CmaCh09G013070 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh09G013070
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	TVP38/TMEM64 family membrane protein
Location	Cma_Chr09: 9123428 .. 9131171 (+)
RNA-Seq Expression	CmaCh09G013070
Synteny	CmaCh09G013070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCGCCCTTCTGACCTTAATACCGTCATCATCAAACCCCCCACCGCCATGTCTTTCTTCCCTCCATTTCTCTCCCCCTCTTTCCTCCTCTTTCCTTTTCAGCTTCAGACCTAACAAACGCTTCCATTTCCTCAAGCCTTGTTCCTCTCTCAAGCAATCCAAGAAACCTACTCTTCAGAAATCACCCACTACTGCCCCTCAGAGCTTCAAGTGGCTCTTTAGCCCCAAATCCGACGAGGATGACGACGGCGACGCCGATGAAGGGAGTAAGGCCGCGGAGGGAGATCAGGCGGCTTTGGAAGATGACACTGCGGTTAAGGGTACTCTTTTGGCCGGTGTGTTGCTTGTTGGGGTTATCGGTGGATTTGCGTTTGCTGGATATGTTTACAGGGACCCGATTAATGCGTTCTTGAATCAGTTCTCGACGTTTATTGATGGTAATTCTGTCTCTTTTTTTTTGTTTGAAGTTTTGGATTGGGGAAGGTTATGAATGGCTGATTTCTACAATGATATGATATTATCCACTTTGAGTACTCATGGCTTCATGGCTTGACTTTTCTTTGGGTTTCCCTACCGATGTGGGACTCTCTCCTAACAATACACTATAGAGCCTCTCCTATTGGAGCTCTGGAACAACCCCCATTAATTGTGGCTCAACTTCTTCTTTGGTGTCCTTGAATAAAGTACACCTTTGTTCAACACTTGAGTCACTTTTAACTACACCTTCGAGGCTCACAACTTCTTTGTTCAACTTTTGAGGATTTTATTGACATGGCTAAGTTAAGGGCATGAGTCTCTTACCATGTTAAAAATTATGGATCTCTACGATGGTTTTATATTGCCCACTTTGAGCATAAGCTCTCATGGCTTTGCAATGGGCTTTTCCAAAATGCCTCATACTAATGGAGATGTATTCCTTACTTATAAACCCATGATATTCCCTAAATTAAGAATTGTTGTCCAGAAATTCTGTGTGTATGTGCGTTACATGAACAAGTGGCTTTGTGATTCATTTCTTACATAAACAAATGGTTTTGTGATTCGTTTCTTACATAAACGAGTGGTTTTGTGATTTGTTTTCTTTCTTGCATAATGGACATCAATTTGGAGAAAGAGTGATGTAAGACATTCTTTTTTGAAGATTTTTACCGTGCTAATGGCTTTCTGCGCTATTTCCCAAAAGAACTTTACCTTTTTAGGCTAATGTCCTTTCCATGTCTTTGCTAGTGTGAGATTTATTGCTTTTACTTTTTCTCCCATGTCGATCGTAAAGGATTTTGTGGTTCGATTAGCATTTTGGAGGTGTGTTGTTTATTGCTGATTGTTCTTCATTAATTTCGTCCTCTTTTTATTCTTCTTTTTCTCTTTAGATTCTGATGCAAATATAACTTCATCTTCTGTCGGAATGTGAGTTTTATTGGTCACCCTTTAGAAAATTGCTTGATAGGTTATAGTTGAGCTGTCTACCATTATTTTAAAATGGTAAACAGCTGAAAGACTCGAAACACTTATAGTTTCTAGAGTTATATCCGACTTTTCTCTCACTTCAATGGTTATTCTTCTTTTTTGTATGTACCTTCAAACCTTCTGTTTTAGTGAATTTTGCATAAAAAAATCTTTATCTTTTTCATTAATTTGTAAAACTATTTAATCAGAACTTATAACTTTTGTTTGCCTAGCAGATGTTTGCATAGTTAAAGATTTGAAGGCACAAACGTCAAATTTTGAAATAAGTTTGATTTGTTTTTTTTTTCTTTTTTCGGTAAAGATTAATGAAATATCAATGATAATGACTAAAATTGTGAGATCCCACATCGGTTAGGGAGGAGAATGGAACACCCTTTATAAGGGTGTGGAAACCTCTCCGTAACAGACATGTTTTAAAAGCCTTGAGGGGAAGTCTGAAAGGGAAAGCCCAAAGAGGACAATATTTGCTAGCGGTGGGCTTGAGTTGTTACAAATGGTATTAAAGCCAGTCACTGGGCGATGTGCCAGTGAAGAGGCTGAGCCCCGAAGGGGGGCAGACACGAGGTGGTGTGCCCGCAAGGACGCTGGGCCCTGAAAAGGGGTGGATTGAGGGGTCCCACTCGATTGGAGAAGGAAACGAGTGTCAGCGAGGACGTTGGGCCCCGAAGGTGGGTGGATTGAGGGGTCCCATATCGATTGGAGAAGGAAACGAGTGCCAGCGAAGACGTTGGGCCCCGAAGGGGGGTGAATTGTGAGTTCCCACATTGGTTGAGGAAGAGAACGAAACACCCTTTATAAAGGTGTGGAAACCTCTCCCTAGCAGACACATTTTTAAAAACCTTGAGGGGAAGCCTGAAAGGGAAATCCTAAAAAGGATAATATCTGCTAGTGGTGATCTTGGCCCGTCAAAATAGTTTTTTTTTTTAATGCAAATCTTAGGAGTTATAACAAATCATTTGATGCTATGATATTTGGATGTAGAAGCTGATGCTATTGATATCTCTACCCTTTAGTTTCTGACAATGCAGATACTTCTTTTTCTTTGTGTTTTTTAACATAGAATCATTACCAAACAAAAAAAAGATATACTGAAAAGCTGAGGAGCTCTCGATTTCTCTGAAGCTTCTCTCTCAATCATGCAATTCATAACATAGAGCTTTTGATGAACAGGATATGGTCCAGCAGGATATGCTTTATTTGTAGCAGTGTATGCAGGATTGGAGGTACACATATTTTTCCCTTAATCCTAATATGTAAGAACTATGCCTTTTACATCTGTAGAGCTTCCCTTCATGGTAAGGCTTAGTATAGGTGGCTGTCGGGGTGGCCGAGTTGGAGAACTTAATAGTCTAAAATCTGTAGTTTGAACCCGGGATCAAATGGAGCCGAGGCCATGAGCTAATGCAAGGAGGGAACCTTATACTTTTGTAGTACTCCATAAGAACTATGCTTGCTTATCTCATAACATATATGCTAAGACTGAAATTTATGGAATGATTTCTTCCCTTCTAGATTCTTGCAATTCCAGCCATTCCATTAACAATGTCAGCTGGGCTACTCTTTGGCTCTGTGATTGGGACGATTATAGTTTCGATCAGTGGAACGGTGAGTGTTTTGTGCAAGTAAAACAAACCAATGGATTAACATATGCCCGCTAATTATTAGCTTATTATCTCCAATCATTTCAGGTTGCTGCTAGTGTTGCGTTTTTGATTGCTCGGTATTTTGCTCGTGAGCGAATTCTTAAGCTCGTAGAAGGAAACAAAAAATTTGCTGCCATTGATAAAGCTATTGGAGAAAATGGTTTCAAAGTAGTCACTCTCCTGCGTTTGAGCCCTTTGCTTCCATTTTCTCTTGGAAATTATTTATATGGACTCACATCTGTCAAATTTGTCCCCTATGTGTTGGGAAGGTCAGCTTTCAATTCCTAAATGATTGTAGCTATTCTTTTCATCAATATGCCTTTTTGGTTTGCCTCAGCCAATATTATCGATACATACGTAATGTTACGAGCTGTATGAACTTTAGAAGTTGTTGAAATCGTAACGGATTTATTATCTGTTTGCAGCTGGCTTGGGATGCTTCCGGGAACATGGGCTTATGTGAGTGCGGGTGCGTTTGGACGTGCAATTATCGTAAGTTTTCGATTTGTCTCCCTTGCTGCTTAGAGATGTTATATTTTTCATAATAACATCTACCTCGTAAATTTGTAGTGTTTAGGCATGTTCTTTTTATGAATGGGTACTCTTTTTGGTTAAAATTTCAATTAGTAAAAAGTTCATGTGACCTGTTAAAAGTACTTTTTAAATTCTTCAATGAGTGCAATTTACTTGAGAAATTAGAAAAATAGATAAAATTTACTTGAAGTGCTTTTTAGAGGGACCAATTAACTCATTTATTTCCCGAAGTGTTTACATTAATAGTGCTTCATGAAAAACACTTTTTTTTAGGAGTTATGTCTAACATATCCTTTTGCTTTCTTGACAATGTATGGTATTGCATTGTGACATGTGTCATGGTCATGCTTGTTTGAGGCGTGTTGTCTGGCCACATGGCAGATGTCTCGGTCTCGCTTGTCCGAGTCGGTCGACAGAGACGTCAACCAATTGAGTGGGGGGAGGATGTCATGGTCATGCTTGTCTAAGGCGTGTTGTCTATGGATGCATGGTTGATGTCCCTGTCTTGCTTGTCCAAGACGTCCATGGTTGCATGTCCGTTCCAAACCCCTTTTACATGATTTCATCTTAGATAGACCTTTACCATTTCATGTTAGGTCAATACAGAGGTGTATAACCGTTCTTCAAAACTATGTCTACACCCGCTAGGGCTAAAATGCCCCAAAATGTACTATAGTGGGATATGACTAGTTGTCACTTCTTCCTACCCTGAGTTATATGTTGTTTAAGCTGTGATATCCTTGATTTGCTTATAGTCATATAACGTTGCTTTCTTCAATTCTTCTAACGGTTTTCAAATGTATTTCCTCGCGCACGTTTTCTAAACCTTTTCTCACAACGTGACTTGAGACCCAAATATATGCCGACGTTGTTCGCAACGTCCGAATTTCTCACGCTTGACTTGTTCGGTTGGTTAGAACAAGTACGGCACAATCACTATCCCGCTATTTCAAGAGTGCGATTGTGACACAATGCATATTGTTTATGGTTTTCCTTTAAAGATAATCTATGACCTCGATTCTTAGTTCGGTTTTCTGTCTCTCGTATTGGTTGTTTCCAATTTTCCATCTTGTTGCCTAGTTTTTTTTCCGCTGTTAATTTTACTTGGCGTTTTTCAGCAAGAAGAATCTGAAGTTGGTTTGCTTGGAGGGGGAAATGGTCAGCTATGGACTTTAGGACTCGGATTGTTGGCAACAGCATTGGCTGCTGCATACGTTACACGATTAGCCAAGGTAATATGGCTTATTGTTACTGCAAACTTTATGCAATCAACTCGTTTTATATTTACGGGATGAACTCGTAATCATGGAATTGACTTGATCATGATATTATATCTTATAGGTTCGTACTTCATAGGTTCTTAACCCCAACTCGGTCCAAGTTTTGATATAACTGATCGACTGATTTTTGTTCCCTCATTAGTATGGATGGATCTTGTACTAGAAACTAAATTCTAGAAGCTATCTAAATGAAGTATAGTAAAAATTTCCCCTCTATCCCACAAAAACCTCACAAAATGATTAGCAAAACGATACTCCTCTCACCTCTCTTCCTTTCCTTAAATCAACGAACACATTGCCTTACACGTTCCTCATCGGGCCCACTTCTCACTAACGTGTGCAAGCAACAACAACATTAATAGCATGTAACCCGAGTAGGAAGATTTAACAACTAGTTGTATCCCCTTATAGTACATTCTAAGACATTTTTATCTAGCAAGAGTGGATGTCATTTTGGCAAGGAGTCATACACCAATGTGGACCATCTATTTGGTCCGATTGAACCCAATTTAGCGAACTTTCATATTTCACTTGTACAGACTTAACTTCAGAGTTGCTTGTTGAAACTCACTCTGAAATCCCGACTTTTGAGGTTATGTTTTGGGGCCTCAACGGGCTCCTGTTAAGCTTGTCCTGATACCATTGGTAACACCGTTGCTTCTAATCTACTTGTACCTTACTTGGGCAACTTTGTCCACTCTTCGTGGTGTGTTAGATAATGCACCATTCACCCACCGTCATTTCCTGATGTAACACAAAAATGCTCATGTAATGTAACTTGGCTCCGCTCATTGATGTGAGTTTAAAGTTTTCCCTTCTAGTCACAGTACAACGACTTCCAGCTTCTCCGTCTCGAGTAGCCAATTAGCCACAAAATACTGTTCCACTTGATGCATCCAACCATAGTGACTCTCCCTGCCGAACATTGGAATGTCTAACTTTCTTAGCCGCAAATCAAAGACTTGAGCTAGCACTTTCCTAATTTCACATTTGCAGTGTTTGGCTCCTCAACCTCATTTTCTTTCTCTTTCCTTGTCTCTTCCACTAGTGGCAGCTTCCTCGGTCATTTTTTACCCTTCCATCTGAGAAAACACCTCCCCGAATCCTTTCTTTACCGACTTAGTCGCGCTCTTAACAATGACTTTTCCCACCTCCTTTCACAAACTTCAGGATCGACCCAACTTTGTTCAACGTTTCCATCCGAACTTCCATGCACATAGTCATTTCCAATCAAGATCGGCTCGGATACCAATGTAGATAAGAATTGAGTTTGTTTATCAACAAGGCTACAAAATTGAGGGAAGAATTCCATAGCTTCCCTGCTGTGAGAATCCGCATTGGTTGGAGAGGGAAACGAAACATTCCTTATAAGGGTGTGGAAATTTCTCCCTAGTAGACGCGTTTTAAAACCAGAAGAGGAAGCCCAAAGAAGACAATATTTGTTAGCAGTAGACTTGGGTGGTTACAAACTCCCATAAGAATCTCACAAAATGATTAGCAAGAAGATACCTGTAACAGCCCAAGCCCACCGCTAGCAGATATTGTTCTCTTTGGGCTTCTCAAGGTTTTTAAAACACGTATGCTAGGGAGAGGTTTCCATACCCTTATGAAGAATGTTTCGTTCTTCTCCCCAACCGATGTGGAATCTCACAATATCCTTCTCAGCTCTCTTCCTTTACCTAAATAAGCAAATGCATTGCCTCGTCTCCTACACCTTCCTCTTTGGGTACACTACTAACTAACTCATGTAACATCATTTCCCCCTCGCTCTCTTCACGCGCCTTCTCTTATACACGTATTTTGTAGGAGTTATATCAATCTGGATGTTGTTTTTAATACTGCAGGATGCTATGAAGGATATTGAATAGACATGGCGCCTTGCTGAATGTAGAAGGTATAAATTTTGAAAATTGGCAATGCTCTGTATATTTTTTTTATTTGACCAATTAAGAGAAACTTCTTACTGCTGCTGATAATGTACAATATTTACAATAATCAATTTAATTAATCTAATTGTAATATTAACTCATTTTACTTTAAATTAGAAAAGATGAGTTTTTGCTGGCCATGGATCATTCAGAAATTCAAATTCCCTCATTCATCCTGTATTTCTCTTTTTGAATTTCAATTATGGAATCTGTAACTTTTTTTATATTGAACATGTTACACTGAGGGTGGGATCTCCGATCTTTTAGATCGTTTGCATGCTTTACGACAATAAATGGAACGATAGGGACAATTAAGTCGACTGCACCATGACCCTTCTGAATGTATTTGATGAACATTGTATTTGTAATTATACCCATCACCCTTCTGAATGTGTATACATAGACAAGCATACATAGGCAGTGGTGTCATACTGTTTAGCAGCGACGGGCTATGACGACAGCTTCAACACATCGAGCATCGAGATCAAACAATGACTTGCTAAACACGACGACTAGTGCCAGCAGAAGGCTACGTTGATGGCGACCGTGACAGCTTCAACACAGCAACAGACCGTAAGATCGGAAGAAGGTGTGTACTAAGCAGCATTATTTATCGACTTAACATTGCTCAACATAGGTTTGGGTCAAAGAGTGCGCTTCATGGGGATAATCCTGGGCACTCTTCTTCTGATTTGTAATTTTTGTTGTCTTTTTGCTTCTTTTTTAGAGAAAACTATTTAGTGGAAATAGTTATGGATCATAATCTAAGGGTCTAAATAGATTTACTTGTAAACTTTTGCAAAATTTAGAAGTTTAAATATAGGACACTGTGTGCCATATGCATAGGAAAATGGCTGGGGATATTGTTTGATAACATATCTGGACGACCA

mRNA sequence

ATGCGCGCCCTTCTGACCTTAATACCGTCATCATCAAACCCCCCACCGCCATGTCTTTCTTCCCTCCATTTCTCTCCCCCTCTTTCCTCCTCTTTCCTTTTCAGCTTCAGACCTAACAAACGCTTCCATTTCCTCAAGCCTTGTTCCTCTCTCAAGCAATCCAAGAAACCTACTCTTCAGAAATCACCCACTACTGCCCCTCAGAGCTTCAAGTGGCTCTTTAGCCCCAAATCCGACGAGGATGACGACGGCGACGCCGATGAAGGGAGTAAGGCCGCGGAGGGAGATCAGGCGGCTTTGGAAGATGACACTGCGGTTAAGGGTACTCTTTTGGCCGGTGTGTTGCTTGTTGGGGTTATCGGTGGATTTGCGTTTGCTGGATATGTTTACAGGGACCCGATTAATGCGTTCTTGAATCAGTTCTCGACGATATGGTCCAGCAGGATATGCTTTATTTGTAGCAGTATTCTTGCAATTCCAGCCATTCCATTAACAATGTCAGCTGGGCTACTCTTTGGCTCTGTGATTGGGACGATTATAGTTTCGATCAGTGGAACGGTTGCTGCTAGTGTTGCGTTTTTGATTGCTCGGTATTTTGCTCGTGAGCGAATTCTTAAGCTCGTAGAAGGAAACAAAAAATTTGCTGCCATTGATAAAGCTATTGGAGAAAATGGTTTCAAAGTAGTCACTCTCCTGCGTTTGAGCCCTTTGCTTCCATTTTCTCTTGGAAATTATTTATATGGACTCACATCTGTCAAATTTGTCCCCTATGTGTTGGGAAGCTGGCTTGGGATGCTTCCGGGAACATGGGCTTATGTGAGTGCGGGTGCGTTTGGACGTGCAATTATCCAAGAAGAATCTGAAGTTGGTTTGCTTGGAGGGGGAAATGGTCAGCTATGGACTTTAGGACTCGGATTGTTGGCAACAGCATTGGCTGCTGCATACGTTACACGATTAGCCAAGGATGCTATGAAGGATATTGAATAGACATGGCGCCTTGCTGAATGTAGAAGACAAGCATACATAGGCAGTGGTGTCATACTGTTTAGCAGCGACGGGCTATGACGACAGCTTCAACACATCGAGCATCGAGATCAAACAATGACTTGCTAAACACGACGACTAGTGCCAGCAGAAGGCTACGTTGATGGCGACCGTGACAGCTTCAACACAGCAACAGACCGTAAGATCGGAAGAAGGTGTGTACTAAGCAGCATTATTTATCGACTTAACATTGCTCAACATAGGTTTGGGTCAAAGAGTGCGCTTCATGGGGATAATCCTGGGCACTCTTCTTCTGATTTGTAATTTTTGTTGTCTTTTTGCTTCTTTTTTAGAGAAAACTATTTAGTGGAAATAGTTATGGATCATAATCTAAGGGTCTAAATAGATTTACTTGTAAACTTTTGCAAAATTTAGAAGTTTAAATATAGGACACTGTGTGCCATATGCATAGGAAAATGGCTGGGGATATTGTTTGATAACATATCTGGACGACCA

Coding sequence (CDS)

ATGCGCGCCCTTCTGACCTTAATACCGTCATCATCAAACCCCCCACCGCCATGTCTTTCTTCCCTCCATTTCTCTCCCCCTCTTTCCTCCTCTTTCCTTTTCAGCTTCAGACCTAACAAACGCTTCCATTTCCTCAAGCCTTGTTCCTCTCTCAAGCAATCCAAGAAACCTACTCTTCAGAAATCACCCACTACTGCCCCTCAGAGCTTCAAGTGGCTCTTTAGCCCCAAATCCGACGAGGATGACGACGGCGACGCCGATGAAGGGAGTAAGGCCGCGGAGGGAGATCAGGCGGCTTTGGAAGATGACACTGCGGTTAAGGGTACTCTTTTGGCCGGTGTGTTGCTTGTTGGGGTTATCGGTGGATTTGCGTTTGCTGGATATGTTTACAGGGACCCGATTAATGCGTTCTTGAATCAGTTCTCGACGATATGGTCCAGCAGGATATGCTTTATTTGTAGCAGTATTCTTGCAATTCCAGCCATTCCATTAACAATGTCAGCTGGGCTACTCTTTGGCTCTGTGATTGGGACGATTATAGTTTCGATCAGTGGAACGGTTGCTGCTAGTGTTGCGTTTTTGATTGCTCGGTATTTTGCTCGTGAGCGAATTCTTAAGCTCGTAGAAGGAAACAAAAAATTTGCTGCCATTGATAAAGCTATTGGAGAAAATGGTTTCAAAGTAGTCACTCTCCTGCGTTTGAGCCCTTTGCTTCCATTTTCTCTTGGAAATTATTTATATGGACTCACATCTGTCAAATTTGTCCCCTATGTGTTGGGAAGCTGGCTTGGGATGCTTCCGGGAACATGGGCTTATGTGAGTGCGGGTGCGTTTGGACGTGCAATTATCCAAGAAGAATCTGAAGTTGGTTTGCTTGGAGGGGGAAATGGTCAGCTATGGACTTTAGGACTCGGATTGTTGGCAACAGCATTGGCTGCTGCATACGTTACACGATTAGCCAAGGATGCTATGAAGGATATTGAATAG

Protein sequence

MRALLTLIPSSSNPPPPCLSSLHFSPPLSSSFLFSFRPNKRFHFLKPCSSLKQSKKPTLQKSPTTAPQSFKWLFSPKSDEDDDGDADEGSKAAEGDQAALEDDTAVKGTLLAGVLLVGVIGGFAFAGYVYRDPINAFLNQFSTIWSSRICFICSSILAIPAIPLTMSAGLLFGSVIGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFAAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEESEVGLLGGGNGQLWTLGLGLLATALAAAYVTRLAKDAMKDIE

Homology

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BLAST of CmaCh09G013070 vs. ExPASy Swiss-Prot
Match: Q55909 (TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0305 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.2e-28
Identity = 73/184 (39.67%), Postives = 112/184 (60.87%), Query Frame = 0


Query: 149 ICFICSSILAIPAIPLTMSAGLLFGSVIGTIIVSISGTVAASVAFLIARYFARERILKLV 208
           + +  ++++ +P   LT+ AG++FG ++G+I V I  T+ A+ AFL+ RY AR  + K +
Sbjct: 25  LLYTVATVVFLPGSILTLGAGVVFGVILGSIYVFIGATLGATAAFLVGRYLARGWVAKKI 84

Query: 209 EGNKKFAAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPG 268
            GN+KF AID+A+G+ G K+V L RLSP+ PF+L NY YG+T+V    YV+GS LGM+PG
Sbjct: 85  AGNQKFKAIDEAVGKEGLKIVILTRLSPVFPFNLLNYAYGITNVSLKDYVIGS-LGMIPG 144

Query: 269 TWAYVSAGAFGRAIIQEESEVGLLGGGNGQL-----WTLGL-GLLATALAAAYVTRLAKD 327
           T  YV  G+           +  LG    Q      WT+ + G +AT     YVT++A+ 
Sbjct: 145 TIMYVYIGSLA-------GSLATLGTATNQANPTLQWTIRIVGFIATVAVTIYVTKIARK 200

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BLAST of CmaCh09G013070 vs. ExPASy Swiss-Prot
Match: P76219 (TVP38/TMEM64 family membrane protein YdjX OS=Escherichia coli (strain K12) OX=83333 GN=ydjX PE=3 SV=2)

HSP 1 Score: 97.1 bits (240), Expect = 4.1e-19
Identity = 51/124 (41.13%), Postives = 80/124 (64.52%), Query Frame = 0


Query: 149 ICFICSSILAIPAIPLTMSAGLLFGSVIGTIIVSISGTVAASVAFLIARYFARERILKLV 208
           + FI +++L +P   L ++ G++FG ++GT++  I+ T+A+S +FL+AR+  R+ +LK V
Sbjct: 53  LLFIIATLLLLPGSILVIAGGIVFGPLLGTLLSLIAATLASSCSFLLARWLGRDLLLKYV 112

Query: 209 EGNKKFAAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPG 268
             +  F AI+K I  NG   + L RL PL P+++ NY YGLT++ F PY L S L  LPG
Sbjct: 113 GHSNTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTTIAFWPYTLISALTTLPG 172

Query: 269 TWAY 273
              Y
Sbjct: 173 IVIY 176

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BLAST of CmaCh09G013070 vs. ExPASy Swiss-Prot
Match: P9WFS2 (TVP38/TMEM64 family membrane protein MT1538 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT1538 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.7e-10
Identity = 42/135 (31.11%), Postives = 70/135 (51.85%), Query Frame = 0


Query: 145 WSSRICFICSSILAIPAIP---LTMSAGLLFGSVIGTIIVSISGTVAASVAFLIARYFAR 204
           W      +  +++ +P  P    T++AGLLFGSV+G  I  +  T +A +A L+ R  A 
Sbjct: 67  WFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVR--AT 126

Query: 205 ERILKLVEGNKKFAAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGS 264
              L  +   +    +D+ + E G+  +  LRL P++PF+  NY  G + V+ + +   +
Sbjct: 127 GWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWAT 186

Query: 265 WLGMLPGTWAYVSAG 277
             G+LPGT A V  G
Sbjct: 187 LAGLLPGTAAVVILG 199

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BLAST of CmaCh09G013070 vs. ExPASy Swiss-Prot
Match: P9WFS3 (TVP38/TMEM64 family membrane protein Rv1491c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv1491c PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.7e-10
Identity = 42/135 (31.11%), Postives = 70/135 (51.85%), Query Frame = 0


Query: 145 WSSRICFICSSILAIPAIP---LTMSAGLLFGSVIGTIIVSISGTVAASVAFLIARYFAR 204
           W      +  +++ +P  P    T++AGLLFGSV+G  I  +  T +A +A L+ R  A 
Sbjct: 67  WFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVR--AT 126

Query: 205 ERILKLVEGNKKFAAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGS 264
              L  +   +    +D+ + E G+  +  LRL P++PF+  NY  G + V+ + +   +
Sbjct: 127 GWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWAT 186

Query: 265 WLGMLPGTWAYVSAG 277
             G+LPGT A V  G
Sbjct: 187 LAGLLPGTAAVVILG 199

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BLAST of CmaCh09G013070 vs. ExPASy Swiss-Prot
Match: P67118 (TVP38/TMEM64 family membrane protein Mb1528c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB1528C PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.7e-10
Identity = 42/135 (31.11%), Postives = 70/135 (51.85%), Query Frame = 0


Query: 145 WSSRICFICSSILAIPAIP---LTMSAGLLFGSVIGTIIVSISGTVAASVAFLIARYFAR 204
           W      +  +++ +P  P    T++AGLLFGSV+G  I  +  T +A +A L+ R  A 
Sbjct: 67  WFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVR--AT 126

Query: 205 ERILKLVEGNKKFAAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGS 264
              L  +   +    +D+ + E G+  +  LRL P++PF+  NY  G + V+ + +   +
Sbjct: 127 GWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWAT 186

Query: 265 WLGMLPGTWAYVSAG 277
             G+LPGT A V  G
Sbjct: 187 LAGLLPGTAAVVILG 199

[Close]

BLAST of CmaCh09G013070 vs. TAIR 10
Match: AT1G22850.1 (SNARE associated Golgi protein family )

HSP 1 Score: 392.1 bits (1006), Expect = 4.3e-109
Identity = 237/342 (69.30%), Postives = 261/342 (76.32%), Query Frame = 0


Query: 1   MRAL---LTLIPSSSNPPPPCLSSLHFSPPLSSSFLFSFRPNKRFHFLKPCSSLKQSKKP 60
           MR+L   LTL  SSS+  P   +S   SPP  SS   SFR  KRFHFLKPCSSLKQ+KK 
Sbjct: 1   MRSLTLGLTLRSSSSSSLPFTCNSRFCSPPPPSS---SFRLYKRFHFLKPCSSLKQTKKK 60

Query: 61  TLQKSPTTA--PQSFKWLFSPKSDEDDDGDADEGSKAAEGDQAALEDDTAVKGTLLAGVL 120
             Q  P+TA  PQS +W F+ KS  D++ + D   K+   D    E D A+KGT+LAGVL
Sbjct: 61  KQQSLPSTAPPPQSLRWFFNSKSTNDENDEDD--VKSESDDDGGSEGDAAIKGTILAGVL 120

Query: 121 LVGVIGGFAFAGYVYRDPINAFLNQFSTI-----WSSRICFIC----SSILAIPAIPLTM 180
           L+G +GGFA  GYVYRD IN FL QFST       +    FI       ILAIPA+PLTM
Sbjct: 121 LIGTVGGFAGVGYVYRDQINTFLTQFSTYIEGYGTAGYALFIAVYAGLEILAIPALPLTM 180

Query: 181 SAGLLFGSVIGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFAAIDKAIGENGF 240
           SAGLLFG +IGTIIVSISGT+AASVAFLIARYFARERILKLVE NKKF AIDKAIGENGF
Sbjct: 181 SAGLLFGPLIGTIIVSISGTMAASVAFLIARYFARERILKLVEDNKKFLAIDKAIGENGF 240

Query: 241 KVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEE 300
           +VVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPG+WAYVSAGAFGRAIIQEE
Sbjct: 241 RVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGSWAYVSAGAFGRAIIQEE 300

Query: 301 SEVGLLGGGNGQLWTLGLGLLATALAAAYVTRLAKDAMKDIE 329
           S VG L GGNGQL TLG+GLL TALA  YVT LAKDA+KDI+
Sbjct: 301 SNVG-LPGGNGQLLTLGVGLLVTALAGTYVTSLAKDAIKDID 336

[Close]

BLAST of CmaCh09G013070 vs. TAIR 10
Match: AT5G19070.1 (SNARE associated Golgi protein family )

HSP 1 Score: 99.4 bits (246), Expect = 5.8e-21
Identity = 62/178 (34.83%), Postives = 101/178 (56.74%), Query Frame = 0


Query: 149 ICFICSSILAIPAIPLTMSAGLLFGSVIGTIIVSISGTVAASVAFLIARYFARERILKLV 208
           + +I  ++LA+PA  LT+  G LFG  IG +  S+  T+ +  AFL+ R   +  ++  +
Sbjct: 55  VAYIPLTVLAVPASVLTLGGGYLFGLPIGFVADSVGATLGSGAAFLLGRTIGKPFVVAKL 114

Query: 209 EGNKKFAAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPG 268
           +   +F ++  AI ++GFK+  LLRL+PLLPFS+ NYL  +T ++  PY+L SWLGM+P 
Sbjct: 115 KDYPQFQSVALAIEKSGFKICLLLRLAPLLPFSMLNYLLSVTPIRLGPYLLSSWLGMMPI 174

Query: 269 TWAYVSAGAFGRAIIQEESEVGLLGGGNGQLWT-LGLGLLATALAAAYVTRLAKDAMK 326
           T A V  G   + +     +      G    W  L   L+ + +    VT++AKDA++
Sbjct: 175 TLALVYVGTTLKDLSDVTHKWSEFSPGR---WAFLISSLVISVILMVCVTKVAKDALR 229

[Close]

BLAST of CmaCh09G013070 vs. TAIR 10
Match: AT1G03260.1 (SNARE associated Golgi protein family )

HSP 1 Score: 96.7 bits (239), Expect = 3.8e-20
Identity = 51/128 (39.84%), Postives = 81/128 (63.28%), Query Frame = 0


Query: 149 ICFICSSILAIPAIPLTMSAGLLFGSVIGTIIVSISGTVAASVAFLIARYFARERILKLV 208
           + +I  +I+A+PA  LT+  G LFG  +G +  S+  T+ A+ AFL+ R   +  +   +
Sbjct: 57  LAYIPLTIVAVPASVLTLGGGYLFGLPVGFVADSLGATLGATAAFLLGRTIGKSYVTSKI 116

Query: 209 EGNKKFAAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPG 268
           +   KF A+  AI ++GFK+V LLR+ P+LPF++ NYL  +T V+   Y+L +WLGM+P 
Sbjct: 117 KHYPKFQAVSVAIQKSGFKIVLLLRVVPILPFNMLNYLLSVTPVRLGEYMLATWLGMMPI 176

Query: 269 TWAYVSAG 277
           T+A V  G
Sbjct: 177 TFALVYVG 184

[Close]

BLAST of CmaCh09G013070 vs. TAIR 10
Match: AT4G22850.1 (SNARE associated Golgi protein family )

HSP 1 Score: 63.2 bits (152), Expect = 4.6e-10
Identity = 65/231 (28.14%), Postives = 105/231 (45.45%), Query Frame = 0


Query: 115 LLVGVIGGFAFAGYVYRDPINAFLNQFSTI-WSSR-----IC--FICSSI-----LAIPA 174
           LL   +   A  GY++  P+         I W  R     +C   + +S+     + +P+
Sbjct: 61  LLFAFLAALAVVGYIWIGPLIMDKELIPLIQWEIRTFTHPVCGLLVFASVAIFPTILLPS 120

Query: 175 IPLTMSAGLLFGSVIGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFAAIDKAI 234
            P    AG+ FG   G +++  +  V  S+ + I + F   +I   +E     AA+ +A 
Sbjct: 121 TPSMWIAGMTFGYGYGFLLIISAAAVGVSLPYFIGQLFC-HKIQGWLERYPDQAAVLRAA 180

Query: 235 GENG----FKVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGTWAYVSAGA 294
           GE      F +VTL+R+SP  P+ L NY    T VK+ PY+ GS LGM+P  +  +  G 
Sbjct: 181 GEGNWLHQFLLVTLIRISP-FPYILYNYCSVATRVKYGPYITGSLLGMVPEVFVAIYTGI 240

Query: 295 FGRAIIQEESEVGLLGGGNGQLWTLGLGLLATALAAAYVTRLAKDAMKDIE 329
             R  + E S     G    Q+    LG LAT      +T+ AK  ++ ++
Sbjct: 241 LVRT-LAEASSAEEQGLSVTQVILNILGFLATVATTILITKYAKRQLETMK 288

[Close]

BLAST of CmaCh09G013070 vs. TAIR 10
Match: AT2G02370.1 (SNARE associated Golgi protein family )

HSP 1 Score: 62.8 bits (151), Expect = 6.0e-10
Identity = 50/182 (27.47%), Postives = 94/182 (51.65%), Query Frame = 0


Query: 156 ILAIPAIPLTMSAGLLFGSVIGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFA 215
           +  IP+ P    AG++FG  +G +I+ +  T+   + +LI   F R+R+ + ++   + A
Sbjct: 114 VFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLMF-RDRLHQWLKRWPRQA 173

Query: 216 AIDKAIGENG----FKVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGTWA 275
           A+ +   E      F+VV + R+SP  P+++ NY   +TS++F PY  GS  GM+P  + 
Sbjct: 174 AVLRLAAEGSWFHQFRVVAIFRVSP-FPYTIFNYAIVVTSMRFWPYFFGSIAGMIPEAFI 233

Query: 276 YVSAGAFGRAIIQEESEVGLLGGGNGQLWTLGLGLLATALAAAYVTRL-----AKDAMKD 329
           Y+ +G   R     +        G+ +L T+ +     +L  A VT +     AK A+++
Sbjct: 234 YIYSGRLIRTFADVQY-------GHQRLTTVEIVYNVISLVIAVVTTVAFTVYAKRALRE 286

The following BLAST results are available for this feature:

BLAST of CmaCh09G013070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q55909	6.2e-28	39.67	TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 68...	[more]
P76219	4.1e-19	41.13	TVP38/TMEM64 family membrane protein YdjX OS=Escherichia coli (strain K12) OX=83...	[more]
P9WFS2	7.7e-10	31.11	TVP38/TMEM64 family membrane protein MT1538 OS=Mycobacterium tuberculosis (strai...	[more]
P9WFS3	7.7e-10	31.11	TVP38/TMEM64 family membrane protein Rv1491c OS=Mycobacterium tuberculosis (stra...	[more]
P67118	7.7e-10	31.11	TVP38/TMEM64 family membrane protein Mb1528c OS=Mycobacterium bovis (strain ATCC...	[more]

BLAST of CmaCh09G013070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22850.1	4.3e-109	69.30	SNARE associated Golgi protein family	[more]
AT5G19070.1	5.8e-21	34.83	SNARE associated Golgi protein family	[more]
AT1G03260.1	3.8e-20	39.84	SNARE associated Golgi protein family	[more]
AT4G22850.1	4.6e-10	28.14	SNARE associated Golgi protein family	[more]
AT2G02370.1	6.0e-10	27.47	SNARE associated Golgi protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032816	SNARE associated Golgi protein	PFAM	PF09335	SNARE_assoc	coord: 159..277 e-value: 1.4E-23 score: 83.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..98
None	No IPR available	PANTHER	PTHR46826	FAMILY NOT NAMED	coord: 8..328

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G013070.1	CmaCh09G013070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane