CmaCh10G007720 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh10G007720
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr10: 3540381 .. 3541310 (-)
RNA-Seq ExpressionCmaCh10G007720
SyntenyCmaCh10G007720
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTACCTGGTCGGATACGCCGCTGCCCCACTTCCTTTTTGTCTTGATCATTTGTTTCTATTCCATTCGTCGCTCCAAATGTAAGAGCAGACCAGACCCCCTCCGTCACCGTCGTTTCCAAATTCTCAGAGCCCCGTAATCGTTCTGTTCATGTGATTTTCCATGCCCTGATAATGGGCCAGACATTGGGTGCTTTTCATCGCAATTTGATTTGATATCAGGCCCGGGAATGCTCTTAAGCCCGTCGCCGCGCTCACACGCACACCAACTGTTTGTAGAAATGTCAGGTATATTTCTTTTCCCCGTTTGTTCAGGTAGCTTGGAGCTTTTTGGTTTTCGATGTGTATTATTCAGTGTTTGCATTACATTAATCTGTAGTTTCCTCTTTGTCTAGCTCGAGATGCTGATTCGCATCCGAAGCAACAGCCTTCTCCCATTTGTAAGCATTTCTCCTCCACGTGCGTTCTGAGCTACCTACTTTCCATTTTGCTTCTTTGCTAGAAACCATCTTTCAACGCCCAAAACAGCTAAAGAAACCAAGGCATAGCAACTTAGTTAGTTGGGGTCATTTCTTTTTACTCCATTACTGCTAAAGAATGAGCAAACTCCAAAATCTCACTTACCCAGATGCCTACACTCAGCAAACTAGTCTTATACCGGCTTAGGCACGCCAGGCACAGGCTTTTCTCATAGCCATCGTTACATTCTTAATGGAAAACCGAGTTTTTTTCAAGAATATTTTAACCTCTTTTCTCAATTTCTCTCATGAAAGAATGCTACTGCCTCGAGTCGTGAAAAGGCTCGTATTATCACTTAAGTCTGTGACAATAATGACTCTCTTTCTGTCCTTATTATCACTTGCATCGTTAAGAACCCTGCAGCCCGGAACTTGGTACATACATTTATGTGCTGTGTTTTACTTGCAGAG

mRNA sequence

ATGGTTACCTGGTCGGATACGCCGCTGCCCCACTTCCTTTTTGTCTTGATCATTTGTTTCTATTCCATTCGTCGCTCCAAATGCCCGGGAATGCTCTTAAGCCCGTCGCCGCGCTCACACGCACACCAACTGTTTGTAGAAATGTCAGCTCGAGATGCTGATTCGCATCCGAAGCAACAGCCTTCTCCCATTTAG

Coding sequence (CDS)

ATGGTTACCTGGTCGGATACGCCGCTGCCCCACTTCCTTTTTGTCTTGATCATTTGTTTCTATTCCATTCGTCGCTCCAAATGCCCGGGAATGCTCTTAAGCCCGTCGCCGCGCTCACACGCACACCAACTGTTTGTAGAAATGTCAGCTCGAGATGCTGATTCGCATCCGAAGCAACAGCCTTCTCCCATTTAG

Protein sequence

MVTWSDTPLPHFLFVLIICFYSIRRSKCPGMLLSPSPRSHAHQLFVEMSARDADSHPKQQPSPI
Homology
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BLAST of CmaCh10G007720 vs. NCBI nr
Match: KAG6590041.1 (Guanine nucleotide-binding protein subunit gamma 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 89.0 bits (219), Expect = 1.6e-14
Identity = 48/72 (66.67%), Postives = 51/72 (70.83%), Query Frame = 0 

Query: 1  MVTWSDTPLPHFLFVLI--------ICFYSIRRSKCPGMLLSPSPRSHAHQLFVEMSARD 60
          MVT S+TPLPHFLFVLI        +          PG LLSPSPRSHAHQLFVEMSARD
Sbjct: 1  MVTQSETPLPHFLFVLIFRQTPSVTVSSKFSEPHNRPGTLLSPSPRSHAHQLFVEMSARD 60

Query: 61 ADSHPKQQPSPI 65
          A SHPKQQPSP+
Sbjct: 61 AGSHPKQQPSPL 72

The following BLAST results are available for this feature:
BLAST of CmaCh10G007720 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh10G007720 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh10G007720 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6590041.11.6e-1466.67Guanine nucleotide-binding protein subunit gamma 3, partial [Cucurbita argyrospe... [more]
BLAST of CmaCh10G007720 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh10G007720.1CmaCh10G007720.1mRNA