CmaCh11G000930 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G000930
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	transcription factor MYB98-like
Location	Cma_Chr11: 458271 .. 460121 (-)
RNA-Seq Expression	CmaCh11G000930
Synteny	CmaCh11G000930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTCGAGTCGAATCTGACAGAAAATCTCAGCTCCAATCAAGCCTGCAAGGAAGATGAACTTTCATTTCAGTTTCTTGCATCAAAAGGTAATTATCTACATGAATTTCACCACCTCGATTCATCGTCGAATCCCATACTCGAAGACGAAAACATGTGCAGTTTGGATCATTTCAATCCATATTCATATGGGTGTTCATCAAATAACAGCAATACTGCTGTTGAGGATTTGTATGAGCTTAATAAAGCTTGTGCAGATCAAAATGGTGGGTGTGGACAAGTAATGGACAACTTCCAAAGCTCAGGAGATTACTACAACTTTCATCAAATGAATCAAATTGACGTAACGGGGCTGGAAAGGAATTCAATTCCACTGGATTTCCCAGATGTAAAACCTGTGAATTTCTTTGTACCTGATGAAGTCTCGTGCATTACTTCAGGAAATGGCCATTTCCAAAAGGCTACCATGAATAAGAATGTGAATTTTTCATCTTTGTTGAGAACTTCTAAAGGTCAAAAGAAGCCCAATGTGATCAAAGGGCAGTGGACAGTTGAAGAAGATAGGTAAGAATTACAGAAAAAAGAAAGCAAAGAAAAATAGCTAAGTATTCTGCCAGTACAACAGATCTCAACTTTTGTAAATCTGTTTTGAAATATAATGTGGTTGATTTGATATTTGTGTTGAAAAAAACAGGGTTTTGGTTCAGTTGGTTGAACAATATGGAACGAGAAAATGGTCTCATATTGCACAGACGTTGCCTGGGAGAATAGGCAAACAGTGCAGAGAGAGATGGCACAACCATCTCAGGCCTGACATCAAGGTATTTCGATCAAACAACTTGAATCCAATTTGAACTTAATTTCCATTTGGACCAAGTTTTGATTAGTTGCTGTCTCAAAAGTGATCCTAGGCTCTAGTATCTAAATTGTTTAACTAAGATTTGAATTCTGTTTCTATTTAGTTCGATCTCTACATATAGATACCTATCTGGTTCATACTATTTTGGTCTAAGAATTGCTGGTTTGTTAATAAACGAAATCATAACAAAGTTCAGATCTAAGAAGCTAAAATTGCATTTAACTTCTAATTTTTAGGTAACTTGAGTAGATAATTTAACAAGTGAGAGCTATATTCATTCATGTTAGCAAGTGAATCACATTTTTACTAAACAAAATTGATTGAAAATGAATGCAGAAGGACACATGGAGTGAAGAAGAGGACAGAGTTTTAATTGAAGCACATGCAGAAATAGGGAACAAATGGGCAGAAATTGCAAAGAGATTACCAGGAAGAACTGAAAATTCAATAAAGAACCACTGGAATGCAACCAAAAGAAGGCAATATTCTAAACGAAAATGTAGATCCAAATATCCAAGGTGCTCTCTTCTGCAGGACTACATAAAGAGCCTGGATTCCAACACAACTCGCCACCAGAAGAAAATTTGCCCAACCGATACCAAATCAAAATCGAAATTGGCCGATCGTCGTCATCGTCAACCACAATCCGCTAATTTTTGCCCTAATGATTGGACGGTTCCGAATTCCGATTTAAAGGACGAAGCAGAGTTTTACCTCGACGATAATTTCTTTCGAGAAGGATGTAGCATCGACACGCTCATGGAGAATATAGCTGCCGCCTCCGCTGACGATGCCAATAATTATGATCGGAAAAGATATCACGGCAATGAAGAATTAGTTGAGTTTCATCATAGAAGCATTGTTGAAATGGAGAAATTGCAGAATTGTGCTCCAGTGAAAACGGCGGCAGCGATGGAGTTTGAAGTAACAAAAGAACTTGATTTAGTAGAAATGATGAGTCAAGTGAATGAAGTTAACAAGATGAGATGA

mRNA sequence

ATGGAGCTCGAGTCGAATCTGACAGAAAATCTCAGCTCCAATCAAGCCTGCAAGGAAGATGAACTTTCATTTCAGTTTCTTGCATCAAAAGGTAATTATCTACATGAATTTCACCACCTCGATTCATCGTCGAATCCCATACTCGAAGACGAAAACATGTGCAGTTTGGATCATTTCAATCCATATTCATATGGGTGTTCATCAAATAACAGCAATACTGCTGTTGAGGATTTGTATGAGCTTAATAAAGCTTGTGCAGATCAAAATGGTGGGTGTGGACAAGTAATGGACAACTTCCAAAGCTCAGGAGATTACTACAACTTTCATCAAATGAATCAAATTGACGTAACGGGGCTGGAAAGGAATTCAATTCCACTGGATTTCCCAGATGTAAAACCTGTGAATTTCTTTGTACCTGATGAAGTCTCGTGCATTACTTCAGGAAATGGCCATTTCCAAAAGGCTACCATGAATAAGAATGTGAATTTTTCATCTTTGTTGAGAACTTCTAAAGGTCAAAAGAAGCCCAATGTGATCAAAGGGCAGTGGACAGTTGAAGAAGATAGGGTTTTGGTTCAGTTGGTTGAACAATATGGAACGAGAAAATGGTCTCATATTGCACAGACGTTGCCTGGGAGAATAGGCAAACAGTGCAGAGAGAGATGGCACAACCATCTCAGGCCTGACATCAAGAAGGACACATGGAGTGAAGAAGAGGACAGAGTTTTAATTGAAGCACATGCAGAAATAGGGAACAAATGGGCAGAAATTGCAAAGAGATTACCAGGAAGAACTGAAAATTCAATAAAGAACCACTGGAATGCAACCAAAAGAAGGCAATATTCTAAACGAAAATGTAGATCCAAATATCCAAGGTGCTCTCTTCTGCAGGACTACATAAAGAGCCTGGATTCCAACACAACTCGCCACCAGAAGAAAATTTGCCCAACCGATACCAAATCAAAATCGAAATTGGCCGATCGTCGTCATCGTCAACCACAATCCGCTAATTTTTGCCCTAATGATTGGACGGTTCCGAATTCCGATTTAAAGGACGAAGCAGAGTTTTACCTCGACGATAATTTCTTTCGAGAAGGATGTAGCATCGACACGCTCATGGAGAATATAGCTGCCGCCTCCGCTGACGATGCCAATAATTATGATCGGAAAAGATATCACGGCAATGAAGAATTAGTTGAGTTTCATCATAGAAGCATTGTTGAAATGGAGAAATTGCAGAATTGTGCTCCAGTGAAAACGGCGGCAGCGATGGAGTTTGAAGTAACAAAAGAACTTGATTTAGTAGAAATGATGAGTCAAGTGAATGAAGTTAACAAGATGAGATGA

Coding sequence (CDS)

ATGGAGCTCGAGTCGAATCTGACAGAAAATCTCAGCTCCAATCAAGCCTGCAAGGAAGATGAACTTTCATTTCAGTTTCTTGCATCAAAAGGTAATTATCTACATGAATTTCACCACCTCGATTCATCGTCGAATCCCATACTCGAAGACGAAAACATGTGCAGTTTGGATCATTTCAATCCATATTCATATGGGTGTTCATCAAATAACAGCAATACTGCTGTTGAGGATTTGTATGAGCTTAATAAAGCTTGTGCAGATCAAAATGGTGGGTGTGGACAAGTAATGGACAACTTCCAAAGCTCAGGAGATTACTACAACTTTCATCAAATGAATCAAATTGACGTAACGGGGCTGGAAAGGAATTCAATTCCACTGGATTTCCCAGATGTAAAACCTGTGAATTTCTTTGTACCTGATGAAGTCTCGTGCATTACTTCAGGAAATGGCCATTTCCAAAAGGCTACCATGAATAAGAATGTGAATTTTTCATCTTTGTTGAGAACTTCTAAAGGTCAAAAGAAGCCCAATGTGATCAAAGGGCAGTGGACAGTTGAAGAAGATAGGGTTTTGGTTCAGTTGGTTGAACAATATGGAACGAGAAAATGGTCTCATATTGCACAGACGTTGCCTGGGAGAATAGGCAAACAGTGCAGAGAGAGATGGCACAACCATCTCAGGCCTGACATCAAGAAGGACACATGGAGTGAAGAAGAGGACAGAGTTTTAATTGAAGCACATGCAGAAATAGGGAACAAATGGGCAGAAATTGCAAAGAGATTACCAGGAAGAACTGAAAATTCAATAAAGAACCACTGGAATGCAACCAAAAGAAGGCAATATTCTAAACGAAAATGTAGATCCAAATATCCAAGGTGCTCTCTTCTGCAGGACTACATAAAGAGCCTGGATTCCAACACAACTCGCCACCAGAAGAAAATTTGCCCAACCGATACCAAATCAAAATCGAAATTGGCCGATCGTCGTCATCGTCAACCACAATCCGCTAATTTTTGCCCTAATGATTGGACGGTTCCGAATTCCGATTTAAAGGACGAAGCAGAGTTTTACCTCGACGATAATTTCTTTCGAGAAGGATGTAGCATCGACACGCTCATGGAGAATATAGCTGCCGCCTCCGCTGACGATGCCAATAATTATGATCGGAAAAGATATCACGGCAATGAAGAATTAGTTGAGTTTCATCATAGAAGCATTGTTGAAATGGAGAAATTGCAGAATTGTGCTCCAGTGAAAACGGCGGCAGCGATGGAGTTTGAAGTAACAAAAGAACTTGATTTAGTAGAAATGATGAGTCAAGTGAATGAAGTTAACAAGATGAGATGA

Protein sequence

MELESNLTENLSSNQACKEDELSFQFLASKGNYLHEFHHLDSSSNPILEDENMCSLDHFNPYSYGCSSNNSNTAVEDLYELNKACADQNGGCGQVMDNFQSSGDYYNFHQMNQIDVTGLERNSIPLDFPDVKPVNFFVPDEVSCITSGNGHFQKATMNKNVNFSSLLRTSKGQKKPNVIKGQWTVEEDRVLVQLVEQYGTRKWSHIAQTLPGRIGKQCRERWHNHLRPDIKKDTWSEEEDRVLIEAHAEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCRSKYPRCSLLQDYIKSLDSNTTRHQKKICPTDTKSKSKLADRRHRQPQSANFCPNDWTVPNSDLKDEAEFYLDDNFFREGCSIDTLMENIAAASADDANNYDRKRYHGNEELVEFHHRSIVEMEKLQNCAPVKTAAAMEFEVTKELDLVEMMSQVNEVNKMR

Homology

[Close]

BLAST of CmaCh11G000930 vs. ExPASy Swiss-Prot
Match: Q9S7L2 (Transcription factor MYB98 OS=Arabidopsis thaliana OX=3702 GN=MYB98 PE=2 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 5.6e-80
Identity = 183/420 (43.57%), Postives = 253/420 (60.24%), Query Frame = 0


Query: 5   SNLTENL--SSNQACKEDELSFQFL--ASKGNYLHEFHHLD-------------SSSNPI 64
           ++L +N+     +  KE++  F+ +  +   ++L +FHHLD             SSS+P+
Sbjct: 11  ASLNQNIFTRDQEHMKEEDFPFEVVDQSKPTSFLQDFHHLDHDHQFDHHHHHGSSSSHPL 70

Query: 65  LEDENMCSLDHFNPYSYGCSSNNSNTAVEDLYELNKACADQNGGCGQVMDNFQSSGDYYN 124
           L  +   S  +  P+ + CS   +   + D YE        N    Q ++N   + ++++
Sbjct: 71  LSVQTTSSCINNAPFEH-CSYQEN---MVDFYETKPNL--MNHHHFQAVENSYFTRNHHH 130

Query: 125 FHQMNQI----DVTGLERNS------IPLDFPDV---KPVNFFVPDEVSCITSGNGHFQK 184
             ++N +    D   LE+N+      IP D+P     KP+NF +PDE+SC+++ N  ++ 
Sbjct: 131 HQEINLVDEHDDPMDLEQNNMMMMRMIPFDYPPTETFKPMNFVMPDEISCVSADNDCYRA 190

Query: 185 ATMNKNVNF-------SSLLRTSKGQKKPNVIKGQWTVEEDRVLVQLVEQYGTRKWSHIA 244
            + NK   F       SS   + K  KK  ++KGQWT EEDRVL+QLVE+YG RKWSHIA
Sbjct: 191 TSFNKTKPFLTRKLSSSSSSSSWKETKKSTLVKGQWTAEEDRVLIQLVEKYGLRKWSHIA 250

Query: 245 QTLPGRIGKQCRERWHNHLRPDIKKDTWSEEEDRVLIEAHAEIGNKWAEIAKRLPGRTEN 304
           Q LPGRIGKQCRERWHNHLRPDIKK+TWSEEEDRVLIE H EIGNKWAEIAKRLPGRTEN
Sbjct: 251 QVLPGRIGKQCRERWHNHLRPDIKKETWSEEEDRVLIEFHKEIGNKWAEIAKRLPGRTEN 310

Query: 305 SIKNHWNATKRRQYSKRKCRSKYPRCSLLQDYIKSLD-----SNTTRHQKKICPTDTKSK 364
           SIKNHWNATKRRQ+SKRKCRSKYPR SLLQDYIKSL+     +++   + +   ++ K K
Sbjct: 311 SIKNHWNATKRRQFSKRKCRSKYPRPSLLQDYIKSLNMGALMASSVPARGRRRESNNKKK 370

Query: 365 SKLADRRHRQPQSANFCPNDWTVPNSDLKDEAEFYLDDNFFREGCSIDTLMENIAAASAD 383
             +     ++ +   +   D  VP     D  +F  ++    EGCSID+L+++I     D
Sbjct: 371 DVVVAVEEKKKEEEVY-GQDRIVPECVFTD--DFGFNEKLLEEGCSIDSLLDDIPQPDID 421

[Close]

BLAST of CmaCh11G000930 vs. ExPASy Swiss-Prot
Match: Q9LVW4 (Transcription factor MYB118 OS=Arabidopsis thaliana OX=3702 GN=MYB118 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.3e-48
Identity = 102/175 (58.29%), Postives = 126/175 (72.00%), Query Frame = 0


Query: 159 KNVNFSSLLRTSKGQKKPNVIKGQWTVEEDRVLVQLVEQYGTRKWSHIAQTLPGRIGKQC 218
           KN  F  + R  K  KK ++IKGQWT EED++LVQLV+ +GT+KWS IA+ L GR+GKQC
Sbjct: 169 KNKRF-QMRRICKPTKKASIIKGQWTPEEDKLLVQLVDLHGTKKWSQIAKMLQGRVGKQC 228

Query: 219 RERWHNHLRPDIKKDTWSEEEDRVLIEAHAEIGNKWAEIAKRLPGRTENSIKNHWNATKR 278
           RERWHNHLRPDIKKD W+EEED +LI+AH EIGN+WAEIA++LPGRTEN+IKNHWNATKR
Sbjct: 229 RERWHNHLRPDIKKDGWTEEEDIILIKAHKEIGNRWAEIARKLPGRTENTIKNHWNATKR 288

Query: 279 RQYSKRKCRSKYPRCSL----LQDYIKSLDSN-----TTRHQKKICPTDTKSKSK 325
           RQ+S+R         SL    LQ+YI+S+  N     T      I P + + K K
Sbjct: 289 RQHSRRTKGKDEISLSLGSNTLQNYIRSVTYNDDPFMTANANANIGPRNMRGKGK 342

[Close]

BLAST of CmaCh11G000930 vs. ExPASy Swiss-Prot
Match: Q9FIM4 (Transcription factor MYB119 OS=Arabidopsis thaliana OX=3702 GN=MYB119 PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.4e-48
Identity = 95/151 (62.91%), Postives = 114/151 (75.50%), Query Frame = 0


