CmaCh10G000830 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh10G000830
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	28 kDa ribonucleoprotein, chloroplastic-like
Location	Cma_Chr10: 346447 .. 348394 (-)
RNA-Seq Expression	CmaCh10G000830
Synteny	CmaCh10G000830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTCTTCAGCCACTTCAATTTTGAAGCCCTTATCCAAGGCAGATTCTTGCCTTCTCTCTTTGCCTTCTCTCTTCACCTGCAGACCCCCGCACTCTTTTCTCTCTTTCCCTTCCAAATTCACCACCGCCCCCTTCCATCTTTCCTCTTCTCATTGTTCTTCGCTCTTTTCCTCCTCGAAGAAGAAGACACATCTCTTATCGCTAGTTGCCTCTGTGGCCCAGTCTTCGGAGTGGGGCCAAGAAGACGATACCATCACCATTGACCCAAAACTCAGCGGCGACGAGGATGGCGAAGAAGGCCCTCATTGGGAAAATCAAGAGCTCAGTGAGAATGAGTCTCGTATTTCTGATTGGGAAGGTGAAGGCGAAGGCGAAGATGATGGAGGAAGTGAGGGTGAAGGAGGAGGAGTTTTGGAGCTGGGAGACGAGGAAGAAGGCCCTTTGGAGGAGCCAAATGAAGACGCTAAATTGTATGTTGGGAATTTGTCATATGACGTCGATAGTCAAAAGCTTGCAATGCTGTTTGAGAAGGCTGGAACTGTCGAGATTGCTGAGGTGAGATTCCAGAGTTTGGTGAATTGAATGTTTTTTTGTTTATGAATTTAGGGTTTAAGCTCTTAATCTTCTGCTTGTGAGGACTGTAGGTTATTTACGACCGACAATCAGATCGGAGTCGTGGTTTCGGTTTTGTGACAATGAGTAGTGTTGAAGAAGCTGAGAAAGCTGTGGATACCTTCAACCGTTATGTAAGCTTTTGATCTTCAATTTCTTCATAAATCCAAACCTTATCTAACTTTCTCTTCTACACAGGATTCACCCATATTTGATTATCATGAAACCTCCTCTTCATTCCTACTTTTCAGTGGAAAATTCAGAAGAATTTATATGAACTGTTTTTCATGAATCTTAGAGTTAGGGTCTGTATGGGTCTAGATTGATTTGTTTGAGTGGCTCTGTCTCTTTCCTGGCTAAGGCTGATCTTGTTCTCGGGGTTTGCCATTGATTTGTTTTGAGGTTAATGTTCCTATAAAGGAAGGCCATGTCCTTGTGTAAACCTATTGTCTGGGCTGTTACTAGAGTATCTCAAACATATCAATTGGTTTCTTTTTTCCTTCGGTTGAGCTGCCCCTTGATTTTTGCTTGCTTCTTAAAATCTTAATTGATTGTGTGGGTTAATAGGAGTTCTTGGGGAGGACGTTGGTTGTTAATAAGGCTGCCGCCAGAGGTTCAAGGCCAGAACGCCAACCACGAACATTTCAACCAGCTTTCAGAATCTATGTTGGTAATCTTGCATGGGAAGTAGACAGTGCACGCCTGGAGCAGGTCTTCAGTGAACATGGTAAAGTAGTAGACGCTCGGGTTCTTTACGACCGGGACAGTGGCCGTTCTCGTGGATTTGGCTTCGTGACCATGGCCGACGAAACTGGAATGAATGATGCCATTGCTGCTCTGGATGGGCAGGTATGAAAATTGCAGTTTCTTTACAGCAATCATTTTAGAATCCGAACTTGATAACACCCAGTTACTTGAATCTTGTCAACTGCTAAGAAAACATTCTGGAATTTGAAATATGCAGAGTGTAGATGGAAGGGCAATCAGAGTGAATGTTGCAGAGGAAAAACCAAGGCGCAACTTCTGAACTGAACCATGATATGATGAAACCCAATGCCCTTTTTCTCTTGTTTGTTCTGTGTTTCGCTTTTCTTCATCTTTTCTTCCTAAAGTATAGGTGAGTTTTGTAGTGCCATTGTTTAGCCACCTTGTAAAAGTGCAATTTGATGTCCTTTATGCTTTCACAATTTCAAGTCTGTTATTATTCTGGATTGATGCGAGTTACTTGTTTCAAAAGTGTTGTACCTTTTTTTATCCTTCCACCCTGCTCTCGATACCTCATTCACTGAAGTTACCAAAATTTGATATTAGTCACTGAAGGAGACGAACA

mRNA sequence

ATGGCTTCTTCTTCAGCCACTTCAATTTTGAAGCCCTTATCCAAGGCAGATTCTTGCCTTCTCTCTTTGCCTTCTCTCTTCACCTGCAGACCCCCGCACTCTTTTCTCTCTTTCCCTTCCAAATTCACCACCGCCCCCTTCCATCTTTCCTCTTCTCATTGTTCTTCGCTCTTTTCCTCCTCGAAGAAGAAGACACATCTCTTATCGCTAGTTGCCTCTGTGGCCCAGTCTTCGGAGTGGGGCCAAGAAGACGATACCATCACCATTGACCCAAAACTCAGCGGCGACGAGGATGGCGAAGAAGGCCCTCATTGGGAAAATCAAGAGCTCAGTGAGAATGAGTCTCGTATTTCTGATTGGGAAGGTGAAGGCGAAGGCGAAGATGATGGAGGAAGTGAGGGTGAAGGAGGAGGAGTTTTGGAGCTGGGAGACGAGGAAGAAGGCCCTTTGGAGGAGCCAAATGAAGACGCTAAATTGTATGTTGGGAATTTGTCATATGACGTCGATAGTCAAAAGCTTGCAATGCTGTTTGAGAAGGCTGGAACTGTCGAGATTGCTGAGGTTATTTACGACCGACAATCAGATCGGAGTCGTGGTTTCGGTTTTGTGACAATGAGTAGTGTTGAAGAAGCTGAGAAAGCTGTGGATACCTTCAACCGTTATGAGTTCTTGGGGAGGACGTTGGTTGTTAATAAGGCTGCCGCCAGAGGTTCAAGGCCAGAACGCCAACCACGAACATTTCAACCAGCTTTCAGAATCTATGTTGGTAATCTTGCATGGGAAGTAGACAGTGCACGCCTGGAGCAGGTCTTCAGTGAACATGGTAAAGTAGTAGACGCTCGGGTTCTTTACGACCGGGACAGTGGCCGTTCTCGTGGATTTGGCTTCGTGACCATGGCCGACGAAACTGGAATGAATGATGCCATTGCTGCTCTGGATGGGCAGAGTGTAGATGGAAGGGCAATCAGAGTGAATGTTGCAGAGGAAAAACCAAGGCGCAACTTCTGAACTGAACCATGATATGATGAAACCCAATGCCCTTTTTCTCTTGTTTGTTCTGTGTTTCGCTTTTCTTCATCTTTTCTTCCTAAAGTATAGGTGAGTTTTGTAGTGCCATTGTTTAGCCACCTTGTAAAAGTGCAATTTGATGTCCTTTATGCTTTCACAATTTCAAGTCTGTTATTATTCTGGATTGATGCGAGTTACTTGTTTCAAAAGTGTTGTACCTTTTTTTATCCTTCCACCCTGCTCTCGATACCTCATTCACTGAAGTTACCAAAATTTGATATTAGTCACTGAAGGAGACGAACA

Coding sequence (CDS)

ATGGCTTCTTCTTCAGCCACTTCAATTTTGAAGCCCTTATCCAAGGCAGATTCTTGCCTTCTCTCTTTGCCTTCTCTCTTCACCTGCAGACCCCCGCACTCTTTTCTCTCTTTCCCTTCCAAATTCACCACCGCCCCCTTCCATCTTTCCTCTTCTCATTGTTCTTCGCTCTTTTCCTCCTCGAAGAAGAAGACACATCTCTTATCGCTAGTTGCCTCTGTGGCCCAGTCTTCGGAGTGGGGCCAAGAAGACGATACCATCACCATTGACCCAAAACTCAGCGGCGACGAGGATGGCGAAGAAGGCCCTCATTGGGAAAATCAAGAGCTCAGTGAGAATGAGTCTCGTATTTCTGATTGGGAAGGTGAAGGCGAAGGCGAAGATGATGGAGGAAGTGAGGGTGAAGGAGGAGGAGTTTTGGAGCTGGGAGACGAGGAAGAAGGCCCTTTGGAGGAGCCAAATGAAGACGCTAAATTGTATGTTGGGAATTTGTCATATGACGTCGATAGTCAAAAGCTTGCAATGCTGTTTGAGAAGGCTGGAACTGTCGAGATTGCTGAGGTTATTTACGACCGACAATCAGATCGGAGTCGTGGTTTCGGTTTTGTGACAATGAGTAGTGTTGAAGAAGCTGAGAAAGCTGTGGATACCTTCAACCGTTATGAGTTCTTGGGGAGGACGTTGGTTGTTAATAAGGCTGCCGCCAGAGGTTCAAGGCCAGAACGCCAACCACGAACATTTCAACCAGCTTTCAGAATCTATGTTGGTAATCTTGCATGGGAAGTAGACAGTGCACGCCTGGAGCAGGTCTTCAGTGAACATGGTAAAGTAGTAGACGCTCGGGTTCTTTACGACCGGGACAGTGGCCGTTCTCGTGGATTTGGCTTCGTGACCATGGCCGACGAAACTGGAATGAATGATGCCATTGCTGCTCTGGATGGGCAGAGTGTAGATGGAAGGGCAATCAGAGTGAATGTTGCAGAGGAAAAACCAAGGCGCAACTTCTGA

Protein sequence

MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSSSKKKTHLLSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDWEGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRPERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF

Homology

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BLAST of CmaCh10G000830 vs. ExPASy Swiss-Prot
Match: Q04836 (31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31A PE=1 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 7.2e-80
Identity = 186/339 (54.87%), Postives = 232/339 (68.44%), Query Frame = 0


Query: 1   MASSSATSILKPLSKAD---SCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSL 60
           MASS  TS LKPL+ AD   S + S PS+ +        S      T   +L  S  S +
Sbjct: 1   MASSIVTSSLKPLAMADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSF-SRV 60

Query: 61  FSSSKKKTHLLS--LVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENES 120
             S K KTHL     V+ VAQ+S+W +E           G E        EN   S++ S
Sbjct: 61  SLSLKTKTHLKKSPFVSFVAQTSDWAEE-----------GGEGSVAVEETENSLESQDVS 120

Query: 121 RISDWEGE-GEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLA 180
              + EG+  EG+   G E E G V E    E     EP+E+AKL+VGNL+YDV+SQ LA
Sbjct: 121 EGDESEGDASEGDVSEGDESE-GDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALA 180

Query: 181 MLFEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAA 240
           MLFE+AGTVEIAEVIY+R++D+SRGFGFVTMSSV+EAE AV+ FNRY+  GR L VNKAA
Sbjct: 181 MLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAA 240

Query: 241 ARGSRPERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGF 300
            RGSRPER PR ++PAFR+YVGNL W+VD+ RLEQ+FSEHGKVV+ARV+YDR++GRSRGF
Sbjct: 241 PRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGF 300

Query: 301 GFVTMADETGMNDAIAALDGQSVDGRAIRVNVAEEKPRR 334
           GFVTM+D   +N+AI+ALDGQ+++GRAIRVNVAEE+P R
Sbjct: 301 GFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 326

[Close]

BLAST of CmaCh10G000830 vs. ExPASy Swiss-Prot
Match: P19683 (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 3.7e-76
Identity = 180/337 (53.41%), Postives = 223/337 (66.17%), Query Frame = 0


Query: 3   SSSATSILKPLSKA-DSCLLSLPSLFTCRPPHSFLSFPSKFTTAP----FHLSSSHCSSL 62
           S +   I+KP S A +SCL+SLP LF         ++P    T       HLS ++ S  
Sbjct: 2   SCATKPIIKPSSMATNSCLISLPPLFATTTKSKSFAYPYLSNTLKPIKLLHLSCTY-SPC 61

Query: 63  FSSSKKKTHLLSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRI 122
             S KKKT + +L           +E++T+ +D +      G+E     N E S  E   
Sbjct: 62  ILSPKKKTSVSAL----------QEEENTLILDGQ------GQESGDLFNFEPSGEE--- 121

Query: 123 SDWEGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLF 182
           ++ EG  E   D G   E        DEEE   +EP EDAKL+VGNL YDVDS+ LA LF
Sbjct: 122 TEEEGFVEAVGDAGESDE-----VEADEEEEEFQEPPEDAKLFVGNLPYDVDSEGLARLF 181

Query: 183 EKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARG 242
           E+AG VEIAEVIY+R +D+SRGFGFVTMS+VEEAEKAV+ +NRY+  GR L VNKAA RG
Sbjct: 182 EQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRG 241

Query: 243 SRPERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFV 302
            RPER PRTF+ ++RIYVGN+ W +D ARLEQ+FSEHGKVV ARV+YDR++GRSRGFGFV
Sbjct: 242 ERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFV 301

Query: 303 TMADETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRN 335
           TMA E  M+DAIA LDGQS+DGR IRVNVAE++ RRN
Sbjct: 302 TMASEAEMSDAIANLDGQSLDGRTIRVNVAEDRSRRN 313

[Close]

BLAST of CmaCh10G000830 vs. ExPASy Swiss-Prot
Match: P19682 (28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.4e-75
Identity = 165/319 (51.72%), Postives = 214/319 (67.08%), Query Frame = 0


Query: 17  DSCLLSLPSLFTCRPPHSFLSFPSKFT-TAPFHLSSSHCSSLFSSSKKKTHLLSLVASVA 76
           + CL+SLP  FT     S  S+P   T   P  LSSS   +L S +K+ T   + V+ ++
Sbjct: 4   NGCLISLPPFFT--TTKSISSYPFLSTQLKPISLSSS-LPTLLSLNKRTTQFPTFVSVLS 63

Query: 77  QSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDWEGEGEGEDDGGSEGE 136
                 ++D+T+ +D +    E G + P +                              
Sbjct: 64  ------EDDNTLVLDDQ----EQGGDFPSF------------------------------ 123

Query: 137 GGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKAGTVEIAEVIYDRQSD 196
              V E G+ EE   +EP+EDAKL+VGNL YD+DS+ LA LF++AG VEIAEVIY+R++D
Sbjct: 124 ---VGEAGETEE--YQEPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETD 183

Query: 197 RSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRPERQPRTFQPAFRIYV 256
           RSRGFGFVTMS+VEEA+KAV+ +++Y+  GR L VNKAA RGSRPER PRTFQP +RIYV
Sbjct: 184 RSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVNKAAPRGSRPERAPRTFQPTYRIYV 243

Query: 257 GNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAIAALDGQ 316
           GN+ W++D ARLEQVFSEHGKVV ARV++DR+SGRSRGFGFVTM+ E  M++AIA LDGQ
Sbjct: 244 GNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQ 274

Query: 317 SVDGRAIRVNVAEEKPRRN 335
           ++DGR IRVN AEE+PRRN
Sbjct: 304 TLDGRTIRVNAAEERPRRN 274

[Close]

BLAST of CmaCh10G000830 vs. ExPASy Swiss-Prot
Match: Q9FGS0 (RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31B PE=1 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 8.5e-73
Identity = 148/220 (67.27%), Postives = 178/220 (80.91%), Query Frame = 0


Query: 115 SRISDWEGEGEGEDDGGSEGEGGGVLELGDEEEG-PLEEPNEDAKLYVGNLSYDVDSQKL 174
           S+ S+W  E EGE DG   G    V E  + E+G    EP E+AKL+VGNL YDVDSQ L
Sbjct: 71  SQTSNWAEEEEGE-DGSIGGTSVTVDESFESEDGVGFPEPPEEAKLFVGNLPYDVDSQAL 130

Query: 175 AMLFEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKA 234
           AMLFE+AGTVEI+EVIY+R +D+SRGFGFVTMS+VEEAEKAV+ FN +E  GR L VN+A
Sbjct: 131 AMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRA 190

Query: 235 AARGSRPERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRG 294
           A RGSRPERQPR +  AFRIYVGNL W+VDS RLE++FSEHGKVVDARV+ DR++GRSRG
Sbjct: 191 APRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRG 250

Query: 295 FGFVTMADETGMNDAIAALDGQSVDGRAIRVNVAEEKPRR 334
           FGFV M++E  +N AIAALDGQ+++GRAI+VNVAEE+ RR
Sbjct: 251 FGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEERTRR 289

[Close]

BLAST of CmaCh10G000830 vs. ExPASy Swiss-Prot
Match: P28644 (28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.5e-72
Identity = 155/263 (58.94%), Postives = 191/263 (72.62%), Query Frame = 0


Query: 74  VAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDWEGEGEGEDDGGSE 133
           VAQ+SEW QE  T  +   L G+ D E    W       +E+++S         D+GG E
Sbjct: 2   VAQTSEWEQEGSTNAV---LEGESDPEGAVSW------GSETQVS---------DEGGVE 61

Query: 134 GEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKAGTVEIAEVIYDRQ 193
           G  G              EP E+AKL+VGNL YDVDS+KLA +F+ AG VEIAEVIY+R+
Sbjct: 62  GGQG------------FSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRE 121

Query: 194 SDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRPERQPR-TFQPAFR 253
           +DRSRGFGFVTMS+VEEAEKAV+  N Y+  GR L VNKAA RGS PER PR  F+P+ R
Sbjct: 122 TDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGS-PERAPRGDFEPSCR 181

Query: 254 IYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAIAAL 313
           +YVGNL W+VD++RLEQ+FSEHGKVV ARV+ DR++GRSRGFGFVTM+ E+ +NDAIAAL
Sbjct: 182 VYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAAL 233

Query: 314 DGQSVDGRAIRVNVAEEKPRRNF 336
           DGQ++DGRA+RVNVAEE+PRR F
Sbjct: 242 DGQTLDGRAVRVNVAEERPRRAF 233

[Close]

BLAST of CmaCh10G000830 vs. ExPASy TrEMBL
Match: A0A6J1JFY1 (28 kDa ribonucleoprotein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111484771 PE=4 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 6.8e-182
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0


Query: 1   MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
           MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS
Sbjct: 1   MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60

Query: 61  SKKKTHLLSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120
           SKKKTHLLSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW
Sbjct: 61  SKKKTHLLSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120

Query: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA 180
           EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA
Sbjct: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA 180

Query: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240
           GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP
Sbjct: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240

Query: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
           ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA
Sbjct: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300

Query: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 336
           DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF
Sbjct: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335

[Close]

BLAST of CmaCh10G000830 vs. ExPASy TrEMBL
Match: A0A6J1E0P7 (28 kDa ribonucleoprotein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111429756 PE=4 SV=1)

HSP 1 Score: 641.7 bits (1654), Expect = 1.7e-180
Identity = 333/335 (99.40%), Postives = 333/335 (99.40%), Query Frame = 0


Query: 1   MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
           MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS
Sbjct: 1   MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60

Query: 61  SKKKTHLLSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120
           SKKKTHL SLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW
Sbjct: 61  SKKKTHLSSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120

Query: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA 180
           EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA
Sbjct: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA 180

Query: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240
           GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGR LVVNKAAARGSRP
Sbjct: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRPLVVNKAAARGSRP 240

Query: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
           ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA
Sbjct: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300

Query: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 336
           DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF
Sbjct: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335

[Close]

BLAST of CmaCh10G000830 vs. ExPASy TrEMBL
Match: A0A6J1C316 (28 kDa ribonucleoprotein, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111006981 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.3e-140
Identity = 275/341 (80.65%), Postives = 299/341 (87.68%), Query Frame = 0


Query: 1   MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
           MAS+SATSILKPLSKADSCLLSLPS+FTCRPPHSFLSFPSK     FHLSSS  SS FS 
Sbjct: 1   MASTSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIR--FHLSSSSHSSPFSL 60

Query: 61  SKKKTHLLSLVASVAQSSEWGQEDDTITIDPKLSGD--EDGEEGPHWENQELSENESRIS 120
           SKKK H  SLV+ VAQ+S+W QEDDTITIDPKL GD  E+ E+GPHWENQELSE ESRIS
Sbjct: 61  SKKKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRIS 120

Query: 121 DWEGEGEGEDDGGSEGEG----GGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLA 180
           DWEGE E   DGGSE EG    GG+LE  +EEEG  EEPNEDAKL+VGNL YDVDSQKLA
Sbjct: 121 DWEGEAE---DGGSEAEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLA 180

Query: 181 MLFEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAA 240
           M+F KAGTVEIAEVIY+R++D+SRGFGFVTMS+VEEAEKAVDTFNRYE  GR L VNKAA
Sbjct: 181 MIFGKAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAA 240

Query: 241 ARGSRPERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGF 300
            RG+RPER PRTFQ +FRIYVGNL W+VD+ARLEQVFSEHGKVV+ARVLYDRD+GRSRGF
Sbjct: 241 PRGARPERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGF 300

Query: 301 GFVTMADETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 336
           GFVTMADETGMNDAIAALDGQS+DGRAIRVNVAEE+PRRNF
Sbjct: 301 GFVTMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF 336

[Close]

BLAST of CmaCh10G000830 vs. ExPASy TrEMBL
Match: A0A5A7USX4 (Ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00900 PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.3e-137
Identity = 271/338 (80.18%), Postives = 293/338 (86.69%), Query Frame = 0


Query: 1   MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHC-SSLFS 60
           MAS+SATS+ K LSK DSC LSLPSLFT RPPH+FLSFPSKF   PFHLSSS   SS F 
Sbjct: 1   MASTSATSLFKTLSKPDSCFLSLPSLFTGRPPHTFLSFPSKF--IPFHLSSSSSHSSCFY 60

Query: 61  SSKKKTHLLSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEE--GPHWENQELSENESRI 120
            SKKK HL     SVAQ+S+W QEDDT+TIDPKL  DED EE  GPHWEN+ELSE ESRI
Sbjct: 61  PSKKKPHL----PSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRI 120

Query: 121 SDWEGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLF 180
           SDWEGEGEGE DGGSE E GG  E  + E+GP EEPNEDAKL+VGNL YD+DS+KLAMLF
Sbjct: 121 SDWEGEGEGE-DGGSEAEVGGDEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLF 180

Query: 181 EKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARG 240
           EKAGTVEIAEVIY+R++DRSRGFGFVTMS+VEEAEKAVDTFNRYE  GR L VNKAA RG
Sbjct: 181 EKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRG 240

Query: 241 SRPERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFV 300
           +R ERQPR FQPAFRIYVGNL W+VD+ARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFV
Sbjct: 241 TRQERQPRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFV 300

Query: 301 TMADETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 336
           TMADETGMNDAIAALDGQS++GRAIRVNVAEE+PRRNF
Sbjct: 301 TMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 331

[Close]

BLAST of CmaCh10G000830 vs. ExPASy TrEMBL
Match: A0A5D3BIH5 (28 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00930 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 8.7e-137
Identity = 271/339 (79.94%), Postives = 293/339 (86.43%), Query Frame = 0


Query: 1   MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHC-SSLFS 60
           MAS+SATS+ KPLSK DSC LSLPSLFT RPPH+FLSFPSKF   PFHLSSS   SS F 
Sbjct: 1   MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKF--IPFHLSSSSSHSSCFY 60

Query: 61  SSKKKTHLLSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEE--GPHWENQELSENESRI 120
            SKKK HL     SVAQ+S+W QEDDT+TIDPKL  DED EE  GPHWEN+ELSE ESRI
Sbjct: 61  PSKKKPHL----PSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRI 120

Query: 121 SDWEGEGEGEDDGGSEGEGGGVLELGDE-EEGPLEEPNEDAKLYVGNLSYDVDSQKLAML 180
           SDWEGEGE   DGGSE E GG  E  +E E+GP EEPNEDAKL+VGNL YD+DS+KLAML
Sbjct: 121 SDWEGEGE---DGGSEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAML 180

Query: 181 FEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAAR 240
           FEKAGTVEIAEVIY+R++DRSRGFGFVTMS+VEEAEKAVDTFNRYE  GR L VNKAA R
Sbjct: 181 FEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPR 240

Query: 241 GSRPERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGF 300
           G+R ERQPR FQPAFRIYVGNL W+VD+ARLEQVFSEHGKVVDARVLYDRDSGRSRGFGF
Sbjct: 241 GTRQERQPRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGF 300

Query: 301 VTMADETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 336
           VTMADETGMNDAIAALDGQS++GRAIRVNVAEE+PRRNF
Sbjct: 301 VTMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 330

[Close]

BLAST of CmaCh10G000830 vs. NCBI nr
Match: XP_022987125.1 (28 kDa ribonucleoprotein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 646.4 bits (1666), Expect = 1.4e-181
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0


Query: 1   MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
           MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS
Sbjct: 1   MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60

Query: 61  SKKKTHLLSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120
           SKKKTHLLSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW
Sbjct: 61  SKKKTHLLSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120

Query: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA 180
           EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA
Sbjct: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA 180

Query: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240
           GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP
Sbjct: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240

Query: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
           ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA
Sbjct: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300

Query: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 336
           DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF
Sbjct: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335

[Close]

BLAST of CmaCh10G000830 vs. NCBI nr
Match: XP_023515898.1 (28 kDa ribonucleoprotein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 642.5 bits (1656), Expect = 2.0e-180
Identity = 333/335 (99.40%), Postives = 333/335 (99.40%), Query Frame = 0


Query: 1   MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
           MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS
Sbjct: 1   MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60

Query: 61  SKKKTHLLSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120
           SKKKTHL SLVASVAQSSEWGQEDDTITIDPKL GDEDGEEGPHWENQELSENESRISDW
Sbjct: 61  SKKKTHLSSLVASVAQSSEWGQEDDTITIDPKLGGDEDGEEGPHWENQELSENESRISDW 120

Query: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA 180
           EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA
Sbjct: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA 180

Query: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240
           GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP
Sbjct: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240

Query: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
           ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA
Sbjct: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300

Query: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 336
           DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF
Sbjct: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335

[Close]

BLAST of CmaCh10G000830 vs. NCBI nr
Match: XP_022921514.1 (28 kDa ribonucleoprotein, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 641.7 bits (1654), Expect = 3.4e-180
Identity = 333/335 (99.40%), Postives = 333/335 (99.40%), Query Frame = 0


Query: 1   MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
           MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS
Sbjct: 1   MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60

Query: 61  SKKKTHLLSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120
           SKKKTHL SLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW
Sbjct: 61  SKKKTHLSSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120

Query: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA 180
           EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA
Sbjct: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA 180

Query: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240
           GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGR LVVNKAAARGSRP
Sbjct: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRPLVVNKAAARGSRP 240

Query: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
           ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA
Sbjct: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300

Query: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 336
           DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF
Sbjct: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335

[Close]

BLAST of CmaCh10G000830 vs. NCBI nr
Match: KAG7023089.1 (31 kDa ribonucleoprotein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 639.4 bits (1648), Expect = 1.7e-179
Identity = 332/335 (99.10%), Postives = 332/335 (99.10%), Query Frame = 0


Query: 1   MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
           MASSSATSILKPLSKADSCLLSLPSLF CRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS
Sbjct: 1   MASSSATSILKPLSKADSCLLSLPSLFPCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60

Query: 61  SKKKTHLLSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120
           SKKKTHL SLVA VAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW
Sbjct: 61  SKKKTHLSSLVAYVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120

Query: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA 180
           EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA
Sbjct: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA 180

Query: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240
           GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP
Sbjct: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240

Query: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
           ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA
Sbjct: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300

Query: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 336
           DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF
Sbjct: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335

[Close]

BLAST of CmaCh10G000830 vs. NCBI nr
Match: KAG6589409.1 (31 kDa ribonucleoprotein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 635.6 bits (1638), Expect = 2.5e-178
Identity = 330/335 (98.51%), Postives = 330/335 (98.51%), Query Frame = 0


Query: 1   MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60
           MASSSATSILKPLSKADSCLLSLPSLF CRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS
Sbjct: 1   MASSSATSILKPLSKADSCLLSLPSLFPCRPPHSFLSFPSKFTTAPFHLSSSHCSSLFSS 60

Query: 61  SKKKTHLLSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120
           SKKK HL SLVA VAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW
Sbjct: 61  SKKKPHLSSLVAYVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENESRISDW 120

Query: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLFEKA 180
           EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYD DSQKLAMLFEKA
Sbjct: 121 EGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDADSQKLAMLFEKA 180

Query: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240
           GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP
Sbjct: 181 GTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARGSRP 240

Query: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300
           ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA
Sbjct: 241 ERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMA 300

Query: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 336
           DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF
Sbjct: 301 DETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335

[Close]

BLAST of CmaCh10G000830 vs. TAIR 10
Match: AT4G24770.1 (31-kDa RNA binding protein )

HSP 1 Score: 298.9 bits (764), Expect = 5.1e-81
Identity = 186/339 (54.87%), Postives = 232/339 (68.44%), Query Frame = 0


Query: 1   MASSSATSILKPLSKAD---SCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHCSSL 60
           MASS  TS LKPL+ AD   S + S PS+ +        S      T   +L  S  S +
Sbjct: 1   MASSIVTSSLKPLAMADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSF-SRV 60

Query: 61  FSSSKKKTHLLS--LVASVAQSSEWGQEDDTITIDPKLSGDEDGEEGPHWENQELSENES 120
             S K KTHL     V+ VAQ+S+W +E           G E        EN   S++ S
Sbjct: 61  SLSLKTKTHLKKSPFVSFVAQTSDWAEE-----------GGEGSVAVEETENSLESQDVS 120

Query: 121 RISDWEGE-GEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLA 180
              + EG+  EG+   G E E G V E    E     EP+E+AKL+VGNL+YDV+SQ LA
Sbjct: 121 EGDESEGDASEGDVSEGDESE-GDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALA 180

Query: 181 MLFEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAA 240
           MLFE+AGTVEIAEVIY+R++D+SRGFGFVTMSSV+EAE AV+ FNRY+  GR L VNKAA
Sbjct: 181 MLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAA 240

Query: 241 ARGSRPERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGF 300
            RGSRPER PR ++PAFR+YVGNL W+VD+ RLEQ+FSEHGKVV+ARV+YDR++GRSRGF
Sbjct: 241 PRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGF 300

Query: 301 GFVTMADETGMNDAIAALDGQSVDGRAIRVNVAEEKPRR 334
           GFVTM+D   +N+AI+ALDGQ+++GRAIRVNVAEE+P R
Sbjct: 301 GFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 326

[Close]

BLAST of CmaCh10G000830 vs. TAIR 10
Match: AT5G50250.1 (chloroplast RNA-binding protein 31B )

HSP 1 Score: 275.4 bits (703), Expect = 6.0e-74
Identity = 148/220 (67.27%), Postives = 178/220 (80.91%), Query Frame = 0


Query: 115 SRISDWEGEGEGEDDGGSEGEGGGVLELGDEEEG-PLEEPNEDAKLYVGNLSYDVDSQKL 174
           S+ S+W  E EGE DG   G    V E  + E+G    EP E+AKL+VGNL YDVDSQ L
Sbjct: 71  SQTSNWAEEEEGE-DGSIGGTSVTVDESFESEDGVGFPEPPEEAKLFVGNLPYDVDSQAL 130

Query: 175 AMLFEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKA 234
           AMLFE+AGTVEI+EVIY+R +D+SRGFGFVTMS+VEEAEKAV+ FN +E  GR L VN+A
Sbjct: 131 AMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRA 190

Query: 235 AARGSRPERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRG 294
           A RGSRPERQPR +  AFRIYVGNL W+VDS RLE++FSEHGKVVDARV+ DR++GRSRG
Sbjct: 191 APRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRG 250

Query: 295 FGFVTMADETGMNDAIAALDGQSVDGRAIRVNVAEEKPRR 334
           FGFV M++E  +N AIAALDGQ+++GRAI+VNVAEE+ RR
Sbjct: 251 FGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEERTRR 289

[Close]

BLAST of CmaCh10G000830 vs. TAIR 10
Match: AT2G37220.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 186.4 bits (472), Expect = 3.7e-47
Identity = 102/197 (51.78%), Postives = 124/197 (62.94%), Query Frame = 0


Query: 156 DAKLYVGNLSYDVDSQKLAMLFEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAV 215
           D KL+VGNL ++VDS +LA LFE AG VE+ EVIYD+ + RSRGFGFVTMSSV E E A 
Sbjct: 90  DLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAA 149

Query: 216 DTFNRYEFLGRTLVVNKAAARGSRPERQPRTFQPAF-------------------RIYVG 275
             FN YE  GR L VN       R +   R  + +F                   R+YVG
Sbjct: 150 QQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVG 209

Query: 276 NLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAIAALDGQS 334
           NL+W VD   LE +FSE GKVV+ARV+YDRDSGRS+GFGFVT      + +AI +LDG  
Sbjct: 210 NLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGAD 269

[Close]

BLAST of CmaCh10G000830 vs. TAIR 10
Match: AT3G53460.1 (chloroplast RNA-binding protein 29 )

HSP 1 Score: 162.5 bits (410), Expect = 5.7e-40
Identity = 112/282 (39.72%), Postives = 143/282 (50.71%), Query Frame = 0


Query: 118 SDWEGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEP--NEDAKLYVGNLSYDVDSQKLAM 177
           SD+E E   EDD  ++G          ++  P+E    + D KL+VGNLS++VDS +LA 
Sbjct: 71  SDFEVE---EDDMFADG----------DDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQ 130

Query: 178 LFEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAA 237
           LFE AG VE+ EVIYD+ + RSRGFGFVTMS+  E E A   FN YEF GR L VN    
Sbjct: 131 LFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPP 190

Query: 238 RGSRPE---RQPRT---------------------------------------------- 297
              R E   R PR+                                              
Sbjct: 191 PPKREESFSRGPRSGGYGSERGGGYGSERGGGYGSERGGGYGSERGGGYGSQRSGGGYGG 250

Query: 298 ---------------FQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRS 334
                               R+YVGNL+W VD   LE +F+E GKVV+ARV+YDRDSGRS
Sbjct: 251 SQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRS 310

[Close]

BLAST of CmaCh10G000830 vs. TAIR 10
Match: AT3G53460.2 (chloroplast RNA-binding protein 29 )

HSP 1 Score: 162.5 bits (410), Expect = 5.7e-40
Identity = 112/282 (39.72%), Postives = 143/282 (50.71%), Query Frame = 0


Query: 118 SDWEGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEP--NEDAKLYVGNLSYDVDSQKLAM 177
           SD+E E   EDD  ++G          ++  P+E    + D KL+VGNLS++VDS +LA 
Sbjct: 71  SDFEVE---EDDMFADG----------DDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQ 130

Query: 178 LFEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAA 237
           LFE AG VE+ EVIYD+ + RSRGFGFVTMS+  E E A   FN YEF GR L VN    
Sbjct: 131 LFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPP 190

Query: 238 RGSRPE---RQPRT---------------------------------------------- 297
              R E   R PR+                                              
Sbjct: 191 PPKREESFSRGPRSGGYGSERGGGYGSERGGGYGSERGGGYGSERGGGYGSQRSGGGYGG 250

Query: 298 ---------------FQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRS 334
                               R+YVGNL+W VD   LE +F+E GKVV+ARV+YDRDSGRS
Sbjct: 251 SQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRS 310

The following BLAST results are available for this feature:

BLAST of CmaCh10G000830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q04836	7.2e-80	54.87	31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31A...	[more]
P19683	3.7e-76	53.41	31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=...	[more]
P19682	2.4e-75	51.72	28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=...	[more]
Q9FGS0	8.5e-73	67.27	RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31...	[more]
P28644	1.5e-72	58.94	28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1	[more]

BLAST of CmaCh10G000830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JFY1	6.8e-182	100.00	28 kDa ribonucleoprotein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1E0P7	1.7e-180	99.40	28 kDa ribonucleoprotein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1C316	1.3e-140	80.65	28 kDa ribonucleoprotein, chloroplastic-like OS=Momordica charantia OX=3673 GN=L...	[more]
A0A5A7USX4	1.3e-137	80.18	Ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00...	[more]
A0A5D3BIH5	8.7e-137	79.94	28 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of CmaCh10G000830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022987125.1	1.4e-181	100.00	28 kDa ribonucleoprotein, chloroplastic-like [Cucurbita maxima]	[more]
XP_023515898.1	2.0e-180	99.40	28 kDa ribonucleoprotein, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022921514.1	3.4e-180	99.40	28 kDa ribonucleoprotein, chloroplastic-like [Cucurbita moschata]	[more]
KAG7023089.1	1.7e-179	99.10	31 kDa ribonucleoprotein, chloroplastic, partial [Cucurbita argyrosperma subsp. ...	[more]
KAG6589409.1	2.5e-178	98.51	31 kDa ribonucleoprotein, chloroplastic, partial [Cucurbita argyrosperma subsp. ...	[more]

BLAST of CmaCh10G000830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24770.1	5.1e-81	54.87	31-kDa RNA binding protein	[more]
AT5G50250.1	6.0e-74	67.27	chloroplast RNA-binding protein 31B	[more]
AT2G37220.1	3.7e-47	51.78	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G53460.1	5.7e-40	39.72	chloroplast RNA-binding protein 29	[more]
AT3G53460.2	5.7e-40	39.72	chloroplast RNA-binding protein 29	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 158..231 e-value: 2.2E-25 score: 100.3 coord: 252..325 e-value: 2.8E-27 score: 106.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 253..323 e-value: 2.2E-19 score: 69.0 coord: 159..228 e-value: 1.6E-19 score: 69.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 251..329 score: 19.399549
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 157..235 score: 17.983952
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 90..246 e-value: 6.0E-27 score: 96.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 247..335 e-value: 2.0E-26 score: 94.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..156
None	No IPR available	PANTHER	PTHR48025	OS02G0815200 PROTEIN	coord: 1..334
None	No IPR available	PANTHER	PTHR48025:SF8	RIBONUCLEOPROTEIN	coord: 1..334
None	No IPR available	CDD	cd12399	RRM_HP0827_like	coord: 252..328 e-value: 1.23004E-32 score: 114.633
None	No IPR available	CDD	cd12399	RRM_HP0827_like	coord: 158..233 e-value: 3.20491E-34 score: 118.485
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 245..333
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 153..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G000830.1	CmaCh10G000830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901259	chloroplast rRNA processing
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding