYREPTQYQNLLVSLGSSNKVVADMNKRRQREEEGKSDTEEDEDDEDEDEEEN 108

Query: 73  SALEEEEEEEGTDDES--PKSSSLGNNMSEPMPNNETE-EDTESDRSDTDQE-NELEVGS 132
           S  ++    +G DD+S      +LG    +   +N+ + E+ + D  +TD+E +EL    
Sbjct: 109 SGSDDLSSTDGEDDKSQGDDQETLGGLTDDTQEDNDNQSEEEDPDDYETDEEVHELSTNG 168

Query: 133 HGDPSTSDITSSFNKHMEHKLSKEEVENFPKMKWKYTWAVPAVGMSNCKWSGTGECFLKD 192
                 S   S+F++H+ HKLS EEVE  PK KWK+ W  PA  M NCKW GT E FL  
Sbjct: 169 QSFVDASSSISAFSEHLSHKLSSEEVETLPKGKWKFKWESPAFDMPNCKWKGTSENFLDG 228

Query: 193 LETKSSNYNLKQRLYEHWLDVYKTSGGTDFHSSRQRFFFSLCNSYRDILNCNKKPFYLKG 252
           +++  + Y LK +LY HWL +YK  GG D  SS++R FFS+CNSY DIL+ NKKPFY  G
Sbjct: 229 IQS-DAPYGLKPKLYNHWLQLYKKCGGKDLDSSKRRKFFSICNSYLDILHSNKKPFYHCG 288

Query: 253 LEEDSSIMDSYIMHTLNHVFKSGDLITKNNSKMAKHQDCA--EILSGEKFLDHGFTRPKV 312
            +EDSS MD+Y+MH+LNH+FK+ DL+ KN SK+AKH++ +  EILS + FLD GFTRPKV
Sbjct: 289 SDEDSSAMDAYLMHSLNHIFKTRDLVKKNESKIAKHRETSEEEILSDDGFLDQGFTRPKV 348

Query: 313 LILLPLASIALRVIKRLIHLTPSANKVTVEHLDRLYKDFGNGDVGKNEDMDELSLNDQSF 372
           LILLPL SIA RV+KRLI LTP + +V VEHLDR   +FG  +   + D ++ +  + + 
Sbjct: 349 LILLPLRSIAFRVVKRLIQLTPESQRVNVEHLDRFNDEFGCEEDTDDCDGEKTTSKNGNS 408

Query: 373 SAQKSSKPSDFQALFG-GNNEDLFMIGIKFTRKSIRLFSDFYSSDIIVASPLGLITKLGE 432
             QKSSKPSD+QALFG  NN+D FM+GIK TRKSIRL+ DFYSSDIIVASPL L   +G 
Sbjct: 409 IKQKSSKPSDWQALFGANNNDDEFMLGIKHTRKSIRLYGDFYSSDIIVASPLKLHMAIGA 468

Query: 433 MEKNKEKDVDYLSSIEVLIIDHADIIEMQNWSHVNTVIEHMNKIPSKQHGTDVMRIRQWY 492
            E+NKE+DVDYLSSIEVL+IDHADII MQNWS + TV++++N++P+KQHGT+VMRIR  Y
Sbjct: 469 AEENKERDVDYLSSIEVLVIDHADIISMQNWSFLATVVDYLNRLPTKQHGTNVMRIRPLY 528

Query: 493 LDGYARFYRQSIVLGFHSNPDINGFFNRYCNNFEGKVRLLCEYKGILPKVVLQVRQVYER 552
           LDG+ARFYRQSI+L  +  P++N  F R+C N++GK+++ CEYKG+L KV+L VRQ+YER
Sbjct: 529 LDGHARFYRQSIILSSYLTPEMNSLFGRHCLNYKGKMKMACEYKGVLEKVLLPVRQIYER 588

Query: 553 FEADSIANVDDARLEYFSKKVFPKINESSQGGVMLFISSYFEFVRVRNFLKMQNASFCLL 612
           F+A SI  VDDARLEYF+KK+FPKI +S QGGVM+FI SYFEFVR+RNFL  QN SFCLL
Sbjct: 589 FDAASITQVDDARLEYFTKKIFPKIKDSVQGGVMIFIHSYFEFVRLRNFLNTQNTSFCLL 648

Query: 613 GEYTKQSDISRARNWFFEGKRKIMLYTERAHFYHRYKIRGIQSLIMYSLPERKEFYPEIV 672
           G+Y K +DISRAR  FF G RKIMLYTERA+FY RYKIRGI++LI+YSLPERKEFYPEI+
Sbjct: 649 GDYAKNADISRAREQFFVGSRKIMLYTERAYFYKRYKIRGIKNLILYSLPERKEFYPEIM 708

Query: 673 NML-DGSDNMTCRVIFSPFDHLRLERIVGTVPAKRMGTSDKTVFVFC 708
           NML +GS +M    +FS FD L+LERIVG+  AKRM TS+K +F FC
Sbjct: 709 NMLEEGSHDMMSTALFSRFDMLQLERIVGSTSAKRMITSEKNMFAFC 754

The following BLAST results are available for this feature:

BLAST of CmaCh11G003750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B6JX19	3.6e-97	34.11	U3 small nucleolar RNA-associated protein 25 OS=Schizosaccharomyces japonicus (s...	[more]
Q6PEH4	4.4e-95	32.97	U3 small nucleolar RNA-associated protein 25 homolog OS=Danio rerio OX=7955 GN=u...	[more]
Q642T7	6.3e-94	32.61	U3 small nucleolar RNA-associated protein 25 homolog OS=Xenopus tropicalis OX=83...	[more]
Q8BTT6	1.4e-93	32.79	U3 small nucleolar RNA-associated protein 25 homolog OS=Mus musculus OX=10090 GN...	[more]
Q68CQ4	2.4e-93	33.06	U3 small nucleolar RNA-associated protein 25 homolog OS=Homo sapiens OX=9606 GN=...	[more]

BLAST of CmaCh11G003750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17690.1	1.1e-223	58.27	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010678	U3 small nucleolar RNA-associated protein 25	PFAM	PF06862	UTP25	coord: 219..706 e-value: 1.2E-168 score: 561.8
IPR010678	U3 small nucleolar RNA-associated protein 25	PANTHER	PTHR12933	ORF PROTEIN-RELATED	coord: 11..707
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G003750.1	CmaCh11G003750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0034511	U3 snoRNA binding