CmaCh09G009590 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh09G009590
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionTetraacyldisaccharide 4'-kinase
LocationCma_Chr09: 4832531 .. 4834924 (+)
RNA-Seq ExpressionCmaCh09G009590
SyntenyCmaCh09G009590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACGAATCCAATGCAGGTAGATCCACATACGGTCGAGTTGGTATATTTGAAGTTGGCAAGACCATGTTCGGGTTTCTAGCAAAAATGGGCCCAATCAATGTACTACGACGTTTGCATGGTCTTACGAGCATCAAACCATCTAAAAGTCACGACCGAAATTGTTTATATACAATTTATAAATTATTTCCCTCTTCCATAATTAATTTTTTTTAATATTTTTCTAAAATCTTAAGATATTAACATTATTTTTTAAAGCTTACGATTGGACGATTGTTTTTATTATTATTATTATTATTTATTTTAAAAAATTAAAGATATATTTTTTTTATATTATTGAAGGAATTATTTGTTAACTAAAGTTTAATGTATATATATTTTTTATTTTCTTTTAATTTTTAAAATATTATTTAAATTTTTTAAAAGTTCGAAGGTTATTTTTACTCCGCGGGACATGACCGTAGCATTTGCTTCTTCGTCTTCATCCATGGAGAAGCTGAAGGTCGGCGATCGAAATCGCCTACGGAAGGGACCACGCTAAGCTCTCTTCTCTGCAACGCTCTCTCTCTCCTTCCTCTACTTGGTGTCTTCTCTCTACAAGCTCCGTCTGTCCCTTCGTCACCACTTCTACCTCTACGGCATATTTCGCAAGCACTGGTAAGAGTTGGATCTCATTTGAACTGTTTGATCATCGCTTCTTATTGTTTTTATTGATCGACGTTAGGATTAGGATTTATTAGATCACAGTGAACAAATTTGGCTGAATACGCGGCCGATTCCTGGTCTGGATGTTGTTTCTGTTGGATTTCTTAGTGGCATTGAAAGATTTTTTGGAATTTGGGAGCACAATTGAGTTTCTAAGCCCTAGATTTTGACCCCGTATATCAGCCCACTGTTAATAGATATGAAAATATTATTATTCAACTAAAGAATTAGATTTATATTCATAACCTTTAAATAGAATACAAGATATTAAATAATATCTCTAAAGAAAATATAAACTAACTAAATCTAATAAAATAAAATAAACTATCAATCAAATCTAAATTCTTCCAAGTTCGTTTGTTTTTGCAATGATTTTGTTTCATCAGTGAGGCGAAGCTTGGGATCGATGCAATGGATTGAATTAAGTTTTGTTTTTCAGTTATTGAATTGCAATGGCCAGGGGTTTGTTGATATTTATTGTACTGTTGTAGTTCGTATTGACATCTGTTGATATGAATTCTGGTTCCAGTCATTAGTGTTGGGAATTTGATTTGGGAGACCGGTTATGTATTGTCATCAGCCTCACGATTTTAAACACATCTATTAGGGAGATGTTTCTACACTTTATGAGAAATGTTTCATTCTCCCCTCCAACCAATGTGGGATCTCACAATCCAACCCTGTTGAGGATCAGCGTCCTCGCTAGCAAGCCGTTGGGTGTCTAGTTCATATACCATTTATAATAGTCTAAGCCTACTGCTAATAAATATTGTCGACTTTGGCATGTTACATATTGTCGTCAGTCTCACCGTTTTAAAGCGCGTCTTTAGTAATTAAGTATTGGAACCGGTACTCATCCAATTATTATCCTATTTGGGCTTTTCCTAGACTTTCCCATTACGCGTTTGTTAGGGAAAGGTTTCCACACCTTACAAGAAATGCTTAGTTCCCCTATCGACGTGGGATATCTCACTTTTTCTTTTTCCTTTTTTGATAATCTCCCAAGATCTTGATCGAGTATCTTATTTTAACATAACAATCAAGGACTTCTAGCGAAGCCAATTTAGACTTGGTGATGCTTCAAGATTCTTTGTTTGATAACTGTTCATAACTTTACAGTATCCTAAGAATTTAGTCGATGATCCTTCTGGTTTGATTTCCTGTCAGGGTTATGGTGGTGGGGATGAAGCCAAAATGCTTAGAAGGCATCTTGCTGGGAGTACCATTAAAGTATGCATTGGAGCAGACAGGAGAGCTTCTGCTGCATGAACAAGTAGGTAATCTTCCCAAGTCCGAAAAAATTAGTGCTGTTACTCTGGATGATATTGTCTTCTTTGGGCTTTCTCTTTTGGGCTTCCTTAAATTGCTTCTTCTGTTAGGGGAAAGTTTTCACACCCTTATAAATGGTGGTTTTGTTCCCTTCCCCAACCAATGTGGAACATAGGATAGTTGTTTTCCATTCGTAGTATAGGTTGAATTTCATTTGCATTTATAGTATAGGTTAGTATAGGTTGAATTCCCGTTTGCGTCATTAGTATAGGTTAGTATAAGTTGAATTGTAATCGCATTAATAAATCATAGGTTAGTATAGAACATTTATTTCAGAGTTGTTTTTCGTTTCTTTCCCTTGTATTTGTTATTCATGAGAGTAATAAAAGATAAACTTATGTCGCATTTATGATAAGAGCC

