CmaCh11G001530 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh11G001530
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionVacuolar protein sorting-associated protein 29
LocationCma_Chr11: 803440 .. 805742 (+)
RNA-Seq ExpressionCmaCh11G001530
SyntenyCmaCh11G001530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTAATTTTGACCCCTCCGTACCTCTCTACGATACTGATTCAAGCTTTTCCTTCACGATTCCTACTTCCTGAAATTTCACGGCATTCGAAGTTCTACAGGGAGGCATTTTAATGCCGGCTTCCGCCAATTAATCAAACCCCTCTGGTATTATTGATCGTGAAGTTCTTTTGATTCTGATGCAGAAATTATAATTTTTTACATTCAATTCTGTTCTATTTCATGCCCAATTCCTCAGATGATCAGCTTCTGGGTATGTCTCGCTTAGCTGATTTCTTTTTTTTGGACAGAATTGTAAAGTGGGTTTGGAGTGAGAATGGTGTTGGTGTTAGCTTTGGGGGATTTGCATATACCACATAGAGCCCCTGACCTGCCGGAGAAGTTCAAGTCTATGCTTGTTCCTGGCAAGATTCAGCACATCATCTGCACCGGCAACCTTTGTATCAAAGTATGTTCAAATCTTCTTATTCAATTTTCATCTTTCCTTGGAAATCCTCAATCTGTCCTATCCTAGTCTTGATTTTCCCTTGCATCATTAATCTTACTGATGATTTTAATTACTTTTGGGTCTGATTTCATCATCATCTTTTCCTTAGAAAGTGTCCTGGATAGTTTTATGTGCATTATTTTTTCCTCTTTTGATATACTATTCATTTGTTTCTTATTTGCTGCTCACTATATCATATTTAAGTTTATCCCAAGGATCCATCATCCAAGTAAGTAAAGAGGTCATGCTGGTAACATTCTTTTGTTCCGTTAAATTGCATAAGATTTGGAGAAACTTTCCAGGGACAATGCACTATTCTGTTTTGGTGATTGTAACATCACCAATTGGGTAGTAGTTCAGTGGATTTTGCCCCATATATTGAAATGCTTAGTTAATCAACATATAAGCTCATCCCATTCTTAACTTGAACCAAATTTTCTCCATTATGTTTACTGGGCCTTTGGGTTATTTTAGTTTAAACCAAACTTTTACAACTTGTAATGATGATCTTTGTTCAATATTCCTTGTGACTTAACTCTAAATGTGACGCTTTATGACTGAAGATCTTAGATTTAAGGAAAAGGAAAACTGTGGATTCGAAATCCTTTTCTGGGAAACTTGTTTGCATTAAATATCTCATGATTTAATAGAAAACATCAAGTTCATGTTGTTGGAATGAGCATTAACTTCTGCTTGGATCTCTCTGTTCATCATATATGGGTTCGAACTTTTGGGGCTTTGATCAATATGTTTATCACCAACTTGCATGTAATTTGTTTAATTGATCGTACAAGAAATGGAGCTGCGTTGTTGAATTGGTTTATATCTCCTTGGGAGAAAAATTGATGTGATGGTTCAAAGTTTATTGTTGACATTTACAGGAAGTTCACGACTACTTGAAAACTATTTGTCCTGATTTGCACATTACACGGGGCGAATATGATGAAGAAACGCGTTATCCAGAGACAAAAACTCTGACTATTGGACAATTTAAATTGGGACTGGGCCATGGGCATCAGGTACTGTCTACCATTATAAACTTCAAGAGCCTGAATATTGGAGCTTCTGATTGATTGTCTTTTGTAACCATGAACAGCAAGTTATATTTCATCTGAGCAAACAAAATTTCTGCTCTTCAGTATTTGCTACCAGAAGTCACCACAAGAAAATAAGTGGTGTTATCATGTAGAAATTTAGCATTTATTTGTTGGTGGCTGGCTTTTGTTTGTAGGTTATTCCATGGGGAGACTTAGACTCGCTTGCCATGATGCAGAGGCAGCTAGACGTAGACATCCTTGTCACTGGTCATACCCATCAATTTACAGCTTACAAACATGAGGGAGGTGTCGTGATTAACCCCGGATCTGCAACAGGTGCGTATAGCAGCATCACCTATGATGTCAACCCGAGCTTTGTCCTCATGGACATCGATGGCCTTCGTGTTGTGGTCTACGTTTACGAACTCATCGATGGAGAGGTTAAGGTAGACAAGATTGATTTCAAGAAGACAACCACAACGGGTCATTGAGAAGAAACAAATTGCCTTTACATAAACATCCCGAGTTACTTTCTTTTATGGAGTTGTGATGCATGTTTCTGGAGAAATGTTAGTAATGGCCCGATGGATGTTCTTGTTTTTTTTTTTTTTCCTTCTTTTTTGTTTAAAGAAAATGTAAGCGTAAGCTAATCGACCATCAACATTTGAGATGAAAGTTAGTATATTACCGTTGTGTTTGTTTTGATGAAAGGATCTCAACTCAACTCTTGGATCTAAGATGAGAAAAGGATTCATGAAGAAAACTAAACTGATACTTTATT

mRNA sequence

CCTAATTTTGACCCCTCCGTACCTCTCTACGATACTGATTCAAGCTTTTCCTTCACGATTCCTACTTCCTGAAATTTCACGGCATTCGAAGTTCTACAGGGAGGCATTTTAATGCCGGCTTCCGCCAATTAATCAAACCCCTCTGAATTGTAAAGTGGGTTTGGAGTGAGAATGGTGTTGGTGTTAGCTTTGGGGGATTTGCATATACCACATAGAGCCCCTGACCTGCCGGAGAAGTTCAAGTCTATGCTTGTTCCTGGCAAGATTCAGCACATCATCTGCACCGGCAACCTTTGTATCAAAGAAGTTCACGACTACTTGAAAACTATTTGTCCTGATTTGCACATTACACGGGGCGAATATGATGAAGAAACGCGTTATCCAGAGACAAAAACTCTGACTATTGGACAATTTAAATTGGGACTGGGCCATGGGCATCAGGTTATTCCATGGGGAGACTTAGACTCGCTTGCCATGATGCAGAGGCAGCTAGACGTAGACATCCTTGTCACTGGTCATACCCATCAATTTACAGCTTACAAACATGAGGGAGGTGTCGTGATTAACCCCGGATCTGCAACAGGTGCGTATAGCAGCATCACCTATGATGTCAACCCGAGCTTTGTCCTCATGGACATCGATGGCCTTCGTGTTGTGGTCTACGTTTACGAACTCATCGATGGAGAGGTTAAGGTAGACAAGATTGATTTCAAGAAGACAACCACAACGGGTCATTGAGAAGAAACAAATTGCCTTTACATAAACATCCCGAGTTACTTTCTTTTATGGAGTTGTGATGCATGTTTCTGGAGAAATGTTAGTAATGGCCCGATGGATGTTCTTGTTTTTTTTTTTTTTCCTTCTTTTTTGTTTAAAGAAAATGTAAGCGTAAGCTAATCGACCATCAACATTTGAGATGAAAGTTAGTATATTACCGTTGTGTTTGTTTTGATGAAAGGATCTCAACTCAACTCTTGGATCTAAGATGAGAAAAGGATTCATGAAGAAAACTAAACTGATACTTTATT

Coding sequence (CDS)

ATGGTGTTGGTGTTAGCTTTGGGGGATTTGCATATACCACATAGAGCCCCTGACCTGCCGGAGAAGTTCAAGTCTATGCTTGTTCCTGGCAAGATTCAGCACATCATCTGCACCGGCAACCTTTGTATCAAAGAAGTTCACGACTACTTGAAAACTATTTGTCCTGATTTGCACATTACACGGGGCGAATATGATGAAGAAACGCGTTATCCAGAGACAAAAACTCTGACTATTGGACAATTTAAATTGGGACTGGGCCATGGGCATCAGGTTATTCCATGGGGAGACTTAGACTCGCTTGCCATGATGCAGAGGCAGCTAGACGTAGACATCCTTGTCACTGGTCATACCCATCAATTTACAGCTTACAAACATGAGGGAGGTGTCGTGATTAACCCCGGATCTGCAACAGGTGCGTATAGCAGCATCACCTATGATGTCAACCCGAGCTTTGTCCTCATGGACATCGATGGCCTTCGTGTTGTGGTCTACGTTTACGAACTCATCGATGGAGAGGTTAAGGTAGACAAGATTGATTTCAAGAAGACAACCACAACGGGTCATTGA

Protein sequence

MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHITRGEYDEETRYPETKTLTIGQFKLGLGHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKKTTTTGH
Homology
[Close]
BLAST of CmaCh11G001530 vs. ExPASy Swiss-Prot
Match: Q9STT2 (Vacuolar protein sorting-associated protein 29 OS=Arabidopsis thaliana OX=3702 GN=VPS29 PE=2 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 2.4e-96
Identity = 167/186 (89.78%), Postives = 173/186 (93.01%), Query Frame = 0 

Query: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
           MVLVLALGDLH+PHRA DLP KFKSMLVPGKIQHIICTGNLCIKE+HDYLKTICPDLHI 
Sbjct: 1   MVLVLALGDLHVPHRAADLPPKFKSMLVPGKIQHIICTGNLCIKEIHDYLKTICPDLHIV 60

Query: 61  RGEYDEETRYPETKTLTIGQFKLGLGHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120
           RGE+DE+ RYPE KTLTIGQFKLGL HGHQVIPWGDLDSLAM+QRQL VDILVTGHTHQF
Sbjct: 61  RGEFDEDARYPENKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLGVDILVTGHTHQF 120

Query: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180
           TAYKHEGGVVINPGSATGAYSSI  DVNPSFVLMDIDG R VVYVYELIDGEVKVDKI+F
Sbjct: 121 TAYKHEGGVVINPGSATGAYSSINQDVNPSFVLMDIDGFRAVVYVYELIDGEVKVDKIEF 180

Query: 181 KKTTTT 187
           KK  TT
Sbjct: 181 KKPPTT 186

[Close]
BLAST of CmaCh11G001530 vs. ExPASy Swiss-Prot
Match: Q7ZV68 (Vacuolar protein sorting-associated protein 29 OS=Danio rerio OX=7955 GN=vps29 PE=2 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.1e-69
Identity = 118/182 (64.84%), Postives = 149/182 (81.87%), Query Frame = 0 

Query: 2   VLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHITR 61
           +LVL LGDLHIPHR   LP KFK +LVPGKIQHI+CTGNLC KE +DYLKT+  D+HI R
Sbjct: 1   MLVLVLGDLHIPHRCNTLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60

Query: 62  GEYDEETRYPETKTLTIGQFKLGLGHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQFT 121
           G++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA++QRQLDVDIL++GHTH+F 
Sbjct: 61  GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQLDVDILISGHTHKFE 120

Query: 122 AYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFK 181
           A+++E    INPGSATGAYS++  ++ PSFVLMDI    VV YVY+LI  +VKV++I++K
Sbjct: 121 AFENENKFYINPGSATGAYSALESNITPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 180

Query: 182 KT 184
           K+
Sbjct: 181 KS 182

[Close]
BLAST of CmaCh11G001530 vs. ExPASy Swiss-Prot
Match: Q9QZ88 (Vacuolar protein sorting-associated protein 29 OS=Mus musculus OX=10090 GN=Vps29 PE=1 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.9e-69
Identity = 117/182 (64.29%), Postives = 148/182 (81.32%), Query Frame = 0 

Query: 2   VLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHITR 61
           +LVL LGDLHIPHR   LP KFK +LVPGKIQHI+CTGNLC KE +DYLKT+  D+HI R
Sbjct: 1   MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60

Query: 62  GEYDEETRYPETKTLTIGQFKLGLGHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQFT 121
           G++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA++QRQ DVDIL++GHTH+F 
Sbjct: 61  GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFE 120

Query: 122 AYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFK 181
           A++HE    INPGSATGAY+++  ++ PSFVLMDI    VV YVY+LI  +VKV++I++K
Sbjct: 121 AFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 180

Query: 182 KT 184
           K+
Sbjct: 181 KS 182

[Close]
BLAST of CmaCh11G001530 vs. ExPASy Swiss-Prot
Match: Q5R9Z1 (Vacuolar protein sorting-associated protein 29 OS=Pongo abelii OX=9601 GN=VPS29 PE=2 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.9e-69
Identity = 117/182 (64.29%), Postives = 148/182 (81.32%), Query Frame = 0 

Query: 2   VLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHITR 61
           +LVL LGDLHIPHR   LP KFK +LVPGKIQHI+CTGNLC KE +DYLKT+  D+HI R
Sbjct: 1   MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60

Query: 62  GEYDEETRYPETKTLTIGQFKLGLGHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQFT 121
           G++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA++QRQ DVDIL++GHTH+F 
Sbjct: 61  GDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFE 120

Query: 122 AYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFK 181
           A++HE    INPGSATGAY+++  ++ PSFVLMDI    VV YVY+LI  +VKV++I++K
Sbjct: 121 AFEHENKFYINPGSATGAYNALEANIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 180

Query: 182 KT 184
           K+
Sbjct: 181 KS 182

[Close]
BLAST of CmaCh11G001530 vs. ExPASy Swiss-Prot
Match: B2RZ78 (Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2)

HSP 1 Score: 263.5 bits (672), Expect = 1.9e-69
Identity = 117/182 (64.29%), Postives = 148/182 (81.32%), Query Frame = 0 

Query: 2   VLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHITR 61
           +LVL LGDLHIPHR   LP KFK +LVPGKIQHI+CTGNLC KE +DYLKT+  D+HI R
Sbjct: 1   MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60

Query: 62  GEYDEETRYPETKTLTIGQFKLGLGHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQFT 121
           G++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA++QRQ DVDIL++GHTH+F 
Sbjct: 61  GDFDESLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFE 120

Query: 122 AYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFK 181
           A++HE    INPGSATGAY+++  ++ PSFVLMDI    VV YVY+LI  +VKV++I++K
Sbjct: 121 AFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 180

Query: 182 KT 184
           K+
Sbjct: 181 KS 182

[Close]
BLAST of CmaCh11G001530 vs. TAIR 10
Match: AT3G47810.2 (Calcineurin-like metallo-phosphoesterase superfamily protein )

HSP 1 Score: 352.8 bits (904), Expect = 1.7e-97
Identity = 167/186 (89.78%), Postives = 173/186 (93.01%), Query Frame = 0 

Query: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
           MVLVLALGDLH+PHRA DLP KFKSMLVPGKIQHIICTGNLCIKE+HDYLKTICPDLHI 
Sbjct: 1   MVLVLALGDLHVPHRAADLPPKFKSMLVPGKIQHIICTGNLCIKEIHDYLKTICPDLHIV 60

Query: 61  RGEYDEETRYPETKTLTIGQFKLGLGHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120
           RGE+DE+ RYPE KTLTIGQFKLGL HGHQVIPWGDLDSLAM+QRQL VDILVTGHTHQF
Sbjct: 61  RGEFDEDARYPENKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLGVDILVTGHTHQF 120

Query: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180
           TAYKHEGGVVINPGSATGAYSSI  DVNPSFVLMDIDG R VVYVYELIDGEVKVDKI+F
Sbjct: 121 TAYKHEGGVVINPGSATGAYSSINQDVNPSFVLMDIDGFRAVVYVYELIDGEVKVDKIEF 180

Query: 181 KKTTTT 187
           KK  TT
Sbjct: 181 KKPPTT 186

[Close]
BLAST of CmaCh11G001530 vs. TAIR 10
Match: AT3G47810.1 (Calcineurin-like metallo-phosphoesterase superfamily protein )

HSP 1 Score: 352.8 bits (904), Expect = 1.7e-97
Identity = 167/186 (89.78%), Postives = 173/186 (93.01%), Query Frame = 0 

Query: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
           MVLVLALGDLH+PHRA DLP KFKSMLVPGKIQHIICTGNLCIKE+HDYLKTICPDLHI 
Sbjct: 1   MVLVLALGDLHVPHRAADLPPKFKSMLVPGKIQHIICTGNLCIKEIHDYLKTICPDLHIV 60

Query: 61  RGEYDEETRYPETKTLTIGQFKLGLGHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120
           RGE+DE+ RYPE KTLTIGQFKLGL HGHQVIPWGDLDSLAM+QRQL VDILVTGHTHQF
Sbjct: 61  RGEFDEDARYPENKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLGVDILVTGHTHQF 120

Query: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180
           TAYKHEGGVVINPGSATGAYSSI  DVNPSFVLMDIDG R VVYVYELIDGEVKVDKI+F
Sbjct: 121 TAYKHEGGVVINPGSATGAYSSINQDVNPSFVLMDIDGFRAVVYVYELIDGEVKVDKIEF 180

Query: 181 KKTTTT 187
           KK  TT
Sbjct: 181 KKPPTT 186

[Close]
BLAST of CmaCh11G001530 vs. TAIR 10
Match: AT3G47810.3 (Calcineurin-like metallo-phosphoesterase superfamily protein )

HSP 1 Score: 352.8 bits (904), Expect = 1.7e-97
Identity = 167/186 (89.78%), Postives = 173/186 (93.01%), Query Frame = 0 

Query: 1   MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHIT 60
           MVLVLALGDLH+PHRA DLP KFKSMLVPGKIQHIICTGNLCIKE+HDYLKTICPDLHI 
Sbjct: 1   MVLVLALGDLHVPHRAADLPPKFKSMLVPGKIQHIICTGNLCIKEIHDYLKTICPDLHIV 60

Query: 61  RGEYDEETRYPETKTLTIGQFKLGLGHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQF 120
           RGE+DE+ RYPE KTLTIGQFKLGL HGHQVIPWGDLDSLAM+QRQL VDILVTGHTHQF
Sbjct: 61  RGEFDEDARYPENKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLGVDILVTGHTHQF 120

Query: 121 TAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF 180
           TAYKHEGGVVINPGSATGAYSSI  DVNPSFVLMDIDG R VVYVYELIDGEVKVDKI+F
Sbjct: 121 TAYKHEGGVVINPGSATGAYSSINQDVNPSFVLMDIDGFRAVVYVYELIDGEVKVDKIEF 180

Query: 181 KKTTTT 187
           KK  TT
Sbjct: 181 KKPPTT 186

The following BLAST results are available for this feature:
BLAST of CmaCh11G001530 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9STT22.4e-9689.78Vacuolar protein sorting-associated protein 29 OS=Arabidopsis thaliana OX=3702 G... [more]
Q7ZV681.1e-6964.84Vacuolar protein sorting-associated protein 29 OS=Danio rerio OX=7955 GN=vps29 P... [more]
Q9QZ881.9e-6964.29Vacuolar protein sorting-associated protein 29 OS=Mus musculus OX=10090 GN=Vps29... [more]
Q5R9Z11.9e-6964.29Vacuolar protein sorting-associated protein 29 OS=Pongo abelii OX=9601 GN=VPS29 ... [more]
B2RZ781.9e-6964.29Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=... [more]
BLAST of CmaCh11G001530 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G47810.21.7e-9789.78Calcineurin-like metallo-phosphoesterase superfamily protein [more]
AT3G47810.11.7e-9789.78Calcineurin-like metallo-phosphoesterase superfamily protein [more]
AT3G47810.31.7e-9789.78Calcineurin-like metallo-phosphoesterase superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024654Calcineurin-like phosphoesterase domain, lpxH-typePFAMPF12850Metallophos_2coord: 4..157
e-value: 2.4E-19
score: 70.1
IPR000979Phosphodiesterase MJ0936/Vps29TIGRFAMTIGR00040TIGR00040coord: 3..157
e-value: 8.6E-29
score: 98.6
IPR000979Phosphodiesterase MJ0936/Vps29PANTHERPTHR11124VACUOLAR SORTING PROTEIN VPS29coord: 1..186
IPR029052Metallo-dependent phosphatase-likeGENE3D3.60.21.10coord: 1..182
e-value: 2.5E-79
score: 267.8
IPR029052Metallo-dependent phosphatase-likeSUPERFAMILY56300Metallo-dependent phosphatasescoord: 1..181
NoneNo IPR availablePANTHERPTHR11124:SF25VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 29coord: 1..186
IPR028661Vacuolar protein sorting-associated protein 29CDDcd07394MPP_Vps29coord: 3..180
e-value: 4.41801E-122
score: 340.34

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G001530.1CmaCh11G001530.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0042147 retrograde transport, endosome to Golgi
cellular_component GO:0005829 cytosol
cellular_component GO:0005768 endosome
cellular_component GO:0030904 retromer complex