CmaCh10G010870 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh10G010870
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
Location	Cma_Chr10: 7162689 .. 7163103 (+)
RNA-Seq Expression	CmaCh10G010870
Synteny	CmaCh10G010870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAATCTATAGGGTTTGTTATTTTTCGTCTTCTTCCTTAGCAAAATGGTGGAGATTACCTTTTGATTTACCAGAAGCAAAAGAAGAATTAGTAGCGGGTTATCAAACCGAGTATTCAAGTATCAGATTTGGTTGATTATATCTTGCTTCCTATCTAAATCTATTAGTTTCTTCGTTATTCAGTTCTTTACTTGGGTGATTGGGATATCTCTATTCCATATTACGTTATGAACTTTTTGAAATAAATAAAGCGTATTCCGTCAATCTTTGGAATGACAATTAGTATCTTTATTAGATTAACTAAAACTTATTTGTTCTTGTTCATTTCTATAGCAACAAGATGGACTTTACCCCGACTAAGAATAGACCAACTATTCAATCTCCGATGGAAATTTCTTTTACCTATATCTCTC

mRNA sequence

ATGTCAATCTATAGGGTTTGTTATTTTTCGTCTTCTTCCTTAGCAAAATGGTGGAGATTACCTTTTGATTTACCAGAAGCAAAAGAAGAATTAGTAGCGGGTTATCAAACCGAGTATTCAATTCTTTACTTGGGTGATTGGGATATCTCTATTCCATATTACCGTATTCCGTCAATCTTTGGAATGACAATTAGTATCTTTATTAGATTAACTAAAACTTATTTGTTCTTGTTCATTTCTATAGCAACAAGATGGACTTTACCCCGACTAAGAATAGACCAACTATTCAATCTCCGATGGAAATTTCTTTTACCTATATCTCTC

Coding sequence (CDS)

ATGTCAATCTATAGGGTTTGTTATTTTTCGTCTTCTTCCTTAGCAAAATGGTGGAGATTACCTTTTGATTTACCAGAAGCAAAAGAAGAATTAGTAGCGGGTTATCAAACCGAGTATTCAATTCTTTACTTGGGTGATTGGGATATCTCTATTCCATATTACCGTATTCCGTCAATCTTTGGAATGACAATTAGTATCTTTATTAGATTAACTAAAACTTATTTGTTCTTGTTCATTTCTATAGCAACAAGATGGACTTTACCCCGACTAAGAATAGACCAACTATTCAATCTCCGATGGAAATTTCTTTTACCTATATCTCTC

Protein sequence

MSIYRVCYFSSSSLAKWWRLPFDLPEAKEELVAGYQTEYSILYLGDWDISIPYYRIPSIFGMTISIFIRLTKTYLFLFISIATRWTLPRLRIDQLFNLRWKFLLPISL

Homology

[Close]

BLAST of CmaCh10G010870 vs. ExPASy Swiss-Prot
Match: Q2QD36 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhA PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.8e-33
Identity = 82/132 (62.12%), Postives = 88/132 (66.67%), Query Frame = 0


Query: 9   FSSSSLAKWWRLPFDLPEAKEELVAGYQTEYS-----------------------ILYLG 68
           F  SSLA+  RLPFDLPEA+EELVAGYQTEYS                       +LYLG
Sbjct: 218 FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLG 277

Query: 69  DWDISIPYY---------RIPSIFGMTISIFIRLTKTYLFLFISIATRWTLPRLRIDQLF 109
            WDISIPY          ++  +FGMTISIFI L KTYLFLFISIATRWTLPRLRIDQL 
Sbjct: 278 GWDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLL 337

[Close]

BLAST of CmaCh10G010870 vs. ExPASy Swiss-Prot
Match: A4QK75 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Arabis hirsuta OX=78191 GN=ndhA PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 6.8e-32
Identity = 81/134 (60.45%), Postives = 86/134 (64.18%), Query Frame = 0


Query: 9   FSSSSLAKWWRLPFDLPEAKEELVAGYQTEYS-----------------------ILYLG 68
           F  SSLA+  RLPFDLPEA+EEL+AGYQTEYS                       ILYLG
Sbjct: 218 FLISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYINLLISSLFVTILYLG 277

Query: 69  DWDISIPYYRIP-----------SIFGMTISIFIRLTKTYLFLFISIATRWTLPRLRIDQ 109
            W+ISIPY  IP            IFG TI IFI L KTYLFLFISIATRWTLPRLR+DQ
Sbjct: 278 GWNISIPYISIPYISILELFERDPIFGTTIGIFITLAKTYLFLFISIATRWTLPRLRMDQ 337

[Close]

BLAST of CmaCh10G010870 vs. ExPASy Swiss-Prot
Match: Q3V4X9 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Acorus calamus OX=4465 GN=ndhA PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.5e-31
Identity = 80/132 (60.61%), Postives = 85/132 (64.39%), Query Frame = 0


Query: 9   FSSSSLAKWWRLPFDLPEAKEELVAGYQTEYS-----------------------ILYLG 68
           F  SSLA+  RLPFDLPEA+EELVAGYQTEYS                       +LYLG
Sbjct: 220 FLVSSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLG 279

Query: 69  DWDISIPYYRIP---------SIFGMTISIFIRLTKTYLFLFISIATRWTLPRLRIDQLF 109
            W++SIPY  IP          IFGMTI I I L K YLFLFISIATRWTLPRLRIDQL 
Sbjct: 280 GWNLSIPYIFIPELFGKNKTGGIFGMTIGILITLAKAYLFLFISIATRWTLPRLRIDQLL 339

[Close]

BLAST of CmaCh10G010870 vs. ExPASy Swiss-Prot
Match: A4QKG2 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Barbarea verna OX=50458 GN=ndhA PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.5e-31
Identity = 79/129 (61.24%), Postives = 85/129 (65.89%), Query Frame = 0


Query: 9   FSSSSLAKWWRLPFDLPEAKEELVAGYQTEYS-----------------------ILYLG 68
           F  SSLA+  RLPFDLPEA+EEL+AGYQTEYS                       +LYLG
Sbjct: 218 FLISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLG 277

Query: 69  DWDISIPYYRI------PSIFGMTISIFIRLTKTYLFLFISIATRWTLPRLRIDQLFNLR 109
            W+ISIPY  I        IFG TI IFI L KTYLFLFISIATRWTLPRLR+DQL NL 
Sbjct: 278 GWNISIPYISILELFQRDQIFGTTIGIFITLAKTYLFLFISIATRWTLPRLRMDQLLNLG 337

[Close]

BLAST of CmaCh10G010870 vs. ExPASy Swiss-Prot
Match: A4QKY9 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Crucihimalaya wallichii OX=78192 GN=ndhA PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.5e-31
Identity = 79/129 (61.24%), Postives = 85/129 (65.89%), Query Frame = 0


Query: 9   FSSSSLAKWWRLPFDLPEAKEELVAGYQTEYS-----------------------ILYLG 68
           F  SSLA+  RLPFDLPEA+EEL+AGYQTEYS                       +LYLG
Sbjct: 218 FLISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLG 277

Query: 69  DWDISIPYYRI------PSIFGMTISIFIRLTKTYLFLFISIATRWTLPRLRIDQLFNLR 109
            W+ISIPY  I        IFG TI IFI L KTYLFLFISIATRWTLPRLR+DQL NL 
Sbjct: 278 GWNISIPYISILELFQRDQIFGTTIGIFITLAKTYLFLFISIATRWTLPRLRMDQLLNLG 337

[Close]

BLAST of CmaCh10G010870 vs. ExPASy TrEMBL
Match: A0A4Y7IXU2 (Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_021002 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.6e-31
Identity = 74/108 (68.52%), Postives = 84/108 (77.78%), Query Frame = 0


Query: 9   FSSSSLAKWWRLPFDLPEAKEELVAGYQTEYSILYLGDWDISIPYYRIP--------SIF 68
           F  SSLA+  RLPFDLPEA+EELVAGYQTEYS+LYLG W++S+PY  +P         +F
Sbjct: 63  FVISSLAECERLPFDLPEAEEELVAGYQTEYSVLYLGGWNLSLPYIFLPHFEISEVGGVF 122