mRNA sequence

ATGTACGAATCCAATGCAGCTGAAGGTCGGCGATCGAAATCGCCTACGGAAGGGACCACGCTAAGCTCTCTTCTCTGCAACGCTCTCTCTCTCCTTCCTCTACTTGGTGTCTTCTCTCTACAAGCTCCGTCTGTCCCTTCGTCACCACTTCTACCTCTACGGCATATTTCGCAAGCACTGGGTTATGGTGGTGGGGATGAAGCCAAAATGCTTAGAAGGCATCTTGCTGGGAGTACCATTAAAGTATGCATTGGAGCAGACAGGAGAGCTTCTGCTGCATGAACAAGTAGGTAATCTTCCCAAGTCCGAAAAAATTAGTGCTGTTACTCTGGATGATATTGTCTTCTTTGGGCTTTCTCTTTTGGGCTTCCTTAAATTGCTTCTTCTGTTAGGGGAAAGTTTTCACACCCTTATAAATGGTGGTTTTGTTCCCTTCCCCAACCAATGTGGAACATAGGATAGTTGTTTTCCATTCGTAGTATAGGTTGAATTTCATTTGCATTTATAGTATAGGTTAGTATAGGTTGAATTCCCGTTTGCGTCATTAGTATAGGTTAGTATAAGTTGAATTGTAATCGCATTAATAAATCATAGGTTAGTATAGAACATTTATTTCAGAGTTGTTTTTCGTTTCTTTCCCTTGTATTTGTTATTCATGAGAGTAATAAAAGATAAACTTATGTCGCATTTATGATAAGAGCC

Coding sequence (CDS)

ATGTACGAATCCAATGCAGCTGAAGGTCGGCGATCGAAATCGCCTACGGAAGGGACCACGCTAAGCTCTCTTCTCTGCAACGCTCTCTCTCTCCTTCCTCTACTTGGTGTCTTCTCTCTACAAGCTCCGTCTGTCCCTTCGTCACCACTTCTACCTCTACGGCATATTTCGCAAGCACTGGGTTATGGTGGTGGGGATGAAGCCAAAATGCTTAGAAGGCATCTTGCTGGGAGTACCATTAAAGTATGCATTGGAGCAGACAGGAGAGCTTCTGCTGCATGA

Protein sequence

MYESNAAEGRRSKSPTEGTTLSSLLCNALSLLPLLGVFSLQAPSVPSSPLLPLRHISQALGYGGGDEAKMLRRHLAGSTIKVCIGADRRASAA
Homology
[Close]
BLAST of CmaCh09G009590 vs. ExPASy Swiss-Prot
Match: Q8LEA0 (Probable tetraacyldisaccharide 4'-kinase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=LPXK PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.8e-04
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0 

