CmaCh11G001060 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh11G001060
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionubiquitin-conjugating enzyme E2 5-like
LocationCma_Chr11: 567722 .. 571767 (-)
RNA-Seq ExpressionCmaCh11G001060
SyntenyCmaCh11G001060
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCTAAATCAAAACCTAATTTCCACGTTAATGGCGGTCATGGTTGACAGTGAAACTTTGGACGGCCATGGCAAATCCCACTTTCAAACTCGGGAAAACCAATGGGGGCTGAAATGGCAAACAGGAAAGACTCAAAAATTGTAACCATAACCCCCACAGAACCTTTACTCTGCCACGTACACGATTCCTTTTTCCATCATTTACATCTCAATTCTTCCTCCACTTTCAATCCCCAATCCAATTTCATATATATTCTCTCCCTCGCCCTCCCTTTCTTCCCTTCCCAATTTTGCGTTCGCTTCCAACGATTCTCCATTACCCACTGCCTAATTTCTCTGCTTCTTCTGAGGTACTCATCTGTGTAATTTATATTTATCTAAGCTTTTGAGAATTTCGGGGCTCGACGTAGATATACTCCACAGATCTTCATGTTTATATCAATTCTTCTGTCTGTGTTCGTCGACTTATAAATGAGAGAGAAATGGATCATGCAAACTGGTTTTGTTAGTGGACGATCACATTCAAACCCACCAGACATTGTCTAGTCTGATCAAATTTTGATCACCCACCAGGCCTTGTTCCTGATCCAGGAATTCCTCGTTCTTCATCATTATTAGTTGTTTGGCTAGTATCACTTGTTTTATTTAGTGGTGAGTGGTTATGAATAAGAACAATGTGGTAATTGTTAAACCAGTTGGTACCTAATCTTCACGTTTTCTGTTGTTTGATGTTTGGCACATGAACTTTAGAAGCTGGCTTGTTTTGAATTAGAAATGCAACATTTCAATGATATCAGATGCTTTTCTGGCATTTGTTGAAACTGGTAACTTTTGTGTCGATGCATTCACTGTTCATGGTTAGGCTTTGGCTTAGCATAGTGTATTAGCTAGTGTCTTTAATATTATCAGGTTTATTCTTAATCATTCTCATTTCCATGTATTTTTCACTTCATTTCTTTACATCTAAAAGGTGAACTCCGTTAGTAACTTCTAAAGCTCAAGAATCTGTCTCTTGCAGATTTTGGAAGTACTGCGCTTTCAAGATGTCTTCTCCAAGCAAAAGGAGAGAAATGGATGTCATGAAATTGTAAGAGGCCTTTGTTATTTATTGTGATTTCGTGTTCTTATTTCAGTCATTGGTTGTTGTGGTTCTTCTACGTCGTCTGGATGGCTGTTTATGAGCCTTCCAACAACCAAGAAGATGCTATTTTGAAAACGAAAAATGATCTACTAGTACTGCAATAAGTTAGAGGAAAGTAACCTGTTAATTTTCTTTTTAGTTATATTTCTAAGCATGTTTGGTCATTACTTAAGTGTGTTATTTATCATTAAAAGCTAGGTGAGTTCAATGGTGTGTGTTTATTGCTATTGAATGTAGTGAGCTGTGGCTGAGATTTGATTAAACTTGGGGTTGTAAATATGGTTGCAGCAAAAGTAATCTTATCCTGTCATTATTATGTGCTAGAAAACATGTTAGGCATGCTGGCCTAGAACTGGCCTAGAACTGGCCTAGAACTGGCCCTGCATTGGGGTGGTCGGGTTTGAGTTTGAATATCGTTCGCTGTTAAGCCTACTGAATGGCTAATGCTATCAATTGGAGAGGAGAACGAAGCATTTTTTATAAAGGTGTGGAAACCTCTCTGGCCCAAAAGGGAAAGCCCAAAGAGGATAATATCTGCTAGTGGTGAGCTTGGACCGTACAATTGTAGTATAGAAGCCACACTTGTACACATGCTATCTTTTACTCGAAAATGTGGAATTGAGGTTCTAGATTCCTAATATCGTATGATGGCGGCCATAAATTTCTGTTGGTTGATCTTGTGGTTTATGTTGTCCAGGATGATGAGTGACTACAACGTGGAGATGATAAACGATGGACTAAACGAATTCAACGTGGAGTTCCACGGTCCCAAAGAAAGTATTGCTCGTCTTTCGCCTCTGTCAAATATGCATTTCATAGTCGTCGATGGAATAGCAAGTATTTGTTTGTGGGTGTGTATGAGCCTTATTGGATTGCAAATGAACAATTTAGCAAACATGCCGGCAGTCTAAAGCCAATTCTTTTATCTTATTTGGAGTCTCCTGAAAATTTATCCTTGAAGCGAGGTGTTTCTACTGCTTTCCTGTGTAATTTATGGACACTTAAAATGCATCTAGTTTAGTTGCATGTTTTCATACTCGATGAACGATTTTTTACCACATTTGGATCTAGAGCGTTTTCTTAAGTTTCGTTGTCCCTGCAGGCTTATATGAAACTGGTGTTTGGAAAATCCGTGTTGAGCTTCCTGACGCGTATCCATATAAGTCTCCTTCAATTGGCTTTGTGAACAAGATATTCCACCCAAATGTTGATGAACTGTAAGTATCTTTTCTCTTTTAAACATCAAATGAAATCGGTTCAATGCTTCACGTATTCGTAGCAAAGTATTTTACGTACGAGTTTTACCTGCAGATCTGGTTCTGTGTGCTTGGATGTGATTAATCAGTCTTGGAGTCCGATGTTCGGTAATTATCTACCATCCTCACCAAACCTCTATTAACACCTTACTAGACTCGAGTGTTTTCTGTTTATGTGTTCTGTGATAAGATGATATTAAACAATAGTTGTAACTGCCCAATCCCACCGCTAGCAGATATTCTCCTCTTTGGGTTTTCCCTTTCGGGCTTCCCTTCAAGGTTTTTAAAATGCGTCTGCTAGGGAGAGATTTCCACACTCTTATGAAGGATGCCTTGTTCTCCTCCTCAACCGAAGTGGGATCTCACAATCCACTCCCTTCGGGGCTAGCGTCCTTGCTAGCACTCATTCCCTTCTCCAATCGATGTGAGACCCCTCAATCCACCTTCCTTCGGGGCCCAGCGTCCTTGCTGGCACACTGCCTCATATCCACCCCTTTCAGGGCTCAGCCTCCTCACTGGCAAATCACCCAATGTCTGACTCTAATACCATTTGTAATAGTCCAAGTCCACCACTAGCACATATTGTCTTCTTTGGGCTTTCTTTTTCGGGTTTCCCTAAAAGGTTTTTACAACGAGTCTGCTAGGGGGAGGTTTCCACATCCGTATAAAGAATGTTTCATTCTCCTTCTCAACCGATGTGGATCTCAACTTTTGATGTGTTTGGAAATATAATTTAAAGTTCATGATCCATGGGACCATATGAACTGTATTGTGACTCCCAAAATATAGGACTAAACTTGGTCCTCATTTTACATATATTTGGGTTTGCATATGTTTGTGTCTATTCTTACCACTTTCTTTTGGGCTCTGCAGATCTTTTAAACGTTTTCGAGGTTTTTCTTCCCCAGCTTCTTCTTTATCCCAATCCTTCAGACCCCCTTAACGGCGATGCTGCATCGCTTATGATGAAGGACCGGAAGCAGTACGATGAAAAAGTTAAAGGTATATAGTTCTCGCAGTCGAGTATATAGTCGACTTTGACACCATTTCTATGATAACTCAATATCCACTTCCATGTGGATACAGAGTACTGCGAAAAGTATGCAAAGGAGAACACAGCAGAAGATGACAGTGAAGAAGAGGATGAAATGAGCGATAACGAAAGCGGTTCAAGCGACGGGGATGTTACTCGACATGCCGATCCATGATTGAAAGCTAAGTCATTATATCAATCGTTTCTCCATTTAGCAGCAACGACTAAATTTACATGTTTGGCTTTCCATAGGTTTACTGGCTGTACGATTATATCGAAAATGCCCAACAGAGTTTCAGAGTTTTAGATGTCTCTTAGATTTTCATGGCAATGCTGTGTTAAGTGACTTCAAATGTAAAAACGGTCCAGTAGGGGACACAAAGGAAGTTGACAATATTTTATCAGTTAATGAAATAGACTATACAAATGTGAAACTTTGGTTTGCTTAGCCCATCGTGAAGAAAGGAACATTGTTATATTGTCTCGGAAAATTCAGTATTAATGAGTATCTCATTCTTCTTAGAACTACAGTCTCTTTCAGACATCTCAACTTGGCGATACAACAATTTAAAAGTTACTTGTTTAGTTTTCAAAACTTGATTTAACTTTTGAAAACAT

mRNA sequence

GGCTAAATCAAAACCTAATTTCCACGTTAATGGCGGTCATGGTTGACAGTGAAACTTTGGACGGCCATGGCAAATCCCACTTTCAAACTCGGGAAAACCAATGGGGGCTGAAATGGCAAACAGGAAAGACTCAAAAATTGTAACCATAACCCCCACAGAACCTTTACTCTGCCACGTACACGATTCCTTTTTCCATCATTTACATCTCAATTCTTCCTCCACTTTCAATCCCCAATCCAATTTCATATATATTCTCTCCCTCGCCCTCCCTTTCTTCCCTTCCCAATTTTGCGTTCGCTTCCAACGATTCTCCATTACCCACTGCCTAATTTCTCTGCTTCTTCTGAGATTTTGGAAGTACTGCGCTTTCAAGATGTCTTCTCCAAGCAAAAGGAGAGAAATGGATGTCATGAAATTGATGATGAGTGACTACAACGTGGAGATGATAAACGATGGACTAAACGAATTCAACGTGGAGTTCCACGGTCCCAAAGAAAGCTTATATGAAACTGGTGTTTGGAAAATCCGTGTTGAGCTTCCTGACGCGTATCCATATAAGTCTCCTTCAATTGGCTTTGTGAACAAGATATTCCACCCAAATGTTGATGAACTATCTGGTTCTGTGTGCTTGGATGTGATTAATCAGTCTTGGAGTCCGATGTTCGATCTTTTAAACGTTTTCGAGGTTTTTCTTCCCCAGCTTCTTCTTTATCCCAATCCTTCAGACCCCCTTAACGGCGATGCTGCATCGCTTATGATGAAGGACCGGAAGCAGTACGATGAAAAAGTTAAAGAGTACTGCGAAAAGTATGCAAAGGAGAACACAGCAGAAGATGACAGTGAAGAAGAGGATGAAATGAGCGATAACGAAAGCGGTTCAAGCGACGGGGATGTTACTCGACATGCCGATCCATGATTGAAAGCTAAGTCATTATATCAATCGTTTCTCCATTTAGCAGCAACGACTAAATTTACATGTTTGGCTTTCCATAGGTTTACTGGCTGTACGATTATATCGAAAATGCCCAACAGAGTTTCAGAGTTTTAGATGTCTCTTAGATTTTCATGGCAATGCTGTGTTAAGTGACTTCAAATGTAAAAACGGTCCAGTAGGGGACACAAAGGAAGTTGACAATATTTTATCAGTTAATGAAATAGACTATACAAATGTGAAACTTTGGTTTGCTTAGCCCATCGTGAAGAAAGGAACATTGTTATATTGTCTCGGAAAATTCAGTATTAATGAGTATCTCATTCTTCTTAGAACTACAGTCTCTTTCAGACATCTCAACTTGGCGATACAACAATTTAAAAGTTACTTGTTTAGTTTTCAAAACTTGATTTAACTTTTGAAAACAT

Coding sequence (CDS)

ATGGGGGCTGAAATGGCAAACAGGAAAGACTCAAAAATTGTAACCATAACCCCCACAGAACCTTTACTCTGCCACGTACACGATTCCTTTTTCCATCATTTACATCTCAATTCTTCCTCCACTTTCAATCCCCAATCCAATTTCATATATATTCTCTCCCTCGCCCTCCCTTTCTTCCCTTCCCAATTTTGCGTTCGCTTCCAACGATTCTCCATTACCCACTGCCTAATTTCTCTGCTTCTTCTGAGATTTTGGAAGTACTGCGCTTTCAAGATGTCTTCTCCAAGCAAAAGGAGAGAAATGGATGTCATGAAATTGATGATGAGTGACTACAACGTGGAGATGATAAACGATGGACTAAACGAATTCAACGTGGAGTTCCACGGTCCCAAAGAAAGCTTATATGAAACTGGTGTTTGGAAAATCCGTGTTGAGCTTCCTGACGCGTATCCATATAAGTCTCCTTCAATTGGCTTTGTGAACAAGATATTCCACCCAAATGTTGATGAACTATCTGGTTCTGTGTGCTTGGATGTGATTAATCAGTCTTGGAGTCCGATGTTCGATCTTTTAAACGTTTTCGAGGTTTTTCTTCCCCAGCTTCTTCTTTATCCCAATCCTTCAGACCCCCTTAACGGCGATGCTGCATCGCTTATGATGAAGGACCGGAAGCAGTACGATGAAAAAGTTAAAGAGTACTGCGAAAAGTATGCAAAGGAGAACACAGCAGAAGATGACAGTGAAGAAGAGGATGAAATGAGCGATAACGAAAGCGGTTCAAGCGACGGGGATGTTACTCGACATGCCGATCCATGA

Protein sequence

MGAEMANRKDSKIVTITPTEPLLCHVHDSFFHHLHLNSSSTFNPQSNFIYILSLALPFFPSQFCVRFQRFSITHCLISLLLLRFWKYCAFKMSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESGSSDGDVTRHADP
Homology
[Close]
BLAST of CmaCh11G001060 vs. ExPASy Swiss-Prot
Match: P42748 (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 SV=2)

HSP 1 Score: 273.5 bits (698), Expect = 2.6e-72
Identity = 130/173 (75.14%), Postives = 152/173 (87.86%), Query Frame = 0 

Query: 92  MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESLYETGVWKIRVELPDAYP 151
           MSSPSKRREMD+MKLMMSDY VE INDG+ EF VEF+GPK+SLY+ GVWKIRVELPDAYP
Sbjct: 1   MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYP 60

Query: 152 YKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPL 211
           YKSPS+GF+ KI+HPNVDELSGSVCLDVINQ+WSPMFDL+NVFE FLPQLLLYPNPSDPL
Sbjct: 61  YKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120

Query: 212 NGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESGSSDGD 265
           NG+AA+LMM+DR  Y+++VKEYCEKYAK     +D   ++E+S+ E GS + D
Sbjct: 121 NGEAAALMMRDRPAYEQRVKEYCEKYAKPGEGSEDKSSDEELSEEEYGSDNED 173

[Close]
BLAST of CmaCh11G001060 vs. ExPASy Swiss-Prot
Match: P42749 (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 SV=2)

HSP 1 Score: 273.1 bits (697), Expect = 3.4e-72
Identity = 132/173 (76.30%), Postives = 154/173 (89.02%), Query Frame = 0 

Query: 92  MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESLYETGVWKIRVELPDAYP 151
           MSSPSKRREMD+MKLMMSDY VEMINDG+ EF VEF GPK+S+YE GVWKIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYP 60

Query: 152 YKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPL 211
           YKSPS+GF+ KI+HPNVDE+SGSVCLDVINQ+WSPMFDL+NVFE FLPQLLLYPNPSDPL
Sbjct: 61  YKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120

Query: 212 NGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESGSSDGD 265
           NG+AA+LMM+DR  Y+++VKEYCEKYAK     ++   +DEMS++E  +SDGD
Sbjct: 121 NGEAAALMMRDRPTYEQRVKEYCEKYAKPRADTEEMSSDDEMSEDEY-ASDGD 172

[Close]
BLAST of CmaCh11G001060 vs. ExPASy Swiss-Prot
Match: P16577 (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.2e-71
Identity = 132/184 (71.74%), Postives = 158/184 (85.87%), Query Frame = 0 

Query: 92  MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESLYETGVWKIRVELPDAYP 151
           MSSPSKRREMD+MKLMMSDY V+MINDG++EF V FHGPK+S+Y+ GVWK+RVEL +AYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYP 60

Query: 152 YKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPL 211
           YKSPSIGF NKI+HPNVDE+SGSVCLDVINQ+WSPMFDL+N+FEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPL 120

Query: 212 NGDAASLMMKDRKQYDEKVKEYCEKYAKE---NTAEDDSEEEDEMSDNES-GSSDGDVTR 271
           NG+AASLMM+D+  Y+ KVKEYCE+YAK    +  E++ E ++E+SD E   S D  +  
Sbjct: 121 NGEAASLMMRDKNAYENKVKEYCERYAKPEDISPEEEEEESDEELSDAEGYDSGDEAIMG 180

[Close]
BLAST of CmaCh11G001060 vs. ExPASy Swiss-Prot
Match: P42750 (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana OX=3702 GN=UBC6 PE=2 SV=2)

HSP 1 Score: 258.5 bits (659), Expect = 8.7e-68
Identity = 127/183 (69.40%), Postives = 150/183 (81.97%), Query Frame = 0 

Query: 92  MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESLYETGVWKIRVELPDAYP 151
           M+SPSKRREMD+MKLMMSDY V+ +ND L  F V FHGP +SLY+ GVWKI+VELP+AYP
Sbjct: 1   MASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYP 60

Query: 152 YKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPL 211
           YKSPS+GFVNKI+HPNVDE SG+VCLDVINQ+WSPMFDL+NVFE FLPQLLLYPNPSDP 
Sbjct: 61  YKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPF 120

Query: 212 NGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESGSSDGD---VTRH 271
           NG+AASL+M+DR  Y+ KVKEYCEKYAK      D +++D MS++ S S D D   +   
Sbjct: 121 NGEAASLLMRDRAAYELKVKEYCEKYAKPEEILSDDDDDDSMSEDGSDSDDDDDDEIVGK 180

[Close]
BLAST of CmaCh11G001060 vs. ExPASy Swiss-Prot
Match: Q9P7R4 (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ubc8 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.4e-57
Identity = 108/173 (62.43%), Postives = 137/173 (79.19%), Query Frame = 0 

Query: 92  MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESLYETGVWKIRVELPDAYP 151
           MSSP +R E DVMKL+MSDY V ++ND + EF V FHGP E+ Y  G+WK+ VELP  YP
Sbjct: 1   MSSPRRRIETDVMKLLMSDYEVTLVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYP 60

Query: 152 YKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPL 211
           +KSPSIGFVN+IFHPN+DELSGSVCLDVINQ+WSPMFD++N+FEVFLPQLL YPN SDPL
Sbjct: 61  WKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPL 120

Query: 212 NGDAASLMMKDRKQYDEKVKEYCEKYAKENTAE---DDSEEEDEMS--DNESG 260
           NG+AA+L++++   Y  KV++Y  +YA +  A+   +DS ++D MS  D ESG
Sbjct: 121 NGEAAALLLREPNTYYAKVRDYIARYANKEDADITLNDSSDDDTMSSIDTESG 173

[Close]
BLAST of CmaCh11G001060 vs. TAIR 10
Match: AT5G41340.1 (ubiquitin conjugating enzyme 4 )

HSP 1 Score: 273.5 bits (698), Expect = 1.9e-73
Identity = 130/173 (75.14%), Postives = 152/173 (87.86%), Query Frame = 0 

Query: 92  MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESLYETGVWKIRVELPDAYP 151
           MSSPSKRREMD+MKLMMSDY VE INDG+ EF VEF+GPK+SLY+ GVWKIRVELPDAYP
Sbjct: 1   MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYP 60

Query: 152 YKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPL 211
           YKSPS+GF+ KI+HPNVDELSGSVCLDVINQ+WSPMFDL+NVFE FLPQLLLYPNPSDPL
Sbjct: 61  YKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120

Query: 212 NGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESGSSDGD 265
           NG+AA+LMM+DR  Y+++VKEYCEKYAK     +D   ++E+S+ E GS + D
Sbjct: 121 NGEAAALMMRDRPAYEQRVKEYCEKYAKPGEGSEDKSSDEELSEEEYGSDNED 173

[Close]
BLAST of CmaCh11G001060 vs. TAIR 10
Match: AT1G63800.1 (ubiquitin-conjugating enzyme 5 )

HSP 1 Score: 273.1 bits (697), Expect = 2.4e-73
Identity = 132/173 (76.30%), Postives = 154/173 (89.02%), Query Frame = 0 

Query: 92  MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESLYETGVWKIRVELPDAYP 151
           MSSPSKRREMD+MKLMMSDY VEMINDG+ EF VEF GPK+S+YE GVWKIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYP 60

Query: 152 YKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPL 211
           YKSPS+GF+ KI+HPNVDE+SGSVCLDVINQ+WSPMFDL+NVFE FLPQLLLYPNPSDPL
Sbjct: 61  YKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120

Query: 212 NGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESGSSDGD 265
           NG+AA+LMM+DR  Y+++VKEYCEKYAK     ++   +DEMS++E  +SDGD
Sbjct: 121 NGEAAALMMRDRPTYEQRVKEYCEKYAKPRADTEEMSSDDEMSEDEY-ASDGD 172

[Close]
BLAST of CmaCh11G001060 vs. TAIR 10
Match: AT2G46030.1 (ubiquitin-conjugating enzyme 6 )

HSP 1 Score: 258.5 bits (659), Expect = 6.2e-69
Identity = 127/183 (69.40%), Postives = 150/183 (81.97%), Query Frame = 0 

Query: 92  MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESLYETGVWKIRVELPDAYP 151
           M+SPSKRREMD+MKLMMSDY V+ +ND L  F V FHGP +SLY+ GVWKI+VELP+AYP
Sbjct: 1   MASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYP 60

Query: 152 YKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPL 211
           YKSPS+GFVNKI+HPNVDE SG+VCLDVINQ+WSPMFDL+NVFE FLPQLLLYPNPSDP 
Sbjct: 61  YKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPF 120

Query: 212 NGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESGSSDGD---VTRH 271
           NG+AASL+M+DR  Y+ KVKEYCEKYAK      D +++D MS++ S S D D   +   
Sbjct: 121 NGEAASLLMRDRAAYELKVKEYCEKYAKPEEILSDDDDDDSMSEDGSDSDDDDDDEIVGK 180

[Close]
BLAST of CmaCh11G001060 vs. TAIR 10
Match: AT1G78870.2 (ubiquitin-conjugating enzyme 35 )

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-19
Identity = 46/121 (38.02%), Postives = 70/121 (57.85%), Query Frame = 0 

Query: 118 DGLNEFNVEFHGPKESLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCL 177
           D +  FNV   GP +S YE GV+K+ + LP+ YP  +P + F+ KI+HPN+D+L G +CL
Sbjct: 32  DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICL 91

Query: 178 DVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKY 237
           D++   WSP   +  V  + +  LL  PNP DPL+ + A     +  +  +  KE+   Y
Sbjct: 92  DILKDKWSPALQIRTVL-LSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRLY 150

Query: 238 A 239
           A
Sbjct: 152 A 150

[Close]
BLAST of CmaCh11G001060 vs. TAIR 10
Match: AT5G62540.1 (ubiquitin-conjugating enzyme 3 )

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-19
Identity = 48/149 (32.21%), Postives = 87/149 (58.39%), Query Frame = 0 

Query: 92  MSSPSKRREMDVMKLMMSDYNVEMI----NDGLNEFNVEFHGPKESLYETGVWKIRVELP 151
           M++P+K+R M   K +  D  V +     ++ +  +N    GP+++ ++ G +K+ +   
Sbjct: 1   MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60

Query: 152 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNP 211
           + YP K P + FV+++FHPN+    GS+CLD++   WSP++D+  V    +  LL  PNP
Sbjct: 61  EDYPNKPPIVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAVL-TSIQSLLCDPNP 120

Query: 212 SDPLNGDAASLMMKDRKQYDEKVKEYCEK 237
             P N +AA L  +++++Y+ KV E  E+
Sbjct: 121 DSPANAEAARLFSENKREYNRKVIEIVEQ 147

The following BLAST results are available for this feature:
BLAST of CmaCh11G001060 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P427482.6e-7275.14Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 S... [more]
P427493.4e-7276.30Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 S... [more]
P165772.2e-7171.74Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1... [more]
P427508.7e-6869.40Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana OX=3702 GN=UBC6 PE=2 S... [more]
Q9P7R42.4e-5762.43Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATC... [more]
BLAST of CmaCh11G001060 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G41340.11.9e-7375.14ubiquitin conjugating enzyme 4 [more]
AT1G63800.12.4e-7376.30ubiquitin-conjugating enzyme 5 [more]
AT2G46030.16.2e-6969.40ubiquitin-conjugating enzyme 6 [more]
AT1G78870.21.2e-1938.02ubiquitin-conjugating enzyme 35 [more]
AT5G62540.11.2e-1932.21ubiquitin-conjugating enzyme 3 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 95..239
e-value: 1.1E-49
score: 181.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..271
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 94..271
NoneNo IPR availablePANTHERPTHR24068:SF332UBIQUITIN-CONJUGATING ENZYME E2-23 KDA-LIKEcoord: 94..271
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 87..253
e-value: 1.1E-48
score: 166.9
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 95..240
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 102..233
e-value: 8.1E-39
score: 132.5
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 91..239
score: 41.060726
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 98..234
e-value: 3.86992E-49
score: 157.364
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 164..180

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G001060.1CmaCh11G001060.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0051171 regulation of nitrogen compound metabolic process
biological_process GO:0080090 regulation of primary metabolic process
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0061631 ubiquitin conjugating enzyme activity