Query: 69  GMTISIFIRLTKTYLFLFISIATRWTLPRLRIDQLFNLRWKFLLPISL 109
           GMTI IFI L K YLFLFI I TRWTLPR+R+DQL NL WKFLLPISL
Sbjct: 123 GMTIGIFITLAKAYLFLFIPITTRWTLPRMRMDQLLNLGWKFLLPISL 170

[Close]

BLAST of CmaCh10G010870 vs. ExPASy TrEMBL
Match: A0A4Y7JV54 (Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_025677 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 6.0e-31
Identity = 73/108 (67.59%), Postives = 83/108 (76.85%), Query Frame = 0


Query: 9   FSSSSLAKWWRLPFDLPEAKEELVAGYQTEYSILYLGDWDISIPYYRIP--------SIF 68
           F  SSLA+  RLPFDLPEA+EELVAGYQTEYS+LYLG W++S+PY  +P         +F
Sbjct: 190 FVISSLAECERLPFDLPEAEEELVAGYQTEYSVLYLGGWNLSLPYIFLPHFEISEVGGVF 249

Query: 69  GMTISIFIRLTKTYLFLFISIATRWTLPRLRIDQLFNLRWKFLLPISL 109
           GMTI IFI L K YLFLFI I TRWTLPR+R+DQL NL WKFLLPI L
Sbjct: 250 GMTIGIFITLAKAYLFLFIPITTRWTLPRMRMDQLLNLGWKFLLPICL 297

[Close]

BLAST of CmaCh10G010870 vs. ExPASy TrEMBL
Match: A0A218KGA1 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=ndhA PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.0e-30
Identity = 82/132 (62.12%), Postives = 88/132 (66.67%), Query Frame = 0


Query: 9   FSSSSLAKWWRLPFDLPEAKEELVAGYQTEYS-----------------------ILYLG 68
           F  SSLA+  RLPFDLPEA+EELVAGYQTEYS                       +LYLG
Sbjct: 218 FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLG 277

Query: 69  DWDISIPYY---------RIPSIFGMTISIFIRLTKTYLFLFISIATRWTLPRLRIDQLF 109
            WDISIPY          ++  +FGMTISIFI L KTYLFLFISIATRWTLPRLRIDQL 
Sbjct: 278 GWDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLL 337

[Close]

BLAST of CmaCh10G010870 vs. ExPASy TrEMBL
Match: A0A1X9Q1Y4 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhA PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.0e-30
Identity = 82/132 (62.12%), Postives = 88/132 (66.67%), Query Frame = 0


Query: 9   FSSSSLAKWWRLPFDLPEAKEELVAGYQTEYS-----------------------ILYLG 68
           F  SSLA+  RLPFDLPEA+EELVAGYQTEYS                       +LYLG
Sbjct: 218 FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLG 277

Query: 69  DWDISIPYY---------RIPSIFGMTISIFIRLTKTYLFLFISIATRWTLPRLRIDQLF 109
            WDISIPY          ++  +FGMTISIFI L KTYLFLFISIATRWTLPRLRIDQL 
Sbjct: 278 GWDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLL 337

[Close]

BLAST of CmaCh10G010870 vs. ExPASy TrEMBL
Match: A0A1S4EU64 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis melo OX=3656 GN=ndhA PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.0e-30
Identity = 82/132 (62.12%), Postives = 88/132 (66.67%), Query Frame = 0


Query: 9   FSSSSLAKWWRLPFDLPEAKEELVAGYQTEYS-----------------------ILYLG 68
           F  SSLA+  RLPFDLPEA+EELVAGYQTEYS                       +LYLG
Sbjct: 218 FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLG 277

Query: 69  DWDISIPYY---------RIPSIFGMTISIFIRLTKTYLFLFISIATRWTLPRLRIDQLF 109
            WDISIPY          ++  +FGMTISIFI L KTYLFLFISIATRWTLPRLRIDQL 
Sbjct: 278 GWDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLL 337

[Close]

BLAST of CmaCh10G010870 vs. NCBI nr
Match: RZC52571.1 (hypothetical protein C5167_021002 [Papaver somniferum])

HSP 1 Score: 145.2 bits (365), Expect = 3.3e-31
Identity = 74/108 (68.52%), Postives = 84/108 (77.78%), Query Frame = 0


Query: 9   FSSSSLAKWWRLPFDLPEAKEELVAGYQTEYSILYLGDWDISIPYYRIP--------SIF 68
           F  SSLA+  RLPFDLPEA+EELVAGYQTEYS+LYLG W++S+PY  +P         +F
Sbjct: 63  FVISSLAECERLPFDLPEAEEELVAGYQTEYSVLYLGGWNLSLPYIFLPHFEISEVGGVF 122

Query: 69  GMTISIFIRLTKTYLFLFISIATRWTLPRLRIDQLFNLRWKFLLPISL 109
           GMTI IFI L K YLFLFI I TRWTLPR+R+DQL NL WKFLLPISL
Sbjct: 123 GMTIGIFITLAKAYLFLFIPITTRWTLPRMRMDQLLNLGWKFLLPISL 170

[Close]

BLAST of CmaCh10G010870 vs. NCBI nr
Match: RZC63930.1 (hypothetical protein C5167_025677 [Papaver somniferum])

HSP 1 Score: 143.3 bits (360), Expect = 1.2e-30
Identity = 73/108 (67.59%), Postives = 83/108 (76.85%), Query Frame = 0


Query: 9   FSSSSLAKWWRLPFDLPEAKEELVAGYQTEYSILYLGDWDISIPYYRIP--------SIF 68
           F  SSLA+  RLPFDLPEA+EELVAGYQTEYS+LYLG W++S+PY  +P         +F
Sbjct: 190 FVISSLAECERLPFDLPEAEEELVAGYQTEYSVLYLGGWNLSLPYIFLPHFEISEVGGVF 249

Query: 69  GMTISIFIRLTKTYLFLFISIATRWTLPRLRIDQLFNLRWKFLLPISL 109
           GMTI IFI L K YLFLFI I TRWTLPR+R+DQL NL WKFLLPI L
Sbjct: 250 GMTIGIFITLAKAYLFLFIPITTRWTLPRMRMDQLLNLGWKFLLPICL 297

[Close]

BLAST of CmaCh10G010870 vs. NCBI nr
Match: QHB76020.1 (NADH dehydrogenase subunit 1 [Cucumis melo subsp. melo])

HSP 1 Score: 142.5 bits (358), Expect = 2.1e-30
Identity = 82/132 (62.12%), Postives = 88/132 (66.67%), Query Frame = 0


Query: 9   FSSSSLAKWWRLPFDLPEAKEELVAGYQTEYS-----------------------ILYLG 68
           F  SSLA+  RLPFDLPEA+EELVAGYQTEYS                       +LYLG
Sbjct: 219 FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLG 278

Query: 69  DWDISIPYY---------RIPSIFGMTISIFIRLTKTYLFLFISIATRWTLPRLRIDQLF 109
            WDISIPY          ++  +FGMTISIFI L KTYLFLFISIATRWTLPRLRIDQL 
Sbjct: 279 GWDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLL 338

[Close]

BLAST of CmaCh10G010870 vs. NCBI nr
Match: YP_009004096.1 (NADH-plastoquinone oxidoreductase subunit 1 [Cucumis hystrix] >Q2QD36.1 RecName: Full=NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic; AltName: Full=NAD(P)H dehydrogenase subunit 1; Short=NDH subunit 1; AltName: Full=NADH-plastoquinone oxidoreductase subunit 1 [Cucumis sativus] >ALF03356.1 NADH dehydrogenase subunit 1 [Cucumis sativus var. hardwickii] >AVE15387.1 NdhA [Cucumis sativus var. sativus] >AAZ94703.1 NADH dehydrogenase subunit 1 [Cucumis sativus] >ABI97468.1 NADH-plastoquinone oxidoreductase subunit 1 [Cucumis sativus] >ABI98799.1 NADH-plastoquinone oxidoreductase subunit 1 [Cucumis sativus])

HSP 1 Score: 142.5 bits (358), Expect = 2.1e-30
Identity = 82/132 (62.12%), Postives = 88/132 (66.67%), Query Frame = 0


Query: 9   FSSSSLAKWWRLPFDLPEAKEELVAGYQTEYS-----------------------ILYLG 68
           F  SSLA+  RLPFDLPEA+EELVAGYQTEYS                       +LYLG
Sbjct: 218 FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLG 277