Query: 61  GYGGGDEAKMLRRHLAGSTIKVCIGADRRASAA 94
           GY GGDE KML RHL G  +K+ +GA+R A+AA
Sbjct: 100 GYAGGDEVKMLERHLRGGPVKIGVGANRAATAA 132

[Close]
BLAST of CmaCh09G009590 vs. ExPASy TrEMBL
Match: A0A6J1IDU8 (uncharacterized protein LOC111475889 OS=Cucurbita maxima OX=3661 GN=LOC111475889 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.6e-38
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 7   AEGRRSKSPTEGTTLSSLLCNALSLLPLLGVFSLQAPSVPSSPLLPLRHISQALGYGGGD 66
           AEGRRSKSPTEGTTLSSLLCNALSLLPLLGVFSLQAPSVPSSPLLPLRHISQALGYGGGD
Sbjct: 28  AEGRRSKSPTEGTTLSSLLCNALSLLPLLGVFSLQAPSVPSSPLLPLRHISQALGYGGGD 87

Query: 67  EAKMLRRHLAGSTIKVCIGADRRASAA 94
           EAKMLRRHLAGSTIKVCIGADRRASAA
Sbjct: 88  EAKMLRRHLAGSTIKVCIGADRRASAA 114

[Close]
BLAST of CmaCh09G009590 vs. ExPASy TrEMBL
Match: A0A5A7SH30 (Tetraacyldisaccharide 4'-kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00870 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.7e-05
Identity = 36/84 (42.86%), Postives = 50/84 (59.52%), Query Frame = 0 

Query: 10  RRSKSPTEGTTLSSLLCNALSLLPLLGVFSLQAPSVPSSPLLPLRHISQALGYGGGDEAK 69
           R+ + P    ++ +L        P++   +L   +   SPL+  R      GY GGDEAK
Sbjct: 55  RKHRLPVPVISVGNLTWGGNGKTPMVEFIALWLAASGISPLILNR------GYAGGDEAK 114

Query: 70  MLRRHLAGSTIKVCIGADRRASAA 94
           MLRRHLAGS++KV +GADRRA+AA
Sbjct: 115 MLRRHLAGSSVKVGVGADRRATAA 132

[Close]
BLAST of CmaCh09G009590 vs. ExPASy TrEMBL
Match: A0A6J1J296 (Tetraacyldisaccharide 4'-kinase OS=Cucurbita maxima OX=3661 GN=LOC111480597 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.7e-05
Identity = 28/33 (84.85%), Postives = 30/33 (90.91%), Query Frame = 0 

Query: 61 GYGGGDEAKMLRRHLAGSTIKVCIGADRRASAA 94
          GY GGDEAKMLRRHLAGS +KV IGADRRA+AA
Sbjct: 20 GYAGGDEAKMLRRHLAGSLVKVGIGADRRATAA 52

[Close]
BLAST of CmaCh09G009590 vs. ExPASy TrEMBL
Match: A0A0A0K5E1 (Tetraacyldisaccharide 4'-kinase OS=Cucumis sativus OX=3659 GN=Csa_7G212110 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.7e-05
Identity = 36/84 (42.86%), Postives = 50/84 (59.52%), Query Frame = 0 

Query: 10  RRSKSPTEGTTLSSLLCNALSLLPLLGVFSLQAPSVPSSPLLPLRHISQALGYGGGDEAK 69
           R+ + P    ++ +L        P++   +L   +   SPL+  R      GY GGDEAK
Sbjct: 55  RKHRLPVPVISVGNLTWGGNGKTPMVEFIALWLAASGISPLILNR------GYAGGDEAK 114

Query: 70  MLRRHLAGSTIKVCIGADRRASAA 94
           MLRRHLAGS++KV +GADRRA+AA
Sbjct: 115 MLRRHLAGSSVKVGVGADRRATAA 132

[Close]
BLAST of CmaCh09G009590 vs. ExPASy TrEMBL
Match: A0A6J1CET5 (Tetraacyldisaccharide 4'-kinase OS=Momordica charantia OX=3673 GN=LOC111010580 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.7e-05
Identity = 28/33 (84.85%), Postives = 30/33 (90.91%), Query Frame = 0 

Query: 61 GYGGGDEAKMLRRHLAGSTIKVCIGADRRASAA 94
          GY GGDEAKMLRRHLAGS +KV IGADRRA+AA
Sbjct: 22 GYAGGDEAKMLRRHLAGSPVKVGIGADRRATAA 54

[Close]
BLAST of CmaCh09G009590 vs. NCBI nr
Match: XP_022975727.1 (uncharacterized protein LOC111475889 [Cucurbita maxima])

HSP 1 Score: 167.5 bits (423), Expect = 5.3e-38
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 7   AEGRRSKSPTEGTTLSSLLCNALSLLPLLGVFSLQAPSVPSSPLLPLRHISQALGYGGGD 66
           AEGRRSKSPTEGTTLSSLLCNALSLLPLLGVFSLQAPSVPSSPLLPLRHISQALGYGGGD
Sbjct: 28  AEGRRSKSPTEGTTLSSLLCNALSLLPLLGVFSLQAPSVPSSPLLPLRHISQALGYGGGD 87

Query: 67  EAKMLRRHLAGSTIKVCIGADRRASAA 94
           EAKMLRRHLAGSTIKVCIGADRRASAA
Sbjct: 88  EAKMLRRHLAGSTIKVCIGADRRASAA 114

[Close]
BLAST of CmaCh09G009590 vs. NCBI nr
Match: KAG6592049.1 (hypothetical protein SDJN03_14395, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 59.7 bits (143), Expect = 1.6e-05
Identity = 29/38 (76.32%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 56  ISQALGYGGGDEAKMLRRHLAGSTIKVCIGADRRASAA 94
           ++   GYGGGDEAKML R LAGS IK+CIGADRRASAA
Sbjct: 70  LNSCQGYGGGDEAKMLIRLLAGSPIKICIGADRRASAA 107

[Close]
BLAST of CmaCh09G009590 vs. NCBI nr
Match: XP_022940448.1 (probable tetraacyldisaccharide 4'-kinase, mitochondrial isoform X2 [Cucurbita moschata])

HSP 1 Score: 58.5 bits (140), Expect = 3.5e-05
Identity = 28/33 (84.85%), Postives = 30/33 (90.91%), Query Frame = 0 

Query: 61 GYGGGDEAKMLRRHLAGSTIKVCIGADRRASAA 94
          GY GGDEAKMLRRHLAGS +KV IGADRRA+AA
Sbjct: 20 GYAGGDEAKMLRRHLAGSLVKVGIGADRRATAA 52

[Close]
BLAST of CmaCh09G009590 vs. NCBI nr
Match: XP_011658980.1 (probable tetraacyldisaccharide 4'-kinase, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 58.5 bits (140), Expect = 3.5e-05
Identity = 36/84 (42.86%), Postives = 50/84 (59.52%), Query Frame = 0 

Query: 10  RRSKSPTEGTTLSSLLCNALSLLPLLGVFSLQAPSVPSSPLLPLRHISQALGYGGGDEAK 69
           R+ + P    ++ +L        P++   +L   +   SPL+  R      GY GGDEAK
Sbjct: 55  RKHRLPVPVISVGNLTWGGNGKTPMVEFIALWLAASGISPLILNR------GYAGGDEAK 114

Query: 70  MLRRHLAGSTIKVCIGADRRASAA 94
           MLRRHLAGS++KV +GADRRA+AA
Sbjct: 115 MLRRHLAGSSVKVGVGADRRATAA 132

[Close]
BLAST of CmaCh09G009590 vs. NCBI nr
Match: KAA0025146.1 (putative tetraacyldisaccharide 4'-kinase [Cucumis melo var. makuwa] >TYK23105.1 putative tetraacyldisaccharide 4'-kinase [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 3.5e-05
Identity = 36/84 (42.86%), Postives = 50/84 (59.52%), Query Frame = 0 

Query: 10  RRSKSPTEGTTLSSLLCNALSLLPLLGVFSLQAPSVPSSPLLPLRHISQALGYGGGDEAK 69
           R+ + P    ++ +L        P++   +L   +   SPL+  R      GY GGDEAK
Sbjct: 55  RKHRLPVPVISVGNLTWGGNGKTPMVEFIALWLAASGISPLILNR------GYAGGDEAK 114

Query: 70  MLRRHLAGSTIKVCIGADRRASAA 94
           MLRRHLAGS++KV +GADRRA+AA
Sbjct: 115 MLRRHLAGSSVKVGVGADRRATAA 132

[Close]
BLAST of CmaCh09G009590 vs. TAIR 10
Match: AT3G20480.2 (tetraacyldisaccharide 4'-kinase family protein )

HSP 1 Score: 51.2 bits (121), Expect = 5.1e-07
Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 0 

Query: 48  SPLLPLRHISQALGYGGGDEAKMLRRHLAGSTIKVCIGADRRASAA 94
           +PL+  R ++   GY GGDE KML RHL G  +K+ +GA+R A+AA
Sbjct: 93  TPLILTRTLTYCQGYAGGDEVKMLERHLRGGPVKIGVGANRAATAA 138

[Close]
BLAST of CmaCh09G009590 vs. TAIR 10
Match: AT3G20480.1 (tetraacyldisaccharide 4'-kinase family protein )

HSP 1 Score: 46.6 bits (109), Expect = 1.3e-05
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0 

Query: 61  GYGGGDEAKMLRRHLAGSTIKVCIGADRRASAA 94
           GY GGDE KML RHL G  +K+ +GA+R A+AA
Sbjct: 100 GYAGGDEVKMLERHLRGGPVKIGVGANRAATAA 132

The following BLAST results are available for this feature:
BLAST of CmaCh09G009590 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LEA01.8e-0460.61Probable tetraacyldisaccharide 4'-kinase, mitochondrial OS=Arabidopsis thaliana ... [more]
BLAST of CmaCh09G009590 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IDU82.6e-38100.00uncharacterized protein LOC111475889 OS=Cucurbita maxima OX=3661 GN=LOC111475889... [more]
A0A5A7SH301.7e-0542.86Tetraacyldisaccharide 4'-kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A6J1J2961.7e-0584.85Tetraacyldisaccharide 4'-kinase OS=Cucurbita maxima OX=3661 GN=LOC111480597 PE=4... [more]
A0A0A0K5E11.7e-0542.86Tetraacyldisaccharide 4'-kinase OS=Cucumis sativus OX=3659 GN=Csa_7G212110 PE=3 ... [more]
A0A6J1CET51.7e-0584.85Tetraacyldisaccharide 4'-kinase OS=Momordica charantia OX=3673 GN=LOC111010580 P... [more]
BLAST of CmaCh09G009590 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022975727.15.3e-38100.00uncharacterized protein LOC111475889 [Cucurbita maxima][more]
KAG6592049.11.6e-0576.32hypothetical protein SDJN03_14395, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022940448.13.5e-0584.85probable tetraacyldisaccharide 4'-kinase, mitochondrial isoform X2 [Cucurbita mo... [more]
XP_011658980.13.5e-0542.86probable tetraacyldisaccharide 4'-kinase, mitochondrial isoform X1 [Cucumis sati... [more]
KAA0025146.13.5e-0542.86putative tetraacyldisaccharide 4'-kinase [Cucumis melo var. makuwa] >TYK23105.1 ... [more]
BLAST of CmaCh09G009590 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G20480.25.1e-0750.00tetraacyldisaccharide 4'-kinase family protein [more]
AT3G20480.11.3e-0560.61tetraacyldisaccharide 4'-kinase family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G009590.1CmaCh09G009590.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process