CmaCh10G007680 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh10G007680
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr10: 3533345 .. 3536187 (-)
RNA-Seq ExpressionCmaCh10G007680
SyntenyCmaCh10G007680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGGCGGAGGTGTAGGTGTAGAGAAGGGAATCGGAGGTAGCAGAGGAGGACAGAGATTGGAGATGGGCAGAGTACCAGTCATGGTGGGTGAGATAATCAGATGGCAGAGCATGATGTTTCATGCGAACAATGTAGGTTCGTTTGGCATTGACAAAGACACAAGGAAGAAGAAGAAGAAGAAGAAGAAAGGAAGCAACGAGTAATCTAGCCATGGACCCCATGGGAAGGAAGTAAGGAAGAGTGAAGAAATCTCACTTAAAGCTAAGCATATAAGCAAGCAGAGAGAGCTGAGAAGGAGAGGAATGGCCAAACACAGCTCCCAAAACAAAGCTGACTGTCAAACCAAGAAGGGGTAGAGAAGGACAGTGCAAGGACCAGTGTCTGGTTTATATAGCAAGGTAAAGTTCCAAACAAGGCTGCCATTTCCCTTTTATTACATAAACACCACCCATGATTTCTTCCTCCAAAATGGCCCTACTTTTTAGGCTTTCGGTTCCCATGCTTAGGAGGGAAGGAAATTTGAAGCTTTTCCTCAGTAGATTTATTTTAAAAATGTTGAGTGTAGGTTTGTAAAGAAAAATTCAAAAAAGACAATATCTACTCTTAAAAATGTGGATTATCTCCGTAAGAATATGGAAACTTCTAGCTAAACGTGTTGTGAGATGATGTTAAAAAAAAAAAAAAAAAAACTTTTTTTTTTTTGGAAGAGGACAGCCAACTCCCCGAGGAAAAAAAACCCACAAAATGTGCTCTTCCTCACGGGTTTAGCTTGTTTTGAAGTAACCCGTGAATGAGAATTTTGTATTGTACCTCAGATGACAGATTTTGACAGATTTTGGAAACACTGAGACTGTGAGGTTTATATGTGCAATTTTGTCTTTCCCTTCATATGAATGAATGGCTACTAAAATCACATCTCTAAATCATTTATTTACCAACACGAAAATAATACTTCAAAGGTAAGATTTGAGATTTGAGTAAGCATTTGAGCAAGCATTAAATCTCCTCCTCCTCCTCCTCCTCCTCCTCCTATTCCGTTTCTTCTCTCTGTTCTTATTTCCCACACCATGACAAACCCACCTCCCCAGCTGTAAAACGCGTTAAGTTTTGTCATTGCTCTTTTTTTTTTTTTTCTTTCAGGTTATGCAGTGAAAATGCTTTGAAGGGTTGTGTTCACATGAAAGCGGGAGTGGCTGAAATTGGTAACTATGAAAATTGCACACAAAGTGTTCGACAAAATGCCAATGAGACCGAGATGAGGACAATTTGGTGGCATTTTGGGGGAAGTGACGAGAGGAGGGAGGGAGGGAGGGGCTGTTTGGGGAAAGTAAAAAAGGGGTGGACACGGCAGTCAATAAGGAAAAGGGCAGATACCAAGATTGATAAATGCATGGGAGAAAGAGCCAAAATGGGTCTCTTTTTTAAAACAAAATTGAGATAAGAGGGCAGCACAACACACACACCATTTGCGTAAGGTAACGGCTACATATCGTGCCTTTTTGACTGAAACCATGCGCTGGTGGCCGTTGTGGGAATGCGATGGGACTTGCGTAGTATTCAACATAGCCAGCTCAACTAAACTAAAGGTAAAGGAACTAGTGTTTATGTTATATCTTAGTATATGAAATTTGAGCATTTGAATCAGCCAAATTGAATGAAAGGAGTATATGTTGCTTATAGTACTAAAAATTTGAGCAGGTCGAACTAAATGGAAGAAGTATATCTTGTTTCTAGTACTAGAAATTTGAATTGGTCAGATTGAATGGAAGGAGCCCTATGCTACTTGTAGTACTAGAAATTTGAATGGGTAGGCCTAAATGGAAGGAATATATACAACTTGTAGTACTAGAATTTGCATTGATCGAACTGAATGGAAGGAGCATATGCTACTTGTAGTACTAGAAATTTGAACGGGTAGGACAAAATAGAAGGAGTATACACGACTTGTAGTACTAGAAATTTGAATAGGTCAAACTGAATGGAAGAAGTATGTACTACCATAGTTTTGTAACAGCTAAAACTCACCACTACCAGATATTGTTCTCTTTGGACCTTCTTTTTTAGGTTTTCCCTCAAAGTTGTAAAACACGTCTACTAAGAAAAGGATCATGCACCTTCATAAGAAATATTTCGTTTCTCAGGACTTTCCCTTTTAGGTTTTCTACTAGGAAGAGATATTCACACCTTCATAAGAAATATTTCGTTCCTTTCTCGAACCGATGTAAGACCTCACAAAGTTCTACAAATTCTGCTCGATTTAGATGGGCACTCCTTTCAAAAACCCATGCTTCTAATCTTGTAGTTACCCAACTCTTAATGATTCACCTAAAAACATAATTAAGTTTGAACAACTTCCCTTGTTCGTGATAGTAGAATTGAATTGGGTGGGCATGATGGGCGTGGAGAGTGGGGTGGCTCCACCACTCAATCCCACCGTAGATGGTGGCACGGATTAAGGTGTGGAAAAAGTCCAGGAAAAAGCGCACGCTTAGGGAATGGAATCATGGGGTGGTGGCTCTCTTAAAAGAGGATATGGACACACAGGTAAAACAGTGCCTGTATTTTATTTCAAAGCCCACGCCTTCCCCTCCCTCTTCTCATTCTTTGTTTATTGTTTGTTTTGTCACCGACTCCAAATTGGGATCTGTGGGAAACAACCTTTCTTAATTGTTTCTATAGATCTCAATTCCCAATGCATATATTATTAAAATTCCTTCTCTTCTCCTTCAATCTTCTTCATCACTTGTATTTTAATGTAAATTTGGTCTCTTTTTTCTATTATTTCGTTACAAATTTGCAGTTGATGATGGGAAAAGTTTTAAGGAAAGTCCTCGTGTAA

mRNA sequence

ATGGTAGGCGGAGGTGTAGGTGTAGAGAAGGGAATCGGAGGTAGCAGAGGAGGACAGAGATTGGAGATGGGCAGAGTACCAGTCATGGTGGGTGAGATAATCAGATGGCAGAGCATGATGTTTCATGCGAACAATGTAGGTTCGTTTGGCATTGACAAAGACACAAGGAAGAAGAAGAAGAAGAAGAAGAAAGGAAGCAACGAGTTATGCAGTGAAAATGCTTTGAAGGGTTGTGTTCACATGAAAGCGGGAGTGGCTGAAATTGGTAACTATGAAAATTGCACACAAAGTGTTCGACAAAATGCCAATGAGACCGAGATGAGGACAATTTGGTGGCATTTTGGGGGAAGTGACGAGAGGAGGGAGGGAGGGAGGGGCTGTTTGGGGAAATTGATGATGGGAAAAGTTTTAAGGAAAGTCCTCGTGTAA

Coding sequence (CDS)

ATGGTAGGCGGAGGTGTAGGTGTAGAGAAGGGAATCGGAGGTAGCAGAGGAGGACAGAGATTGGAGATGGGCAGAGTACCAGTCATGGTGGGTGAGATAATCAGATGGCAGAGCATGATGTTTCATGCGAACAATGTAGGTTCGTTTGGCATTGACAAAGACACAAGGAAGAAGAAGAAGAAGAAGAAGAAAGGAAGCAACGAGTTATGCAGTGAAAATGCTTTGAAGGGTTGTGTTCACATGAAAGCGGGAGTGGCTGAAATTGGTAACTATGAAAATTGCACACAAAGTGTTCGACAAAATGCCAATGAGACCGAGATGAGGACAATTTGGTGGCATTTTGGGGGAAGTGACGAGAGGAGGGAGGGAGGGAGGGGCTGTTTGGGGAAATTGATGATGGGAAAAGTTTTAAGGAAAGTCCTCGTGTAA

Protein sequence

MVGGGVGVEKGIGGSRGGQRLEMGRVPVMVGEIIRWQSMMFHANNVGSFGIDKDTRKKKKKKKKGSNELCSENALKGCVHMKAGVAEIGNYENCTQSVRQNANETEMRTIWWHFGGSDERREGGRGCLGKLMMGKVLRKVLV
Homology
[Close]
BLAST of CmaCh10G007680 vs. NCBI nr
Match: KAG7023703.1 (hypothetical protein SDJN02_14729, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 175.6 bits (444), Expect = 3.0e-40
Identity = 87/94 (92.55%), Postives = 89/94 (94.68%), Query Frame = 0 

Query: 1  MVGGGVGVEKGIGGSRGGQRLEMGRVPVMVGEIIRWQSMMFHANNVGSFGIDKDTRKKKK 60
          MVGGGVGVEKGIGGSRGGQRLEMGRVPVMVGEIIRWQSMMFHANNVGS GIDKDTRKKKK
Sbjct: 1  MVGGGVGVEKGIGGSRGGQRLEMGRVPVMVGEIIRWQSMMFHANNVGSLGIDKDTRKKKK 60

Query: 61 KKKKGSNELCSENALKGCVHMKAGVAEIGNYENC 95
          KKKKGSNELCSEN LKGCVHM+ G AEI +YENC
Sbjct: 61 KKKKGSNELCSENTLKGCVHMEVGEAEIADYENC 94

The following BLAST results are available for this feature:
BLAST of CmaCh10G007680 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh10G007680 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh10G007680 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7023703.13.0e-4092.55hypothetical protein SDJN02_14729, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CmaCh10G007680 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh10G007680.1CmaCh10G007680.1mRNA