CmaCh10G004020 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh10G004020
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	zinc finger protein 7-like
Location	Cma_Chr10: 1868546 .. 1868971 (+)
RNA-Seq Expression	CmaCh10G004020
Synteny	CmaCh10G004020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTTAAGCACCATCAGCAGCTCAACCTTGAGCTGGTTCTAGAGCCATCTTCACCTTCCTCTTCAGCTCCTGTGAGTCCAAATTGCGAGGCCGCCAGGGTTTTCTCATGTAACTATTGCAAGAGGAAGTTTTATAGCTCGCAGGCGTTGGGAGGTCACCAAAATGCTCATAAGCTGGAGAGGACGTTGGCGAAGAAGAGCAGGGAGATGAGGGCATACCGAGGAGACCATGAAAGCAATAATGTTATGATGAAGTCAAGCCATTTGTGGAAAGTTGAGACTCTAACAGCGCCACCACCTCTAGTAATTGATGGTGGGAGAGATCAGATAAGAGCTTTTCCCGCTGATCAAAATCTTCTTCTTCATCTTCATCATCATCAAGCTGATGATATTGGCCATCTTGACTTGTCTTTAAGGCTCTGA

mRNA sequence

ATGGAGTTTAAGCACCATCAGCAGCTCAACCTTGAGCTGGTTCTAGAGCCATCTTCACCTTCCTCTTCAGCTCCTGTGAGTCCAAATTGCGAGGCCGCCAGGGTTTTCTCATGTAACTATTGCAAGAGGAAGTTTTATAGCTCGCAGGCGTTGGGAGGTCACCAAAATGCTCATAAGCTGGAGAGGACGTTGGCGAAGAAGAGCAGGGAGATGAGGGCATACCGAGGAGACCATGAAAGCAATAATGTTATGATGAAGTCAAGCCATTTGTGGAAAGTTGAGACTCTAACAGCGCCACCACCTCTAGTAATTGATGGTGGGAGAGATCAGATAAGAGCTTTTCCCGCTGATCAAAATCTTCTTCTTCATCTTCATCATCATCAAGCTGATGATATTGGCCATCTTGACTTGTCTTTAAGGCTCTGA

Coding sequence (CDS)

ATGGAGTTTAAGCACCATCAGCAGCTCAACCTTGAGCTGGTTCTAGAGCCATCTTCACCTTCCTCTTCAGCTCCTGTGAGTCCAAATTGCGAGGCCGCCAGGGTTTTCTCATGTAACTATTGCAAGAGGAAGTTTTATAGCTCGCAGGCGTTGGGAGGTCACCAAAATGCTCATAAGCTGGAGAGGACGTTGGCGAAGAAGAGCAGGGAGATGAGGGCATACCGAGGAGACCATGAAAGCAATAATGTTATGATGAAGTCAAGCCATTTGTGGAAAGTTGAGACTCTAACAGCGCCACCACCTCTAGTAATTGATGGTGGGAGAGATCAGATAAGAGCTTTTCCCGCTGATCAAAATCTTCTTCTTCATCTTCATCATCATCAAGCTGATGATATTGGCCATCTTGACTTGTCTTTAAGGCTCTGA

Protein sequence

MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPPPLVIDGGRDQIRAFPADQNLLLHLHHHQADDIGHLDLSLRL

Homology

[Close]

BLAST of CmaCh10G004020 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.4e-21
Identity = 56/73 (76.71%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 3  FKHHQQLNLELVLEPSSPSSSAPVSPN----CEAARVFSCNYCKRKFYSSQALGGHQNAH 62
          +K+H QLNLELVLEPSS SSS+  S N     E  RVFSCNYC+RKFYSSQALGGHQNAH
Sbjct: 16 YKNH-QLNLELVLEPSSMSSSSSSSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAH 75

Query: 63 KLERTLAKKSREM 72
          KLERTLAKKSRE+
Sbjct: 76 KLERTLAKKSREL 87

[Close]

BLAST of CmaCh10G004020 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 6.4e-14
Identity = 45/84 (53.57%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 27  SPNCEA-ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHE------ 86
           S  CEA  RVFSCNYC+RKFYSSQALGGHQNAHK ERT+AK++  M    G H       
Sbjct: 49  STKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYT 108

Query: 87  SNNVMMKSSHLWKVETLTAPPPLV 104
           S+++ M++       TL+ P PLV
Sbjct: 109 SSSLGMQAHSGLLHHTLSQPQPLV 132

[Close]

BLAST of CmaCh10G004020 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 3.5e-12
Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 9   LNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKS 68
           L L    E S+P       P+  + RVFSCNYC+RKFYSSQALGGHQNAHK ERTLAK++
Sbjct: 59  LPLSSTSESSNPEQQQQQQPSV-SKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRA 118

Query: 69  REM 72
             M
Sbjct: 119 MRM 120

[Close]

BLAST of CmaCh10G004020 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.1e-11
Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 8   QLNLELVLEPSSPSSSAPVSPNCEAA--RVFSCNYCKRKFYSSQALGGHQNAHKLERTLA 67
           +LNL    + SS S+S       + A  RVFSCNYC+RKFYSSQALGGHQNAHK ERTLA
Sbjct: 38  ELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA 97

Query: 68  KKSR 70
           K+ +
Sbjct: 98  KRGQ 101

[Close]

BLAST of CmaCh10G004020 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.5e-10
Identity = 35/69 (50.72%), Postives = 43/69 (62.32%), Query Frame = 0


Query: 5  HHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTL 64
          H+    L L+      +S    S      ++FSCNYC+R FYSSQALGGHQNAHK ERTL
Sbjct: 30 HNSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTL 89

Query: 65 AKKSREMRA 74
          AK+ + M A
Sbjct: 90 AKRGQRMAA 98

[Close]

BLAST of CmaCh10G004020 vs. ExPASy TrEMBL
Match: A0A6J1JAI3 (zinc finger protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111485036 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 6.8e-75
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKL 60
           MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKL
Sbjct: 1   MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKL 60

Query: 61  ERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPPPLVIDGGRDQIRAFPADQNL 120
           ERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPPPLVIDGGRDQIRAFPADQNL
Sbjct: 61  ERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPPPLVIDGGRDQIRAFPADQNL 120

Query: 121 LLHLHHHQADDIGHLDLSLRL 142
           LLHLHHHQADDIGHLDLSLRL
Sbjct: 121 LLHLHHHQADDIGHLDLSLRL 141

[Close]

BLAST of CmaCh10G004020 vs. ExPASy TrEMBL
Match: A0A6J1E5I0 (zinc finger protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111429682 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 7.0e-72
Identity = 138/141 (97.87%), Postives = 138/141 (97.87%), Query Frame = 0


Query: 1   MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKL 60
           MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKL
Sbjct: 1   MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKL 60

Query: 61  ERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPPPLVIDGGRDQIRAFPADQNL 120
           ERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAP PLVIDGGRDQIRAFPADQNL
Sbjct: 61  ERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPSPLVIDGGRDQIRAFPADQNL 120

Query: 121 LLHLHHHQADDIGHLDLSLRL 142
           LL  HHHQADDIGHLDLSLRL
Sbjct: 121 LLLHHHHQADDIGHLDLSLRL 141

[Close]

BLAST of CmaCh10G004020 vs. ExPASy TrEMBL
Match: A0A6J1KNT5 (zinc finger protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111497321 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.3e-46
Identity = 108/149 (72.48%), Postives = 119/149 (79.87%), Query Frame = 0


Query: 1   MEFKHHQQLNLELVLEPSSPSS---SAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNA 60
           MEFKHH QLNL L LEPSS SS   SAPVSP C   RV+ CNYC+RKFYSSQALGGHQNA
Sbjct: 1   MEFKHH-QLNLGLFLEPSSSSSSSYSAPVSP-CSEQRVYPCNYCQRKFYSSQALGGHQNA 60

Query: 61  HKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPPPLVI-----DGGRDQIR 120
           HKLERTLAKK+RE+RAYRGDHE+ N+ M S+HLWKVET+TA  PLVI     DGGR +IR
Sbjct: 61  HKLERTLAKKNREIRAYRGDHET-NITMNSTHLWKVETITAAAPLVIGPHGVDGGR-EIR 120

Query: 121 AFPADQNLLLHLHHHQADDIGHLDLSLRL 142
            F A+ + L HLHHH  DDIGHLDLSLRL
Sbjct: 121 GFAAENHHLPHLHHHHQDDIGHLDLSLRL 145

[Close]

BLAST of CmaCh10G004020 vs. ExPASy TrEMBL
Match: A0A6J1BYT1 (protein LATE FLOWERING OS=Momordica charantia OX=3673 GN=LOC111006983 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 9.0e-27
Identity = 95/161 (59.01%), Postives = 104/161 (64.60%), Query Frame = 0


Query: 1   MEFKHHQQLNLELVLEPS--SPSSSAPV------SPNC--EAARVFSCNYCKRKFYSSQA 60
           MEFK H QLNLELVLEPS  S SSS+ V      +PNC  + ARVFSCNYCKRKFYSSQA
Sbjct: 1   MEFK-HSQLNLELVLEPSSYSYSSSSAVDHVIGSTPNCDDDQARVFSCNYCKRKFYSSQA 60

Query: 61  LGGHQNAHKLERTLAKKSREMR--AYRGDHESN---NVMM-KSSHLWKVETLTAPPPLVI 120
           LGGHQNAHKLERTLAKKSRE+R  AY GD   N   N+MM  S+HLWK+ET    PP VI
Sbjct: 61  LGGHQNAHKLERTLAKKSREIRGGAYAGDESCNMNMNMMMNNSNHLWKIET----PPTVI 120

Query: 121 D----GGRDQIRAFPADQNLLLHLHHHQADDIGHLDLSLRL 142
                GG D   A   D  +      +Q      LDLSLRL
Sbjct: 121 GLCPRGGHD-AAASGRDHQMRACRPENQ-----DLDLSLRL 150

[Close]

BLAST of CmaCh10G004020 vs. ExPASy TrEMBL
Match: A0A6J5TF83 (C2H2-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS1424 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 5.6e-21
Identity = 72/144 (50.00%), Postives = 89/144 (61.81%), Query Frame = 0


Query: 6   HQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLA 65
           + Q+NL+LVLEPS  SSS+ +SP+ E  RVFSCNYC+RKFYSSQALGGHQNAHKLERTLA
Sbjct: 15  NDQVNLDLVLEPSYTSSSSSLSPS-EQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLA 74

Query: 66  KKSREM-----RAYRGDHE---SNNVMMKSSHLWKVETLTAPPPLVIDGGRDQIRAFPAD 125
           KKSRE      RA+ G ++    +N    SSH  ++        L    G      F   
Sbjct: 75  KKSREQLSSAARAHGGSNQRPAGSNSFSDSSHPRQIHEAHNLGGLKEHQG--HAGRFAGH 134

Query: 126 QNLLLHLHHHQADDIGHLDLSLRL 142
            N      ++  ++IGHLDLSLRL
Sbjct: 135 MNCGYRPENNVEEEIGHLDLSLRL 155

[Close]

BLAST of CmaCh10G004020 vs. NCBI nr
Match: XP_022987492.1 (zinc finger protein 7-like [Cucurbita maxima])

HSP 1 Score: 289.7 bits (740), Expect = 1.4e-74
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKL 60
           MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKL
Sbjct: 1   MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKL 60

Query: 61  ERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPPPLVIDGGRDQIRAFPADQNL 120
           ERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPPPLVIDGGRDQIRAFPADQNL
Sbjct: 61  ERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPPPLVIDGGRDQIRAFPADQNL 120

Query: 121 LLHLHHHQADDIGHLDLSLRL 142
           LLHLHHHQADDIGHLDLSLRL
Sbjct: 121 LLHLHHHQADDIGHLDLSLRL 141

[Close]

BLAST of CmaCh10G004020 vs. NCBI nr
Match: KAG6589714.1 (Zinc finger protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023394.1 Zinc finger protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 287.0 bits (733), Expect = 9.1e-74
Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKL 60
           MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKL
Sbjct: 1   MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKL 60

Query: 61  ERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPPPLVIDGGRDQIRAFPADQNL 120
           ERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPPPLVIDGGRDQIRAFPADQNL
Sbjct: 61  ERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPPPLVIDGGRDQIRAFPADQNL 120

Query: 121 LLHLHHHQADDIGHLDLSLRL 142
           LLH HHHQADDIGHLDLSLRL
Sbjct: 121 LLHHHHHQADDIGHLDLSLRL 141

[Close]

BLAST of CmaCh10G004020 vs. NCBI nr
Match: XP_023516743.1 (zinc finger protein 7-like [Cucurbita pepo subsp. pepo] >XP_023521837.1 zinc finger protein 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 279.6 bits (714), Expect = 1.4e-71
Identity = 139/142 (97.89%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKL 60
           MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKL
Sbjct: 1   MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKL 60

Query: 61  ERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPPPLVIDGGRDQIRAFPADQNL 120
           ERTLAKKSREMRAYRGDH SNNVMMKSSHLWKVETLTAPPPLVIDGGRDQIRAFPADQNL
Sbjct: 61  ERTLAKKSREMRAYRGDHGSNNVMMKSSHLWKVETLTAPPPLVIDGGRDQIRAFPADQNL 120

Query: 121 LLHLHHH-QADDIGHLDLSLRL 142
           LLH HHH QADDIGHLDLSLRL
Sbjct: 121 LLHHHHHQQADDIGHLDLSLRL 142

[Close]

BLAST of CmaCh10G004020 vs. NCBI nr
Match: XP_022921390.1 (zinc finger protein 7 [Cucurbita moschata])

HSP 1 Score: 279.6 bits (714), Expect = 1.4e-71
Identity = 138/141 (97.87%), Postives = 138/141 (97.87%), Query Frame = 0


Query: 1   MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKL 60
           MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKL
Sbjct: 1   MEFKHHQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKL 60

Query: 61  ERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPPPLVIDGGRDQIRAFPADQNL 120
           ERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAP PLVIDGGRDQIRAFPADQNL
Sbjct: 61  ERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPSPLVIDGGRDQIRAFPADQNL 120

Query: 121 LLHLHHHQADDIGHLDLSLRL 142
           LL  HHHQADDIGHLDLSLRL
Sbjct: 121 LLLHHHHQADDIGHLDLSLRL 141

[Close]

BLAST of CmaCh10G004020 vs. NCBI nr
Match: XP_023003862.1 (zinc finger protein 2-like [Cucurbita maxima])

HSP 1 Score: 195.7 bits (496), Expect = 2.7e-46
Identity = 108/149 (72.48%), Postives = 119/149 (79.87%), Query Frame = 0


Query: 1   MEFKHHQQLNLELVLEPSSPSS---SAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNA 60
           MEFKHH QLNL L LEPSS SS   SAPVSP C   RV+ CNYC+RKFYSSQALGGHQNA
Sbjct: 1   MEFKHH-QLNLGLFLEPSSSSSSSYSAPVSP-CSEQRVYPCNYCQRKFYSSQALGGHQNA 60

Query: 61  HKLERTLAKKSREMRAYRGDHESNNVMMKSSHLWKVETLTAPPPLVI-----DGGRDQIR 120
           HKLERTLAKK+RE+RAYRGDHE+ N+ M S+HLWKVET+TA  PLVI     DGGR +IR
Sbjct: 61  HKLERTLAKKNREIRAYRGDHET-NITMNSTHLWKVETITAAAPLVIGPHGVDGGR-EIR 120

Query: 121 AFPADQNLLLHLHHHQADDIGHLDLSLRL 142
            F A+ + L HLHHH  DDIGHLDLSLRL
Sbjct: 121 GFAAENHHLPHLHHHHQDDIGHLDLSLRL 145

[Close]

BLAST of CmaCh10G004020 vs. TAIR 10
Match: AT5G57520.1 (zinc finger protein 2 )

HSP 1 Score: 102.1 bits (253), Expect = 3.9e-22
Identity = 56/73 (76.71%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 3  FKHHQQLNLELVLEPSSPSSSAPVSPN----CEAARVFSCNYCKRKFYSSQALGGHQNAH 62
          +K+H QLNLELVLEPSS SSS+  S N     E  RVFSCNYC+RKFYSSQALGGHQNAH
Sbjct: 16 YKNH-QLNLELVLEPSSMSSSSSSSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAH 75

Query: 63 KLERTLAKKSREM 72
          KLERTLAKKSRE+
Sbjct: 76 KLERTLAKKSREL 87

[Close]

BLAST of CmaCh10G004020 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 78.6 bits (192), Expect = 4.6e-15
Identity = 45/84 (53.57%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 27  SPNCEA-ARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREMRAYRGDHE------ 86
           S  CEA  RVFSCNYC+RKFYSSQALGGHQNAHK ERT+AK++  M    G H       
Sbjct: 49  STKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYT 108

Query: 87  SNNVMMKSSHLWKVETLTAPPPLV 104
           S+++ M++       TL+ P PLV
Sbjct: 109 SSSLGMQAHSGLLHHTLSQPQPLV 132

[Close]

BLAST of CmaCh10G004020 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 72.8 bits (177), Expect = 2.5e-13
Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 9   LNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKS 68
           L L    E S+P       P+  + RVFSCNYC+RKFYSSQALGGHQNAHK ERTLAK++
Sbjct: 59  LPLSSTSESSNPEQQQQQQPSV-SKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRA 118

Query: 69  REM 72
             M
Sbjct: 119 MRM 120

[Close]

BLAST of CmaCh10G004020 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 68.9 bits (167), Expect = 3.6e-12
Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 8   QLNLELVLEPSSPSSSAPVSPNCEAA--RVFSCNYCKRKFYSSQALGGHQNAHKLERTLA 67
           +LNL    + SS S+S       + A  RVFSCNYC+RKFYSSQALGGHQNAHK ERTLA
Sbjct: 38  ELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA 97

Query: 68  KKSR 70
           K+ +
Sbjct: 98  KRGQ 101

[Close]

BLAST of CmaCh10G004020 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 3.6e-12
Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = 0


Query: 6   HQQLNLELVLEPSSPSSSAPVSPNCEAARVFSCNYCKRKFYSSQALGGHQNAHKLERTLA 65
           +Q+LNL   LE    + S   S + E  ++FSCNYC+R FYSSQALGGHQNAHK ERTLA
Sbjct: 75  NQELNLLDCLETGVVTPSFNGSTSTE-QKLFSCNYCQRTFYSSQALGGHQNAHKRERTLA 134

Query: 66  KKSREM 72
           K+ + M
Sbjct: 135 KRGQRM 139

The following BLAST results are available for this feature:

BLAST of CmaCh10G004020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39261	5.4e-21	76.71	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]
Q39266	6.4e-14	53.57	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q39263	3.5e-12	60.32	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q42485	5.1e-11	60.94	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39262	2.5e-10	50.72	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]

BLAST of CmaCh10G004020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JAI3	6.8e-75	100.00	zinc finger protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111485036 PE=4 SV=1	[more]
A0A6J1E5I0	7.0e-72	97.87	zinc finger protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111429682 PE=4 SV=1	[more]
A0A6J1KNT5	1.3e-46	72.48	zinc finger protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111497321 PE=4 SV=1	[more]
A0A6J1BYT1	9.0e-27	59.01	protein LATE FLOWERING OS=Momordica charantia OX=3673 GN=LOC111006983 PE=4 SV=1	[more]
A0A6J5TF83	5.6e-21	50.00	C2H2-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS...	[more]

BLAST of CmaCh10G004020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022987492.1	1.4e-74	100.00	zinc finger protein 7-like [Cucurbita maxima]	[more]
KAG6589714.1	9.1e-74	99.29	Zinc finger protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG70233...	[more]
XP_023516743.1	1.4e-71	97.89	zinc finger protein 7-like [Cucurbita pepo subsp. pepo] >XP_023521837.1 zinc fin...	[more]
XP_022921390.1	1.4e-71	97.87	zinc finger protein 7 [Cucurbita moschata]	[more]
XP_023003862.1	2.7e-46	72.48	zinc finger protein 2-like [Cucurbita maxima]	[more]

BLAST of CmaCh10G004020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57520.1	3.9e-22	76.71	zinc finger protein 2	[more]
AT1G24625.1	4.6e-15	53.57	zinc finger protein 7	[more]
AT1G66140.1	2.5e-13	60.32	zinc finger protein 4	[more]
AT1G80730.1	3.6e-12	60.94	zinc-finger protein 1	[more]
AT5G10970.1	3.6e-12	57.58	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 57..77
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 25..92 e-value: 2.7E-7 score: 32.3
None	No IPR available	PANTHER	PTHR45730:SF76	BNAC02G44440D PROTEIN	coord: 3..141
None	No IPR available	PANTHER	PTHR45730	ZINC FINGER PROTEIN JAGGED	coord: 3..141
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 38..58
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 36..63 score: 11.073551
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 34..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G004020.1	CmaCh10G004020.1	mRNA