Query: 69  DWDISIPYY---------RIPSIFGMTISIFIRLTKTYLFLFISIATRWTLPRLRIDQLF 109
            WDISIPY          ++  +FGMTISIFI L KTYLFLFISIATRWTLPRLRIDQL 
Sbjct: 278 GWDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLL 337

[Close]

BLAST of CmaCh10G010870 vs. NCBI nr
Match: YP_247655.1 (NADH dehydrogenase subunit 1 [Cucumis sativus] >CAJ00814.1 NADH dehydrogenase subunit 1 [Cucumis sativus])

HSP 1 Score: 142.5 bits (358), Expect = 2.1e-30
Identity = 82/132 (62.12%), Postives = 88/132 (66.67%), Query Frame = 0


Query: 9   FSSSSLAKWWRLPFDLPEAKEELVAGYQTEYS-----------------------ILYLG 68
           F  SSLA+  RLPFDLPEA+EELVAGYQTEYS                       +LYLG
Sbjct: 214 FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLG 273

Query: 69  DWDISIPYY---------RIPSIFGMTISIFIRLTKTYLFLFISIATRWTLPRLRIDQLF 109
            WDISIPY          ++  +FGMTISIFI L KTYLFLFISIATRWTLPRLRIDQL 
Sbjct: 274 GWDISIPYILGYELFEINKVYEVFGMTISIFITLAKTYLFLFISIATRWTLPRLRIDQLL 333

[Close]

BLAST of CmaCh10G010870 vs. TAIR 10
Match: ATCG01100.1 (NADH dehydrogenase family protein )

HSP 1 Score: 136.3 bits (342), Expect = 1.4e-32
Identity = 78/129 (60.47%), Postives = 85/129 (65.89%), Query Frame = 0


Query: 9   FSSSSLAKWWRLPFDLPEAKEELVAGYQTEYS-----------------------ILYLG 68
           F  SSLA+  RLPFDLPEA+EEL+AGYQTEYS                       +LYLG
Sbjct: 218 FLISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLG 277

Query: 69  DWDISIPYYRI------PSIFGMTISIFIRLTKTYLFLFISIATRWTLPRLRIDQLFNLR 109
            W+ISIPY  I        IFG TI IFI L KTYLFLF+SIATRWTLPRLR+DQL NL 
Sbjct: 278 GWNISIPYISILELFQRDQIFGTTIGIFITLAKTYLFLFVSIATRWTLPRLRMDQLLNLG 337

[Close]

BLAST of CmaCh10G010870 vs. TAIR 10
Match: ATMG01120.1 (NADH dehydrogenase 1B )

HSP 1 Score: 57.4 bits (137), Expect = 8.3e-09
Identity = 46/120 (38.33%), Postives = 58/120 (48.33%), Query Frame = 0


Query: 9   FSSSSLAKWWRLPFDLPEAKEELVAGYQTEYS-----ILYLGDWDISI------------ 68
           F  S LA+  R PFDLPEA+ E VAGY  EYS     + +LG++   I            
Sbjct: 190 FLISRLAETNRAPFDLPEAEAESVAGYNVEYSSMGSALFFLGEYANMILMSGPCTLFFPG 249

Query: 69  ---PYYRIPSIFGMTISIFIRLTKTYLFLFISIATRWTLPRLRIDQLFNLRWKFLLPISL 109
              P   +P    +  SI+  + K  LFLF+ I  R   PR R DQL  L  K  LP+SL
Sbjct: 250 GWPPILDLPIFKKIPGSIWFSI-KVLLFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSL 308

[Close]

BLAST of CmaCh10G010870 vs. TAIR 10
Match: ATMG00516.1 (NADH dehydrogenase 1C )

HSP 1 Score: 57.4 bits (137), Expect = 8.3e-09
Identity = 46/120 (38.33%), Postives = 58/120 (48.33%), Query Frame = 0


Query: 9   FSSSSLAKWWRLPFDLPEAKEELVAGYQTEYS-----ILYLGDWDISI------------ 68
           F  S LA+  R PFDLPEA+ E VAGY  EYS     + +LG++   I            
Sbjct: 190 FLISRLAETNRAPFDLPEAEAESVAGYNVEYSSMGSALFFLGEYANMILMSGPCTLFFPG 249

Query: 69  ---PYYRIPSIFGMTISIFIRLTKTYLFLFISIATRWTLPRLRIDQLFNLRWKFLLPISL 109
              P   +P    +  SI+  + K  LFLF+ I  R   PR R DQL  L  K  LP+SL
Sbjct: 250 GWPPILDLPIFKKIPGSIWFSI-KVLLFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSL 308

[Close]

BLAST of CmaCh10G010870 vs. TAIR 10
Match: ATMG01275.1 (NADH dehydrogenase 1A )

HSP 1 Score: 57.4 bits (137), Expect = 8.3e-09
Identity = 46/120 (38.33%), Postives = 58/120 (48.33%), Query Frame = 0


Query: 9   FSSSSLAKWWRLPFDLPEAKEELVAGYQTEYS-----ILYLGDWDISI------------ 68
           F  S LA+  R PFDLPEA+ E VAGY  EYS     + +LG++   I            
Sbjct: 190 FLISRLAETNRAPFDLPEAEAESVAGYNVEYSSMGSALFFLGEYANMILMSGPCTLFFPG 249

Query: 69  ---PYYRIPSIFGMTISIFIRLTKTYLFLFISIATRWTLPRLRIDQLFNLRWKFLLPISL 109
              P   +P    +  SI+  + K  LFLF+ I  R   PR R DQL  L  K  LP+SL
Sbjct: 250 GWPPILDLPIFKKIPGSIWFSI-KVLLFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSL 308

The following BLAST results are available for this feature:

BLAST of CmaCh10G010870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD36	2.8e-33	62.12	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus OX=36...	[more]
A4QK75	6.8e-32	60.45	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Arabis hirsuta OX=781...	[more]
Q3V4X9	1.5e-31	60.61	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Acorus calamus OX=446...	[more]
A4QKG2	1.5e-31	61.24	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Barbarea verna OX=504...	[more]
A4QKY9	1.5e-31	61.24	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Crucihimalaya wallich...	[more]

BLAST of CmaCh10G010870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4Y7IXU2	1.6e-31	68.52	Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_021002 PE=3 SV=1	[more]
A0A4Y7JV54	6.0e-31	67.59	Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_025677 PE=3 SV=1	[more]
A0A218KGA1	1.0e-30	62.12	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus var. ...	[more]
A0A1X9Q1Y4	1.0e-30	62.12	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus OX=36...	[more]
A0A1S4EU64	1.0e-30	62.12	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis melo OX=3656 ...	[more]

BLAST of CmaCh10G010870 vs. NCBI nr


Match Name	E-value	Identity	Description
RZC52571.1	3.3e-31	68.52	hypothetical protein C5167_021002 [Papaver somniferum]	[more]
RZC63930.1	1.2e-30	67.59	hypothetical protein C5167_025677 [Papaver somniferum]	[more]
QHB76020.1	2.1e-30	62.12	NADH dehydrogenase subunit 1 [Cucumis melo subsp. melo]	[more]
YP_009004096.1	2.1e-30	62.12	NADH-plastoquinone oxidoreductase subunit 1 [Cucumis hystrix] >Q2QD36.1 RecName:...	[more]
YP_247655.1	2.1e-30	62.12	NADH dehydrogenase subunit 1 [Cucumis sativus] >CAJ00814.1 NADH dehydrogenase su...	[more]

BLAST of CmaCh10G010870 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01100.1	1.4e-32	60.47	NADH dehydrogenase family protein	[more]
ATMG01120.1	8.3e-09	38.33	NADH dehydrogenase 1B	[more]
ATMG00516.1	8.3e-09	38.33	NADH dehydrogenase 1C	[more]
ATMG01275.1	8.3e-09	38.33	NADH dehydrogenase 1A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	PFAM	PF00146	NADHdh	coord: 6..108 e-value: 7.7E-22 score: 78.0
IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	PANTHER	PTHR11432	NADH DEHYDROGENASE SUBUNIT 1	coord: 7..108
None	No IPR available	PANTHER	PTHR11432:SF3	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 1	coord: 7..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G010870.1	CmaCh10G010870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006091	generation of precursor metabolites and energy
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016020	membrane
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0005488	binding
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor