CmaCh11G000330 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G000330
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Purple acid phosphatase
Location	Cma_Chr11: 150421 .. 155075 (+)
RNA-Seq Expression	CmaCh11G000330
Synteny	CmaCh11G000330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGTCTCCAGTAGAGCCTCGCCGCTTGTTCTTGGCCTGTACGTAAGTATCTCTACTCAGTTGCATTCTCATGCCGTCTTCTGTTGTTTATTATGCAATTGCTAACTTCTGTATGATTTTGCTTAGTTCGGTATTTAAGAATATTCTTCTTACTTTCTGTGCTGACTAATATTTCCTTCAGTCAGTTTAGTTTTTACTTGTATGAATTCGGAAAGCGTGGTTCTAGATTCTTACCCTGTACTCTTCTCGTTTGATTTTTCATCTGCATCGTCATGGAGTGGTTACTGAACTGCAGTTACCAGATTATATATTATTTCTGGATATTTCAACTCTCTCGATTAAAATGTTTGCTTATTTGTTGATTCTGTTTCAATTTAATGTTTCCTGGACGAGAAAGCTGGGGATGCAAGTTGCTTAGTTATTCACTGGTTCTTTCCGTGATTCTTTGTACTTTCTGTGTTGATTTCATATTTCCTTCAACAGTTCAAGTTGCGTGTATGAATTTAGAAAATACAGTCCTGAACGGCACTTTTCTTCACATCTGATTTTCCTTCTGCATCGTTACGGAGTGTTACTGATCTGCAGTAGCCGGATTATGCTTTGCCGATATATTCTACTGATCTGCAGTAGCTGGATACCGGAGTTGCTTAACTATTAGTTGATTTTAAGTTGCTCCTTGCTCTCTACGTTGACTTGTATAACATTTCTTCCGTCATTTCAGTTTGCTTGTTTAGTTCAGAAAATATGGTCCTAACTGGCACTTCTCTTCGTATTTGATTTTCTATCGGCATCGTGGATTGTGCTTTTCCTAGATAGTGTAATTTTCACTATGAGTTTTTGTTTATTTGTTTATTCGGTTTAAATGTATATTTTCAGGTCGAGGATACCGAGCGGGGGATTGGATAGCAGTGTTTTCTCCTGCGATGTTCAAGTATGTGACATATTCTTATTCCATGATTTAGTATACAAAAAACTTGTATTGTGCATCTTTTTAAGTAAAAATTAAGTTATAAATGTTCGTCTTTAGAATTTTTAGCTTTAAATCAATGATAATGATCTCGTTATGATGGTGAAAATTGTTACAAGTCGTAAAAGAACTCTGTTTCTTTGTGGCAGCTCATCAGCCTGTCCTAGTTCAAATAATAGGGTTCAAACTCCATTCATCAGTCTGTCATAGTTCAGAATTTAACTAGTAACATCAACTTTGACGTGAATGCCAAATATATGCCTTTATAATGCTTGAAATGAAATAATGATACGAATTTCTTCTCCAAATAATCTATTTTCAGTTCAATTATGCAAAGTACTCAAATCCAAACTAATTTGAACAAACTCCTTGTATTTCCTTTCATTTTATTGTGGGAAAGCTTTTATAGAGGTTACTAAAAGAAGTCAATAATGAACCACAGTCCTAGAACTTCTTGTCCTAATCTGATTTCCTTTAGTGACCTTAAAACTATATAAAATGTCAATTAATTGGCTACTCATTGCTAACTTGTGTTAACAAATGTCTTCAAAATTGACACTCCTATTTGCTGCCAACATATGTGAGAAAAATACATGTTCTATAGTTGTTAGCAAGATTTAAGTAGCTTAGCGGCAGAACAATGGAATTCTTTTCATTTTTGCAGACGACAGTAACCTGGACAAGCGGGTACGATAAAAATGAAGCTATTTCTTTCGTTAAATGGGGTCTAGAAGGAGAGATACAGACGAAATCTCCAGCATTTAGTAGGAACAGCATAAGTGGTATGATTATTTCGATCAACTCATCAGTCTAGATTGCACCTTCTTGTTTAACAACTTAATATTATTGAAAAAAAAAAAAATATAAGCTGTTAGTTGAATGAAACTGTTTAGTCCTTAATTTTAAACCTTTAATGGAAGACTGTTTCAAAAAGGTTCAACTGATAACTTCCGCTTGTATGTGTGTATTTACTGTTCACTTGCAGTTTGATTTTAGTTCATTTTTAATATCAAACAATTGCAAATAACGCAAGTTCATCAGAGAATTAATTTGTCATGATCGACCCATTAGATCACCTTGCTGCAAGTCACTCTAGGTATTTATGTTGCTGCCACGTCAAAAAATTTCTGCTTCCATTCTGTAATTTACTTAGAACCAGAGGCTATGCCTTATTAGTCAACTTGTCAAAATCTGAATTTCTCATCCTTGTCCTTGAGCTTTCGGCTTACTCACCTAGAAATGGCAGTTCCATCTAAGTGGCTTCGTAGAGCACTTACAATGGCTTTCTTTCACTATCTCATTAAGACATGAATATTTACAGTTCTTTTAGAAAGGTAGTTAGACGACTTTTCAGAATGGATCGATGACTTTCTTCGATTCTAGTTGTGAGATATTTACGCCGCAAAACGTAGTGTGGTTCCTCTTTTATTCTGACAAAACACTGGCTTGACATTTATTTATTTATTTTTTATATTTTTTAATATTTAAGATGCACCTGCACGCACTGTTGATTGGCGTAATATACTAGTTTCTTTAATACTTGTTTCCTACCAAGTTTATGGCCAAACGCTGTTTGTTTCAATCATGCACTCTAACGATTTGACACGTTGGTTTCCGCAGGTACACGTACAGAACCGATCATAGCTTGTTTAATCGGTCATATAATTGGACCAAGAGCCATTCATTCAAGTCATCACCGCGTCCTGAAGAAGAATCATTACAACGTGTCATTATATTTGGTAATATGGGGCAGGTACCATAACGTATTTAATTACACTGATTACACTCAAATGAGAATGGAGTCTATAATTCATAAGGAAAATGTTGAAATTGAACTAAGTGAAACTTCTGAACTGAAGTTAATTAACTTAATTCAGTCACCTCTTCGTGGCCTTTGTTTATTTCTTGTATTGACTTGATAATTCTCTATATTCTTGAGAGGATGTTCTACAACTGCTTTCATATTTGAGCTCCTTGAGGGGCAATTAACAATTCAAAGAAAATTGGTTATCATATAAAGCATTGACAAGGAACATCATTGTTCTGCCATTTCATTTGCCATTGTTTGAATAGTTACTGTAACATACATATAAAAGAAAAGATATAACATCCAAGCCTGAAAATAAGAACTTAAAATTCACTTCCAGGCCGTTCTAGAGTCGCTAACGTACTGCTTGTGGTAATCATGACTTTCAGGGACAACGTGAAGGCCCAAATGAGTAAAGCAACTATCAGCCTGGAGCATTGGGCACAACCGACTAGCTCATCAAAGACATAAAACACTAGTGACACTGTCTTTCATATCGGAGATCTATTTTTATGCAGATGGGTACCTCACAGAGTGGTAACAAGTACTGCACTGGTGGAGCCCATTGCATCTAGGGTCCCCAACATGGCTGCAAGGTTATCAATATCAGTGACTCGATTGTTTCTAAGACTGGTTTTTGGACCATTTACTTTTATGAATCTTGAGCCTCTCCCATTTCACTCCTGCAGTGGTAACCATGAGCGTGGCTGACCAATTACCGGGTCCTTCTACGCAAACATGGATTCAGGTGGGGAGAGTGTGGAGTCCGCCGGTGGAGGCCGCCGGTGGAGGCCGTGTTCTATTCTCCTGAACAGAGCAAATTTCTGGTATGTTAAGAATTCTTTTAAGCAATTCCATGAATCTATTCCACTGCTGAGGTTTATTTTTGCTTCATTAATAAACTGTGCACTTGTTTTGCTCGTGGATCCATTCATTTTAGATTTTACTTAAACTAATGCCTTTTTTGTTTGGGTTTTGAAAAATTATGCTGGCTTCTTTGCAATTTCTTTTCTATGGGTTTTATCATACATAATATTGAAATATTTATCCAGACTAAATTTGAAAATTATCATATATATATATATATATATATATATATTTTAACTTTTTAAACATGGTTTGAATTTTTAAACATTTTTAGAAAGTAGAGGTAAGTAACAGAGCAAAAAAAATCCCATAAGTGGAGTATGTTTATAAACTAAAAATTTGAAAACCAAATGACACCACCATATCAAATAAAGCCTAAAATAGTTAGTTTCATTATTATTCTGTCATTTTATGTGCAGGGCGCCTGAATAATTTTAGATGGCAAGAAATGACGATAGTTTTATGAACTTTTTTGACTGATTATCAAAACGAACTATATCGCTCGACATTTCTTGCCATCAATAAATTTTTTCATTGTGAATGAAGTTTGTCTAGCCCGTTTTTTAAAACCATATTTGAGCACTTCTTTTAATATCTCTCGCGATTACAAGTTGGGAAGCATATCATCCATCTTTGACCAGGCAAACCCCTTTTGATCAAGTCGTCCCAAACCATTTTCCAAATATGTTTTCAAAAATGATTTAGAATGAGTTAGAATTTGATTCTTAGTTTTCTATTTCAAAGCTTCCAACTTATTAGCCAAAGACCTCATTAACTTATAAGGTCTTACAGTTGTGTCTAATGTTTATTTATTAACATTAGTTTTTTATGTTGTAGATCGGGGCACTAAAAATGGCGCAATTCATGTGGCTGTCCGTGGAGAAAGGAGCCCCGCTTATTCTCCCATTCACCCAAGCAATCCCCAGATGGGAGTCTTCACATACACCAGGATTTTGGAATCGTGAAGTCTACAGCATTCAACCGCTCTTCCCTGCTTTTCGATTTCAAAAAC

mRNA sequence

ATGCGGTCTCCAGTAGAGCCTCGCCGCTTGTTCTTGGCCTGTACGTCGAGGATACCGAGCGGGGGATTGGATAGCAGTGTTTTCTCCTGCGATGTTCAAACGACAGTAACCTGGACAAGCGGGTACGATAAAAATGAAGCTATTTCTTTCGTTAAATGGGGTCTAGAAGGAGAGATACAGACGAAATCTCCAGCATTTAGTAGGAACAGCATAAGTGGTACACGTACAGAACCGATCATAGCTTGTTTAATCGGTCATATAATTGGACCAAGAGCCATTCATTCAAGTCATCACCGCGTCCTGAAGAAGAATCATTACAACGTGTCATTATATTTGGTAATATGGGGCAGGGACAACGTGAAGGCCCAAATGAGTAAAGCAACTATCAGCCTGGAGCATTGGGCACAACCGACTAGCTCATCAAAGACATAAAACACTAGTGACACTGTCTTTCATATCGGAGATCTATTTTTATGCAGATGGGTACCTCACAGAGTGGTAACAAGTACTGCACTGGTGGAGCCCATTGCATCTAGGGTCCCCAACATGGCTGCAAGTGGTAACCATGAGCGTGGCTGACCAATTACCGGGTCCTTCTACGCAAACATGGATTCAGGTGGGGAGAGTGTGGAGTCCGCCGGTGGAGGCCGCCGGTGGAGGCCGTGTTCTATTCTCCTGAACAGAGCAAATTTCTGATCGGGGCACTAAAAATGGCGCAATTCATGTGGCTGTCCGTGGAGAAAGGAGCCCCGCTTATTCTCCCATTCACCCAAGCAATCCCCAGATGGGAGTCTTCACATACACCAGGATTTTGGAATCGTGAAGTCTACAGCATTCAACCGCTCTTCCCTGCTTTTCGATTTCAAAAAC

Coding sequence (CDS)

ATGCGGTCTCCAGTAGAGCCTCGCCGCTTGTTCTTGGCCTGTACGTCGAGGATACCGAGCGGGGGATTGGATAGCAGTGTTTTCTCCTGCGATGTTCAAACGACAGTAACCTGGACAAGCGGGTACGATAAAAATGAAGCTATTTCTTTCGTTAAATGGGGTCTAGAAGGAGAGATACAGACGAAATCTCCAGCATTTAGTAGGAACAGCATAAGTGGTACACGTACAGAACCGATCATAGCTTGTTTAATCGGTCATATAATTGGACCAAGAGCCATTCATTCAAGTCATCACCGCGTCCTGAAGAAGAATCATTACAACGTGTCATTATATTTGGTAATATGGGGCAGGGACAACGTGAAGGCCCAAATGAGTAAAGCAACTATCAGCCTGGAGCATTGGGCACAACCGACTAGCTCATCAAAGACATAA

Protein sequence

MRSPVEPRRLFLACTSRIPSGGLDSSVFSCDVQTTVTWTSGYDKNEAISFVKWGLEGEIQTKSPAFSRNSISGTRTEPIIACLIGHIIGPRAIHSSHHRVLKKNHYNVSLYLVIWGRDNVKAQMSKATISLEHWAQPTSSSKT

Homology

[Close]

BLAST of CmaCh11G000330 vs. ExPASy Swiss-Prot
Match: Q5MAU8 (Probable inactive purple acid phosphatase 27 OS=Arabidopsis thaliana OX=3702 GN=PAP27 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.1e-04
Identity = 22/45 (48.89%), Postives = 30/45 (66.67%), Query Frame = 0


Query: 33  QTTVTWTSGYDKNEAISFVKWGLEGEIQTKSPA----FSRNSISG 74
           + TVTWTSGY+  EA+ FV+W  +G    +SPA    F+RNS+ G
Sbjct: 181 EMTVTWTSGYNIGEAVPFVEWSRKGTRSRRSPAGTLTFTRNSMCG 225

[Close]

BLAST of CmaCh11G000330 vs. ExPASy Swiss-Prot
Match: Q8H1R2 (Probable inactive purple acid phosphatase 24 OS=Arabidopsis thaliana OX=3702 GN=PAP24 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.6e-04
Identity = 21/45 (46.67%), Postives = 31/45 (68.89%), Query Frame = 0


Query: 33  QTTVTWTSGYDKNEAISFVKWGLEGEIQTKSPA----FSRNSISG 74
           + TVTWTSGY+ +EA+ F++W  +G    +SPA    F+RNS+ G
Sbjct: 185 EMTVTWTSGYNIDEAVPFIEWSAKGLPARRSPAGTLTFNRNSMCG 229

[Close]

BLAST of CmaCh11G000330 vs. TAIR 10
Match: AT5G50400.1 (purple acid phosphatase 27 )

HSP 1 Score: 47.0 bits (110), Expect = 1.5e-05
Identity = 22/45 (48.89%), Postives = 30/45 (66.67%), Query Frame = 0


Query: 33  QTTVTWTSGYDKNEAISFVKWGLEGEIQTKSPA----FSRNSISG 74
           + TVTWTSGY+  EA+ FV+W  +G    +SPA    F+RNS+ G
Sbjct: 181 EMTVTWTSGYNIGEAVPFVEWSRKGTRSRRSPAGTLTFTRNSMCG 225

[Close]

BLAST of CmaCh11G000330 vs. TAIR 10
Match: AT4G24890.1 (purple acid phosphatase 24 )

HSP 1 Score: 46.2 bits (108), Expect = 2.5e-05
Identity = 21/45 (46.67%), Postives = 31/45 (68.89%), Query Frame = 0


Query: 33  QTTVTWTSGYDKNEAISFVKWGLEGEIQTKSPA----FSRNSISG 74
           + TVTWTSGY+ +EA+ F++W  +G    +SPA    F+RNS+ G
Sbjct: 185 EMTVTWTSGYNIDEAVPFIEWSAKGLPARRSPAGTLTFNRNSMCG 229

[Close]

BLAST of CmaCh11G000330 vs. TAIR 10
Match: AT1G13750.1 (Purple acid phosphatases superfamily protein )

HSP 1 Score: 42.7 bits (99), Expect = 2.8e-04
Identity = 22/45 (48.89%), Postives = 29/45 (64.44%), Query Frame = 0


Query: 33  QTTVTWTSGYDKNEAISFVKWGLEGEIQTKSPA----FSRNSISG 74
           + TVTWTSGY  N A   V+WG++G  +  SPA    F+RNS+ G
Sbjct: 183 EMTVTWTSGYGLNLAEPVVEWGVKGGERKLSPAGTLTFARNSMCG 227

The following BLAST results are available for this feature:

BLAST of CmaCh11G000330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5MAU8	2.1e-04	48.89	Probable inactive purple acid phosphatase 27 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q8H1R2	3.6e-04	46.67	Probable inactive purple acid phosphatase 24 OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of CmaCh11G000330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50400.1	1.5e-05	48.89	purple acid phosphatase 27	[more]
AT4G24890.1	2.5e-05	46.67	purple acid phosphatase 24	[more]
AT1G13750.1	2.8e-04	48.89	Purple acid phosphatases superfamily protein	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G000330.1	CmaCh11G000330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016311	dephosphorylation
molecular_function	GO:0003993	acid phosphatase activity
molecular_function	GO:0046872	metal ion binding