CmaCh11G000970 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G000970
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein KINESIN LIGHT CHAIN-RELATED 3-like
Location	Cma_Chr11: 522626 .. 528994 (-)
RNA-Seq Expression	CmaCh11G000970
Synteny	CmaCh11G000970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGGAATTGTCATGGATGAAATTAATGAAGAAAGGGCTGTGAATAGACATAACGGTGCTTCAATTCATATGGAAGAGTCGTATGGAAACAAGTCGCCTAGGAGCGGGTTGAGTGTTCAGAGCCATGGAAGTGTTAATGTTGATTTCCATGTTGATGGCTTGGTTGACACCTCTATTGAGAAGCTTTATGAAAATGTCTATGATATGCAAAGTTCAGATCAGTCTCCTTCAAGGCGTAGCTTTGGATCAGATGGTGGGGAATCCAGGATTGATTCCGAACTGAATCATCTTGTAGGAGGAGAGATGAGGGAGGTAGAGATAATAAAGGAGGAAGAAGACATTGTAGAGAGGACTGAAAATGATTTTCCCAGTGATTCTGTGAAAGATTTACCATCTGTAGAGATTAAGAGCACAGAAAATTCCCAACCTGGAAGCTCAAAACGCCTTTCTTCTGGAAAAAAAGCTTCTCACTTGCAATTGAATCACGAGACATCTCCAAAATCAAGTTCCAGTGTCAAGGATTTGTCTGATAAGTCCCCTATTAGCAGAAAGAATGAAAAGAGTTCGAAAAAAACTAGTCCGGTTGCTTCTAACTCGAAGAAACAAAAAGATTCACCTTTGAGAGGCTCGAAAATACTTAATGGAACCGAGGATTTCAATGAATCAATGATGGATAATCCTGATCTAGGACCCTATCTGCTTAAGCAAGCTAGGAGTTTAGTTTCTTCAGGGGAGAATCTGCAGAAAGCTCTCTTATTAGCTCTTCGTGCTGCAAAAGCTTTTGAACTATCTGCAAATGGGAAACCGAGCTTGGAACTCGTTATGTGTTTGCACGTTACAGCAGCTATTTACTGTAGTCTAGGCCAGTACAGTGAGGCAATTCCTCTGTTGGAGCATTCCATTGAGATTCCTGCCATCAAGGAAGGCCAGGAACATGCGCTGGCCAAATTTGCAGGTCACATGCAGCTAGGTGATACCTATGCAATGCTGGGCCTGCTGGAAAATTCTCTAATCTGTTATACAACTGGGTTAGAGGTGCAGAAACAAGTCCTTGGAGAAGCAGACCCCAGAGTTGGTGAGACCTATAGGTATTTAGCTGAAGCCCATGTTCAAGCTTTGCAATTTGATGAGGCTGAGAAGTTTTGTCAAATGGCTCTCAATATACACAAAAAGAACGTCGGTCCTGCTTCTCTTGAGGAGGCTGCGGATAGGAGGCTTATGGGTCTCATATGTGAAACAAAAGGAGATCATGAAGCTGCGCTCGAGCATCTAGTTTTAGCCAGCATGGCTATGGTGGCGAATGGCCAAGAGACTGATGTGGCTGCAGTTGATTGCAGTATTGGAGATTCGTACTTATCCCTGTCCCGTTACGACGAGGCTGTTTTTGCTTACCAGAAAGCTCTCACTGTTTACAAGACCACCAAGGGAGAAAACCATCCAGCAGTTGGTTCGGTATATGTTCGTCTTGCTGATTTATACAACAAAACTGGAAAAACAAGGGAGTCGGTATCGTACTGTGAAAACGCCCTTCGAATTTATGAAAAGCCTATCTCTGGGATTCCTCCTGAGGAGATTGCTAGTGGTCTTACTAATGTTGCTGCTATTTATGAATCAATGAATGAAGCTGAGCAAGCGGTCAAATTATTGCACAAGGCACTGAAGATATATAGTAATGCCCCTGGACAGCAAAGCACGATTGCTGGAATTGAAGCCCAGATGGGTGTGTTGTATTATATGTTAGGGAACTATTCTGAATCTTATGACTCCTTCAAGAACGCTATTCCAAAGCTTCGCAACAGCGGAGAGAAAAAATCTGCTTTCTTTGGGATAGCTCTTAATCAAATGGGGCTTGCTTGTGTTCAGAAATATGCTATTAACGAAGCTGTGGAGCTATTTGAAGAAGCCAAGAGCATACTAGAAAAAGAATACGGGCCTTATCATCCCGACACGCTCGGAGTCTATAGCAACCTTGCTGGAGCATATGATGCGATTGGCAGGTAATGTAACCATCCTTCTATCACCATACAATGATCAATACTGTAATTGAATTTGTCCTTTTCCCATAATCTCTGTCTGGAACTATGAAAATCTCCATAACCAAGTCCTTTTCGTTATTGTGCCACCGATATTCAGTATTTTCTGTGAGATCCCAAATCGGTTGGAGAGGGGAACGAAACATTTCTTGTAAGGATGTGAAAGCCTCTCTTCAGTGGACACGTTTTAAAACTTTGAGGGGAAAACTCAAAGAGGACAATATTTGCTAGCGGTGAGTTTGGGTTGGTACAAATGGTATCAGAACTAGACACCGGGCGGTGTGCCAACGAGGACGTTGGGCCTCCGAGGAGGGTGGATTGTGAGATCCCATATCGGTTGGACAGGGGAACAAAGCATTCCTTAGAAGGGTGGGGAACCTCTCCCTAGTGACGCATTTTAAAACCTTGAGGGAAAATTCGGAAGGGAAAGCCCAAAGAAGACAATATCTACTAACGGTGGGTTTGGGCGATTACATTTTCATTAAGAAATGTTTAGAAATCTAGTCCTTTGAGCAACAGATGATGCAACTCCACACTTTTTTCATACATTGATCAGTTCTCCTCCCATGACATTATACAGGTTGGATGATGCAATTGAAATGTTGGAGTATGTTGTTGGCACGAGAGAGGAAAAACTCGGGACTGCCAATCCTGATGTCGACGATGAGAAGAGGAGGTTGTCTGAATTGTTGAAAGAAGCTGGTAGAGTCCGGAGCCGAAAGGCGAGATCGCTCGAGACTCTTCTTGATGCCAATACTCATCCTGTAAACAGTAAAGGTATTAAGGTTTGATAAAAGATTATACACATCACGGGAGCAACATCGTTGCCGAGATTAGATCCGATTCAAAATCATGGCTAATTATGGTCGAGTAGATACCTGATTCTTGAGGTTGTTCGAGTGCTAGAATGTGGCGTTTCATTTTGTTTGCATTGTCGATTGCTTAATCTTGTATTGGTGTATGAAGTAATATTGTTCTGTATATTTTTACACGGAAGTCGTGACATTATGATTTTGTATATCACATTCTTCTGGGGTTATAAGATTGTTTGATACAGGTTTTTAATGAGAACTCCGAGGATGATGGTCCTGCGTTTGTACCATAAATAACGAGACGTACATCTTAACTAGTTAAACTATATTTATGTTAAAATTTGATAACATTCGTTTATTATTGGAGCATATATATAATATGTCCCGTAGCTCTGGTGAAAAGGGAAGGCCTAGCAGATCGTGTGTCTAATGGTGCAGGATTCTTCGAAAAAGTGCGGGTTGACTCGGAGACCTGGGACTTTGGCTTAGCGACGAATGAAGGGGAGCTTAAAGAGTTTTCTCCCTCAGTGGTTTATGTAGTGGTTGGACGGTCAGAACTTAGTAGTTAACATTCCATAAGCGATTTGTAGAGTTTAATAAGAATTTTTGCCTAGAATCAAATATTGAGTAATAAATGCAAATTAATAATGTATAATAAGCAGTTAAAATCTAAAAATACAATTAATTTAAAAAAAAAAAGTTAAACTCTAGACTAGACAAATGTTCATACTTTTACTTTTTTGTTCAATTAACAAAAATAAAAAGGTTTTTTTTTTTTTAAATTCACAAATCAAAATAAAATTGATCCAACAATGAAAAATAAATATCTTTTTTCGAATATATTAATTACCCTCGAAACCATTCGGTCTGCCTCGTTCGCGCGTATTACTTCTCTTTCGTGTTCATTGCTCTCGCCCACTAGATAGGTTTCTTTCTTCCACTCACAATTCCTCCTGTCGCTGACTGTTACAACATCTCGTTTGCTTCGTGGAAGGGATTGTACCTGTAACTATGGTTGAAAAATCTTCTAGTTCGTCATCTATTCTGGTTGATCAGCCAGTTGTAAGTTCGAAATCAATCTCATTGTTCGTTTTCCCTCTTCTTTTTGCCTGTTCGATGTTCTGCAGCTTGTAAATGAATTGGCGTATTCGTTTATCTTTATTGGAATTTCGATTGCTTAGGTTCCAGGAGATGTGGTCCTCGACCTCTCAAACATGACCAACGAAACCATCAAGCTTGGAGGCGGTCTTCGACAGGTGTCTGTTAGGGTTTTATTGTTTTCAATGTTTGTGCATCTCCATATATGTCTCTGATCCCGTTTTAGCAACCATTAATTTCCTCAACGATTGTAGATTTAGTTTTCATAAACTTTTGAGCGGACAATCGAATGTACTTCAAATGTCGTTTAGTTTTCGACAGTCAAAGTTCGCATTGTTACATTTGCAGTCGTGTTGTTTACGGGATTGTTTACCTTCATTTTTTTTCTTTCTAAAAATAATCTTTCAGGACCATGATGCTATTTCTGTCGCCAAAGTTGGAAAATTAAGGTTCTCAAAACCAAACAAATATTGGGTTGAAAGCTCGCAGAAAAGGGTCAGTAGCACCGACTTTCTTCAATCGATTATGGGGATCCTTATATTGTTTGTTGTTTCAGTTAACTTTCGTATTGTGAACTTCAACCGCTAGTTTCGGTGGGTTTCTTCAATTGAAACGACTATCAATATTATTCCCGTGTTTAATTTTAATAAAATGTGCTATTTTCCAGTATGTGCCATGTGCAGAAGATTGCGTACTTGGAATCGTGGTTGACTCTAGATCCGATGTAAGTGCTTCTTTATTATTGTTTGAATTAAATGTATTTGTTCAATTACGAAATAACTGGCTACTACTCTCTCTGATTGATTTTCTTGGATGGTTTGACCGGTATCCATGTCTAATGAGTCTTAGGAAACCAATGATGATTTTTCTGACTACCTTATTAATTATCATAGTATACTTTTTTTTTACTTTGTATGTATGCAGAATTTTCTTGTTGACATAAAAGGTCCTTCATTGGCCTTTCTTCCTGTTCTTGCATTTGAAGGAGGTACAAGACGAAACATTCCCAAGTTTGAGGTGTGTATAAACTTTTGTGCACATATTTTTGTTATATTAATCATACGACCTATAGTTGTTCCTGTCTTCCTTCTATAGAAGCTTTTATGCGTTGTCAGTTCATTTATTATCCCGAGAGGTTATGCTTATCTGTTTCTTCTTTCATCTTTTTTGGTGGGGATGGTTAAGAAACATCTTTTGCATATCAGTAAAGTTGTATTCTCTTACCCTTTTGAATTTGGTTTATTTTTCTTTGCAATCTACTTACCTTAACTCGGGGATATGTATCTATCATAAGTGTATTCAATTGAAGTTACCAGTTTCACTTTTTTATCCTCCTTAAACATGCCTTCTTGATTCCCTGTCTTGTAGATGGGTGCCCTTCTTTATGTGCGGGTGGTGAAGGCAAACCCAGGTATGAATCCCGAGCTGGCATGCACTGATGGTTAGTTAAATCCTCCCTCTCTCAGCATCCAATAAATCGTTTGAAGGTTAAAACAGTCGATCGATGTAATATAGTGATGTTGCTGTGAACACATCCTCTCAAGAGGGGTGGGCAGGGCCTGCATACTTTATGCAAGTTCATGTTTCTCTCCTCAGTTTTTGGTTGATGTGATTTACATGGAATTTGCCTCATGTGAGTATCATTTTTCTTGATATAGCTAGTGGGAAAGCAGCTGGATTTGGCCACCTAAAGGATGGTTACATCTTTGACTGTTCAACTGGCTTATCAAGAATGTAATCTAAATTGCTTTTCTTAATTGCTCTTTCCGTCCCTGTTAAGTCAGTCTTCTAATCATTCATTTACATTGTTGATTTGGTCCTCTCTTCTAGGCTTCTAAGCTCGCCAACATGTCCTGTTCTTGAATCTCTTGGGAAGAAGCTTTCATTCGAGACGGCAGTTGGTATAAATGGCCGAGTTTGGGTATGTTCCTTCAATCCTTAGATTTTTGTTGCTAGACATTGGTCGTTACTCTGTATAATTCTCTTCCCATGCTGTCTTCTAGCACATATTAACCTTATATTTTCATCAACAAAAATTTTCTTTATTTGAAATATATATTTCTTTGTGAGTTCTAACACATGGGGTCGATAATATATATTTTAATCAATTGAACTATATTTATATTGGCCTTACACGAGAGTCATATTAATAATATTAATATGTTGTTGAAATTAGTCTTCACTCTTGGCATTGCCCTTCACTTTTACTGTTCTTTGAAATTTGAAAATGTAATTTCTTGTATCAATTTTACTAATAAATAAACTTTCTTATCTTGCTCATCTCTACTTTTCAGGTCAATGCAGATTCCCCGTCCACAACCATTGTTGTTTCTAATGCAATAATGAACTCAGAAACTCTGAGTGGGGTCCAACAGAGAATCATGGTGGACAAGCTCCTAAATAATTTAAAGCTATCAAGTTAA

mRNA sequence

ATGCCGGGAATTGTCATGGATGAAATTAATGAAGAAAGGGCTGTGAATAGACATAACGGTGCTTCAATTCATATGGAAGAGTCGTATGGAAACAAGTCGCCTAGGAGCGGGTTGAGTGTTCAGAGCCATGGAAGTGTTAATGTTGATTTCCATGTTGATGGCTTGGTTGACACCTCTATTGAGAAGCTTTATGAAAATGTCTATGATATGCAAAGTTCAGATCAGTCTCCTTCAAGGCGTAGCTTTGGATCAGATGGTGGGGAATCCAGGATTGATTCCGAACTGAATCATCTTGTAGGAGGAGAGATGAGGGAGGTAGAGATAATAAAGGAGGAAGAAGACATTGTAGAGAGGACTGAAAATGATTTTCCCAGTGATTCTGTGAAAGATTTACCATCTGTAGAGATTAAGAGCACAGAAAATTCCCAACCTGGAAGCTCAAAACGCCTTTCTTCTGGAAAAAAAGCTTCTCACTTGCAATTGAATCACGAGACATCTCCAAAATCAAGTTCCAGTGTCAAGGATTTGTCTGATAAGTCCCCTATTAGCAGAAAGAATGAAAAGAGTTCGAAAAAAACTAGTCCGGTTGCTTCTAACTCGAAGAAACAAAAAGATTCACCTTTGAGAGGCTCGAAAATACTTAATGGAACCGAGGATTTCAATGAATCAATGATGGATAATCCTGATCTAGGACCCTATCTGCTTAAGCAAGCTAGGAGTTTAGTTTCTTCAGGGGAGAATCTGCAGAAAGCTCTCTTATTAGCTCTTCGTGCTGCAAAAGCTTTTGAACTATCTGCAAATGGGAAACCGAGCTTGGAACTCGTTATGTGTTTGCACGTTACAGCAGCTATTTACTGTAGTCTAGGCCAGTACAGTGAGGCAATTCCTCTGTTGGAGCATTCCATTGAGATTCCTGCCATCAAGGAAGGCCAGGAACATGCGCTGGCCAAATTTGCAGGTCACATGCAGCTAGGTGATACCTATGCAATGCTGGGCCTGCTGGAAAATTCTCTAATCTGTTATACAACTGGGTTAGAGGTGCAGAAACAAGTCCTTGGAGAAGCAGACCCCAGAGTTGGTGAGACCTATAGGTATTTAGCTGAAGCCCATGTTCAAGCTTTGCAATTTGATGAGGCTGAGAAGTTTTGTCAAATGGCTCTCAATATACACAAAAAGAACGTCGGTCCTGCTTCTCTTGAGGAGGCTGCGGATAGGAGGCTTATGGGTCTCATATGTGAAACAAAAGGAGATCATGAAGCTGCGCTCGAGCATCTAGTTTTAGCCAGCATGGCTATGGTGGCGAATGGCCAAGAGACTGATGTGGCTGCAGTTGATTGCAGTATTGGAGATTCGTACTTATCCCTGTCCCGTTACGACGAGGCTGTTTTTGCTTACCAGAAAGCTCTCACTGTTTACAAGACCACCAAGGGAGAAAACCATCCAGCAGTTGGTTCGGTATATGTTCGTCTTGCTGATTTATACAACAAAACTGGAAAAACAAGGGAGTCGGTATCGTACTGTGAAAACGCCCTTCGAATTTATGAAAAGCCTATCTCTGGGATTCCTCCTGAGGAGATTGCTAGTGGTCTTACTAATGTTGCTGCTATTTATGAATCAATGAATGAAGCTGAGCAAGCGGTCAAATTATTGCACAAGGCACTGAAGATATATAGTAATGCCCCTGGACAGCAAAGCACGATTGCTGGAATTGAAGCCCAGATGGGTGTGTTGTATTATATGTTAGGGAACTATTCTGAATCTTATGACTCCTTCAAGAACGCTATTCCAAAGCTTCGCAACAGCGGAGAGAAAAAATCTGCTTTCTTTGGGATAGCTCTTAATCAAATGGGGCTTGCTTGTGTTCAGAAATATGCTATTAACGAAGCTGTGGAGCTATTTGAAGAAGCCAAGAGCATACTAGAAAAAGAATACGGGCCTTATCATCCCGACACGCTCGGAGTCTATAGCAACCTTGCTGGAGCATATGATGCGATTGGCAGGTTGGATGATGCAATTGAAATGTTGGAGTATGTTGTTGGCACGAGAGAGGAAAAACTCGGGACTGCCAATCCTGATGTCGACGATGAGAAGAGGAGGTTGTCTGAATTGTTGAAAGAAGCTGGTAGAGTCCGGAGCCGAAAGGCGAGATCGCTCGAGACTCTTCTTGATGCCAATACTCATCCTGTAAACAGTAAAGGGATTGTACCTGTAACTATGGTTGAAAAATCTTCTAGTTCGTCATCTATTCTGGTTGATCAGCCAGTTGTTCCAGGAGATGTGGTCCTCGACCTCTCAAACATGACCAACGAAACCATCAAGCTTGGAGGCGGTCTTCGACAGGACCATGATGCTATTTCTGTCGCCAAAGTTGGAAAATTAAGGTTCTCAAAACCAAACAAATATTGGGTTGAAAGCTCGCAGAAAAGGTATGTGCCATGTGCAGAAGATTGCGTACTTGGAATCGTGGTTGACTCTAGATCCGATAATTTTCTTGTTGACATAAAAGGTCCTTCATTGGCCTTTCTTCCTGTTCTTGCATTTGAAGGAGGTACAAGACGAAACATTCCCAAGTTTGAGATGGGTGCCCTTCTTTATGTGCGGGTGGTGAAGGCAAACCCAGGTATGAATCCCGAGCTGGCATGCACTGATGCTAGTGGGAAAGCAGCTGGATTTGGCCACCTAAAGGATGGTTACATCTTTGACTGTTCAACTGGCTTATCAAGAATGCTTCTAAGCTCGCCAACATGTCCTGTTCTTGAATCTCTTGGGAAGAAGCTTTCATTCGAGACGGCAGTTGGTATAAATGGCCGAGTTTGGGTCAATGCAGATTCCCCGTCCACAACCATTGTTGTTTCTAATGCAATAATGAACTCAGAAACTCTGAGTGGGGTCCAACAGAGAATCATGGTGGACAAGCTCCTAAATAATTTAAAGCTATCAAGTTAA

Coding sequence (CDS)

ATGCCGGGAATTGTCATGGATGAAATTAATGAAGAAAGGGCTGTGAATAGACATAACGGTGCTTCAATTCATATGGAAGAGTCGTATGGAAACAAGTCGCCTAGGAGCGGGTTGAGTGTTCAGAGCCATGGAAGTGTTAATGTTGATTTCCATGTTGATGGCTTGGTTGACACCTCTATTGAGAAGCTTTATGAAAATGTCTATGATATGCAAAGTTCAGATCAGTCTCCTTCAAGGCGTAGCTTTGGATCAGATGGTGGGGAATCCAGGATTGATTCCGAACTGAATCATCTTGTAGGAGGAGAGATGAGGGAGGTAGAGATAATAAAGGAGGAAGAAGACATTGTAGAGAGGACTGAAAATGATTTTCCCAGTGATTCTGTGAAAGATTTACCATCTGTAGAGATTAAGAGCACAGAAAATTCCCAACCTGGAAGCTCAAAACGCCTTTCTTCTGGAAAAAAAGCTTCTCACTTGCAATTGAATCACGAGACATCTCCAAAATCAAGTTCCAGTGTCAAGGATTTGTCTGATAAGTCCCCTATTAGCAGAAAGAATGAAAAGAGTTCGAAAAAAACTAGTCCGGTTGCTTCTAACTCGAAGAAACAAAAAGATTCACCTTTGAGAGGCTCGAAAATACTTAATGGAACCGAGGATTTCAATGAATCAATGATGGATAATCCTGATCTAGGACCCTATCTGCTTAAGCAAGCTAGGAGTTTAGTTTCTTCAGGGGAGAATCTGCAGAAAGCTCTCTTATTAGCTCTTCGTGCTGCAAAAGCTTTTGAACTATCTGCAAATGGGAAACCGAGCTTGGAACTCGTTATGTGTTTGCACGTTACAGCAGCTATTTACTGTAGTCTAGGCCAGTACAGTGAGGCAATTCCTCTGTTGGAGCATTCCATTGAGATTCCTGCCATCAAGGAAGGCCAGGAACATGCGCTGGCCAAATTTGCAGGTCACATGCAGCTAGGTGATACCTATGCAATGCTGGGCCTGCTGGAAAATTCTCTAATCTGTTATACAACTGGGTTAGAGGTGCAGAAACAAGTCCTTGGAGAAGCAGACCCCAGAGTTGGTGAGACCTATAGGTATTTAGCTGAAGCCCATGTTCAAGCTTTGCAATTTGATGAGGCTGAGAAGTTTTGTCAAATGGCTCTCAATATACACAAAAAGAACGTCGGTCCTGCTTCTCTTGAGGAGGCTGCGGATAGGAGGCTTATGGGTCTCATATGTGAAACAAAAGGAGATCATGAAGCTGCGCTCGAGCATCTAGTTTTAGCCAGCATGGCTATGGTGGCGAATGGCCAAGAGACTGATGTGGCTGCAGTTGATTGCAGTATTGGAGATTCGTACTTATCCCTGTCCCGTTACGACGAGGCTGTTTTTGCTTACCAGAAAGCTCTCACTGTTTACAAGACCACCAAGGGAGAAAACCATCCAGCAGTTGGTTCGGTATATGTTCGTCTTGCTGATTTATACAACAAAACTGGAAAAACAAGGGAGTCGGTATCGTACTGTGAAAACGCCCTTCGAATTTATGAAAAGCCTATCTCTGGGATTCCTCCTGAGGAGATTGCTAGTGGTCTTACTAATGTTGCTGCTATTTATGAATCAATGAATGAAGCTGAGCAAGCGGTCAAATTATTGCACAAGGCACTGAAGATATATAGTAATGCCCCTGGACAGCAAAGCACGATTGCTGGAATTGAAGCCCAGATGGGTGTGTTGTATTATATGTTAGGGAACTATTCTGAATCTTATGACTCCTTCAAGAACGCTATTCCAAAGCTTCGCAACAGCGGAGAGAAAAAATCTGCTTTCTTTGGGATAGCTCTTAATCAAATGGGGCTTGCTTGTGTTCAGAAATATGCTATTAACGAAGCTGTGGAGCTATTTGAAGAAGCCAAGAGCATACTAGAAAAAGAATACGGGCCTTATCATCCCGACACGCTCGGAGTCTATAGCAACCTTGCTGGAGCATATGATGCGATTGGCAGGTTGGATGATGCAATTGAAATGTTGGAGTATGTTGTTGGCACGAGAGAGGAAAAACTCGGGACTGCCAATCCTGATGTCGACGATGAGAAGAGGAGGTTGTCTGAATTGTTGAAAGAAGCTGGTAGAGTCCGGAGCCGAAAGGCGAGATCGCTCGAGACTCTTCTTGATGCCAATACTCATCCTGTAAACAGTAAAGGGATTGTACCTGTAACTATGGTTGAAAAATCTTCTAGTTCGTCATCTATTCTGGTTGATCAGCCAGTTGTTCCAGGAGATGTGGTCCTCGACCTCTCAAACATGACCAACGAAACCATCAAGCTTGGAGGCGGTCTTCGACAGGACCATGATGCTATTTCTGTCGCCAAAGTTGGAAAATTAAGGTTCTCAAAACCAAACAAATATTGGGTTGAAAGCTCGCAGAAAAGGTATGTGCCATGTGCAGAAGATTGCGTACTTGGAATCGTGGTTGACTCTAGATCCGATAATTTTCTTGTTGACATAAAAGGTCCTTCATTGGCCTTTCTTCCTGTTCTTGCATTTGAAGGAGGTACAAGACGAAACATTCCCAAGTTTGAGATGGGTGCCCTTCTTTATGTGCGGGTGGTGAAGGCAAACCCAGGTATGAATCCCGAGCTGGCATGCACTGATGCTAGTGGGAAAGCAGCTGGATTTGGCCACCTAAAGGATGGTTACATCTTTGACTGTTCAACTGGCTTATCAAGAATGCTTCTAAGCTCGCCAACATGTCCTGTTCTTGAATCTCTTGGGAAGAAGCTTTCATTCGAGACGGCAGTTGGTATAAATGGCCGAGTTTGGGTCAATGCAGATTCCCCGTCCACAACCATTGTTGTTTCTAATGCAATAATGAACTCAGAAACTCTGAGTGGGGTCCAACAGAGAATCATGGTGGACAAGCTCCTAAATAATTTAAAGCTATCAAGTTAA

Protein sequence

MPGIVMDEINEERAVNRHNGASIHMEESYGNKSPRSGLSVQSHGSVNVDFHVDGLVDTSIEKLYENVYDMQSSDQSPSRRSFGSDGGESRIDSELNHLVGGEMREVEIIKEEEDIVERTENDFPSDSVKDLPSVEIKSTENSQPGSSKRLSSGKKASHLQLNHETSPKSSSSVKDLSDKSPISRKNEKSSKKTSPVASNSKKQKDSPLRGSKILNGTEDFNESMMDNPDLGPYLLKQARSLVSSGENLQKALLLALRAAKAFELSANGKPSLELVMCLHVTAAIYCSLGQYSEAIPLLEHSIEIPAIKEGQEHALAKFAGHMQLGDTYAMLGLLENSLICYTTGLEVQKQVLGEADPRVGETYRYLAEAHVQALQFDEAEKFCQMALNIHKKNVGPASLEEAADRRLMGLICETKGDHEAALEHLVLASMAMVANGQETDVAAVDCSIGDSYLSLSRYDEAVFAYQKALTVYKTTKGENHPAVGSVYVRLADLYNKTGKTRESVSYCENALRIYEKPISGIPPEEIASGLTNVAAIYESMNEAEQAVKLLHKALKIYSNAPGQQSTIAGIEAQMGVLYYMLGNYSESYDSFKNAIPKLRNSGEKKSAFFGIALNQMGLACVQKYAINEAVELFEEAKSILEKEYGPYHPDTLGVYSNLAGAYDAIGRLDDAIEMLEYVVGTREEKLGTANPDVDDEKRRLSELLKEAGRVRSRKARSLETLLDANTHPVNSKGIVPVTMVEKSSSSSSILVDQPVVPGDVVLDLSNMTNETIKLGGGLRQDHDAISVAKVGKLRFSKPNKYWVESSQKRYVPCAEDCVLGIVVDSRSDNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEMGALLYVRVVKANPGMNPELACTDASGKAAGFGHLKDGYIFDCSTGLSRMLLSSPTCPVLESLGKKLSFETAVGINGRVWVNADSPSTTIVVSNAIMNSETLSGVQQRIMVDKLLNNLKLSS

Homology

[Close]

BLAST of CmaCh11G000970 vs. ExPASy Swiss-Prot
Match: F4HSX9 (Protein KINESIN LIGHT CHAIN-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=KLCR3 PE=2 SV=1)

HSP 1 Score: 759.6 bits (1960), Expect = 4.4e-218
Identity = 416/684 (60.82%), Postives = 519/684 (75.88%), Query Frame = 0


Query: 44  GSVNVDF-HVDGLVDTSIEKLYENVYDMQSSDQSPSRRSFGSDGGESRIDSELNHLVGGE 103
           GSVN    + D + DT+IE+L +N+ ++QSS+QSPSR+SFGS G ES+IDS+L HL  GE
Sbjct: 4   GSVNESHSNADQMFDTTIEELCKNLCELQSSNQSPSRQSFGSYGDESKIDSDLQHLALGE 63

Query: 104 MREVEIIKEEEDIVERTENDFPSDSVKDLPSVEIKSTENSQPGSSKRLSSGKKASHLQLN 163
           MR+++I+++E D           D V      ++KS  ++                  L+
Sbjct: 64  MRDIDILEDEGD----------EDEVAKPEEFDVKSNSSN------------------LD 123

Query: 164 HETSPKSSSSVKDLSDKSPISRKNEKSSKKTSPVASNSKKQKDSPLRGSKILNGTEDFNE 223
            E  P+               +  +K+  K++      +K+K   + G+K+ NG E   E
Sbjct: 124 LEVMPRDME-----------KQTGKKNVTKSNVGVGGMRKKK---VGGTKLQNGNE---E 183

Query: 224 SMMDNPDLGPYLLKQARSLVSSGENLQKALLLALRAAKAFELSA-NGKPSLELVMCLHVT 283
              +N +L  +LL QAR+LVSSG++  KAL L  RAAK FE SA NGKP LE +MCLHVT
Sbjct: 184 PSSENVELARFLLNQARNLVSSGDSTHKALELTHRAAKLFEASAENGKPCLEWIMCLHVT 243

Query: 284 AAIYCSLGQYSEAIPLLEHSIEIPAIKEGQEHALAKFAGHMQLGDTYAMLGLLENSLICY 343
           AA++C L +Y+EAIP+L+ S+EIP ++EG+EHALAKFAG MQLGDTYAM+G LE+S+ CY
Sbjct: 244 AAVHCKLKEYNEAIPVLQRSVEIPVVEEGEEHALAKFAGLMQLGDTYAMVGQLESSISCY 303

Query: 344 TTGLEVQKQVLGEADPRVGETYRYLAEAHVQALQFDEAEKFCQMALNIHKKNVGPASLEE 403
           T GL +QK+VLGE DPRVGET RYLAEA VQAL+FDEA++ C+ AL+IH+++  P S+ E
Sbjct: 304 TEGLNIQKKVLGENDPRVGETCRYLAEALVQALRFDEAQQVCETALSIHRESGLPGSIAE 363

Query: 404 AADRRLMGLICETKGDHEAALEHLVLASMAMVANGQETDVAAVDCSIGDSYLSLSRYDEA 463
           AADRRLMGLICETKGDHE ALEHLVLASMAM ANGQE++VA VD SIGDSYLSLSR+DEA
Sbjct: 364 AADRRLMGLICETKGDHENALEHLVLASMAMAANGQESEVAFVDTSIGDSYLSLSRFDEA 423

Query: 464 VFAYQKALTVYKTTKGENHPAVGSVYVRLADLYNKTGKTRESVSYCENALRIYEKPISGI 523
           + AYQK+LT  KT KGENHPAVGSVY+RLADLYN+TGK RE+ SYCENALRIYE     I
Sbjct: 424 ICAYQKSLTALKTAKGENHPAVGSVYIRLADLYNRTGKVREAKSYCENALRIYESHNLEI 483

Query: 524 PPEEIASGLTNVAAIYESMNEAEQAVKLLHKALKIYSNAPGQQSTIAGIEAQMGVLYYML 583
            PEEIASGLT+++ I ESMNE EQA+ LL KALKIY+++PGQ+  IAGIEAQMGVLYYM+
Sbjct: 484 SPEEIASGLTDISVICESMNEVEQAITLLQKALKIYADSPGQKIMIAGIEAQMGVLYYMM 543

Query: 584 GNYSESYDSFKNAIPKLRNSGEKKSAFFGIALNQMGLACVQKYAINEAVELFEEAKSILE 643
           G Y ESY++FK+AI KLR +G+K+S FFGIALNQMGLAC+Q  AI EAVELFEEAK ILE
Sbjct: 544 GKYMESYNTFKSAISKLRATGKKQSTFFGIALNQMGLACIQLDAIEEAVELFEEAKCILE 603

Query: 644 KEYGPYHPDTLGVYSNLAGAYDAIGRLDDAIEMLEYVVGTREEKLGTANPDVDDEKRRLS 703
           +E GPYHP+TLG+YSNLAGAYDAIGRLDDAI++L +VVG REEKLGTANP  +DEKRRL+
Sbjct: 604 QECGPYHPETLGLYSNLAGAYDAIGRLDDAIKLLGHVVGVREEKLGTANPVTEDEKRRLA 642

Query: 704 ELLKEAGRVRSRKARSLETLLDAN 726
           +LLKEAG V  RKA+SL+TL+D++
Sbjct: 664 QLLKEAGNVTGRKAKSLKTLIDSD 642

[Close]

BLAST of CmaCh11G000970 vs. ExPASy Swiss-Prot
Match: Q9LII8 (Protein KINESIN LIGHT CHAIN-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=KLCR2 PE=1 SV=1)

HSP 1 Score: 745.3 bits (1923), Expect = 8.5e-214
Identity = 422/712 (59.27%), Postives = 513/712 (72.05%), Query Frame = 0


Query: 26  EESYGNKSPRSGLSVQSHGSVNVDFHVDGLVDTSIEKLYENVYDMQSS-DQSPSRRSFGS 85
           ++S    SPRS LS       ++D  +DG ++ SIE+LY NV +M+SS DQSPSR SF S
Sbjct: 12  DDSALQASPRSPLS-------SIDLAIDGAMNASIEQLYHNVCEMESSDDQSPSRASFIS 71

Query: 86  DGGESRIDSELNHLVGGEMREVEIIKEEEDIVERTENDFPSDSVKDLPSVEIKSTENSQP 145
            G ESRID EL HLVG    E E   ++E I+E+ E                +S      
Sbjct: 72  YGAESRIDLELRHLVGDVGEEGE--SKKEIILEKKE----------------ESNGEGSL 131

Query: 146 GSSKRLSSGKKASHLQLNHETSPKSSSSVKDLSDKSPISRKNEKSSKKTSPVASNSKKQK 205
              K LS+GKK +      +TSP         + K P SR + + S     V+ +     
Sbjct: 132 SQKKPLSNGKKVA------KTSPN--------NPKMPGSRISSRKSPDLGKVSVDE---- 191

Query: 206 DSPLRGSKILNGTEDFNESMMDNPDLGPYLLKQARSLVSSGENLQKALLLALRAAKAFEL 265
                                ++P+LG  LLKQAR LVSSGENL KAL LALRA K FE 
Sbjct: 192 ---------------------ESPELGVVLLKQARELVSSGENLNKALDLALRAVKVFEK 251

Query: 266 SANGKP--SLELVMCLHVTAAIYCSLGQYSEAIPLLEHSIEIPAIKEGQEHALAKFAGHM 325
              G+    L LVM LH+ AAIY  LG+Y++A+P+LE SIEIP I++G++HALAKFAG M
Sbjct: 252 CGEGEKQLGLNLVMSLHILAAIYAGLGRYNDAVPVLERSIEIPMIEDGEDHALAKFAGCM 311

Query: 326 QLGDTYAMLGLLENSLICYTTGLEVQKQVLGEADPRVGETYRYLAEAHVQALQFDEAEKF 385
           QLGD Y ++G +ENS++ YT GLE+Q+QVLGE+D RVGET RYLAEAHVQA+QF+EA + 
Sbjct: 312 QLGDMYGLMGQVENSIMLYTAGLEIQRQVLGESDARVGETCRYLAEAHVQAMQFEEASRL 371

Query: 386 CQMALNIHKKN--VGPASLEEAADRRLMGLICETKGDHEAALEHLVLASMAMVANGQETD 445
           CQMAL+IHK+N     AS+EEAADR+LMGLIC+ KGD+E ALEH VLASMAM +     D
Sbjct: 372 CQMALDIHKENGAAATASIEEAADRKLMGLICDAKGDYEVALEHYVLASMAMSSQNHRED 431

Query: 446 VAAVDCSIGDSYLSLSRYDEAVFAYQKALTVYKTTKGENHPAVGSVYVRLADLYNKTGKT 505
           VAAVDCSIGD+Y+SL+R+DEA+FAYQKAL V+K  KGE H +V  VYVRLADLYNK GKT
Sbjct: 432 VAAVDCSIGDAYMSLARFDEAIFAYQKALAVFKQGKGETHSSVALVYVRLADLYNKIGKT 491

Query: 506 RESVSYCENALRIYEKPISGIPPEEIASGLTNVAAIYESMNEAEQAVKLLHKALKIYSNA 565
           R+S SYCENAL+IY KP  G P EE+A+G   ++AIY+SMNE +QA+KLL +ALKIY+NA
Sbjct: 492 RDSKSYCENALKIYLKPTPGTPMEEVATGFIEISAIYQSMNELDQALKLLRRALKIYANA 551

Query: 566 PGQQSTIAGIEAQMGVLYYMLGNYSESYDSFKNAIPKLRNSGEKKSAFFGIALNQMGLAC 625
           PGQQ+TIAGIEAQMGV+ YM+GNYSESYD FK+AI K RNSGEKK+A FGIALNQMGLAC
Sbjct: 552 PGQQNTIAGIEAQMGVVTYMMGNYSESYDIFKSAISKFRNSGEKKTALFGIALNQMGLAC 611

Query: 626 VQKYAINEAVELFEEAKSILEKEYGPYHPDTLGVYSNLAGAYDAIGRLDDAIEMLEYVVG 685
           VQ+YAINEA +LFEEAK+ILEKE GPYHPDTL VYSNLAG YDA+GRLDDAIE+LEYVVG
Sbjct: 612 VQRYAINEAADLFEEAKTILEKECGPYHPDTLAVYSNLAGTYDAMGRLDDAIEILEYVVG 659

Query: 686 TREEKLGTANPDVDDEKRRLSELLKEAGRVRSRKARSLETLLDANTHPVNSK 733
           TREEKLGTANP+V+DEK+RL+ LLKEAGR RS++ R+L TLLD N    N +
Sbjct: 672 TREEKLGTANPEVEDEKQRLAALLKEAGRGRSKRNRALLTLLDNNPEIANGQ 659

[Close]

BLAST of CmaCh11G000970 vs. ExPASy Swiss-Prot
Match: O81629 (Protein KINESIN LIGHT CHAIN-RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=KLCR1 PE=1 SV=1)

HSP 1 Score: 641.7 bits (1654), Expect = 1.3e-182
Identity = 327/561 (58.29%), Postives = 429/561 (76.47%), Query Frame = 0


Query: 179 KSPISRKNEKSSKKTSPVASNSKKQKDSPLRGSKILNGTEDFNESMMDNPDLGPYLLKQA 238
           ++P+ +    +  ++ P  + S  +KDSP   S       D ++  +DNPDLGP+LLK A
Sbjct: 34  RTPMKKTPSSTPSRSKPSPNRSTGKKDSPTVSSSTA-AVIDVDDPSLDNPDLGPFLLKLA 93

Query: 239 RSLVSSGENLQKALLLALRAAKAFEL-----------SANGKPSLELVMCLHVTAAIYCS 298
           R  ++SGE   KAL  A+RA K+FE             ++G P L+L M LHV AAIYCS
Sbjct: 94  RDAIASGEGPNKALDYAIRATKSFERCCAAVAPPIPGGSDGGPVLDLAMSLHVLAAIYCS 153

Query: 299 LGQYSEAIPLLEHSIEIPAIKEGQEHALAKFAGHMQLGDTYAMLGLLENSLICYTTGLEV 358
           LG++ EA+P LE +I++P    G +H+LA F+GHMQLGDT +MLG ++ S+ CY  GL++
Sbjct: 154 LGRFDEAVPPLERAIQVPDPTRGPDHSLAAFSGHMQLGDTLSMLGQIDRSIACYEEGLKI 213

Query: 359 QKQVLGEADPRVGETYRYLAEAHVQALQFDEAEKFCQMALNIHKKNVGPASLEEAADRRL 418
           Q Q LG+ DPRVGET RYLAEA+VQA+QF++AE+ C+  L IH+ +  PASLEEAADRRL
Sbjct: 214 QIQTLGDTDPRVGETCRYLAEAYVQAMQFNKAEELCKKTLEIHRAHSEPASLEEAADRRL 273

Query: 419 MGLICETKGDHEAALEHLVLASMAMVANGQETDVAAVDCSIGDSYLSLSRYDEAVFAYQK 478
           M +ICE KGD+E ALEHLVLASMAM+A+GQE++VA++D SIG+ Y+SL R+DEAVF+YQK
Sbjct: 274 MAIICEAKGDYENALEHLVLASMAMIASGQESEVASIDVSIGNIYMSLCRFDEAVFSYQK 333

Query: 479 ALTVYKTTKGENHPAVGSVYVRLADLYNKTGKTRESVSYCENALRIYEKPISGIPPEEIA 538
           ALTV+K +KGE HP V SV+VRLA+LY++TGK RES SYCENALRIY KP+ G   EEIA
Sbjct: 334 ALTVFKASKGETHPTVASVFVRLAELYHRTGKLRESKSYCENALRIYNKPVPGTTVEEIA 393

Query: 539 SGLTNVAAIYESMNEAEQAVKLLHKALKIYSNAPGQQSTIAGIEAQMGVLYYMLGNYSES 598
            GLT ++AIYES++E E+A+KLL K++K+  + PGQQS IAG+EA+MGV+YY +G Y ++
Sbjct: 394 GGLTEISAIYESVDEPEEALKLLQKSMKLLEDKPGQQSAIAGLEARMGVMYYTVGRYEDA 453

Query: 599 YDSFKNAIPKLRNSGEKKSAFFGIALNQMGLACVQKYAINEAVELFEEAKSILEKEYGPY 658
            ++F++A+ KLR +GE KSAFFG+ LNQMGLACVQ + I+EA ELFEEA+ ILE+E GP 
Sbjct: 454 RNAFESAVTKLRAAGE-KSAFFGVVLNQMGLACVQLFKIDEAGELFEEARGILEQERGPC 513

Query: 659 HPDTLGVYSNLAGAYDAIGRLDDAIEMLEYVVGTREEKLGTANPDVDDEKRRLSELLKEA 718
             DTLGVYSNLA  YDA+GR++DAIE+LE V+  REEKLGTANPD +DEK+RL+ELLKEA
Sbjct: 514 DQDTLGVYSNLAATYDAMGRIEDAIEILEQVLKLREEKLGTANPDFEDEKKRLAELLKEA 573

Query: 719 GRVRSRKARSLETLLDANTHP 729
           GR R+ KA+SL+ L+D N  P
Sbjct: 574 GRSRNYKAKSLQNLIDPNARP 592

[Close]

BLAST of CmaCh11G000970 vs. ExPASy Swiss-Prot
Match: Q7KWX9 (Putative exosome complex component rrp40 OS=Dictyostelium discoideum OX=44689 GN=exosc3 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.2e-45
Identity = 100/227 (44.05%), Postives = 138/227 (60.79%), Query Frame = 0


Query: 750 LVDQPVVPGDVVLDLSNMTNETIKLGGGLRQDHDAISVAKVGKLRFSKPNK-YWVESSQK 809
           L DQ VVPGDV+  + ++    +++G GL Q  D +   K G LR+SK ++ YW+E+ QK
Sbjct: 4   LKDQFVVPGDVIGKIGDL---KVRIGPGLLQTKDTVLATKAGVLRYSKFHRFYWIENEQK 63

Query: 810 RYVPCAEDCVLGIVVDSRSDNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEMGALLYVRV 869
           RYVP  ED V+G +++  +++F VDI     A L   +FEG T+ N P   +G L+Y RV
Sbjct: 64  RYVPQVEDMVIGTIIEKHAESFKVDIGSSCSALLSAYSFEGATKSNKPLLNVGNLIYCRV 123

Query: 870 VKANPGMNPELACTDASGKAAGFGHLKDGYIFDCSTGLSRMLLSSPTCPVLESLGKKLSF 929
             AN  M PE+ C     KA GFG L  GY+ +CS GLS  LLS   C +L+ LGK + +
Sbjct: 124 TVANRDMEPEVVCLSQKQKAEGFGQLIGGYMLNCSLGLSHYLLSE-DCFLLQILGKHIPY 183

Query: 930 ETAVGINGRVWVNADSPSTTIVVSNAIMNSETLSGVQQRIMVDKLLN 976
           E AVG+NGRVW+N+ S   TIVVSN I NS+ +   Q    + K L+
Sbjct: 184 EIAVGVNGRVWINSGSNHNTIVVSNTIYNSQYIQDDQIEPFILKSLS 226

[Close]

BLAST of CmaCh11G000970 vs. ExPASy Swiss-Prot
Match: Q8IPX7 (Exosome complex component RRP40 OS=Drosophila melanogaster OX=7227 GN=Rrp40 PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 8.1e-39
Identity = 87/224 (38.84%), Postives = 131/224 (58.48%), Query Frame = 0


Query: 755 VVPGDVVLDLSNMT-NETIKLGGGLRQDHDAISVAKVGKLRFSKPNKYWVESSQKRYVPC 814
           V+PG+ +  +  +  ++ + LG GLR+  D +  +K G LR  +P  +WV++ Q+RY+P 
Sbjct: 8   VMPGERIAAIEELAKSKRVILGPGLRRLDDTVVASKAGPLRHKEPGTFWVDNYQRRYIPA 67

Query: 815 AEDCVLGIVVDSRSDNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEMGALLYVRVVKANP 874
             D +LGIV     D + VDI     A +  LAFE  +++N P    G L+Y RV+ A+ 
Sbjct: 68  RGDLILGIVRAKAGDLYRVDIGATDTASISYLAFEAASKKNRPDLIPGDLIYARVLNASA 127

Query: 875 GMNPELACTDASGKAAGFGHLKDGYIFDCSTGLSRMLLSSPTCPVLESLGKKLSFETAVG 934
            + PEL C ++ GK+   G L DG+ F CS  L RMLL    CPVL +L ++L +E AVG
Sbjct: 128 DIEPELVCVNSVGKSGKLGVLTDGFFFKCSLNLGRMLLRE-NCPVLAALTRELPYEIAVG 187

Query: 935 INGRVWVNADSPSTTIVVSNAIMNSETLSGVQQRIMVDKLLNNL 978
           +NGR+W+ A S   T+ ++NAI   E  SG  +   +DK+  NL
Sbjct: 188 VNGRIWLKAHSLKETVALANAISALEQ-SGCAE---IDKICGNL 226

[Close]

BLAST of CmaCh11G000970 vs. TAIR 10
Match: AT1G27500.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 759.6 bits (1960), Expect = 3.1e-219
Identity = 416/684 (60.82%), Postives = 519/684 (75.88%), Query Frame = 0


Query: 44  GSVNVDF-HVDGLVDTSIEKLYENVYDMQSSDQSPSRRSFGSDGGESRIDSELNHLVGGE 103
           GSVN    + D + DT+IE+L +N+ ++QSS+QSPSR+SFGS G ES+IDS+L HL  GE
Sbjct: 4   GSVNESHSNADQMFDTTIEELCKNLCELQSSNQSPSRQSFGSYGDESKIDSDLQHLALGE 63

Query: 104 MREVEIIKEEEDIVERTENDFPSDSVKDLPSVEIKSTENSQPGSSKRLSSGKKASHLQLN 163
           MR+++I+++E D           D V      ++KS  ++                  L+
Sbjct: 64  MRDIDILEDEGD----------EDEVAKPEEFDVKSNSSN------------------LD 123

Query: 164 HETSPKSSSSVKDLSDKSPISRKNEKSSKKTSPVASNSKKQKDSPLRGSKILNGTEDFNE 223
            E  P+               +  +K+  K++      +K+K   + G+K+ NG E   E
Sbjct: 124 LEVMPRDME-----------KQTGKKNVTKSNVGVGGMRKKK---VGGTKLQNGNE---E 183

Query: 224 SMMDNPDLGPYLLKQARSLVSSGENLQKALLLALRAAKAFELSA-NGKPSLELVMCLHVT 283
              +N +L  +LL QAR+LVSSG++  KAL L  RAAK FE SA NGKP LE +MCLHVT
Sbjct: 184 PSSENVELARFLLNQARNLVSSGDSTHKALELTHRAAKLFEASAENGKPCLEWIMCLHVT 243

Query: 284 AAIYCSLGQYSEAIPLLEHSIEIPAIKEGQEHALAKFAGHMQLGDTYAMLGLLENSLICY 343
           AA++C L +Y+EAIP+L+ S+EIP ++EG+EHALAKFAG MQLGDTYAM+G LE+S+ CY
Sbjct: 244 AAVHCKLKEYNEAIPVLQRSVEIPVVEEGEEHALAKFAGLMQLGDTYAMVGQLESSISCY 303

Query: 344 TTGLEVQKQVLGEADPRVGETYRYLAEAHVQALQFDEAEKFCQMALNIHKKNVGPASLEE 403
           T GL +QK+VLGE DPRVGET RYLAEA VQAL+FDEA++ C+ AL+IH+++  P S+ E
Sbjct: 304 TEGLNIQKKVLGENDPRVGETCRYLAEALVQALRFDEAQQVCETALSIHRESGLPGSIAE 363

Query: 404 AADRRLMGLICETKGDHEAALEHLVLASMAMVANGQETDVAAVDCSIGDSYLSLSRYDEA 463
           AADRRLMGLICETKGDHE ALEHLVLASMAM ANGQE++VA VD SIGDSYLSLSR+DEA
Sbjct: 364 AADRRLMGLICETKGDHENALEHLVLASMAMAANGQESEVAFVDTSIGDSYLSLSRFDEA 423

Query: 464 VFAYQKALTVYKTTKGENHPAVGSVYVRLADLYNKTGKTRESVSYCENALRIYEKPISGI 523
           + AYQK+LT  KT KGENHPAVGSVY+RLADLYN+TGK RE+ SYCENALRIYE     I
Sbjct: 424 ICAYQKSLTALKTAKGENHPAVGSVYIRLADLYNRTGKVREAKSYCENALRIYESHNLEI 483

Query: 524 PPEEIASGLTNVAAIYESMNEAEQAVKLLHKALKIYSNAPGQQSTIAGIEAQMGVLYYML 583
            PEEIASGLT+++ I ESMNE EQA+ LL KALKIY+++PGQ+  IAGIEAQMGVLYYM+
Sbjct: 484 SPEEIASGLTDISVICESMNEVEQAITLLQKALKIYADSPGQKIMIAGIEAQMGVLYYMM 543

Query: 584 GNYSESYDSFKNAIPKLRNSGEKKSAFFGIALNQMGLACVQKYAINEAVELFEEAKSILE 643
           G Y ESY++FK+AI KLR +G+K+S FFGIALNQMGLAC+Q  AI EAVELFEEAK ILE
Sbjct: 544 GKYMESYNTFKSAISKLRATGKKQSTFFGIALNQMGLACIQLDAIEEAVELFEEAKCILE 603

Query: 644 KEYGPYHPDTLGVYSNLAGAYDAIGRLDDAIEMLEYVVGTREEKLGTANPDVDDEKRRLS 703
           +E GPYHP+TLG+YSNLAGAYDAIGRLDDAI++L +VVG REEKLGTANP  +DEKRRL+
Sbjct: 604 QECGPYHPETLGLYSNLAGAYDAIGRLDDAIKLLGHVVGVREEKLGTANPVTEDEKRRLA 642

Query: 704 ELLKEAGRVRSRKARSLETLLDAN 726
           +LLKEAG V  RKA+SL+TL+D++
Sbjct: 664 QLLKEAGNVTGRKAKSLKTLIDSD 642

[Close]

BLAST of CmaCh11G000970 vs. TAIR 10
Match: AT3G27960.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 745.3 bits (1923), Expect = 6.0e-215
Identity = 422/712 (59.27%), Postives = 513/712 (72.05%), Query Frame = 0


Query: 26  EESYGNKSPRSGLSVQSHGSVNVDFHVDGLVDTSIEKLYENVYDMQSS-DQSPSRRSFGS 85
           ++S    SPRS LS       ++D  +DG ++ SIE+LY NV +M+SS DQSPSR SF S
Sbjct: 12  DDSALQASPRSPLS-------SIDLAIDGAMNASIEQLYHNVCEMESSDDQSPSRASFIS 71

Query: 86  DGGESRIDSELNHLVGGEMREVEIIKEEEDIVERTENDFPSDSVKDLPSVEIKSTENSQP 145
            G ESRID EL HLVG    E E   ++E I+E+ E                +S      
Sbjct: 72  YGAESRIDLELRHLVGDVGEEGE--SKKEIILEKKE----------------ESNGEGSL 131

Query: 146 GSSKRLSSGKKASHLQLNHETSPKSSSSVKDLSDKSPISRKNEKSSKKTSPVASNSKKQK 205
              K LS+GKK +      +TSP         + K P SR + + S     V+ +     
Sbjct: 132 SQKKPLSNGKKVA------KTSPN--------NPKMPGSRISSRKSPDLGKVSVDE---- 191

Query: 206 DSPLRGSKILNGTEDFNESMMDNPDLGPYLLKQARSLVSSGENLQKALLLALRAAKAFEL 265
                                ++P+LG  LLKQAR LVSSGENL KAL LALRA K FE 
Sbjct: 192 ---------------------ESPELGVVLLKQARELVSSGENLNKALDLALRAVKVFEK 251

Query: 266 SANGKP--SLELVMCLHVTAAIYCSLGQYSEAIPLLEHSIEIPAIKEGQEHALAKFAGHM 325
              G+    L LVM LH+ AAIY  LG+Y++A+P+LE SIEIP I++G++HALAKFAG M
Sbjct: 252 CGEGEKQLGLNLVMSLHILAAIYAGLGRYNDAVPVLERSIEIPMIEDGEDHALAKFAGCM 311

Query: 326 QLGDTYAMLGLLENSLICYTTGLEVQKQVLGEADPRVGETYRYLAEAHVQALQFDEAEKF 385
           QLGD Y ++G +ENS++ YT GLE+Q+QVLGE+D RVGET RYLAEAHVQA+QF+EA + 
Sbjct: 312 QLGDMYGLMGQVENSIMLYTAGLEIQRQVLGESDARVGETCRYLAEAHVQAMQFEEASRL 371

Query: 386 CQMALNIHKKN--VGPASLEEAADRRLMGLICETKGDHEAALEHLVLASMAMVANGQETD 445
           CQMAL+IHK+N     AS+EEAADR+LMGLIC+ KGD+E ALEH VLASMAM +     D
Sbjct: 372 CQMALDIHKENGAAATASIEEAADRKLMGLICDAKGDYEVALEHYVLASMAMSSQNHRED 431

Query: 446 VAAVDCSIGDSYLSLSRYDEAVFAYQKALTVYKTTKGENHPAVGSVYVRLADLYNKTGKT 505
           VAAVDCSIGD+Y+SL+R+DEA+FAYQKAL V+K  KGE H +V  VYVRLADLYNK GKT
Sbjct: 432 VAAVDCSIGDAYMSLARFDEAIFAYQKALAVFKQGKGETHSSVALVYVRLADLYNKIGKT 491

Query: 506 RESVSYCENALRIYEKPISGIPPEEIASGLTNVAAIYESMNEAEQAVKLLHKALKIYSNA 565
           R+S SYCENAL+IY KP  G P EE+A+G   ++AIY+SMNE +QA+KLL +ALKIY+NA
Sbjct: 492 RDSKSYCENALKIYLKPTPGTPMEEVATGFIEISAIYQSMNELDQALKLLRRALKIYANA 551

Query: 566 PGQQSTIAGIEAQMGVLYYMLGNYSESYDSFKNAIPKLRNSGEKKSAFFGIALNQMGLAC 625
           PGQQ+TIAGIEAQMGV+ YM+GNYSESYD FK+AI K RNSGEKK+A FGIALNQMGLAC
Sbjct: 552 PGQQNTIAGIEAQMGVVTYMMGNYSESYDIFKSAISKFRNSGEKKTALFGIALNQMGLAC 611

Query: 626 VQKYAINEAVELFEEAKSILEKEYGPYHPDTLGVYSNLAGAYDAIGRLDDAIEMLEYVVG 685
           VQ+YAINEA +LFEEAK+ILEKE GPYHPDTL VYSNLAG YDA+GRLDDAIE+LEYVVG
Sbjct: 612 VQRYAINEAADLFEEAKTILEKECGPYHPDTLAVYSNLAGTYDAMGRLDDAIEILEYVVG 659

Query: 686 TREEKLGTANPDVDDEKRRLSELLKEAGRVRSRKARSLETLLDANTHPVNSK 733
           TREEKLGTANP+V+DEK+RL+ LLKEAGR RS++ R+L TLLD N    N +
Sbjct: 672 TREEKLGTANPEVEDEKQRLAALLKEAGRGRSKRNRALLTLLDNNPEIANGQ 659

[Close]

BLAST of CmaCh11G000970 vs. TAIR 10
Match: AT4G10840.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 641.7 bits (1654), Expect = 9.4e-184
Identity = 327/561 (58.29%), Postives = 429/561 (76.47%), Query Frame = 0


Query: 179 KSPISRKNEKSSKKTSPVASNSKKQKDSPLRGSKILNGTEDFNESMMDNPDLGPYLLKQA 238
           ++P+ +    +  ++ P  + S  +KDSP   S       D ++  +DNPDLGP+LLK A
Sbjct: 34  RTPMKKTPSSTPSRSKPSPNRSTGKKDSPTVSSSTA-AVIDVDDPSLDNPDLGPFLLKLA 93

Query: 239 RSLVSSGENLQKALLLALRAAKAFEL-----------SANGKPSLELVMCLHVTAAIYCS 298
           R  ++SGE   KAL  A+RA K+FE             ++G P L+L M LHV AAIYCS
Sbjct: 94  RDAIASGEGPNKALDYAIRATKSFERCCAAVAPPIPGGSDGGPVLDLAMSLHVLAAIYCS 153

Query: 299 LGQYSEAIPLLEHSIEIPAIKEGQEHALAKFAGHMQLGDTYAMLGLLENSLICYTTGLEV 358
           LG++ EA+P LE +I++P    G +H+LA F+GHMQLGDT +MLG ++ S+ CY  GL++
Sbjct: 154 LGRFDEAVPPLERAIQVPDPTRGPDHSLAAFSGHMQLGDTLSMLGQIDRSIACYEEGLKI 213

Query: 359 QKQVLGEADPRVGETYRYLAEAHVQALQFDEAEKFCQMALNIHKKNVGPASLEEAADRRL 418
           Q Q LG+ DPRVGET RYLAEA+VQA+QF++AE+ C+  L IH+ +  PASLEEAADRRL
Sbjct: 214 QIQTLGDTDPRVGETCRYLAEAYVQAMQFNKAEELCKKTLEIHRAHSEPASLEEAADRRL 273

Query: 419 MGLICETKGDHEAALEHLVLASMAMVANGQETDVAAVDCSIGDSYLSLSRYDEAVFAYQK 478
           M +ICE KGD+E ALEHLVLASMAM+A+GQE++VA++D SIG+ Y+SL R+DEAVF+YQK
Sbjct: 274 MAIICEAKGDYENALEHLVLASMAMIASGQESEVASIDVSIGNIYMSLCRFDEAVFSYQK 333

Query: 479 ALTVYKTTKGENHPAVGSVYVRLADLYNKTGKTRESVSYCENALRIYEKPISGIPPEEIA 538
           ALTV+K +KGE HP V SV+VRLA+LY++TGK RES SYCENALRIY KP+ G   EEIA
Sbjct: 334 ALTVFKASKGETHPTVASVFVRLAELYHRTGKLRESKSYCENALRIYNKPVPGTTVEEIA 393

Query: 539 SGLTNVAAIYESMNEAEQAVKLLHKALKIYSNAPGQQSTIAGIEAQMGVLYYMLGNYSES 598
            GLT ++AIYES++E E+A+KLL K++K+  + PGQQS IAG+EA+MGV+YY +G Y ++
Sbjct: 394 GGLTEISAIYESVDEPEEALKLLQKSMKLLEDKPGQQSAIAGLEARMGVMYYTVGRYEDA 453

Query: 599 YDSFKNAIPKLRNSGEKKSAFFGIALNQMGLACVQKYAINEAVELFEEAKSILEKEYGPY 658
            ++F++A+ KLR +GE KSAFFG+ LNQMGLACVQ + I+EA ELFEEA+ ILE+E GP 
Sbjct: 454 RNAFESAVTKLRAAGE-KSAFFGVVLNQMGLACVQLFKIDEAGELFEEARGILEQERGPC 513

Query: 659 HPDTLGVYSNLAGAYDAIGRLDDAIEMLEYVVGTREEKLGTANPDVDDEKRRLSELLKEA 718
             DTLGVYSNLA  YDA+GR++DAIE+LE V+  REEKLGTANPD +DEK+RL+ELLKEA
Sbjct: 514 DQDTLGVYSNLAATYDAMGRIEDAIEILEQVLKLREEKLGTANPDFEDEKKRLAELLKEA 573

Query: 719 GRVRSRKARSLETLLDANTHP 729
           GR R+ KA+SL+ L+D N  P
Sbjct: 574 GRSRNYKAKSLQNLIDPNARP 592

[Close]

BLAST of CmaCh11G000970 vs. TAIR 10
Match: AT4G10840.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 564.3 bits (1453), Expect = 1.9e-160
Identity = 287/500 (57.40%), Postives = 378/500 (75.60%), Query Frame = 0


Query: 179 KSPISRKNEKSSKKTSPVASNSKKQKDSPLRGSKILNGTEDFNESMMDNPDLGPYLLKQA 238
           ++P+ +    +  ++ P  + S  +KDSP   S       D ++  +DNPDLGP+LLK A
Sbjct: 34  RTPMKKTPSSTPSRSKPSPNRSTGKKDSPTVSSSTA-AVIDVDDPSLDNPDLGPFLLKLA 93

Query: 239 RSLVSSGENLQKALLLALRAAKAFEL-----------SANGKPSLELVMCLHVTAAIYCS 298
           R  ++SGE   KAL  A+RA K+FE             ++G P L+L M LHV AAIYCS
Sbjct: 94  RDAIASGEGPNKALDYAIRATKSFERCCAAVAPPIPGGSDGGPVLDLAMSLHVLAAIYCS 153

Query: 299 LGQYSEAIPLLEHSIEIPAIKEGQEHALAKFAGHMQLGDTYAMLGLLENSLICYTTGLEV 358
           LG++ EA+P LE +I++P    G +H+LA F+GHMQLGDT +MLG ++ S+ CY  GL++
Sbjct: 154 LGRFDEAVPPLERAIQVPDPTRGPDHSLAAFSGHMQLGDTLSMLGQIDRSIACYEEGLKI 213

Query: 359 QKQVLGEADPRVGETYRYLAEAHVQALQFDEAEKFCQMALNIHKKNVGPASLEEAADRRL 418
           Q Q LG+ DPRVGET RYLAEA+VQA+QF++AE+ C+  L IH+ +  PASLEEAADRRL
Sbjct: 214 QIQTLGDTDPRVGETCRYLAEAYVQAMQFNKAEELCKKTLEIHRAHSEPASLEEAADRRL 273

Query: 419 MGLICETKGDHEAALEHLVLASMAMVANGQETDVAAVDCSIGDSYLSLSRYDEAVFAYQK 478
           M +ICE KGD+E ALEHLVLASMAM+A+GQE++VA++D SIG+ Y+SL R+DEAVF+YQK
Sbjct: 274 MAIICEAKGDYENALEHLVLASMAMIASGQESEVASIDVSIGNIYMSLCRFDEAVFSYQK 333

Query: 479 ALTVYKTTKGENHPAVGSVYVRLADLYNKTGKTRESVSYCENALRIYEKPISGIPPEEIA 538
           ALTV+K +KGE HP V SV+VRLA+LY++TGK RES SYCENALRIY KP+ G   EEIA
Sbjct: 334 ALTVFKASKGETHPTVASVFVRLAELYHRTGKLRESKSYCENALRIYNKPVPGTTVEEIA 393

Query: 539 SGLTNVAAIYESMNEAEQAVKLLHKALKIYSNAPGQQSTIAGIEAQMGVLYYMLGNYSES 598
            GLT ++AIYES++E E+A+KLL K++K+  + PGQQS IAG+EA+MGV+YY +G Y ++
Sbjct: 394 GGLTEISAIYESVDEPEEALKLLQKSMKLLEDKPGQQSAIAGLEARMGVMYYTVGRYEDA 453

Query: 599 YDSFKNAIPKLRNSGEKKSAFFGIALNQMGLACVQKYAINEAVELFEEAKSILEKEYGPY 658
            ++F++A+ KLR +GE KSAFFG+ LNQMGLACVQ + I+EA ELFEEA+ ILE+E GP 
Sbjct: 454 RNAFESAVTKLRAAGE-KSAFFGVVLNQMGLACVQLFKIDEAGELFEEARGILEQERGPC 513

Query: 659 HPDTLGVYSNLAGAYDAIGR 668
             DTLGVYSNLA  YDA+GR
Sbjct: 514 DQDTLGVYSNLAATYDAMGR 531

[Close]

BLAST of CmaCh11G000970 vs. TAIR 10
Match: AT2G25355.1 (PNAS-3 related )

HSP 1 Score: 350.9 bits (899), Expect = 3.3e-96
Identity = 171/234 (73.08%), Postives = 197/234 (84.19%), Query Frame = 0


Query: 744 SSSSSILVDQPVVPGDVVLDLSNMTNETIKLGGGLRQDHDAISVAKVGKLRFSKPNKYWV 803
           S+S + L+DQ VVPGDVVLDLSNMTN+TIKLG GLRQD++ ISV + GKLR+SKPNKYWV
Sbjct: 6   STSPTSLIDQTVVPGDVVLDLSNMTNQTIKLGSGLRQDNEVISVMRAGKLRYSKPNKYWV 65

Query: 804 ESSQKRYVPCAEDCVLGIVVDSRSDNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEMGAL 863
           ESS KRYVP  ED VLGIVVD + +N+ +DIKGP LA LPVLAFEG  RRN PKFE+  L
Sbjct: 66  ESSHKRYVPRPEDHVLGIVVDCKGENYWIDIKGPQLALLPVLAFEGANRRNYPKFEVSTL 125

Query: 864 LYVRVVKANPGMNPELACTDASGKAAGFGHLKDGYIFDCSTGLSRMLLSSPTCPVLESLG 923
           LY RVVK N GMNPEL+C D SGKAAGFG LKDG++F+ STGLSRMLLSSPTCPVLE+LG
Sbjct: 126 LYTRVVKTNTGMNPELSCVDESGKAAGFGPLKDGFMFETSTGLSRMLLSSPTCPVLEALG 185

Query: 924 KKLSFETAVGINGRVWVNADSPSTTIVVSNAIMNSETLSGVQQRIMVDKLLNNL 978
           KKLSFETA G+NGR WV+A +P   I+V+NA+MNSETLSG QQRIMV+KLL  +
Sbjct: 186 KKLSFETAFGLNGRCWVHAAAPRIVIIVANALMNSETLSGTQQRIMVEKLLEKI 239

The following BLAST results are available for this feature:

BLAST of CmaCh11G000970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HSX9	4.4e-218	60.82	Protein KINESIN LIGHT CHAIN-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=KLCR3 P...	[more]
Q9LII8	8.5e-214	59.27	Protein KINESIN LIGHT CHAIN-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=KLCR2 P...	[more]
O81629	1.3e-182	58.29	Protein KINESIN LIGHT CHAIN-RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=KLCR1 P...	[more]
Q7KWX9	1.2e-45	44.05	Putative exosome complex component rrp40 OS=Dictyostelium discoideum OX=44689 GN...	[more]
Q8IPX7	8.1e-39	38.84	Exosome complex component RRP40 OS=Drosophila melanogaster OX=7227 GN=Rrp40 PE=1...	[more]

BLAST of CmaCh11G000970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27500.1	3.1e-219	60.82	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G27960.1	6.0e-215	59.27	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G10840.1	9.4e-184	58.29	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G10840.2	1.9e-160	57.40	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G25355.1	3.3e-96	73.08	PNAS-3 related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 693..713
None	No IPR available	COILS	Coil	Coil	coord: 540..560
None	No IPR available	GENE3D	2.40.50.140		coord: 816..892 e-value: 3.3E-24 score: 86.3
None	No IPR available	PFAM	PF13424	TPR_12	coord: 611..676 e-value: 3.6E-10 score: 40.0 coord: 323..392 e-value: 1.1E-7 score: 32.0 coord: 441..516 e-value: 1.6E-11 score: 44.3
None	No IPR available	GENE3D	2.40.50.100		coord: 742..811 e-value: 2.6E-13 score: 51.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..225
None	No IPR available	PANTHER	PTHR46284	PROTEIN KINESIN LIGHT CHAIN-RELATED 3	coord: 1..725
None	No IPR available	PANTHER	PTHR46284:SF5	PROTEIN KINESIN LIGHT CHAIN-RELATED 3	coord: 1..725
None	No IPR available	SUPERFAMILY	110324	Ribosomal L27 protein-like	coord: 748..808
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 442..475 e-value: 0.68 score: 19.0 coord: 318..351 e-value: 15.0 score: 13.3 coord: 360..393 e-value: 0.17 score: 21.0 coord: 484..517 e-value: 0.18 score: 20.9 coord: 610..643 e-value: 31.0 score: 10.6 coord: 568..601 e-value: 6.7 score: 15.7 coord: 275..308 e-value: 150.0 score: 4.6 coord: 527..560 e-value: 0.16 score: 21.1 coord: 652..685 e-value: 87.0 score: 6.7
IPR019734	Tetratricopeptide repeat	PFAM	PF13176	TPR_7	coord: 282..304 e-value: 0.028 score: 14.4
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 442..475 score: 9.0569
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 527..560 score: 8.5849
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 236..429 e-value: 3.4E-20 score: 74.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 430..608 e-value: 4.6E-50 score: 172.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 612..725 e-value: 5.6E-13 score: 51.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 253..686
IPR004088	K Homology domain, type 1	PFAM	PF15985	KH_6	coord: 897..945 e-value: 1.2E-15 score: 57.7
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 893..976 e-value: 3.7E-27 score: 95.8
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 896..978
IPR037319	Rrp40, S1 domain	CDD	cd05790	S1_Rrp40	coord: 809..894 e-value: 4.33755E-37 score: 131.998
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 808..901

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G000970.1	CmaCh11G000970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0016740	transferase activity