CmaCh09G011620 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh09G011620
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	eukaryotic translation initiation factor 4B3-like
Location	Cma_Chr09: 6791543 .. 6792058 (-)
RNA-Seq Expression	CmaCh09G011620
Synteny	CmaCh09G011620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGGCCGAGGGAAGAGGTTCTAGCTGAGAAAGGACATGATTGGAAAAAACTAGACAAGGATTTAGAGTCGAAAATTATGGAAATGTCAAGGGAGAAGACTGAAAAATCCAACGCCATTGGGAAAAAGAGCTTTGGCAATGGAATTGGTCAGGCTGCTGAGGACAAAACAGAGAGGAGCTGGAGGAAGCCGAGTTTCAATAACTTTAGACCCGTGGGGCGGGGTGCTGAACCTGATAAAAATCCTAGTGGTTTTGTGGATGCTAATTGGGCTGGTGACATGAACGATAGATGCTCCACAAGAGGTTTTTGTTTTATAGCAGGCTCTGTTGCAATTTCATGGTGCAGTAAAGAGCAAAGCATCGTTTCTTTGTCATGTTGTGAAGCAGAATATGTAGGTGCTAGAATGGCTACTCAAGGATTTTTGTGGCTGATCAGGAGGCTTATTCAAGAAAGGGTGACTACTCATTATCATTTGTTTGAGAGAATGCTAACGCAGGATGTTGAATTGTAG

mRNA sequence

ATGGTGAGGCCGAGGGAAGAGGTTCTAGCTGAGAAAGGACATGATTGGAAAAAACTAGACAAGGATTTAGAGTCGAAAATTATGGAAATGTCAAGGGAGAAGACTGAAAAATCCAACGCCATTGGGAAAAAGAGCTTTGGCAATGGAATTGGTCAGGCTGCTGAGGACAAAACAGAGAGGAGCTGGAGGAAGCCGAGTTTCAATAACTTTAGACCCGTGGGGCGGGGTGCTGAACCTGATAAAAATCCTAGTGGTTTTGTGGATGCTAATTGGGCTGGTGACATGAACGATAGATGCTCCACAAGAGGTTTTTGTTTTATAGCAGGCTCTGTTGCAATTTCATGGTGCAGTAAAGAGCAAAGCATCGTTTCTTTGTCATGTTGTGAAGCAGAATATGTAGGTGCTAGAATGGCTACTCAAGGATTTTTGTGGCTGATCAGGAGGCTTATTCAAGAAAGGGTGACTACTCATTATCATTTGTTTGAGAGAATGCTAACGCAGGATGTTGAATTGTAG

Coding sequence (CDS)

ATGGTGAGGCCGAGGGAAGAGGTTCTAGCTGAGAAAGGACATGATTGGAAAAAACTAGACAAGGATTTAGAGTCGAAAATTATGGAAATGTCAAGGGAGAAGACTGAAAAATCCAACGCCATTGGGAAAAAGAGCTTTGGCAATGGAATTGGTCAGGCTGCTGAGGACAAAACAGAGAGGAGCTGGAGGAAGCCGAGTTTCAATAACTTTAGACCCGTGGGGCGGGGTGCTGAACCTGATAAAAATCCTAGTGGTTTTGTGGATGCTAATTGGGCTGGTGACATGAACGATAGATGCTCCACAAGAGGTTTTTGTTTTATAGCAGGCTCTGTTGCAATTTCATGGTGCAGTAAAGAGCAAAGCATCGTTTCTTTGTCATGTTGTGAAGCAGAATATGTAGGTGCTAGAATGGCTACTCAAGGATTTTTGTGGCTGATCAGGAGGCTTATTCAAGAAAGGGTGACTACTCATTATCATTTGTTTGAGAGAATGCTAACGCAGGATGTTGAATTGTAG

Protein sequence

MVRPREEVLAEKGHDWKKLDKDLESKIMEMSREKTEKSNAIGKKSFGNGIGQAAEDKTERSWRKPSFNNFRPVGRGAEPDKNPSGFVDANWAGDMNDRCSTRGFCFIAGSVAISWCSKEQSIVSLSCCEAEYVGARMATQGFLWLIRRLIQERVTTHYHLFERMLTQDVEL

Homology

[Close]

BLAST of CmaCh09G011620 vs. ExPASy Swiss-Prot
Match: Q9SZP8 (Eukaryotic translation initiation factor 4B3 OS=Arabidopsis thaliana OX=3702 GN=EIF4B3 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-08
Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 3   RPREEVLAEKGHDWKKLDKDLESKIMEMSREKTEKSN--AIGKKSFGNGIGQAAEDKTER 62
           RPREEVLAEKG DWK++D+ LE++ ++      EK N  + GK  FG G G+  E++ ER
Sbjct: 319 RPREEVLAEKGQDWKEIDEKLEAEKLKDIAAAMEKPNEKSTGKMGFGLGNGRKDEERIER 378

Query: 63  SWRK 65
           SWRK
Sbjct: 379 SWRK 382

[Close]

BLAST of CmaCh09G011620 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07
Identity = 29/64 (45.31%), Postives = 38/64 (59.38%), Query Frame = 0


Query: 85  GFVDANWAGDMNDRCSTRGFCFIAGSVAISWCSKEQSIVSLSCCEAEYVGARMATQGFLW 144
           G+ DA+WAGD+  R ST G+ F      +SW SK+Q  V+LS  E EY+    ATQ  +W
Sbjct: 73  GYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMALSEATQEAVW 132

Query: 145 LIRR 149
           L  R
Sbjct: 133 LTVR 136

[Close]

BLAST of CmaCh09G011620 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.9e-07
Identity = 30/68 (44.12%), Postives = 43/68 (63.24%), Query Frame = 0


Query: 85   GFVDANWAGDMNDRCSTRGFCFIAGSVAISWCSKEQSIVSLSCCEAEYVGARMATQGFLW 144
            G+ DA+ AGD+++R S+ G+ F     AISW SK Q  V+LS  EAEY+ A    +  +W
Sbjct: 1177 GYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIW 1236

Query: 145  LIRRLIQE 153
            L +R +QE
Sbjct: 1237 L-KRFLQE 1243

[Close]

BLAST of CmaCh09G011620 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.9e-05
Identity = 25/63 (39.68%), Postives = 30/63 (47.62%), Query Frame = 0


Query: 82  NPSGFVDANWAGDMNDRCSTRGFCFIAGSVAISWCSKEQSIVSLSCCEAEYVGARMATQG 141
           N   F D++WAG  + R ST GFC   G   ISW +K Q  VS S  E EY    +    
Sbjct: 163 NVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAE 222

Query: 142 FLW 145
             W
Sbjct: 223 LTW 225

[Close]

BLAST of CmaCh09G011620 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.5e-04
Identity = 25/66 (37.88%), Postives = 33/66 (50.00%), Query Frame = 0


Query: 86   FVDANWAGDMNDRCSTRGFCFIAGSVAISWCSKEQSIVSLSCCEAEYVGARMATQGFLWL 145
            + DA+WAGD +D  ST G+    G   ISW SK+Q  V  S  EAEY      +    W+
Sbjct: 1312 YSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWI 1371

Query: 146  IRRLIQ 152
               L +
Sbjct: 1372 CSLLTE 1377

[Close]

BLAST of CmaCh09G011620 vs. ExPASy TrEMBL
Match: A0A6J1JP41 (eukaryotic translation initiation factor 4B3-like OS=Cucurbita maxima OX=3661 GN=LOC111486238 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 6.8e-21
Identity = 60/96 (62.50%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 3   RPREEVLAEKGHDWKKLDKDLESKIMEMSREKTEKSNAIGKKSFGNGIGQAAEDKTERSW 62
           RPREEVLAEKGHDWKKLD++LE KI E+S EKTEKSNAIGKKSFG+G G AAED+TERSW
Sbjct: 324 RPREEVLAEKGHDWKKLDEELEMKIKELSMEKTEKSNAIGKKSFGDGTGHAAEDRTERSW 383

Query: 63  RKP-SFNNFRPVGRGAEPDKNPSGFVDANWAGDMND 98
           RKP S     P  R    + N +G  + +  G+ N+
Sbjct: 384 RKPESPPEESPESRPDSVEDNENGDGEGDGDGNKNE 419

[Close]

BLAST of CmaCh09G011620 vs. ExPASy TrEMBL
Match: A0A6J1EKJ0 (eukaryotic translation initiation factor 4B3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435193 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.5e-20
Identity = 60/89 (67.42%), Postives = 67/89 (75.28%), Query Frame = 0


Query: 3   RPREEVLAEKGHDWKKLDKDLESKIMEMSREKTEKSNAIGKKSFGNGIGQAAEDKTERSW 62
           RPREEVLAEKGHDWKKLD++LE KI E+S EKTEKSNAIGKKSFGNG  +AAED+TERSW
Sbjct: 329 RPREEVLAEKGHDWKKLDEELELKIKEVSMEKTEKSNAIGKKSFGNGTTRAAEDRTERSW 388

Query: 63  RKP-SFNNFRPVGRGAEPDKNPSGFVDAN 91
           RKP S     P  R    + N +G  D N
Sbjct: 389 RKPESPPEESPESRPDSVEDNENGEEDGN 417

[Close]

BLAST of CmaCh09G011620 vs. ExPASy TrEMBL
Match: A0A6J1ERF5 (eukaryotic translation initiation factor 4B3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435193 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.5e-20
Identity = 60/89 (67.42%), Postives = 67/89 (75.28%), Query Frame = 0


Query: 3   RPREEVLAEKGHDWKKLDKDLESKIMEMSREKTEKSNAIGKKSFGNGIGQAAEDKTERSW 62
           RPREEVLAEKGHDWKKLD++LE KI E+S EKTEKSNAIGKKSFGNG  +AAED+TERSW
Sbjct: 307 RPREEVLAEKGHDWKKLDEELELKIKEVSMEKTEKSNAIGKKSFGNGTTRAAEDRTERSW 366

Query: 63  RKP-SFNNFRPVGRGAEPDKNPSGFVDAN 91
           RKP S     P  R    + N +G  D N
Sbjct: 367 RKPESPPEESPESRPDSVEDNENGEEDGN 395

[Close]

BLAST of CmaCh09G011620 vs. ExPASy TrEMBL
Match: A0A443N8T5 (Integrase, catalytic core OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00329300 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.7e-19
Identity = 58/121 (47.93%), Postives = 73/121 (60.33%), Query Frame = 0


Query: 84   SGFVDANWAGDMNDRCSTRGFCFIAGSVAISWCSKEQSIVSLSCCEAEYVGARMATQGFL 143
            +GFVDA+WAGD+NDRCST G+CF  GS AISWCSK+Q+ V+LS CEAEYV A MATQ  +
Sbjct: 1131 TGFVDADWAGDLNDRCSTTGYCFNMGSAAISWCSKKQTTVALSSCEAEYVAATMATQECI 1190

Query: 144  WLIRRLIQE--------------------------------RVTTHYHLF-ERMLTQDVE 172
            WL +RLIQE                                 + TH+H   E++LTQD++
Sbjct: 1191 WL-KRLIQEMFSALDYPIPIHCDNESAIKLAGNPVFHARTKHIETHFHFAREKVLTQDIQ 1250

[Close]

BLAST of CmaCh09G011620 vs. ExPASy TrEMBL
Match: A0A6J1F1Z6 (uncharacterized protein LOC111439027 OS=Cucurbita moschata OX=3662 GN=LOC111439027 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.7e-17
Identity = 49/65 (75.38%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 3   RPREEVLAEKGHDWKKLDKDLESKIMEMSREKTEKSNAIGKKSFGNGIGQAAEDKTERSW 62
           R REEVLAEKG DWKKLD++LESKI+E+S EKTEKSN IGKKSFG G GQAA+DKT++SW
Sbjct: 237 RLREEVLAEKGQDWKKLDEELESKIIEVSGEKTEKSNPIGKKSFGKGTGQAAKDKTKKSW 296

Query: 63  RKPSF 68
           R+  F
Sbjct: 297 REAEF 301

[Close]

BLAST of CmaCh09G011620 vs. NCBI nr
Match: XP_023520720.1 (uncharacterized protein LOC111784136 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.1 bits (492), Expect = 9.7e-46
Identity = 99/148 (66.89%), Postives = 107/148 (72.30%), Query Frame = 0


Query: 12  KGHDWKKLDKDLESKIMEMSREKTEKSNAIGKKSFGNGIGQAAEDKTERSWRKPSFNNFR 71
           KG   K L+ D                   GK++FGNG  Q AEDKTERSWRK SFNN  
Sbjct: 77  KGRYQKGLNSDRVGDGFRNYGSMVRMRGVTGKRAFGNGTCQTAEDKTERSWRKLSFNNSG 136

Query: 72  PVGRGAEPDKNPSGFVDANWAGDMNDRCSTRGFCFIAGSVAISWCSKEQSIVSLSCCEAE 131
            VGRGA+PDKNP+GFVDANWAGD+NDRCSTRGFCF A S AISWCSK+QS V+LS CEAE
Sbjct: 137 LVGRGAQPDKNPTGFVDANWAGDVNDRCSTRGFCFTADSAAISWCSKKQSTVALSSCEAE 196

Query: 132 YVGARMATQGFLWLIRRLIQERVTTHYH 160
           YV   MATQ FLWLIRRLIQE VTTHYH
Sbjct: 197 YVATTMATQEFLWLIRRLIQEMVTTHYH 224

[Close]

BLAST of CmaCh09G011620 vs. NCBI nr
Match: KAG6583607.1 (Secreted RxLR effector protein 161, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 110.9 bits (276), Expect = 1.1e-20
Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = 0


Query: 64  KPSFNNFRPVGRGAEPDKNPSGFVDANWAGDMNDRCSTRGFCFIAGSVAISWCSKEQSIV 123
           +P FNN R +GRGA+PDKN S FVDA+WAGD+NDR STRGFCF AG VAISWCSK+QS V
Sbjct: 92  RPGFNNSRLMGRGAQPDKNSSVFVDADWAGDVNDRHSTRGFCFTAGFVAISWCSKKQSTV 151

Query: 124 SLSCCEAEYVGARMATQGFLWLIRRL 150
           + S CE+EYV  +       WL++ +
Sbjct: 152 AFSSCESEYVALQ-------WLLKNV 170

[Close]

BLAST of CmaCh09G011620 vs. NCBI nr
Match: XP_022989048.1 (eukaryotic translation initiation factor 4B3-like [Cucurbita maxima])

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-20
Identity = 60/96 (62.50%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 3   RPREEVLAEKGHDWKKLDKDLESKIMEMSREKTEKSNAIGKKSFGNGIGQAAEDKTERSW 62
           RPREEVLAEKGHDWKKLD++LE KI E+S EKTEKSNAIGKKSFG+G G AAED+TERSW
Sbjct: 324 RPREEVLAEKGHDWKKLDEELEMKIKELSMEKTEKSNAIGKKSFGDGTGHAAEDRTERSW 383

Query: 63  RKP-SFNNFRPVGRGAEPDKNPSGFVDANWAGDMND 98
           RKP S     P  R    + N +G  + +  G+ N+
Sbjct: 384 RKPESPPEESPESRPDSVEDNENGDGEGDGDGNKNE 419

[Close]

BLAST of CmaCh09G011620 vs. NCBI nr
Match: XP_022928335.1 (eukaryotic translation initiation factor 4B3 isoform X2 [Cucurbita moschata])

HSP 1 Score: 109.4 bits (272), Expect = 3.1e-20
Identity = 60/89 (67.42%), Postives = 67/89 (75.28%), Query Frame = 0


Query: 3   RPREEVLAEKGHDWKKLDKDLESKIMEMSREKTEKSNAIGKKSFGNGIGQAAEDKTERSW 62
           RPREEVLAEKGHDWKKLD++LE KI E+S EKTEKSNAIGKKSFGNG  +AAED+TERSW
Sbjct: 307 RPREEVLAEKGHDWKKLDEELELKIKEVSMEKTEKSNAIGKKSFGNGTTRAAEDRTERSW 366

Query: 63  RKP-SFNNFRPVGRGAEPDKNPSGFVDAN 91
           RKP S     P  R    + N +G  D N
Sbjct: 367 RKPESPPEESPESRPDSVEDNENGEEDGN 395

[Close]

BLAST of CmaCh09G011620 vs. NCBI nr
Match: XP_022928334.1 (eukaryotic translation initiation factor 4B3 isoform X1 [Cucurbita moschata])

HSP 1 Score: 109.4 bits (272), Expect = 3.1e-20
Identity = 60/89 (67.42%), Postives = 67/89 (75.28%), Query Frame = 0


Query: 3   RPREEVLAEKGHDWKKLDKDLESKIMEMSREKTEKSNAIGKKSFGNGIGQAAEDKTERSW 62
           RPREEVLAEKGHDWKKLD++LE KI E+S EKTEKSNAIGKKSFGNG  +AAED+TERSW
Sbjct: 329 RPREEVLAEKGHDWKKLDEELELKIKEVSMEKTEKSNAIGKKSFGNGTTRAAEDRTERSW 388

Query: 63  RKP-SFNNFRPVGRGAEPDKNPSGFVDAN 91
           RKP S     P  R    + N +G  D N
Sbjct: 389 RKPESPPEESPESRPDSVEDNENGEEDGN 417

[Close]

BLAST of CmaCh09G011620 vs. TAIR 10
Match: AT4G38710.1 (glycine-rich protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09
Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 3   RPREEVLAEKGHDWKKLDKDLESKIMEMSREKTEKSN--AIGKKSFGNGIGQAAEDKTER 62
           RPREEVLAEKG DWK++D+ LE++ ++      EK N  + GK  FG G G+  E++ ER
Sbjct: 319 RPREEVLAEKGQDWKEIDEKLEAEKLKDIAAAMEKPNEKSTGKMGFGLGNGRKDEERIER 378

Query: 63  SWRK 65
           SWRK
Sbjct: 379 SWRK 382

[Close]

BLAST of CmaCh09G011620 vs. TAIR 10
Match: AT4G38710.2 (glycine-rich protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09
Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 3   RPREEVLAEKGHDWKKLDKDLESKIMEMSREKTEKSN--AIGKKSFGNGIGQAAEDKTER 62
           RPREEVLAEKG DWK++D+ LE++ ++      EK N  + GK  FG G G+  E++ ER
Sbjct: 319 RPREEVLAEKGQDWKEIDEKLEAEKLKDIAAAMEKPNEKSTGKMGFGLGNGRKDEERIER 378

Query: 63  SWRK 65
           SWRK
Sbjct: 379 SWRK 382

[Close]

BLAST of CmaCh09G011620 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 52.8 bits (125), Expect = 3.3e-07
Identity = 26/60 (43.33%), Postives = 34/60 (56.67%), Query Frame = 0


Query: 86  FVDANWAGDMNDRCSTRGFCFIAGSVAISWCSKEQSIVSLSCCEAEYVGARMATQGFLWL 145
           F DA++    + R ST G+C   G+  ISW SK+Q +VS S  EAEY     AT   +WL
Sbjct: 445 FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWL 504

[Close]

BLAST of CmaCh09G011620 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 2.8e-06
Identity = 25/63 (39.68%), Postives = 30/63 (47.62%), Query Frame = 0


Query: 82  NPSGFVDANWAGDMNDRCSTRGFCFIAGSVAISWCSKEQSIVSLSCCEAEYVGARMATQG 141
           N   F D++WAG  + R ST GFC   G   ISW +K Q  VS S  E EY    +    
Sbjct: 163 NVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAE 222

Query: 142 FLW 145
             W
Sbjct: 223 LTW 225

[Close]

BLAST of CmaCh09G011620 vs. TAIR 10
Match: AT1G13020.1 (eukaryotic initiation factor 4B2 )

HSP 1 Score: 45.1 bits (105), Expect = 6.8e-05
Identity = 22/37 (59.46%), Postives = 29/37 (78.38%), Query Frame = 0


Query: 3   RPREEVLAEKGHDWKKLDKDLESKIMEMSREKTEKSN 40
           RPRE+VLAEKG DWKKLD D+E+K  + SR  + +S+
Sbjct: 299 RPREQVLAEKGLDWKKLDSDIEAKKGQTSRPSSAQSS 335

The following BLAST results are available for this feature:

BLAST of CmaCh09G011620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZP8	1.7e-08	51.56	Eukaryotic translation initiation factor 4B3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
P0CV72	1.1e-07	45.31	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
P10978	1.9e-07	44.12	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P92519	3.9e-05	39.68	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q94HW2	1.5e-04	37.88	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]

BLAST of CmaCh09G011620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JP41	6.8e-21	62.50	eukaryotic translation initiation factor 4B3-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1EKJ0	1.5e-20	67.42	eukaryotic translation initiation factor 4B3 isoform X1 OS=Cucurbita moschata OX...	[more]
A0A6J1ERF5	1.5e-20	67.42	eukaryotic translation initiation factor 4B3 isoform X2 OS=Cucurbita moschata OX...	[more]
A0A443N8T5	1.7e-19	47.93	Integrase, catalytic core OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKA...	[more]
A0A6J1F1Z6	2.7e-17	75.38	uncharacterized protein LOC111439027 OS=Cucurbita moschata OX=3662 GN=LOC1114390...	[more]

BLAST of CmaCh09G011620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520720.1	9.7e-46	66.89	uncharacterized protein LOC111784136 [Cucurbita pepo subsp. pepo]	[more]
KAG6583607.1	1.1e-20	61.63	Secreted RxLR effector protein 161, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022989048.1	1.4e-20	62.50	eukaryotic translation initiation factor 4B3-like [Cucurbita maxima]	[more]
XP_022928335.1	3.1e-20	67.42	eukaryotic translation initiation factor 4B3 isoform X2 [Cucurbita moschata]	[more]
XP_022928334.1	3.1e-20	67.42	eukaryotic translation initiation factor 4B3 isoform X1 [Cucurbita moschata]	[more]

BLAST of CmaCh09G011620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38710.1	1.2e-09	51.56	glycine-rich protein	[more]
AT4G38710.2	1.2e-09	51.56	glycine-rich protein	[more]
AT4G23160.1	3.3e-07	43.33	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	2.8e-06	39.68	DNA/RNA polymerases superfamily protein	[more]
AT1G13020.1	6.8e-05	59.46	eukaryotic initiation factor 4B2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010433	Plant specific eukaryotic initiation factor 4B	PFAM	PF06273	eIF-4B	coord: 2..50 e-value: 9.5E-8 score: 31.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..61
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 85..152 e-value: 9.99023E-26 score: 93.6869

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G011620.1	CmaCh09G011620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003743	translation initiation factor activity