CmaCh10G009390 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh10G009390
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	cytochrome c-type biogenesis protein CcmE
Location	Cma_Chr10: 4702053 .. 4702832 (-)
RNA-Seq Expression	CmaCh10G009390
Synteny	CmaCh10G009390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAAATCTCGCTTTCCGGCTGAGATCGCACCTCCTTTTGCGGTCTTCAGTTCGTTTCTTCCCCACTTTGAATAACATTCAATCGTCCGTCATACCCAAACCTCCCCCTCTTATCTCCTCTGCACTTTCCGATCTTCGTCGACTTCCCAAAGAGACCGTCTTCAATCTGTCTGGATTTCGGTTTCTCTCAACTGCACGGCGGAATCCGACCCGTCCCAAACAGGTCGACATCGGAGCTCGGGCAAGGCAGCTTCAGACGCGCCGGCTCTGGACCTATGCTCTGACTTTCAGCTGCATCGCGGGGTTCATCGTTATCGTCCTCAATAATTTTGAAGAGCATCTGCTGTTCTACGTGACGCCGACTGATGCGCTTGAGAAATACTCTGCGAATCCCTCGAAGAATAAGTTTCGTCTCGGTGGTCTTGTTCTTGAAGGCAGTGTGATGCATCCAGCGTCGTCTTCTCAAATGGAGTTCGTGATAACGGATTTGGTCACCGATATATTGGTTCGCCATCAGGGGTCGTTGCCGGATTTGTTTAGAGAGGGGCATTCGGTCGTGGCGGAAGGTTTTATTAAGCCATTTACCGATGAGATAAGAAATGAGGTCTCTACGAAGAGTGTTTCGGGAAAAGCGAGGAGTGGGGAATATTATTTTTCGGCTACGGAGGTTTTGGCAAAGCATGATGAGAAGTATATGCCTGCGGAGGTTGCGGCTGCAATCGAGAAGAACAAGAAGAAGATCGAGGAAGGAGAATTGGGGGCGAATCACGCTTGA

mRNA sequence

ATGGCTTCAAATCTCGCTTTCCGGCTGAGATCGCACCTCCTTTTGCGGTCTTCAGTTCGTTTCTTCCCCACTTTGAATAACATTCAATCGTCCGTCATACCCAAACCTCCCCCTCTTATCTCCTCTGCACTTTCCGATCTTCGTCGACTTCCCAAAGAGACCGTCTTCAATCTGTCTGGATTTCGGTTTCTCTCAACTGCACGGCGGAATCCGACCCGTCCCAAACAGGTCGACATCGGAGCTCGGGCAAGGCAGCTTCAGACGCGCCGGCTCTGGACCTATGCTCTGACTTTCAGCTGCATCGCGGGGTTCATCGTTATCGTCCTCAATAATTTTGAAGAGCATCTGCTGTTCTACGTGACGCCGACTGATGCGCTTGAGAAATACTCTGCGAATCCCTCGAAGAATAAGTTTCGTCTCGGTGGTCTTGTTCTTGAAGGCAGTGTGATGCATCCAGCGTCGTCTTCTCAAATGGAGTTCGTGATAACGGATTTGGTCACCGATATATTGGTTCGCCATCAGGGGTCGTTGCCGGATTTGTTTAGAGAGGGGCATTCGGTCGTGGCGGAAGGTTTTATTAAGCCATTTACCGATGAGATAAGAAATGAGGTCTCTACGAAGAGTGTTTCGGGAAAAGCGAGGAGTGGGGAATATTATTTTTCGGCTACGGAGGTTTTGGCAAAGCATGATGAGAAGTATATGCCTGCGGAGGTTGCGGCTGCAATCGAGAAGAACAAGAAGAAGATCGAGGAAGGAGAATTGGGGGCGAATCACGCTTGA

Coding sequence (CDS)

ATGGCTTCAAATCTCGCTTTCCGGCTGAGATCGCACCTCCTTTTGCGGTCTTCAGTTCGTTTCTTCCCCACTTTGAATAACATTCAATCGTCCGTCATACCCAAACCTCCCCCTCTTATCTCCTCTGCACTTTCCGATCTTCGTCGACTTCCCAAAGAGACCGTCTTCAATCTGTCTGGATTTCGGTTTCTCTCAACTGCACGGCGGAATCCGACCCGTCCCAAACAGGTCGACATCGGAGCTCGGGCAAGGCAGCTTCAGACGCGCCGGCTCTGGACCTATGCTCTGACTTTCAGCTGCATCGCGGGGTTCATCGTTATCGTCCTCAATAATTTTGAAGAGCATCTGCTGTTCTACGTGACGCCGACTGATGCGCTTGAGAAATACTCTGCGAATCCCTCGAAGAATAAGTTTCGTCTCGGTGGTCTTGTTCTTGAAGGCAGTGTGATGCATCCAGCGTCGTCTTCTCAAATGGAGTTCGTGATAACGGATTTGGTCACCGATATATTGGTTCGCCATCAGGGGTCGTTGCCGGATTTGTTTAGAGAGGGGCATTCGGTCGTGGCGGAAGGTTTTATTAAGCCATTTACCGATGAGATAAGAAATGAGGTCTCTACGAAGAGTGTTTCGGGAAAAGCGAGGAGTGGGGAATATTATTTTTCGGCTACGGAGGTTTTGGCAAAGCATGATGAGAAGTATATGCCTGCGGAGGTTGCGGCTGCAATCGAGAAGAACAAGAAGAAGATCGAGGAAGGAGAATTGGGGGCGAATCACGCTTGA

Protein sequence

MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSVIPKPPPLISSALSDLRRLPKETVFNLSGFRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYVTPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDLFREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAAAIEKNKKKIEEGELGANHA

Homology

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BLAST of CmaCh10G009390 vs. ExPASy Swiss-Prot
Match: Q96326 (Cytochrome c-type biogenesis protein CcmE homolog, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CCME PE=1 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 7.0e-83
Identity = 166/250 (66.40%), Postives = 198/250 (79.20%), Query Frame = 0


Query: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSVIPKPPPLISSALSDLRRLPKETVFNLSG 60
           MA+ L FR RS  +LRS  R     N   SS    PP  I  +L+     P   + +L+ 
Sbjct: 1   MAARLLFR-RSSQILRSIQR-----NPQISSSFESPPCPIFHSLTTASPDPSR-LSSLTF 60

Query: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYV 120
            R LS ARR PTRPK++DIGA+ARQ+Q RRLWTYALTFSCIAGF+VIVLN F++ L+FY+
Sbjct: 61  LRSLSIARRGPTRPKKIDIGAKARQMQNRRLWTYALTFSCIAGFVVIVLNQFQDQLVFYL 120

Query: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180
           TP+DA+EK++ NP+KNKFRLGGLVLEGSV  PA+S +MEFVITDL+TDILVR++GSLPDL
Sbjct: 121 TPSDAMEKFAENPTKNKFRLGGLVLEGSVAQPAASQEMEFVITDLITDILVRYKGSLPDL 180

Query: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVV EGFIKP+TDE+R EVSTK +S KAR+ + +FSATEVLAKHDEKYMP EVAA
Sbjct: 181 FREGHSVVVEGFIKPYTDEVRKEVSTKPISKKARNLDCFFSATEVLAKHDEKYMPQEVAA 240

Query: 241 AIEKNKKKIE 251
           AIEKNKK IE
Sbjct: 241 AIEKNKKIIE 243

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BLAST of CmaCh10G009390 vs. ExPASy Swiss-Prot
Match: B3R8Z5 (Cytochrome c-type biogenesis protein CcmE OS=Cupriavidus taiwanensis (strain DSM 17343 / BCRC 17206 / CCUG 44338 / CIP 107171 / LMG 19424 / R1) OX=977880 GN=ccmE PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-19
Identity = 58/156 (37.18%), Postives = 80/156 (51.28%), Query Frame = 0


Query: 89  RRLWTYALTFSCIAGFIVIVLNNFEEHLLFYVTPTDALEKYSANPSKNKFRLGGLVLEGS 148
           RRL   A   +C      +VLN F  +L+F+ +P+    + +  P    FRLGGLV  GS
Sbjct: 6   RRLGLLAAALACCGVAAALVLNAFRANLVFFFSPSQVAAQEA--PVARSFRLGGLVASGS 65

Query: 149 VMHPASSSQMEFVITDLVTDILVRHQGSLPDLFREGHSVVAEGFIKPFTDEIRNEVSTKS 208
           +        + FV+TD    + V+++G LPDLFREG  VVA G ++              
Sbjct: 66  IRREGDGMTVRFVVTDTARQVPVQYRGLLPDLFREGKGVVARGQLR-------------- 125

Query: 209 VSGKARSGEYYFSATEVLAKHDEKYMPAEVAAAIEK 245
                   +  F ATEVLAKHDE YMP E AAA+++
Sbjct: 126 -------ADGTFVATEVLAKHDENYMPPEAAAALKQ 138

[Close]

BLAST of CmaCh10G009390 vs. ExPASy Swiss-Prot
Match: Q5P3K6 (Cytochrome c-type biogenesis protein CcmE OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=ccmE PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.5e-19
Identity = 57/161 (35.40%), Postives = 85/161 (52.80%), Query Frame = 0


Query: 87  QTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYVTPTDALEKYSANPSKNKFRLGGLVLE 146
           +++RL   A   + + G + +VLN F+++L+F+ TPT+  E     P    FR+GG+V  
Sbjct: 4   RSKRLLLVAGAVALLVGAVALVLNAFQQNLVFFHTPTEVAE--GKAPVGRAFRIGGMVET 63

Query: 147 GSVMHPASSSQMEFVITDLVTDILVRHQGSLPDLFREGHSVVAEGFIKPFTDEIRNEVST 206
           GS+   A    ++F ITD    I V ++GSLPDLF EG   V +G + P           
Sbjct: 64  GSIRRAADGVTVQFAITDTAKVIPVSYKGSLPDLFSEGKGAVVQGTLGP----------- 123

Query: 207 KSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAAAIEKNKK 248
                     +  F A+EVLAKHDE YMP E   A+++ +K
Sbjct: 124 ----------DGQFQASEVLAKHDENYMPPEAQHAVDQAQK 141

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BLAST of CmaCh10G009390 vs. ExPASy Swiss-Prot
Match: Q2RYF4 (Cytochrome c-type biogenesis protein CcmE OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=ccmE PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.5e-19
Identity = 61/159 (38.36%), Postives = 84/159 (52.83%), Query Frame = 0


Query: 89  RRLWTYALTFSCIAGFIVIVLNNFEEHLLFYVTPTDALEKYSANPSKNKFRLGGLVLEGS 148
           RRL+   L    +     + L  F+++L+F+ +PTD  EK        +FR+GGLV EGS
Sbjct: 6   RRLYFVVLGMLALFAAAGLTLTAFQDNLVFFYSPTDLQEK--GVDQGRRFRVGGLVEEGS 65

Query: 149 VMHPASSSQMEFVITDLVTDILVRHQGSLPDLFREGHSVVAEGFIKPFTDEIRNEVSTKS 208
           V+    +  + F++TDL+  + VR+ G LPDLFREG  VVAEG                 
Sbjct: 66  VVRDGET--VRFIVTDLMNTVTVRYTGMLPDLFREGQGVVAEG----------------- 125

Query: 209 VSGKARSGEYYFSATEVLAKHDEKYMPAEVAAAIEKNKK 248
               A  G   F A  VLAKHDE YMP EVA +++ + K
Sbjct: 126 ----AMDGAGTFVAASVLAKHDENYMPPEVAESLKASGK 139

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BLAST of CmaCh10G009390 vs. ExPASy Swiss-Prot
Match: Q82WC5 (Cytochrome c-type biogenesis protein CcmE OS=Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298) OX=228410 GN=ccmE PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.5e-19
Identity = 60/159 (37.74%), Postives = 86/159 (54.09%), Query Frame = 0


Query: 89  RRLWTYALTFSCIAGFIVIVLNNFEEHLLFYVTPTDALEKYSANPSKNKFRLGGLVLEGS 148
           +++   AL+ S +   +V+VLN F+ +L+F+ +P+    K +  P    FR+GGLV EGS
Sbjct: 6   KKMAVIALSVSALTVAVVLVLNAFQSNLVFFFSPSQVAAKEA--PIGKSFRIGGLVEEGS 65

Query: 149 VMHPASSSQMEFVITDLVTDILVRHQGSLPDLFREGHSVVAEGFIKPFTDEIRNEVSTKS 208
           +      + + F ITD    I V + G LPDLF+EG  VVA+G +               
Sbjct: 66  LKREGDGTTLNFAITDTAEVIRVVYTGILPDLFKEGKGVVAQGKM--------------- 125

Query: 209 VSGKARSGEYYFSATEVLAKHDEKYMPAEVAAAIEKNKK 248
               A  G +Y  A EVLAKHDE YMP E A+A+E+  K
Sbjct: 126 ----ADDGIFY--ADEVLAKHDENYMPPEAASALEQAAK 141

[Close]

BLAST of CmaCh10G009390 vs. ExPASy TrEMBL
Match: A0A6J1JKW0 (uncharacterized protein LOC111485504 OS=Cucurbita maxima OX=3661 GN=LOC111485504 PE=3 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 2.5e-139
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSVIPKPPPLISSALSDLRRLPKETVFNLSG 60
           MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSVIPKPPPLISSALSDLRRLPKETVFNLSG
Sbjct: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSVIPKPPPLISSALSDLRRLPKETVFNLSG 60

Query: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYV 120
           FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYV
Sbjct: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYV 120

Query: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180
           TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL
Sbjct: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180

Query: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGANHA 260
           AIEKNKKKIEEGELGANHA
Sbjct: 241 AIEKNKKKIEEGELGANHA 259

[Close]

BLAST of CmaCh10G009390 vs. ExPASy TrEMBL
Match: A0A6J1H9Y7 (uncharacterized protein LOC111461474 OS=Cucurbita moschata OX=3662 GN=LOC111461474 PE=3 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 5.1e-137
Identity = 254/259 (98.07%), Postives = 256/259 (98.84%), Query Frame = 0


Query: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSVIPKPPPLISSALSDLRRLPKETVFNLSG 60
           MASNLAFRLRSHLLLRSSVRFFPTLNNIQSS IPK PPLISSALSDLRRLPKETVFNLSG
Sbjct: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSAIPKSPPLISSALSDLRRLPKETVFNLSG 60

Query: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYV 120
           FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVI+LNNFEEHLLFYV
Sbjct: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIILNNFEEHLLFYV 120

Query: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180
           TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL
Sbjct: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180

Query: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVVAEGFIKPFTD+IRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVAEGFIKPFTDDIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGANHA 260
           AIEKNKKKIEEGELG NHA
Sbjct: 241 AIEKNKKKIEEGELGVNHA 259

[Close]

BLAST of CmaCh10G009390 vs. ExPASy TrEMBL
Match: A0A0A0M028 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613490 PE=3 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 2.0e-117
Identity = 219/259 (84.56%), Postives = 236/259 (91.12%), Query Frame = 0


Query: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSVIPKPPPLISSALSDLRRLPKETVFNLSG 60
           MA+NLA RLRS LLL+SS RF  T +  QS  IPK  PLI+SALSDLRR+P   +FNLSG
Sbjct: 1   MATNLALRLRSRLLLQSSSRFRTTFHQFQSPHIPKSSPLITSALSDLRRIPNNPIFNLSG 60

Query: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYV 120
           FRF STARRN TRPK VDIGARARQLQTRRLWTYALTFSCIAGF+VIVL+NF+EHL+FYV
Sbjct: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120

Query: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180
           TPTDALEK+SANPSKNKFRLGGLVLEGSV HPASSSQMEFVITDL+TD+LVRHQGSLPDL
Sbjct: 121 TPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180

Query: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVV EGF+KPFTDEIRNE+STKSVSGKARS +YYFSA EVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGANHA 260
           AIEKN+KKIEEGELG NHA
Sbjct: 241 AIEKNRKKIEEGELGVNHA 259

[Close]

BLAST of CmaCh10G009390 vs. ExPASy TrEMBL
Match: A0A5A7V022 (Cytochrome c-type biogenesis protein CcmE OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold601G00020 PE=3 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 4.5e-117
Identity = 219/259 (84.56%), Postives = 236/259 (91.12%), Query Frame = 0


Query: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSVIPKPPPLISSALSDLRRLPKETVFNLSG 60
           MA+NLAFRLRS LLL+SS RF  T + IQS  IPK  PLISSALSDLRR+P   +FNLSG
Sbjct: 1   MATNLAFRLRSRLLLQSSSRFRTTFHQIQSPHIPKSSPLISSALSDLRRIPDNPIFNLSG 60

Query: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYV 120
           FRF STARRN TRPK VDIGARARQLQTRRLWTYALTFSCIAGF+VIVL+NF+EHL+FYV
Sbjct: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120

Query: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180
           TPTDALEK+SANP+KNKFRLGGLVLEGSV HPASSSQMEFVITDL+TD+LVRHQGSLPDL
Sbjct: 121 TPTDALEKFSANPAKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180

Query: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVV EGF+KPFTDEIRNE+STKSVS KARS +YYFSA EVLAKHDEKYMPAEV A
Sbjct: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSEKARSEKYYFSAIEVLAKHDEKYMPAEVGA 240

Query: 241 AIEKNKKKIEEGELGANHA 260
           AIEKN+KKIEEGELG NHA
Sbjct: 241 AIEKNRKKIEEGELGVNHA 259

[Close]

BLAST of CmaCh10G009390 vs. ExPASy TrEMBL
Match: A0A1S3BP93 (cytochrome c-type biogenesis protein CcmE OS=Cucumis melo OX=3656 GN=LOC103492039 PE=3 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 4.5e-117
Identity = 219/259 (84.56%), Postives = 236/259 (91.12%), Query Frame = 0


Query: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSVIPKPPPLISSALSDLRRLPKETVFNLSG 60
           MA+NLAFRLRS LLL+SS RF  T + IQS  IPK  PLISSALSDLRR+P   +FNLSG
Sbjct: 1   MATNLAFRLRSRLLLQSSSRFRTTFHQIQSPHIPKSSPLISSALSDLRRIPDNPIFNLSG 60

Query: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYV 120
           FRF STARRN TRPK VDIGARARQLQTRRLWTYALTFSCIAGF+VIVL+NF+EHL+FYV
Sbjct: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120

Query: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180
           TPTDALEK+SANP+KNKFRLGGLVLEGSV HPASSSQMEFVITDL+TD+LVRHQGSLPDL
Sbjct: 121 TPTDALEKFSANPAKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180

Query: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVV EGF+KPFTDEIRNE+STKSVS KARS +YYFSA EVLAKHDEKYMPAEV A
Sbjct: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSEKARSEKYYFSAIEVLAKHDEKYMPAEVGA 240

Query: 241 AIEKNKKKIEEGELGANHA 260
           AIEKN+KKIEEGELG NHA
Sbjct: 241 AIEKNRKKIEEGELGVNHA 259

[Close]

BLAST of CmaCh10G009390 vs. NCBI nr
Match: XP_022988189.1 (uncharacterized protein LOC111485504 [Cucurbita maxima])

HSP 1 Score: 504.6 bits (1298), Expect = 5.1e-139
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSVIPKPPPLISSALSDLRRLPKETVFNLSG 60
           MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSVIPKPPPLISSALSDLRRLPKETVFNLSG
Sbjct: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSVIPKPPPLISSALSDLRRLPKETVFNLSG 60

Query: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYV 120
           FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYV
Sbjct: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYV 120

Query: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180
           TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL
Sbjct: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180

Query: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGANHA 260
           AIEKNKKKIEEGELGANHA
Sbjct: 241 AIEKNKKKIEEGELGANHA 259

[Close]

BLAST of CmaCh10G009390 vs. NCBI nr
Match: XP_023515457.1 (uncharacterized protein LOC111779609 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 498.4 bits (1282), Expect = 3.6e-137
Identity = 255/259 (98.46%), Postives = 257/259 (99.23%), Query Frame = 0


Query: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSVIPKPPPLISSALSDLRRLPKETVFNLSG 60
           MASNLAFRLRSHLLLRSSVRFFPTLNNIQSS IPK PPLI+SALSDLRRLPKETVFNLSG
Sbjct: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSAIPKSPPLIASALSDLRRLPKETVFNLSG 60

Query: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYV 120
           FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVI+LNNFEEHLLFYV
Sbjct: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIILNNFEEHLLFYV 120

Query: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180
           TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL
Sbjct: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180

Query: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGANHA 260
           AIEKNKKKIEEGELGANHA
Sbjct: 241 AIEKNKKKIEEGELGANHA 259

[Close]

BLAST of CmaCh10G009390 vs. NCBI nr
Match: XP_022960773.1 (uncharacterized protein LOC111461474 [Cucurbita moschata] >KAG6590209.1 Cytochrome c-type biogenesis protein CcmE-like, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 496.9 bits (1278), Expect = 1.1e-136
Identity = 254/259 (98.07%), Postives = 256/259 (98.84%), Query Frame = 0


Query: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSVIPKPPPLISSALSDLRRLPKETVFNLSG 60
           MASNLAFRLRSHLLLRSSVRFFPTLNNIQSS IPK PPLISSALSDLRRLPKETVFNLSG
Sbjct: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSAIPKSPPLISSALSDLRRLPKETVFNLSG 60

Query: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYV 120
           FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVI+LNNFEEHLLFYV
Sbjct: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIILNNFEEHLLFYV 120

Query: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180
           TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL
Sbjct: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180

Query: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVVAEGFIKPFTD+IRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVAEGFIKPFTDDIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGANHA 260
           AIEKNKKKIEEGELG NHA
Sbjct: 241 AIEKNKKKIEEGELGVNHA 259

[Close]

BLAST of CmaCh10G009390 vs. NCBI nr
Match: XP_038880283.1 (cytochrome c-type biogenesis protein CcmE homolog, mitochondrial [Benincasa hispida] >XP_038880284.1 cytochrome c-type biogenesis protein CcmE homolog, mitochondrial [Benincasa hispida] >XP_038880285.1 cytochrome c-type biogenesis protein CcmE homolog, mitochondrial [Benincasa hispida] >XP_038880286.1 cytochrome c-type biogenesis protein CcmE homolog, mitochondrial [Benincasa hispida])

HSP 1 Score: 444.5 bits (1142), Expect = 6.2e-121
Identity = 227/259 (87.64%), Postives = 239/259 (92.28%), Query Frame = 0


Query: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSVIPKPPPLISSALSDLRRLPKETVFNLSG 60
           MA+NLA RLRS LLL+SS RF    ++IQ   +PK  PLISSALSDLRR P + +FNLSG
Sbjct: 1   MATNLALRLRSRLLLQSSARFRSNFHHIQPPHLPKSSPLISSALSDLRRFPNDPIFNLSG 60

Query: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYV 120
           FRF STARRN TRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVL+NF+EHL+FYV
Sbjct: 61  FRFFSTARRNLTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLSNFQEHLMFYV 120

Query: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180
           TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDL+TDILVRHQGSLPDL
Sbjct: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLITDILVRHQGSLPDL 180

Query: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVV EGF+KPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVVEGFVKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGANHA 260
           AIEKNKKKI EGELG NHA
Sbjct: 241 AIEKNKKKIAEGELGLNHA 259

[Close]

BLAST of CmaCh10G009390 vs. NCBI nr
Match: XP_004139025.1 (cytochrome c-type biogenesis protein CcmE homolog, mitochondrial [Cucumis sativus] >KGN66477.1 hypothetical protein Csa_007598 [Cucumis sativus])

HSP 1 Score: 431.8 bits (1109), Expect = 4.2e-117
Identity = 219/259 (84.56%), Postives = 236/259 (91.12%), Query Frame = 0


Query: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSVIPKPPPLISSALSDLRRLPKETVFNLSG 60
           MA+NLA RLRS LLL+SS RF  T +  QS  IPK  PLI+SALSDLRR+P   +FNLSG
Sbjct: 1   MATNLALRLRSRLLLQSSSRFRTTFHQFQSPHIPKSSPLITSALSDLRRIPNNPIFNLSG 60

Query: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYV 120
           FRF STARRN TRPK VDIGARARQLQTRRLWTYALTFSCIAGF+VIVL+NF+EHL+FYV
Sbjct: 61  FRFFSTARRNLTRPKHVDIGARARQLQTRRLWTYALTFSCIAGFVVIVLSNFQEHLMFYV 120

Query: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180
           TPTDALEK+SANPSKNKFRLGGLVLEGSV HPASSSQMEFVITDL+TD+LVRHQGSLPDL
Sbjct: 121 TPTDALEKFSANPSKNKFRLGGLVLEGSVTHPASSSQMEFVITDLITDMLVRHQGSLPDL 180

Query: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVV EGF+KPFTDEIRNE+STKSVSGKARS +YYFSA EVLAKHDEKYMPAEVAA
Sbjct: 181 FREGHSVVVEGFLKPFTDEIRNEISTKSVSGKARSEKYYFSAIEVLAKHDEKYMPAEVAA 240

Query: 241 AIEKNKKKIEEGELGANHA 260
           AIEKN+KKIEEGELG NHA
Sbjct: 241 AIEKNRKKIEEGELGVNHA 259

[Close]

BLAST of CmaCh10G009390 vs. TAIR 10
Match: AT3G51790.1 (transmembrane protein G1P-related 1 )

HSP 1 Score: 308.5 bits (789), Expect = 5.0e-84
Identity = 166/250 (66.40%), Postives = 198/250 (79.20%), Query Frame = 0


Query: 1   MASNLAFRLRSHLLLRSSVRFFPTLNNIQSSVIPKPPPLISSALSDLRRLPKETVFNLSG 60
           MA+ L FR RS  +LRS  R     N   SS    PP  I  +L+     P   + +L+ 
Sbjct: 1   MAARLLFR-RSSQILRSIQR-----NPQISSSFESPPCPIFHSLTTASPDPSR-LSSLTF 60

Query: 61  FRFLSTARRNPTRPKQVDIGARARQLQTRRLWTYALTFSCIAGFIVIVLNNFEEHLLFYV 120
            R LS ARR PTRPK++DIGA+ARQ+Q RRLWTYALTFSCIAGF+VIVLN F++ L+FY+
Sbjct: 61  LRSLSIARRGPTRPKKIDIGAKARQMQNRRLWTYALTFSCIAGFVVIVLNQFQDQLVFYL 120

Query: 121 TPTDALEKYSANPSKNKFRLGGLVLEGSVMHPASSSQMEFVITDLVTDILVRHQGSLPDL 180
           TP+DA+EK++ NP+KNKFRLGGLVLEGSV  PA+S +MEFVITDL+TDILVR++GSLPDL
Sbjct: 121 TPSDAMEKFAENPTKNKFRLGGLVLEGSVAQPAASQEMEFVITDLITDILVRYKGSLPDL 180

Query: 181 FREGHSVVAEGFIKPFTDEIRNEVSTKSVSGKARSGEYYFSATEVLAKHDEKYMPAEVAA 240
           FREGHSVV EGFIKP+TDE+R EVSTK +S KAR+ + +FSATEVLAKHDEKYMP EVAA
Sbjct: 181 FREGHSVVVEGFIKPYTDEVRKEVSTKPISKKARNLDCFFSATEVLAKHDEKYMPQEVAA 240

Query: 241 AIEKNKKKIE 251
           AIEKNKK IE
Sbjct: 241 AIEKNKKIIE 243

The following BLAST results are available for this feature:

BLAST of CmaCh10G009390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96326	7.0e-83	66.40	Cytochrome c-type biogenesis protein CcmE homolog, mitochondrial OS=Arabidopsis ...	[more]
B3R8Z5	1.1e-19	37.18	Cytochrome c-type biogenesis protein CcmE OS=Cupriavidus taiwanensis (strain DSM...	[more]
Q5P3K6	2.5e-19	35.40	Cytochrome c-type biogenesis protein CcmE OS=Aromatoleum aromaticum (strain EbN1...	[more]
Q2RYF4	2.5e-19	38.36	Cytochrome c-type biogenesis protein CcmE OS=Rhodospirillum rubrum (strain ATCC ...	[more]
Q82WC5	5.5e-19	37.74	Cytochrome c-type biogenesis protein CcmE OS=Nitrosomonas europaea (strain ATCC ...	[more]

BLAST of CmaCh10G009390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JKW0	2.5e-139	100.00	uncharacterized protein LOC111485504 OS=Cucurbita maxima OX=3661 GN=LOC111485504...	[more]
A0A6J1H9Y7	5.1e-137	98.07	uncharacterized protein LOC111461474 OS=Cucurbita moschata OX=3662 GN=LOC1114614...	[more]
A0A0A0M028	2.0e-117	84.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613490 PE=3 SV=1	[more]
A0A5A7V022	4.5e-117	84.56	Cytochrome c-type biogenesis protein CcmE OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3BP93	4.5e-117	84.56	cytochrome c-type biogenesis protein CcmE OS=Cucumis melo OX=3656 GN=LOC10349203...	[more]

BLAST of CmaCh10G009390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022988189.1	5.1e-139	100.00	uncharacterized protein LOC111485504 [Cucurbita maxima]	[more]
XP_023515457.1	3.6e-137	98.46	uncharacterized protein LOC111779609 [Cucurbita pepo subsp. pepo]	[more]
XP_022960773.1	1.1e-136	98.07	uncharacterized protein LOC111461474 [Cucurbita moschata] >KAG6590209.1 Cytochro...	[more]
XP_038880283.1	6.2e-121	87.64	cytochrome c-type biogenesis protein CcmE homolog, mitochondrial [Benincasa hisp...	[more]
XP_004139025.1	4.2e-117	84.56	cytochrome c-type biogenesis protein CcmE homolog, mitochondrial [Cucumis sativu...	[more]

BLAST of CmaCh10G009390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51790.1	5.0e-84	66.40	transmembrane protein G1P-related 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.140		coord: 112..242 e-value: 6.7E-29 score: 102.2
IPR004329	CcmE/CycJ protein	PFAM	PF03100	CcmE	coord: 87..235 e-value: 3.4E-42 score: 143.4
IPR004329	CcmE/CycJ protein	PANTHER	PTHR34128	CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCME HOMOLOG, MITOCHONDRIAL	coord: 1..255
IPR004329	CcmE/CycJ protein	HAMAP	MF_01959	CcmE	coord: 84..246 score: 24.889036
IPR036127	CcmE-like superfamily	SUPERFAMILY	82093	Heme chaperone CcmE	coord: 112..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G009390.1	CmaCh10G009390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017004	cytochrome complex assembly
biological_process	GO:0016310	phosphorylation
biological_process	GO:0017003	protein-heme linkage
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0020037	heme binding
molecular_function	GO:0016301	kinase activity