CmaCh09G011180 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh09G011180
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr09: 6173379 .. 6173873 (+)
RNA-Seq ExpressionCmaCh09G011180
SyntenyCmaCh09G011180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTTTCATTTTTATGCATTTTCTTTTAGTCTGCATTCTGAAGTGAATATTTATGTGATTTTAGCGCCAGCCCTCTGCCAAAGTTGTACACGACACGAACAGTTCAGTTTATTGGTTCGTAGTCTTGGGAATAGGTATATAGATAGTCTCGTGTTTTCGAGATGTTTTAGAGGGGTTGGGAGGCTATATGTGATCAATTTAGGTACACACAATATTTGAAAGGTATTATGATCAAATTCTAAACACCTGTTAAGTAGGTGTTTATGGTTGATATCATGAATGCTTAAAATCTAGGATTGATCAGTGCTGGGAGTACCATCATCAGATAATCAATGATATAGAGGTTCTGTTCATCTAAGATGCCTTGACTCTATGAAATCTATCTGATATGTATGTCATTGTTAAGACACTTCTAACAATGCCAATGTGCCATACTCAAGGGTGATGATGCCGGTGGCTATGGGCGACTATGGCAAACGTACCGACTCGTGA

mRNA sequence

ATGTGTTTTCATTTTTATGCATTTTCTTTTAGTCTGCATTCTGAAGTGAATATTTATGTGATTTTAGCGCCAGCCCTCTGCCAAAGTTGTACACGACACGAACAGTTCAGTTTATTGGTTCGTAGTCTTGGGAATAGGTATATAGATAGTCTCGTGTTTTCGAGATGTTTTAGAGGGGTTGGGAGGCTATATGTGATCAATTTAGACACTTCTAACAATGCCAATGTGCCATACTCAAGGGTGATGATGCCGGTGGCTATGGGCGACTATGGCAAACGTACCGACTCGTGA

Coding sequence (CDS)

ATGTGTTTTCATTTTTATGCATTTTCTTTTAGTCTGCATTCTGAAGTGAATATTTATGTGATTTTAGCGCCAGCCCTCTGCCAAAGTTGTACACGACACGAACAGTTCAGTTTATTGGTTCGTAGTCTTGGGAATAGGTATATAGATAGTCTCGTGTTTTCGAGATGTTTTAGAGGGGTTGGGAGGCTATATGTGATCAATTTAGACACTTCTAACAATGCCAATGTGCCATACTCAAGGGTGATGATGCCGGTGGCTATGGGCGACTATGGCAAACGTACCGACTCGTGA

Protein sequence

MCFHFYAFSFSLHSEVNIYVILAPALCQSCTRHEQFSLLVRSLGNRYIDSLVFSRCFRGVGRLYVINLDTSNNANVPYSRVMMPVAMGDYGKRTDS
Homology
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BLAST of CmaCh09G011180 vs. NCBI nr
Match: KAG7025056.1 (hypothetical protein SDJN02_13879, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 62.0 bits (149), Expect = 3.2e-06
Identity = 28/30 (93.33%), Postives = 28/30 (93.33%), Query Frame = 0 

Query: 67  NLDTSNNANVPYSRVMMPVAMGDYGKRTDS 97
           N DTSNNANVPYSRVMMPVAMGDYGKR DS
Sbjct: 134 NRDTSNNANVPYSRVMMPVAMGDYGKRIDS 163

The following BLAST results are available for this feature:
BLAST of CmaCh09G011180 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh09G011180 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh09G011180 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7025056.13.2e-0693.33hypothetical protein SDJN02_13879, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CmaCh09G011180 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G011180.1CmaCh09G011180.1mRNA