Query: 169 TSKGQKKPNVIKGQWTVEEDRVLVQLVEQYGTRKWSHIAQTLPGRIGKQCRERWHNHLRP 228
           ++K +   N+IKGQWT EEDR L++LV Q+G RKW+ I++ L GR GKQCRERWHNHLRP
Sbjct: 94  STKKRSSKNLIKGQWTAEEDRKLIRLVRQHGERKWAMISEKLEGRAGKQCRERWHNHLRP 153

Query: 229 DIKKDTWSEEEDRVLIEAHAEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCRS 288
           DIKKD WSEEE+RVL+E+H  IGNKWAEIAK +PGRTENSIKNHWNATKRRQ SKRK + 
Sbjct: 154 DIKKDGWSEEEERVLVESHMRIGNKWAEIAKLIPGRTENSIKNHWNATKRRQNSKRKHKR 213

Query: 289 K-------------YPRCSLLQDYIKSLDSN 307
           +               R  +LQDYIKS++ N
Sbjct: 214 ESNADNNDRDASPSAKRPCILQDYIKSIERN 244

[Close]

BLAST of CmaCh11G000930 vs. ExPASy Swiss-Prot
Match: Q9FY60 (Transcription factor MYB64 OS=Arabidopsis thaliana OX=3702 GN=MYB64 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.7e-47
Identity = 96/165 (58.18%), Postives = 120/165 (72.73%), Query Frame = 0


Query: 170 SKGQKKPNVIKGQWTVEEDRVLVQLVEQYGTRKWSHIAQTLPGRIGKQCRERWHNHLRPD 229
           +K Q   N+IKGQWT +EDR L++LV Q+G RKW+ I++ L GR GKQCRERWHNHLRPD
Sbjct: 95  TKKQPYKNIIKGQWTADEDRKLIKLVMQHGERKWAVISEKLEGRAGKQCRERWHNHLRPD 154

Query: 230 IKKDTWSEEEDRVLIEAHAEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCR-- 289
           IKKD+WSEEE+R+L+EAH  IGNKWAEIAK + GRTENSIKNHWNATKRRQ SKRK +  
Sbjct: 155 IKKDSWSEEEERLLVEAHTRIGNKWAEIAKLIQGRTENSIKNHWNATKRRQNSKRKHKRS 214

Query: 290 ---------------SKYPRCSLLQDYIKSLDSNTTRHQKKICPT 318
                          +K PR  +L+DYIK++++N   + + I  T
Sbjct: 215 KNADSNSDIDDLSPSAKRPR--ILEDYIKNIENNDKNNGENIMTT 257

[Close]

BLAST of CmaCh11G000930 vs. ExPASy Swiss-Prot
Match: Q1PDP9 (Transcription factor MYB115 OS=Arabidopsis thaliana OX=3702 GN=MYB115 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.7e-42
Identity = 93/209 (44.50%), Postives = 130/209 (62.20%), Query Frame = 0


Query: 101 SSGDYYNFHQMNQIDVTGLERNSIPLDFPDVKPVNFF-VPDEVSCITSGNGHFQKATMNK 160
           S G  YN H + +  + G   ++  L     +PV    V +        +      + ++
Sbjct: 78  SEGISYNMHDVQENTMCGYTAHNQGLIIGCHEPVLVHAVVESQQFNVPQSEDINLVSQSE 137

Query: 161 NVNFSSLLRTSKGQKKPNVIKGQWTVEEDRVLVQLVEQYGTRKWSHIAQTLPGRIGKQCR 220
            V    ++  +  +KK  + KGQWT  ED +LV++V+  GT+ W+ IA+   GR+GKQCR
Sbjct: 138 RVTEDKVMFKTDHKKKDIIGKGQWTPTEDELLVRMVKSKGTKNWTSIAKMFQGRVGKQCR 197

Query: 221 ERWHNHLRPDIKKDTWSEEEDRVLIEAHAEIGNKWAEIAKRLPGRTENSIKNHWNATKRR 280
           ERWHNHLRP+IKK+ WSEEED++LIE H  +GNKW EIAKRLPGR+EN +KNHWNATKRR
Sbjct: 198 ERWHNHLRPNIKKNDWSEEEDQILIEVHKIVGNKWTEIAKRLPGRSENIVKNHWNATKRR 257

Query: 281 QYSKRKCRSK--YPRCSLLQDYIKSLDSN 307
            +S R  RS    PR + L++YI+S+  N
Sbjct: 258 LHSVRTKRSDAFSPRNNALENYIRSITIN 286

[Close]

BLAST of CmaCh11G000930 vs. TAIR 10
Match: AT4G18770.1 (myb domain protein 98 )

HSP 1 Score: 299.7 bits (766), Expect = 4.0e-81
Identity = 183/420 (43.57%), Postives = 253/420 (60.24%), Query Frame = 0


Query: 5   SNLTENL--SSNQACKEDELSFQFL--ASKGNYLHEFHHLD-------------SSSNPI 64
           ++L +N+     +  KE++  F+ +  +   ++L +FHHLD             SSS+P+
Sbjct: 11  ASLNQNIFTRDQEHMKEEDFPFEVVDQSKPTSFLQDFHHLDHDHQFDHHHHHGSSSSHPL 70

Query: 65  LEDENMCSLDHFNPYSYGCSSNNSNTAVEDLYELNKACADQNGGCGQVMDNFQSSGDYYN 124
           L  +   S  +  P+ + CS   +   + D YE        N    Q ++N   + ++++
Sbjct: 71  LSVQTTSSCINNAPFEH-CSYQEN---MVDFYETKPNL--MNHHHFQAVENSYFTRNHHH 130

Query: 125 FHQMNQI----DVTGLERNS------IPLDFPDV---KPVNFFVPDEVSCITSGNGHFQK 184
             ++N +    D   LE+N+      IP D+P     KP+NF +PDE+SC+++ N  ++ 
Sbjct: 131 HQEINLVDEHDDPMDLEQNNMMMMRMIPFDYPPTETFKPMNFVMPDEISCVSADNDCYRA 190

Query: 185 ATMNKNVNF-------SSLLRTSKGQKKPNVIKGQWTVEEDRVLVQLVEQYGTRKWSHIA 244
            + NK   F       SS   + K  KK  ++KGQWT EEDRVL+QLVE+YG RKWSHIA
Sbjct: 191 TSFNKTKPFLTRKLSSSSSSSSWKETKKSTLVKGQWTAEEDRVLIQLVEKYGLRKWSHIA 250

Query: 245 QTLPGRIGKQCRERWHNHLRPDIKKDTWSEEEDRVLIEAHAEIGNKWAEIAKRLPGRTEN 304
           Q LPGRIGKQCRERWHNHLRPDIKK+TWSEEEDRVLIE H EIGNKWAEIAKRLPGRTEN
Sbjct: 251 QVLPGRIGKQCRERWHNHLRPDIKKETWSEEEDRVLIEFHKEIGNKWAEIAKRLPGRTEN 310

Query: 305 SIKNHWNATKRRQYSKRKCRSKYPRCSLLQDYIKSLD-----SNTTRHQKKICPTDTKSK 364
           SIKNHWNATKRRQ+SKRKCRSKYPR SLLQDYIKSL+     +++   + +   ++ K K
Sbjct: 311 SIKNHWNATKRRQFSKRKCRSKYPRPSLLQDYIKSLNMGALMASSVPARGRRRESNNKKK 370

Query: 365 SKLADRRHRQPQSANFCPNDWTVPNSDLKDEAEFYLDDNFFREGCSIDTLMENIAAASAD 383
             +     ++ +   +   D  VP     D  +F  ++    EGCSID+L+++I     D
Sbjct: 371 DVVVAVEEKKKEEEVY-GQDRIVPECVFTD--DFGFNEKLLEEGCSIDSLLDDIPQPDID 421

[Close]

BLAST of CmaCh11G000930 vs. TAIR 10
Match: AT3G27785.1 (myb domain protein 118 )

HSP 1 Score: 194.1 bits (492), Expect = 2.4e-49
Identity = 102/175 (58.29%), Postives = 126/175 (72.00%), Query Frame = 0


Query: 159 KNVNFSSLLRTSKGQKKPNVIKGQWTVEEDRVLVQLVEQYGTRKWSHIAQTLPGRIGKQC 218
           KN  F  + R  K  KK ++IKGQWT EED++LVQLV+ +GT+KWS IA+ L GR+GKQC
Sbjct: 169 KNKRF-QMRRICKPTKKASIIKGQWTPEEDKLLVQLVDLHGTKKWSQIAKMLQGRVGKQC 228

Query: 219 RERWHNHLRPDIKKDTWSEEEDRVLIEAHAEIGNKWAEIAKRLPGRTENSIKNHWNATKR 278
           RERWHNHLRPDIKKD W+EEED +LI+AH EIGN+WAEIA++LPGRTEN+IKNHWNATKR
Sbjct: 229 RERWHNHLRPDIKKDGWTEEEDIILIKAHKEIGNRWAEIARKLPGRTENTIKNHWNATKR 288

Query: 279 RQYSKRKCRSKYPRCSL----LQDYIKSLDSN-----TTRHQKKICPTDTKSKSK 325
           RQ+S+R         SL    LQ+YI+S+  N     T      I P + + K K
Sbjct: 289 RQHSRRTKGKDEISLSLGSNTLQNYIRSVTYNDDPFMTANANANIGPRNMRGKGK 342

[Close]

BLAST of CmaCh11G000930 vs. TAIR 10
Match: AT5G58850.1 (myb domain protein 119 )

HSP 1 Score: 193.7 bits (491), Expect = 3.1e-49
Identity = 95/151 (62.91%), Postives = 114/151 (75.50%), Query Frame = 0


Query: 169 TSKGQKKPNVIKGQWTVEEDRVLVQLVEQYGTRKWSHIAQTLPGRIGKQCRERWHNHLRP 228
           ++K +   N+IKGQWT EEDR L++LV Q+G RKW+ I++ L GR GKQCRERWHNHLRP
Sbjct: 94  STKKRSSKNLIKGQWTAEEDRKLIRLVRQHGERKWAMISEKLEGRAGKQCRERWHNHLRP 153

Query: 229 DIKKDTWSEEEDRVLIEAHAEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCRS 288
           DIKKD WSEEE+RVL+E+H  IGNKWAEIAK +PGRTENSIKNHWNATKRRQ SKRK + 
Sbjct: 154 DIKKDGWSEEEERVLVESHMRIGNKWAEIAKLIPGRTENSIKNHWNATKRRQNSKRKHKR 213

Query: 289 K-------------YPRCSLLQDYIKSLDSN 307
           +               R  +LQDYIKS++ N
Sbjct: 214 ESNADNNDRDASPSAKRPCILQDYIKSIERN 244

[Close]

BLAST of CmaCh11G000930 vs. TAIR 10
Match: AT5G11050.1 (myb domain protein 64 )

HSP 1 Score: 190.7 bits (483), Expect = 2.6e-48
Identity = 96/165 (58.18%), Postives = 120/165 (72.73%), Query Frame = 0


Query: 170 SKGQKKPNVIKGQWTVEEDRVLVQLVEQYGTRKWSHIAQTLPGRIGKQCRERWHNHLRPD 229
           +K Q   N+IKGQWT +EDR L++LV Q+G RKW+ I++ L GR GKQCRERWHNHLRPD
Sbjct: 95  TKKQPYKNIIKGQWTADEDRKLIKLVMQHGERKWAVISEKLEGRAGKQCRERWHNHLRPD 154

Query: 230 IKKDTWSEEEDRVLIEAHAEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCR-- 289
           IKKD+WSEEE+R+L+EAH  IGNKWAEIAK + GRTENSIKNHWNATKRRQ SKRK +  
Sbjct: 155 IKKDSWSEEEERLLVEAHTRIGNKWAEIAKLIQGRTENSIKNHWNATKRRQNSKRKHKRS 214

Query: 290 ---------------SKYPRCSLLQDYIKSLDSNTTRHQKKICPT 318
                          +K PR  +L+DYIK++++N   + + I  T
Sbjct: 215 KNADSNSDIDDLSPSAKRPR--ILEDYIKNIENNDKNNGENIMTT 257

[Close]

BLAST of CmaCh11G000930 vs. TAIR 10
Match: AT5G40360.1 (myb domain protein 115 )

HSP 1 Score: 174.5 bits (441), Expect = 1.9e-43
Identity = 93/209 (44.50%), Postives = 130/209 (62.20%), Query Frame = 0


Query: 101 SSGDYYNFHQMNQIDVTGLERNSIPLDFPDVKPVNFF-VPDEVSCITSGNGHFQKATMNK 160
           S G  YN H + +  + G   ++  L     +PV    V +        +      + ++
Sbjct: 78  SEGISYNMHDVQENTMCGYTAHNQGLIIGCHEPVLVHAVVESQQFNVPQSEDINLVSQSE 137

Query: 161 NVNFSSLLRTSKGQKKPNVIKGQWTVEEDRVLVQLVEQYGTRKWSHIAQTLPGRIGKQCR 220
            V    ++  +  +KK  + KGQWT  ED +LV++V+  GT+ W+ IA+   GR+GKQCR
Sbjct: 138 RVTEDKVMFKTDHKKKDIIGKGQWTPTEDELLVRMVKSKGTKNWTSIAKMFQGRVGKQCR 197

Query: 221 ERWHNHLRPDIKKDTWSEEEDRVLIEAHAEIGNKWAEIAKRLPGRTENSIKNHWNATKRR 280
           ERWHNHLRP+IKK+ WSEEED++LIE H  +GNKW EIAKRLPGR+EN +KNHWNATKRR
Sbjct: 198 ERWHNHLRPNIKKNDWSEEEDQILIEVHKIVGNKWTEIAKRLPGRSENIVKNHWNATKRR 257

Query: 281 QYSKRKCRSK--YPRCSLLQDYIKSLDSN 307
            +S R  RS    PR + L++YI+S+  N
Sbjct: 258 LHSVRTKRSDAFSPRNNALENYIRSITIN 286

The following BLAST results are available for this feature:

BLAST of CmaCh11G000930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7L2	5.6e-80	43.57	Transcription factor MYB98 OS=Arabidopsis thaliana OX=3702 GN=MYB98 PE=2 SV=1	[more]
Q9LVW4	3.3e-48	58.29	Transcription factor MYB118 OS=Arabidopsis thaliana OX=3702 GN=MYB118 PE=2 SV=1	[more]
Q9FIM4	4.4e-48	62.91	Transcription factor MYB119 OS=Arabidopsis thaliana OX=3702 GN=MYB119 PE=2 SV=1	[more]
Q9FY60	3.7e-47	58.18	Transcription factor MYB64 OS=Arabidopsis thaliana OX=3702 GN=MYB64 PE=2 SV=1	[more]
Q1PDP9	2.7e-42	44.50	Transcription factor MYB115 OS=Arabidopsis thaliana OX=3702 GN=MYB115 PE=2 SV=1	[more]

BLAST of CmaCh11G000930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18770.1	4.0e-81	43.57	myb domain protein 98	[more]
AT3G27785.1	2.4e-49	58.29	myb domain protein 118	[more]
AT5G58850.1	3.1e-49	62.91	myb domain protein 119	[more]
AT5G11050.1	2.6e-48	58.18	myb domain protein 64	[more]
AT5G40360.1	1.9e-43	44.50	myb domain protein 115	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 231..279 e-value: 6.5E-17 score: 72.2 coord: 179..228 e-value: 3.9E-16 score: 69.6
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 175..226 score: 13.297606
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 227..277 score: 11.47446
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 183..226 e-value: 2.07638E-14 score: 65.2894
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 234..277 e-value: 9.78218E-13 score: 60.2818
None	No IPR available	GENE3D	1.10.10.60		coord: 233..285 e-value: 1.3E-19 score: 71.7
None	No IPR available	GENE3D	1.10.10.60		coord: 179..231 e-value: 9.6E-25 score: 88.3
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 183..240 e-value: 2.0E-19 score: 69.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 311..340
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 311..331
None	No IPR available	PANTHER	PTHR45614:SF180	BNAC03G62830D PROTEIN	coord: 105..304
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 105..304
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 231..281 score: 24.181919
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 175..230 score: 31.690889
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 177..273

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G000930.1	CmaCh11G000930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding