CmaCh10G000670 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh10G000670
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr10: 255143 .. 260499 (+)
RNA-Seq Expression	CmaCh10G000670
Synteny	CmaCh10G000670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGCGCTTGGAATGTACGCACTCCCGTGACTCATTGTTCTGCTTTTCTACTCTGCGAGGGTTTCTCGCCATGGAATCTTCCGCTTCGTCGTTGCTCATGGCGCTTCTAAGTTTCTCGGCGATCTTCCTTCTTGTGGCTTACCGTTCCTCCTTCAAATCCGGTACTGCTTTTTCTCGAAACGCACTTTGATTTGAAATTTGCTCTTTTGTGTTCTGTTCTGTTCCGAATTTAGATAAGGAAAAATTCAGTACGCATAGTTTAATCGATCATTTTGACCTGAAGCCTCGGAAATTAGACAATTTCATGTTTTGTAATAATGCATTTGAGTCTCAGTGTTAGAATTGGTCAATCCATTAGAATAGCTTGAAGTTAGTCATGCCATAAGAATAGGCTTACTTCGTTAGTTTCCTATGAAATCGGATCTATTAGTTAATCTTTTGCCAATATAAATAGAATATGTCCTCAATAGTGTGAGGCACAGTTTTGCATAAACTTGATATGGTATCAGAGCAGAAATAAGATCCACGAGATCCATAGCCTCTGCTGTTAAACATGTCAATCCCAACAAACACAATGTCTTCTCCGTCGATCAGTCAGGTGATTAGTGTTAAGCTTACACAAGAAAATTATCTACTGTGGTCTACCCAAATCCTTCCCTACTTGCGTAGCCAAAACCTTGTTGGTTTTGTGGATGGATCCATGCCTGCACCAAGCCAGACGATCGCCGTTGAACCAAGTGAAGAAACAGGGAATCGCAAAATTATCATCAACCCTGAGTTCACAGTCTGGTACCCCCAGGACCAGCTGGTACTCAGCCTCATCAACTCATCAGTCACTGAGGAGGTTCTCAGCACGATGGTTGGAATCACCACTGCACGAGAAGCCTGGATTACGCTGGAGCGACAATTTGCTTCCACATCTCGAGCAAGAGCAATGCAGATCCGTATGGAACTCTCTACTATCCAGAAAAAGGACATGACAATTGCTGACTACTTTCGTAAAGTAAAACATCTTGGTGATACACTTGCTGCCATTGGCAAGCGAATAGAGGATGAAGAACTCATCGCCTACATGCTGCAAGGACTTGGTCCAGATTATGATCCTCTAGTCACAAGCATTACAACCAGAACAGATGTATACACTGTCAGCGACGTGTATGCTCACATGCTGAGCTATGAGATGCGGCACTTGCGTAAGGGTACATTTGAGCAACTTTCATCTGCTAACAATGTCAATAGGATATCCATTCGTGGAGGTGCCAATGGAGGTCGAGGTAGTCGCGGTCGTAGTCGTCAGTTAAATAGTGGTCATGGACAATCAAGGCGTACTGTGAACAATCCTGGACGTCAACCATCAAAGACACAAAGCAGCTCAGGCATTGTCTGTCAGATTTGTGGTAAGCCCAATCACGATGCTTTGCAATGCTGGCACAGATTTGATCAGGCATATCAAGCCGAAAATAATCTCAAACAAGCAGCTTTGGCAACTAGTGGATACACTAGTGACACAAACTGGTATGTTGACACTGGAGCCACAGATCATATCACCAATGACCTAGAGAGGCTTACCACCAGAGAACGCTACACTGGCACCGACCAAATTCAGGTTGCAAATGGCGCAGGTTTGTCTATCTCTCATATTGGGAATTCATTAATTTCTGGTTCATCTCTTGTTCTGAAACATATCCTATATGCTCCTAAAATCAATAAGCACCTAATTTCAGTACAAAGACTAGCATCTGATAATAATGCTGTTGTAGAATTTCACCCAAACTATTTTTTGGTTAAGGACCGAGTCACGAAGAAACTCCTGCTCCACGGTAGATGTAAGAATGGCCTATACGTTCTACCGCATAATTTCAGTCAAGCCTTGCTGACAGCCAAACTTTCGAAAGAACAATGGCACAGAAGGCTAGGGCACCCTGCATCTCCAATTACCATTAGAATTCTACAAGATAATAATTTAGCTATAGATACTAATATTCCCTCTTCCTCAATTTGTAATGCTTGTCAATTAGGGAAAGCACATCAATTGCCATTTGGTTCTTCTCAGCATGTATCTACAGCACCCCTTCAATTAATTCACACTGATGTATGGGGTCCATCCATTGCGTCAGTAAATAATTCCAAATATTATGTTTCCTTTGTTGATGATTTTAGTCGTTATGTTTGGATTTACTTTCTGAGATGCAAATCTGATGTTGAGTCTGTGTTCCTTCAATTTCAAAAACATGTTGAAACTATGCTAAATACCAAAATTCGCTCCGTCCAATCAGATTGGGGGGGTGAATACCATCGGTTACACAATTATTTCAAATCCACAGGCATTGAACATCATATCTCCTGTCCTCACACACACCAGCAGAATGGGTTAGTCGAAAGAAAACACAGACACATTGTAGAAACTGGCCTTGCTTTACTCGCTCAAGCCAACATGCCTCTATCCTACTGGGATGAAGCTTTCAACACAGCTTGCTTTCTTATAAATAGAATGCCCAGCCGAACCATACAACAAGACACACCACTTCATAAATTGTTTGGTAAAAGTCCAGACTACTCCATGCTTAGGGTGTTTGGCTGTGCTTGCTGGCCTAATTTAAGGCCTTACAACAACAAGAAACTGAGTTTCAGAACTACTAGATGTATATTCTTGGGTTATAGTTCTTCTCATAAGGGATATAAATGCTTAAATAGAAGTACAGGACGTATTTACATCTCTAGAGACGTGGTTTTCGATGAAAATATTTTTCCTTTTGAAGAATCTAAGCCACCAAACAAAACCACAAATCCACATCATCCTGTTCTACTTCCAGCCTTAGCCAAACTTGCTAGTTTTTACACTGAAAATGCTCTTACAGATATTGAACCAGTTGTTAGTAATTCCCATATGAATGATGGTCAAACTGATAATATTGCTAGTGACAACTTGTCTGGTGTCAGCTTATCTTCTGCAGATAATACAAGAAGTTCAGAGGAAATTGCAGAATATGAAGCTGAGAGCAGTTCGATCAATGCTCAAAACCAAACTCATGAACATGTGTCTGATCAACCAACTGAAGCAGCTAGTCAACATCCAATGCGAACAAGGTTGAGAAATAACATTGTACAAGCTAAACAATTCACTGATGGAACTATCAGATATTCAGAAACCTCAAGAAAATTCGCAAGCGCTGTAACTATCACAACTCCGATCATAGAGACTGCTACTGAACCTCGAAACCTGCAGGAAGCCATGCAACATCCAAGATGGAGAGGAGCAATGAATGATGAGCTCTCAGCGGTAAAACAAAATGCCACTTGGGATCTAGTTCCACCCAAACCTGGAATAAATCTCATTGATAGTAAATGGGTGTATAAAGTGAAAAGAAAAGCAGATGGGTCAGTTGAAAGATTAAAAGCAAGATTAGTTGCCAAAGGATTCAAGCAAAGATTTGGTGTTGATTACACTGATACTTTTAGCCCTGTGATCAAACCGTCAACAATCAGGGTCATTCTTTCGCTAGCAGTAACCAAGGGCTGGAATATGAGACAAGTTGATATCCAAAATGCATTTTTGCATGGAATTCTGAAAGAGGAAGTGTACATGCGACAACCACCAGGATTTCAAGACTCAGCCAAACCAAAGAATTACATATGCAAGCTCAAGAAAGCCCTTTATGGCCTGAAACAAGCCCCAAAAGCTTGGCATTCAAGGTTGACTGGAAAACTTATTGAGTTAGGCTTCAAGGCTTCAGTAGCTGATTCATCTCTTTTTATTCTCAAAAACAGAGAGATAACTATCTATATGCTCATCTATGTTGATGATATAATTATTGTGAGCTCCTCTGATCAAGCAACCGAAAGGTTGATTCAGAAATTGAAAATAGATTTTGCAGTAAAAGATTTGGGTGATCTTGAGTATTTTCTGGGTATTGAAGTCAAGAAAACACGAGATGGTATCATACTGTCACAGAGACGATATGCTTTAGATTTGTTGAAAAGAGTAAACATGGAAAAATGCAAACCTATGTCTACACCAATGGGTTCTGCTGAAAAATTATTCAGAGAACAAGGAATACCCTTATCAGCTGAAGAACAATTCAAATACAGAAGTACAGTGGGAGCACTACAATATTTGACAATGACTAGGCCTGATTTGGCATTTGCTGTCAATAAAGTGTGTCAATATCTTCATACACCTACTGATGCTCATTGGGGTGCTGTGAAGAGAATTCTTCGTTATGTTAAAGGCACACTAGCATTAGGAGTGAAAATTCAGAAATCAACCATGATGTTGTCGGGGTTTTCTGATGCTGATTGGGCTGGTTGTCCCGATGATCGACGTTCAACTAGCGGCTTTGCTGTATTTCTTGGAGCAAATCTAATCTCATGGAGTTCCAGAAAACAGGCTACAGTGTCAAGATCAAGCACCGAAGCAGAATACAAGGCCATTGCGAATCTTACTGCAGAAATGATTTGGATCAAGTCATTACTGAAGGAACTGGGCGTGTATCAATCAAAGGCTCCTCGCCTCTGGTGTGACAACCTCGGAGCTACATATTTAACTTCAAATCCAGTATTTCATGCTAGAACGAAACATATTGAAGTTGATTTTCATTTTGTTCGAGAACAAGTAGCACGTAAAGCAATGGAAGTTCGGTTCATTTCATCAAGTGATCAAGTAGCTGATATCCTGACAAAACCACTGTCTAAAACTCCTTTTACTACACATTGTAACAATCTCAACATGTACAAGACTTGTTGGGATTGAAGGGGACTGTTAGAATTGGTCAATCCATTAGAATAGCTTGAAGTTAGTCATGCCATAAGAATAGGCTTACTTCGTTAGTTTCCTATGAAATCGGATCTATTAGTTAATCTTTTGCCAATATAAATAGAATATGTCCTCAATAGTGTGAGGCACAGTTTTGCATAAACTTGATACTCAGATGGCATTTAAGAGGAGTTGAATCTGTCTACGTTATTGAATTATAAAATAATGCTTTAAGCTTCTCTCCTGCTTTTAAGGGATGTTGCCGAGATGCCTACTGTCATTTTGCAGGCTTCCATAATATTAGCCATCAAGGACCAGATGTTTACAGGTAGAAGAACTTAAATAAGTTGTGATGTTTTCATATCCTATGTTTTGTAATAATGCATTTGGGTGACCTGAGTGTTTAGCGATCAATGACTGGTGAAATAATTTCAGATAGCAAAGCATAGAGGATGTCTTTCATCAACTTCTTTTTTTCTTTTCATGAGCTTGTGGTTTCATTAGAATTGTGTCCCAAATCTGATGGCTATGGTGGCTATCATGCATCCATCCAGGAGCATAAAACAGTGAAACACCAAGTAAGGATCTACATATTTCGACTGTAG

mRNA sequence

CTGCGCTTGGAATGTACGCACTCCCGTGACTCATTGTTCTGCTTTTCTACTCTGCGAGGGTTTCTCGCCATGGAATCTTCCGCTTCGTCGTTGCTCATGGCGCTTCTAAGTTTCTCGGCGATCTTCCTTCTTGTGGCTTACCGTTCCTCCTTCAAATCCGCTTCTCTCCTGCTTTTAAGGGATGTTGCCGAGATGCCTACTGTCATTTTGCAGGCTTCCATAATATTAGCCATCAAGGACCAGATGTTTACAGAATTGTGTCCCAAATCTGATGGCTATGGTGGCTATCATGCATCCATCCAGGAGCATAAAACAGTGAAACACCAAGTAAGGATCTACATATTTCGACTGTAG

Coding sequence (CDS)

ATGGAATCTTCCGCTTCGTCGTTGCTCATGGCGCTTCTAAGTTTCTCGGCGATCTTCCTTCTTGTGGCTTACCGTTCCTCCTTCAAATCCGCTTCTCTCCTGCTTTTAAGGGATGTTGCCGAGATGCCTACTGTCATTTTGCAGGCTTCCATAATATTAGCCATCAAGGACCAGATGTTTACAGAATTGTGTCCCAAATCTGATGGCTATGGTGGCTATCATGCATCCATCCAGGAGCATAAAACAGTGAAACACCAAGTAAGGATCTACATATTTCGACTGTAG

Protein sequence

MESSASSLLMALLSFSAIFLLVAYRSSFKSASLLLLRDVAEMPTVILQASIILAIKDQMFTELCPKSDGYGGYHASIQEHKTVKHQVRIYIFRL

Homology

[Close]

BLAST of CmaCh10G000670 vs. NCBI nr
Match: KAG6589391.1 (Cytochrome P450 94B3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 94.4 bits (233), Expect = 5.7e-16
Identity = 57/85 (67.06%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 1  MESSASSLLMALLSFSAIFLLVAYRSSFKSASLLLLRDVAEMPTVILQASIILAIKDQMF 60
          MES ASSL      F      +    S     LL +RDV EMPTVILQASIILAIKDQMF
Sbjct: 1  MESPASSLAHGASKF------LGDLPSSGLPFLLQIRDVGEMPTVILQASIILAIKDQMF 60

Query: 61 TELCPKSDGYGGYHASIQEHKTVKH 86
          TELC KSDGYGGYHASIQE+KTVKH
Sbjct: 61 TELCSKSDGYGGYHASIQENKTVKH 79

The following BLAST results are available for this feature:

BLAST of CmaCh10G000670 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh10G000670 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh10G000670 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589391.1	5.7e-16	67.06	Cytochrome P450 94B3, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmaCh10G000670 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G000670.1	CmaCh10G000670.1	mRNA