CmaCh09G010720 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACAGCACAAATCCACAGACCAGATTCACTGTAGACTTAAAAATGTAACAGCCCAGATGCACCGTAGGTATAAAAATGTAACAGCCCAAATGCATTGTAGGTTTAAAAATGTAGCCGCCTAGATTTGTTAGCAGATTAGGGTTTAGGGTTTAGGTTCATCGGTAGCATATATTGTCGTCTTTGGATTTGTCCGAAATTTATAATTAAATCTTAAAATTTATATTAGGTTAAAAAATGTATATTGTCTTTTTGGGTTTTCCGCATCCTTATTAAAAGGTTTATAAAATGTGTTTTGTTCTCGTCCCTAACTAATGTGAAACATTACAATCTACCCCTCTTTAGGATTAGTGTCGTCGCTGGCATTCGTTCTTTTCTTCTCCCAACCAATGTGGGTTATAAAGGGTTTCCGTACCCTTATTAAAGGGTTATAAAGGGTGTTTTGTTTTCCTCCCAACTAATGTGGAACATCACAATCCACCCCGTTCGAGGCCCAGCGTTGTCGCTAACACTCAACACTCATTTCTTTCTTTAATCGATGTGGCACCCCCCACCAACAAGGCTTTATAAACGATGTTTTGTTCTCCTCCTCAATCAACGTCCCGACATTACAAAAAATATATAATATTTGCAATAAAAGAAGGTGAATAAATAGTTTTTGGAATTTAGAATAGGAAATGGGTCAACACGTTGTCCAAGTCCCCAACAAAGGGAAATTTCATGCCTAATTTAAACAAGATTCCCTATCCCATCCAATCTTTGTCACAATTTCCCCTTATCACCTCATTATTACTATTAATATTCAAACTCGACCACACTATAGTGTTTATAAATTTCAAAAGTTATCGAACTAAAATAAATATTATTATTAAACAAATATATGTAACTCTGTATGTGAAGGGGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGAAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCATCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGA ATGGAACAGCACAAATCCACAGACCAGATTCACTGTAGACTTAAAAATGTAACAGCCCAGATGCACCGGGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGAAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCATCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGA ATGGAACAGCACAAATCCACAGACCAGATTCACTGTAGACTTAAAAATGTAACAGCCCAGATGCACCGGGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGAAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCATCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGA MEQHKSTDQIHCRLKNVTAQMHRGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKHPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRR Homology
BLAST of CmaCh09G010720 vs. ExPASy Swiss-Prot
Match: Q14FB6 (50S ribosomal protein L2-B, chloroplastic OS=Populus alba OX=43335 GN=rpl2-B PE=3 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 9.0e-55 Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 0
BLAST of CmaCh09G010720 vs. ExPASy Swiss-Prot
Match: Q4VZK5 (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=3 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 9.0e-55 Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 0
BLAST of CmaCh09G010720 vs. ExPASy Swiss-Prot
Match: A4GYV2 (50S ribosomal protein L2, chloroplastic OS=Populus trichocarpa OX=3694 GN=rpl2-A PE=3 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 9.0e-55 Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 0
BLAST of CmaCh09G010720 vs. ExPASy Swiss-Prot
Match: Q14F95 (50S ribosomal protein L2-A, chloroplastic OS=Populus alba OX=43335 GN=rpl2-A PE=3 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 1.2e-54 Identity = 111/127 (87.40%), Postives = 115/127 (90.55%), Query Frame = 0
BLAST of CmaCh09G010720 vs. ExPASy Swiss-Prot
Match: B1A976 (50S ribosomal protein L2, chloroplastic OS=Carica papaya OX=3649 GN=rpl2-A PE=3 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 2.6e-54 Identity = 105/107 (98.13%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of CmaCh09G010720 vs. ExPASy TrEMBL
Match: A0A5N5IV47 (50S ribosomal protein L2, chloroplastic OS=Salix brachista OX=2182728 GN=rpl2 PE=3 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 2.0e-52 Identity = 112/131 (85.50%), Postives = 117/131 (89.31%), Query Frame = 0
BLAST of CmaCh09G010720 vs. ExPASy TrEMBL
Match: A0A7S8WWC5 (Ribosomal protein L2 OS=Populus wilsonii OX=179741 GN=rpl2 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 2.0e-52 Identity = 112/131 (85.50%), Postives = 117/131 (89.31%), Query Frame = 0
BLAST of CmaCh09G010720 vs. ExPASy TrEMBL
Match: A0A2P1CV39 (50S ribosomal protein L2, chloroplastic OS=Populus trinervis OX=2107771 GN=rpl2 PE=3 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 2.0e-52 Identity = 112/131 (85.50%), Postives = 117/131 (89.31%), Query Frame = 0
BLAST of CmaCh09G010720 vs. ExPASy TrEMBL
Match: A0A6C0SYG5 (50S ribosomal protein L2, chloroplastic OS=Bennettiodendron leprosipes OX=179723 GN=rpl2 PE=3 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 2.0e-52 Identity = 112/131 (85.50%), Postives = 117/131 (89.31%), Query Frame = 0
BLAST of CmaCh09G010720 vs. ExPASy TrEMBL
Match: A0A6C0SNK3 (50S ribosomal protein L2, chloroplastic OS=Flacourtia rukam OX=1085434 GN=rpl2 PE=3 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 2.0e-52 Identity = 112/131 (85.50%), Postives = 117/131 (89.31%), Query Frame = 0
BLAST of CmaCh09G010720 vs. NCBI nr
Match: YP_009554936.1 (ribosomal protein L2 [Populus hopeiensis] >YP_009554959.1 ribosomal protein L2 [Populus hopeiensis] >AZZ07505.1 ribosomal protein L2 [Populus rotundifolia var. duclouxiana] >AZZ08451.1 ribosomal protein L2 [Populus davidiana] >AZZ07506.1 ribosomal protein L2 [Populus rotundifolia var. duclouxiana] >AZZ07935.1 ribosomal protein L2 [Populus hopeiensis] >AZZ07936.1 ribosomal protein L2 [Populus hopeiensis]) HSP 1 Score: 214.9 bits (546), Expect = 4.0e-52 Identity = 112/131 (85.50%), Postives = 117/131 (89.31%), Query Frame = 0
BLAST of CmaCh09G010720 vs. NCBI nr
Match: YP_009555875.1 (ribosomal protein L2 [Populus x canadensis] >YP_009555961.1 ribosomal protein L2 [Populus deltoides] >QOW38863.1 ribosomal protein L2 [Populus fremontii] >QOW39551.1 ribosomal protein L2 [Populus angustifolia] >AZZ08281.1 ribosomal protein L2 [Populus x canadensis] >AZZ08367.1 ribosomal protein L2 [Populus deltoides]) HSP 1 Score: 214.9 bits (546), Expect = 4.0e-52 Identity = 112/131 (85.50%), Postives = 117/131 (89.31%), Query Frame = 0
BLAST of CmaCh09G010720 vs. NCBI nr
Match: SPO51858.1 (ribosomal protein L2 [Salix viminalis] >SPO51925.1 ribosomal protein L2 [Salix viminalis]) HSP 1 Score: 214.9 bits (546), Expect = 4.0e-52 Identity = 112/131 (85.50%), Postives = 117/131 (89.31%), Query Frame = 0
BLAST of CmaCh09G010720 vs. NCBI nr
Match: QGU84796.1 (ribosomal protein L2 [Itoa orientalis] >QGU84819.1 ribosomal protein L2 [Itoa orientalis]) HSP 1 Score: 214.9 bits (546), Expect = 4.0e-52 Identity = 112/131 (85.50%), Postives = 117/131 (89.31%), Query Frame = 0
BLAST of CmaCh09G010720 vs. NCBI nr
Match: YP_009554506.1 (ribosomal protein L2 [Populus tomentosa] >AZZ08624.1 ribosomal protein L2 [Populus alba var. pyramidalis] >AZZ08710.1 ribosomal protein L2 [Populus alba] >AZZ07076.1 ribosomal protein L2 [Populus tomentosa] >QDF63950.1 ribosomal protein L2 [Populus alba var. pyramidalis] >QDF63951.1 ribosomal protein L2 [Populus alba var. pyramidalis]) HSP 1 Score: 214.9 bits (546), Expect = 4.0e-52 Identity = 112/131 (85.50%), Postives = 117/131 (89.31%), Query Frame = 0
BLAST of CmaCh09G010720 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 ) HSP 1 Score: 211.1 bits (536), Expect = 5.4e-55 Identity = 104/107 (97.20%), Postives = 104/107 (97.20%), Query Frame = 0
BLAST of CmaCh09G010720 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 ) HSP 1 Score: 211.1 bits (536), Expect = 5.4e-55 Identity = 104/107 (97.20%), Postives = 104/107 (97.20%), Query Frame = 0
BLAST of CmaCh09G010720 vs. TAIR 10
Match: AT2G44065.1 (Ribosomal protein L2 family ) HSP 1 Score: 92.8 bits (229), Expect = 2.2e-19 Identity = 53/116 (45.69%), Postives = 67/116 (57.76%), Query Frame = 0
BLAST of CmaCh09G010720 vs. TAIR 10
Match: AT2G44065.2 (Ribosomal protein L2 family ) HSP 1 Score: 92.8 bits (229), Expect = 2.2e-19 Identity = 53/116 (45.69%), Postives = 67/116 (57.76%), Query Frame = 0
BLAST of CmaCh09G010720 vs. TAIR 10
Match: AT3G51190.1 (Ribosomal protein L2 family ) HSP 1 Score: 74.3 bits (181), Expect = 7.9e-14 Identity = 45/96 (46.88%), Postives = 57/96 (59.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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