CmaCh10G003600 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh10G003600
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	glutaredoxin-C4-like
Location	Cma_Chr10: 1662758 .. 1666420 (-)
RNA-Seq Expression	CmaCh10G003600
Synteny	CmaCh10G003600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGAGGTTAGTATTTTTTGTGTTTATTTTCTTGGTTGTTTAGTACACTTTGTAGAGTAATATGCTGATTTCTCACTTCATTCTTAGCCTTATAGTTCCCATTTGATGGAGACGGTTCTCACACCATCAATAGTGAATATTATTTATTTGGAGGAAGAGGATGTTGTAGATCATATATGGTTACATACATTGTGAGCTCTGCCCTTTTACTCATTTCATAGATGAAAACTTTGAACATTTCTTGGACTTGCTGTTCAAATCACTAGGCCGTAGTATGAACATTTCCTTCTTGATGATAGTGAGCGTTTCCTACATGTTTCTTAGTACTCTTATTGAATTCTCGTCATTGCTTCAATAATATGTTTTTTCCACATGTTTAGAGGCATCGGGAGAAAGTTAGAGTCAAGTGTTTCATGGTGGTGGGTTGGTCTTTCTAAAACAATTAGAAACCCAACCCGACCTAACCCGTTTTCACCTCTAATGTTTAGAGGCATCGAACAAAATGTTGGAGTCTAGTATTGTGAGATCCCACCTCGGTTAGAGAAGGGAACGAAACATCACTTATAAGGGTGTGAAAACCTCTCCTTATCCCTGTCAGACACGTTTTAAAATCTAGAGAGGAAGCATTTAAAGTAGAGTTCAAAGAGGACAATATCCGGTGGATTTGGGCTGTTACTAGTATTCTGAAACGATTTAAGAAACCAGTTGGGATTTGCCATCCCGACCCATTTTCACCATTCAACTTGGTATAAATTTGATGCAGAGGAATTTGGGAAGGAAAAGGGTGCTCATTGAAATCCAGACGTAGCTATGCATTTATTGTTAGGAAAGAATTCTATTTTCATTCTAATTGGAAACAACCAGATCCTCCTGTGGCCATGAATCCAGGGGCCGAGACATTGGCTTCACTATGCCTGTAGCCCATTACACAATCCACTGTGCATTTCCTCATGTTTATGAACTTGAAGTGCAATAGTATAAATTCAAATTCCTCTTCTTTTGTTTTTACAAGCAGTAAGTTATTGGGTTTTTTTCTTTTCTTCTGATCATTGACAATGGTGTCAGCTTGAGTTCATCTAGACTATTTTCATGGGAGAATCAGTTGATCCTACTATATTTGGCTAACACGTGTTGATTTCATATTACAATATCATTTGTCTTCATATTTGAGATCTATTTTGTAATAGTCAAACAGATATTATCTGCTTTTACCTGTTACGTACCACTGTCAGTTGCCAGTCTCACGATTAGGTTTCCACACACATATAAGAAATATTTCATTTCTTTCTTAAACCGATGTAAAATTTTATAATCTACTCTTTGGAAGCTAGCATCCACTCTTTGGAAGCTAGCGTCCTTGTTGGCTGTTTTAGCTCGTTATGTATCACCGTCAACCTCACAGATTTAAAGTGCGTATACTAGGGAGAGGTTTCTACACCCAATTGATGTGGGATGTTATATTATTCCATTTTTGTTTATGTAATTTCAAAGGTCTAAATTTGGTATAGTTTGAAATATGTTTTTAAAAATTGAATTTAGAGATATAAAAAAGAGTAATTTCCATTCCAGAAAAAACTTGGGATATTTTTTTCCTTACAGAGTGAATGCTAATTAATTTTTATCTTTAACCTTAAATTAATAATATAAAGTCATTTTAAATTTTTTTGAAATTATAAATATTAAATTTCGAAATTTATAATTAACTAGAATGAATTAAGTCGAACAACCACCCGTGACTTGTTGCTGTTATTATATTATATTATATTATTATTATTATTATTACAGAAATATAGATTATTTATTTATTTATTTATTTGCAACCTAAAAAGCGTAATATCTTACAAGAAGTGTGAATATACAAGAGATGCTGAATTTCAGTAATTGTCTTCTCTAAAATTACGCTTACGAGCAATTAATCGCCAAACGCAGAAACCTCACCGGAAGAAGGTTAATTGCAGCCTGGAATTTGGATCAATGGCAGTGACGATGAGTATGAGGAAGATGCTGACGGTATCAGCAGCTATGGTCTGCGCCGTAGCTGTAGCGTCTTTATACGGGGCCTCAGCTTCCACGGAAACACGCTTCATCAAGAACACCATCGCCTCGCATCAGATCGTCATCTTCTCCAAGTCCTACTGCCCGTAATTTTCTTCTCATTCCTCTTTTCTCTTCTTAATCGATTTATTCAGACTCCATTGTGGATCTATTCGTCTCATTTCTCCAAATCGACTTTTGTTGTTCCGTTCTTGACCCGCAGTGGCCATGTTTTCTATTACTTTAAGTTTCGTTGCCCTACATTTGGAAGCAGATCGAGGAAGGGGCTAGTTTCCTCTTCTCTTAATTGTTGTTTTTGTGCATACAGGTACTGTAGAAGGGCAAAAGCTGTTTTCAAGGAATTGAACAAAGTTCCTTATGTTGTTGAGCTGGATCAAAGAGGTACTTGCATAATCTGCCTTTTTCTCGTTCTTTTTATCAAAAGTAGCAATATCACCATGGCTTAAATCTGATTGAAACTCAGTATGTTTGTTTTGTGCTCCTTTTATTGCACGCCTTCTGTTCTGGCACTGCCAGTATATCTAGATTTCGGACAATTTCATATGAAAATCTTGTTCTGGCTTATGCTCTCCGCATTATGAAAGTATTGGTTGGGATATTACACTTGATATGGGCATGTTGGTATCTAGATTTCGGACAATTTCATATGAAAATCTTCTCTTATATCTTTTTTGATGATTTTTTTTATCATTATTTAAATGAACGATCTTTTCAACTTAATGGTGACGGAGTAGTAAGAGAATTTGTGCTTAGTATTGCCTCCAGCCTCTCGAAATGGTGACTGCCTGCGACTGGAATATTTATGTATTAGGTATTGTGACATGATTCTCTGTAAAATGCATTCCGCTTCGAAACTAACATGGTCGTTTGGGATCGTCTATTCTCTTCATCTAAAATCCTCACTCTGGCTGAACATATGGCCACTGGTTTAGGCATATACTCTTGACTAAGTAGTTAGAGGTTCGAATCCCCCACCCCATAGACGTGGTTGAACTAAAAATGTTCAAATTACTTATATCTAATCAGATCACACACTCAGATCTACCCCCCAAACAAGAATGGAAGGTAATTCCTTCTAGTTTGTGTTCTTTTGGGAGTTAAGAGAGGGAGGGCAAAGAGTGGGGGGATGGTAGAGGAAGGTAGAAAACAGCAATGAAAGGGAGAAACTGTGTGCAAGAGTGAGTCCTATTAGCTGTTGCCTGAAATGTCCATTTACTGACAAAACGCTTAGATTATGGGTCGACTAATTATGTATTATGTTGTACAAAATCCTCTTATTTTTATCTTTTTAGTTGATTTGCAGGTTCTTTGTTATGTTTTTTCTCTTTTGTTTCCCTTTTCGACATGGGTGGGGAGAATTCAAGCTTTGGATGAATTCTCTAAACGAACTAGCAAAAGGGTTATCAGTAAACATATATCTGGCTTTTGTTTCCATATCTATTTATATCTGGTTGTATTCCCTTATCTAAAGGTTAATAATACTCCTAGAATTTGGATCTGTATCTCACAGAGGATGGCAGTGACATTCAAGATGCTTTTATGGCACTCATAGGAAGGCGCACTGTACCTCAAGTGTTCGTAAATGGAAAACACATAGGTGGATCA

mRNA sequence

ATGAACGAGAAACCTCACCGGAAGAAGGTTAATTGCAGCCTGGAATTTGGATCAATGGCAGTGACGATGAGTATGAGGAAGATGCTGACGGTATCAGCAGCTATGGTCTGCGCCGTAGCTGTAGCGTCTTTATACGGGGCCTCAGCTTCCACGGAAACACGCTTCATCAAGAACACCATCGCCTCGCATCAGATCGTCATCTTCTCCAAGTCCTACTGCCCGTACTGTAGAAGGGCAAAAGCTGTTTTCAAGGAATTGAACAAAGTTCCTTATGTTGTTGAGCTGGATCAAAGAGAGGATGGCAGTGACATTCAAGATGCTTTTATGGCACTCATAGGAAGGCGCACTGTACCTCAAGTGTTCGTAAATGGAAAACACATAGGTGGATCA

Coding sequence (CDS)

ATGAACGAGAAACCTCACCGGAAGAAGGTTAATTGCAGCCTGGAATTTGGATCAATGGCAGTGACGATGAGTATGAGGAAGATGCTGACGGTATCAGCAGCTATGGTCTGCGCCGTAGCTGTAGCGTCTTTATACGGGGCCTCAGCTTCCACGGAAACACGCTTCATCAAGAACACCATCGCCTCGCATCAGATCGTCATCTTCTCCAAGTCCTACTGCCCGTACTGTAGAAGGGCAAAAGCTGTTTTCAAGGAATTGAACAAAGTTCCTTATGTTGTTGAGCTGGATCAAAGAGAGGATGGCAGTGACATTCAAGATGCTTTTATGGCACTCATAGGAAGGCGCACTGTACCTCAAGTGTTCGTAAATGGAAAACACATAGGTGGATCA

Protein sequence

MNEKPHRKKVNCSLEFGSMAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS

Homology

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BLAST of CmaCh10G003600 vs. ExPASy Swiss-Prot
Match: Q8LFQ6 (Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2)

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-29
Identity = 63/109 (57.80%), Postives = 87/109 (79.82%), Query Frame = 0


Query: 23  MSMRKMLTVSAAMVCAVAVASLYGASAST-ETRFIKNTIASHQIVIFSKSYCPYCRRAKA 82
           M+M + +++   +V  V   S+  ++AS+ E  F+K TI+SH+IVIFSKSYCPYC++AK+
Sbjct: 1   MTMFRSISMVMLLVALVTFISMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKS 60

Query: 83  VFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS 131
           VF+EL++VPYVVELD+REDG  IQ A   ++GRRTVPQVF+NGKH+GGS
Sbjct: 61  VFRELDQVPYVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGS 109

[Close]

BLAST of CmaCh10G003600 vs. ExPASy Swiss-Prot
Match: Q0DAE4 (Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 5.0e-29
Identity = 65/107 (60.75%), Postives = 83/107 (77.57%), Query Frame = 0


Query: 26  RKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVFK- 85
           R+    +AA++   A+ S    +AS ++ F+K+T+ +H +VIFSKSYCPYCRRAKAVFK 
Sbjct: 7   RRFGMAAAALIALAALGSAASGTAS-KSSFVKSTVKAHDVVIFSKSYCPYCRRAKAVFKE 66

Query: 86  -ELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS 131
            EL K PYVVELDQREDG +IQDA   ++GRRTVPQVFV+GKH+GGS
Sbjct: 67  LELKKEPYVVELDQREDGWEIQDALSDMVGRRTVPQVFVHGKHLGGS 112

[Close]

BLAST of CmaCh10G003600 vs. ExPASy Swiss-Prot
Match: Q9FVX1 (Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.7e-25
Identity = 56/110 (50.91%), Postives = 77/110 (70.00%), Query Frame = 0


Query: 21  VTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRRAK 80
           V  S R+++  +  +   +   S    +A++ + F++N I S++IVIFSKSYCPYC R+K
Sbjct: 2   VDQSPRRVVVAALLLFVVLCDLSNSAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSK 61

Query: 81  AVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS 131
            +F +L + P+VVELDQREDG  IQ   +  +GRRTVPQVFVNGKHIGGS
Sbjct: 62  RIFSQLKEEPFVVELDQREDGDQIQYELLEFVGRRTVPQVFVNGKHIGGS 111

[Close]

BLAST of CmaCh10G003600 vs. ExPASy Swiss-Prot
Match: Q6H628 (Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 7.0e-23
Identity = 47/84 (55.95%), Postives = 65/84 (77.38%), Query Frame = 0


Query: 47  ASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQREDGSDIQD 106
           A+  + + F++N I S++I IFSK+YCPY  RAK +F++L + PY+VELD REDG +IQ 
Sbjct: 25  AATRSPSAFVQNAIYSNRITIFSKTYCPYSMRAKRIFRDLKENPYIVELDLREDGREIQS 84

Query: 107 AFMALIGRRTVPQVFVNGKHIGGS 131
             + L+GR TVPQVFVNG+H+GGS
Sbjct: 85  VLLDLVGRHTVPQVFVNGQHVGGS 108

[Close]

BLAST of CmaCh10G003600 vs. ExPASy Swiss-Prot
Match: P55142 (Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 5.7e-17
Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 0


Query: 57  KNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRT 116
           K T+AS  +V++SKSYCP+C R K +F++L      +ELD   DGS++Q A     G+RT
Sbjct: 7   KETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRT 66

Query: 117 VPQVFVNGKHIGG 130
           VP VF+NGKHIGG
Sbjct: 67  VPNVFINGKHIGG 79

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BLAST of CmaCh10G003600 vs. ExPASy TrEMBL
Match: A0A6J1JA45 (glutaredoxin-C4-like OS=Cucurbita maxima OX=3661 GN=LOC111484927 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.9e-53
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 19  MAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 78
           MAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 79  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS 131
           AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS 112

[Close]

BLAST of CmaCh10G003600 vs. ExPASy TrEMBL
Match: A0A6J1E059 (glutaredoxin-C4-like OS=Cucurbita moschata OX=3662 GN=LOC111429636 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.3e-52
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 19  MAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 78
           MA TMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 79  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS 131
           AKAVFKELNKVPYVVELDQREDGS+IQDAFMALIGRRTVPQVFVNGKHIGGS
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSEIQDAFMALIGRRTVPQVFVNGKHIGGS 112

[Close]

BLAST of CmaCh10G003600 vs. ExPASy TrEMBL
Match: A0A0A0LXH3 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G427520 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.3e-40
Identity = 90/112 (80.36%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 19  MAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 78
           MA T+SMRK+LT SAAMVCAVA+ASL GAS+S E+ FIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCGASSSPES-FIKNTIASHQIVIFSKSYCPYCRR 60

Query: 79  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS 131
           AKAVFKEL+KVP+VVELDQR+DGS +Q+A   L GRRTVPQVF++GKHIGGS
Sbjct: 61  AKAVFKELHKVPHVVELDQRDDGSSLQNALSVLFGRRTVPQVFIDGKHIGGS 111

[Close]

BLAST of CmaCh10G003600 vs. ExPASy TrEMBL
Match: A0A5D3DXQ7 (Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002030 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.0e-40
Identity = 90/112 (80.36%), Postives = 101/112 (90.18%), Query Frame = 0


Query: 19  MAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 78
           MA T+SMRK+LT SAAMVCAVA+ASL  AS+S E+ FIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCRASSSPES-FIKNTIASHQIVIFSKSYCPYCRR 60

Query: 79  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS 131
           AKAVFKELNKVP+VVELDQR+DGS +Q+A   L GRRTVPQVF++GKHIGGS
Sbjct: 61  AKAVFKELNKVPHVVELDQRDDGSALQNALSVLFGRRTVPQVFIDGKHIGGS 111

[Close]

BLAST of CmaCh10G003600 vs. ExPASy TrEMBL
Match: A0A5A7UQP8 (Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G005140 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.9e-39
Identity = 89/112 (79.46%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 19  MAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 78
           MA T+SMRK+LT SAAMVCAVA+ASL  AS+S E+ FIKN IASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCRASSSPES-FIKNAIASHQIVIFSKSYCPYCRR 60

Query: 79  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS 131
           AKAVFKELNKVP+VVELDQR+DGS +Q+A   L GRRTVPQVF++GKHIGGS
Sbjct: 61  AKAVFKELNKVPHVVELDQRDDGSALQNALSVLFGRRTVPQVFIDGKHIGGS 111

[Close]

BLAST of CmaCh10G003600 vs. NCBI nr
Match: KAG6589674.1 (Glutaredoxin-C4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 224.2 bits (570), Expect = 6.7e-55
Identity = 115/116 (99.14%), Postives = 115/116 (99.14%), Query Frame = 0


Query: 15  EFGSMAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCP 74
           EFGSMA TMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCP
Sbjct: 41  EFGSMAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCP 100

Query: 75  YCRRAKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS 131
           YCRRAKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS
Sbjct: 101 YCRRAKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS 156

[Close]

BLAST of CmaCh10G003600 vs. NCBI nr
Match: XP_022987347.1 (glutaredoxin-C4-like [Cucurbita maxima])

HSP 1 Score: 217.2 bits (552), Expect = 8.1e-53
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 19  MAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 78
           MAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 79  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS 131
           AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS 112

[Close]

BLAST of CmaCh10G003600 vs. NCBI nr
Match: KAG7023354.1 (Glutaredoxin-C4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 215.7 bits (548), Expect = 2.4e-52
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 19  MAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 78
           MA TMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 79  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS 131
           AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS 112

[Close]

BLAST of CmaCh10G003600 vs. NCBI nr
Match: XP_023516627.1 (glutaredoxin-C4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.5 bits (545), Expect = 5.3e-52
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 19  MAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 78
           MA TMSMRKMLT+SAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATMSMRKMLTLSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 79  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS 131
           AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS 112

[Close]

BLAST of CmaCh10G003600 vs. NCBI nr
Match: XP_022921332.1 (glutaredoxin-C4-like [Cucurbita moschata])

HSP 1 Score: 214.2 bits (544), Expect = 6.9e-52
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 19  MAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 78
           MA TMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 79  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS 131
           AKAVFKELNKVPYVVELDQREDGS+IQDAFMALIGRRTVPQVFVNGKHIGGS
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSEIQDAFMALIGRRTVPQVFVNGKHIGGS 112

[Close]

BLAST of CmaCh10G003600 vs. TAIR 10
Match: AT5G20500.1 (Glutaredoxin family protein )

HSP 1 Score: 130.6 bits (327), Expect = 9.3e-31
Identity = 63/109 (57.80%), Postives = 87/109 (79.82%), Query Frame = 0


Query: 23  MSMRKMLTVSAAMVCAVAVASLYGASAST-ETRFIKNTIASHQIVIFSKSYCPYCRRAKA 82
           M+M + +++   +V  V   S+  ++AS+ E  F+K TI+SH+IVIFSKSYCPYC++AK+
Sbjct: 1   MTMFRSISMVMLLVALVTFISMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKS 60

Query: 83  VFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS 131
           VF+EL++VPYVVELD+REDG  IQ A   ++GRRTVPQVF+NGKH+GGS
Sbjct: 61  VFRELDQVPYVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGS 109

[Close]

BLAST of CmaCh10G003600 vs. TAIR 10
Match: AT1G77370.1 (Glutaredoxin family protein )

HSP 1 Score: 115.2 bits (287), Expect = 4.1e-26
Identity = 56/110 (50.91%), Postives = 77/110 (70.00%), Query Frame = 0


Query: 21  VTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRRAK 80
           V  S R+++  +  +   +   S    +A++ + F++N I S++IVIFSKSYCPYC R+K
Sbjct: 2   VDQSPRRVVVAALLLFVVLCDLSNSAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSK 61

Query: 81  AVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGS 131
            +F +L + P+VVELDQREDG  IQ   +  +GRRTVPQVFVNGKHIGGS
Sbjct: 62  RIFSQLKEEPFVVELDQREDGDQIQYELLEFVGRRTVPQVFVNGKHIGGS 111

[Close]

BLAST of CmaCh10G003600 vs. TAIR 10
Match: AT2G20270.1 (Thioredoxin superfamily protein )

HSP 1 Score: 80.9 bits (198), Expect = 8.5e-16
Identity = 39/91 (42.86%), Postives = 59/91 (64.84%), Query Frame = 0


Query: 40  AVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQ-R 99
           A++S   +S ST    +K T+A + +V++SK++C Y  + K++FK L   P VVELDQ  
Sbjct: 62  AMSSSSSSSGSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLG 121

Query: 100 EDGSDIQDAFMALIGRRTVPQVFVNGKHIGG 130
            +GS +Q+    + G+ TVP VF+ GKHIGG
Sbjct: 122 SEGSQLQNVLEKITGQYTVPNVFIGGKHIGG 152

[Close]

BLAST of CmaCh10G003600 vs. TAIR 10
Match: AT5G40370.1 (Glutaredoxin family protein )

HSP 1 Score: 78.6 bits (192), Expect = 4.2e-15
Identity = 35/73 (47.95%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 57  KNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRT 116
           K  + S  +V+FSK+YCPYC R K + ++L      VELD   DGS IQ       G+RT
Sbjct: 7   KEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQRT 66

Query: 117 VPQVFVNGKHIGG 130
           VP VF+ G HIGG
Sbjct: 67  VPNVFIGGNHIGG 79

[Close]

BLAST of CmaCh10G003600 vs. TAIR 10
Match: AT5G63030.1 (Thioredoxin superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-14
Identity = 32/73 (43.84%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 57  KNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRT 116
           K  ++++ +V+FSK+YC YC+R K +  +L     V+ELD+  DG +IQ A     G+ T
Sbjct: 23  KEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMSDGGEIQSALSEWTGQTT 82

Query: 117 VPQVFVNGKHIGG 130
           VP VF+ G HIGG
Sbjct: 83  VPNVFIKGNHIGG 95

The following BLAST results are available for this feature:

BLAST of CmaCh10G003600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFQ6	1.3e-29	57.80	Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2	[more]
Q0DAE4	5.0e-29	60.75	Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2	[more]
Q9FVX1	5.7e-25	50.91	Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1	[more]
Q6H628	7.0e-23	55.95	Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2...	[more]
P55142	5.7e-17	52.05	Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2	[more]

BLAST of CmaCh10G003600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JA45	3.9e-53	100.00	glutaredoxin-C4-like OS=Cucurbita maxima OX=3661 GN=LOC111484927 PE=3 SV=1	[more]
A0A6J1E059	3.3e-52	98.21	glutaredoxin-C4-like OS=Cucurbita moschata OX=3662 GN=LOC111429636 PE=3 SV=1	[more]
A0A0A0LXH3	1.3e-40	80.36	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G42752...	[more]
A0A5D3DXQ7	5.0e-40	80.36	Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629...	[more]
A0A5A7UQP8	1.9e-39	79.46	Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274...	[more]

BLAST of CmaCh10G003600 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589674.1	6.7e-55	99.14	Glutaredoxin-C4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022987347.1	8.1e-53	100.00	glutaredoxin-C4-like [Cucurbita maxima]	[more]
KAG7023354.1	2.4e-52	99.11	Glutaredoxin-C4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023516627.1	5.3e-52	98.21	glutaredoxin-C4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022921332.1	6.9e-52	98.21	glutaredoxin-C4-like [Cucurbita moschata]	[more]

BLAST of CmaCh10G003600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20500.1	9.3e-31	57.80	Glutaredoxin family protein	[more]
AT1G77370.1	4.1e-26	50.91	Glutaredoxin family protein	[more]
AT2G20270.1	8.5e-16	42.86	Thioredoxin superfamily protein	[more]
AT5G40370.1	4.2e-15	47.95	Glutaredoxin family protein	[more]
AT5G63030.1	1.6e-14	43.84	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 65..83 score: 47.81 coord: 124..130 score: 31.25 coord: 110..123 score: 51.79
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 65..127 e-value: 3.0E-20 score: 72.2
IPR011899	Glutaredoxin, eukaryotic/virial	TIGRFAM	TIGR02180	TIGR02180	coord: 65..130 e-value: 9.5E-26 score: 87.8
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 45..130 e-value: 2.1E-31 score: 109.9
None	No IPR available	PIRSR	PIRSR001488-1	PIRSR001488-1	coord: 25..84 e-value: 0.1 score: 10.0
None	No IPR available	PANTHER	PTHR45694:SF19	BNAA02G04900D PROTEIN	coord: 28..130
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 28..130
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 53..130 score: 20.003941
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 65..130 e-value: 1.68513E-39 score: 125.345
IPR011767	Glutaredoxin active site	PROSITE	PS00195	GLUTAREDOXIN_1	coord: 67..82
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 55..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G003600.1	CmaCh10G003600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004362	glutathione-disulfide reductase (NADPH) activity
molecular_function	GO:0097573	glutathione oxidoreductase activity