CmaCh09G007000 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACGTCTGGGAACCACCACATTATCAACATAATGCCCAATTCAACCACTCTGCTATTCCAACGGTAACTTATCACTGTCTTCTTCCTCCTCTCTCCCTTCCCTCTGCATTTCTCCACACCATTAAAGACAGATTCGAGCTTTTCAGCTGAACCAGAGCTCCGAAGAAGAAGAATAAGAAGATCCCAAATGAATATGCGGTCATGGGAAGACGACGAGGAGAAGGAGAGACTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTCTGCAAATTCCCAGACAACTCCGCCTTTGATTTTGATTACTCTCAAAGCACCATTTGGTCCCCTTTGGTCCCCCGGCCTTACCAGTCCATGGATTTGGATTTGATTACCCCCATCAAGCTTCCTTCCGATTCAGAAATGGCTGCGTCGGAGAAGACGACGGCGGAGAAGAACAGCTTGAAGAAAGCCACCTCCAACCTCAAGAAGAAGCTTCTCTCCAATGGCGTCAGCATCCGTTTCGGGATTTCGAAAAGCAACAGGAAGATGAAGAAGATGAAGAACAAGAAATTGGCGGCTGATTTCTCCCCCAAGCCTCTGCAAGCTGCTGCTTGCTACCCACATAACAAAAAGGTGCTTAGTTTTGAGTATTGATTCTGTTTCAGTAAGATCTGGGTATATTGTTCTTGGTGTTCTTGATGTTCTTCACTGCAATTTAACTTCCAATTCCATGAATGTTCAGGCATGGAGCAAGCTGCTGAAAGCAGCCACCAAGCATTTCAAGAAGAAGAAGAAGGATCCTGCAACTCAAATGAAACTCTATTTCTAAAGCAATGATTCATAGAATCATCATTTTACAGTGTTCTTATTTCATTTCCTCTGTTTTTTGAAGAACAGAACATGTGTAATTAACTTTATTTCATAGATTCTCATGTAAAAACAGACCCAAAAACAAAGAGATTCATGGGATCAGATTAAGCCAACATGGTATCAATCAAATTCTGAAATGAAATGTAAGAGGAACCACCATGAATGACGGCGTTTCTACTTTTCCGGCTAATTTCTTTCATTCTCTTCCTCACCTCCTTCCCTGCATCATCGTCCGCCATTAAACATCGAATAGCTTTCTCGATCTGATCGGCAGTCACCAGATATCCACAGTCCCTATGGTAATCGATCTTCATCTCCACCGCTAATTTTAATTCTCTAACAAGCACGAAGGCGTTTATCTGTTGCTCGGCGTACTGCGGCCAAGCCACGAGCGGCACGGCGTGCCAAATGCTTTCCAAAACAGAGTTCCATCCGCAGTGCGAAACGAACCCACCAATGGCTCTGTGGGCTAAAACATCCACTTGTCGAACCCACCCACATACCCTTCCTTTCC AACGTCTGGGAACCACCACATTATCAACATAATGCCCAATTCAACCACTCTGCTATTCCAACGGTAACTTATCACTGTCTTCTTCCTCCTCTCTCCCTTCCCTCTGCATTTCTCCACACCATTAAAGACAGATTCGAGCTTTTCAGCTGAACCAGAGCTCCGAAGAAGAAGAATAAGAAGATCCCAAATGAATATGCGGTCATGGGAAGACGACGAGGAGAAGGAGAGACTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTCTGCAAATTCCCAGACAACTCCGCCTTTGATTTTGATTACTCTCAAAGCACCATTTGGTCCCCTTTGGTCCCCCGGCCTTACCAGTCCATGGATTTGGATTTGATTACCCCCATCAAGCTTCCTTCCGATTCAGAAATGGCTGCGTCGGAGAAGACGACGGCGGAGAAGAACAGCTTGAAGAAAGCCACCTCCAACCTCAAGAAGAAGCTTCTCTCCAATGGCGTCAGCATCCGTTTCGGGATTTCGAAAAGCAACAGGAAGATGAAGAAGATGAAGAACAAGAAATTGGCGGCTGATTTCTCCCCCAAGCCTCTGCAAGCTGCTGCTTGCTACCCACATAACAAAAAGGCATGGAGCAAGCTGCTGAAAGCAGCCACCAAGCATTTCAAGAAGAAGAAGAAGGATCCTGCAACTCAAATGAAACTCTATTTCTAAAGCAATGATTCATAGAATCATCATTTTACAGTGTTCTTATTTCATTTCCTCTGTTTTTTGAAGAACAGAACATGTGTAATTAACTTTATTTCATAGATTCTCATGTAAAAACAGACCCAAAAACAAAGAGATTCATGGGATCAGATTAAGCCAACATGGTATCAATCAAATTCTGAAATGAAATGTAAGAGGAACCACCATGAATGACGGCGTTTCTACTTTTCCGGCTAATTTCTTTCATTCTCTTCCTCACCTCCTTCCCTGCATCATCGTCCGCCATTAAACATCGAATAGCTTTCTCGATCTGATCGGCAGTCACCAGATATCCACAGTCCCTATGGTAATCGATCTTCATCTCCACCGCTAATTTTAATTCTCTAACAAGCACGAAGGCGTTTATCTGTTGCTCGGCGTACTGCGGCCAAGCCACGAGCGGCACGGCGTGCCAAATGCTTTCCAAAACAGAGTTCCATCCGCAGTGCGAAACGAACCCACCAATGGCTCTGTGGGCTAAAACATCCACTTGTCGAACCCACCCACATACCCTTCCTTTCC ATGAATATGCGGTCATGGGAAGACGACGAGGAGAAGGAGAGACTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTCTGCAAATTCCCAGACAACTCCGCCTTTGATTTTGATTACTCTCAAAGCACCATTTGGTCCCCTTTGGTCCCCCGGCCTTACCAGTCCATGGATTTGGATTTGATTACCCCCATCAAGCTTCCTTCCGATTCAGAAATGGCTGCGTCGGAGAAGACGACGGCGGAGAAGAACAGCTTGAAGAAAGCCACCTCCAACCTCAAGAAGAAGCTTCTCTCCAATGGCGTCAGCATCCGTTTCGGGATTTCGAAAAGCAACAGGAAGATGAAGAAGATGAAGAACAAGAAATTGGCGGCTGATTTCTCCCCCAAGCCTCTGCAAGCTGCTGCTTGCTACCCACATAACAAAAAGGCATGGAGCAAGCTGCTGAAAGCAGCCACCAAGCATTTCAAGAAGAAGAAGAAGGATCCTGCAACTCAAATGAAACTCTATTTCTAA MNMRSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYQSMDLDLITPIKLPSDSEMAASEKTTAEKNSLKKATSNLKKKLLSNGVSIRFGISKSNRKMKKMKNKKLAADFSPKPLQAAACYPHNKKAWSKLLKAATKHFKKKKKDPATQMKLYF Homology
BLAST of CmaCh09G007000 vs. ExPASy TrEMBL
Match: A0A6J1IGW0 (uncharacterized protein LOC111477106 OS=Cucurbita maxima OX=3661 GN=LOC111477106 PE=4 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 9.3e-90 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
BLAST of CmaCh09G007000 vs. ExPASy TrEMBL
Match: A0A6J1F9I6 (uncharacterized protein LOC111443318 OS=Cucurbita moschata OX=3662 GN=LOC111443318 PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 4.3e-87 Identity = 170/175 (97.14%), Postives = 172/175 (98.29%), Query Frame = 0
BLAST of CmaCh09G007000 vs. ExPASy TrEMBL
Match: A0A6J1CL72 (uncharacterized protein LOC111012179 OS=Momordica charantia OX=3673 GN=LOC111012179 PE=4 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 8.4e-67 Identity = 140/178 (78.65%), Postives = 158/178 (88.76%), Query Frame = 0
BLAST of CmaCh09G007000 vs. ExPASy TrEMBL
Match: A0A0A0L354 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G620590 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 3.0e-64 Identity = 139/176 (78.98%), Postives = 149/176 (84.66%), Query Frame = 0
BLAST of CmaCh09G007000 vs. ExPASy TrEMBL
Match: A0A5D3DWX3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002690 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 1.9e-63 Identity = 138/176 (78.41%), Postives = 147/176 (83.52%), Query Frame = 0
BLAST of CmaCh09G007000 vs. NCBI nr
Match: XP_022976862.1 (uncharacterized protein LOC111477106 [Cucurbita maxima]) HSP 1 Score: 339.3 bits (869), Expect = 1.9e-89 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
BLAST of CmaCh09G007000 vs. NCBI nr
Match: XP_022936857.1 (uncharacterized protein LOC111443318 [Cucurbita moschata]) HSP 1 Score: 330.5 bits (846), Expect = 8.9e-87 Identity = 170/175 (97.14%), Postives = 172/175 (98.29%), Query Frame = 0
BLAST of CmaCh09G007000 vs. NCBI nr
Match: KAG6591792.1 (hypothetical protein SDJN03_14138, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024669.1 hypothetical protein SDJN02_13487 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 327.4 bits (838), Expect = 7.5e-86 Identity = 171/175 (97.71%), Postives = 172/175 (98.29%), Query Frame = 0
BLAST of CmaCh09G007000 vs. NCBI nr
Match: XP_023536350.1 (uncharacterized protein LOC111797546 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 323.2 bits (827), Expect = 1.4e-84 Identity = 168/175 (96.00%), Postives = 170/175 (97.14%), Query Frame = 0
BLAST of CmaCh09G007000 vs. NCBI nr
Match: XP_038898299.1 (uncharacterized protein LOC120085999 [Benincasa hispida]) HSP 1 Score: 278.1 bits (710), Expect = 5.2e-71 Identity = 146/177 (82.49%), Postives = 159/177 (89.83%), Query Frame = 0
BLAST of CmaCh09G007000 vs. TAIR 10
Match: AT4G15140.1 (unknown protein; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 99.0 bits (245), Expect = 4.0e-21 Identity = 73/167 (43.71%), Postives = 94/167 (56.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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