CmaCh09G006700 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATTACAATGGCGTAAAACCCTGAACCCTTGACTTTCATAGCTTTGTTCTAGTTGTCTATGTCTCGCTTCAGAGTTCTTCATCGTCGAATTGATTCCCAACTTGGAAGCTATTTCTTCAGTTCACAGTCTACAAATTCCCTCCAATTTCACTCTCTTCCATCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGATGGCGGGATCGGACCAGAAATTGTAGATGTGAAGAGGAATATACGTTCGGATTCTGTGGTTAACCAAGGCGCGAGATCGGGCGGAAGTAGAAATGAGGACAATGTGCTGAAAGGGAGAGTGGATTCTAAGGGGCGAGAGATATTGAAAAGGGAGAACGCTTTGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTATACAGGGAAGGATATTTTAATTATTCGAATTTTTTGCCTGATAACAAACTGGTTCTCAGTTACTTTGAATGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTAGTAGAGACAATCAAGAAATTGCGAAGTAAGAAGAGTTTATGTTGTTAATCTTGTGAATTTTCATCGTCAATGCGTTAATATTGATATCTCTGTTTCGGTTTTTGTGCAATTTTGTTTGAATTTTGTGAGTAGATCATGTGTCTGATGTAGTGGATGGCTCTTAATTTCTTGCCACCAACGATTTCATCTATGAAATATGAAATGCTAAGCAATTCAGAAATATTGTGAGTGGGAGAAGAAACCAAATCTTACGTAATTGGAGACAAGAAATTAGTATTATTAGGAAATTCATGCTTGTAGGTCATTTAATGTCAATTTAGCAAATGGTGATGTGAAACTGCTGAAGCTAAGTCCGATGAATCATGTGTATTTTTTAGCCTGTGCATTGACATGGGGAAGCTATCCTTAGTTCTAGGTTTGAACTTTTTCAAATCATGCTCGTATGCATCTTGTGGCAATCAAGACGAAGAAGAAATCAAGGTGATTTGGTTGGTTTGAGAAGATATTGTGTTCGTGTTTGTTTTTAAAATAAGAAACTGTTATTAGTTTCTGTTAGGGGTCAGATCACTCCAACTATATTTAGTATCATTAATGTAAAAATCTTAGTATGAATCATTCTCAGATGCATTATTTTTTTGGGTAAAATTCTTAGATGTTGGTAGTTAAGGGTAACGAAAGCTATGGAAAATAAGGACGATGGTGGTGAGAGGTTTTCACACCCTTACAAATAAACGCGCATTTGCTAGGGAGAAGTTGTCACACCCTTATAAAGAATATTTCATTCTCTTCCCCAACTGACGTGGGATCTTATAGTGATAATCAAAATTTTGTTTTCTATTATTCAAATATGATAATATTGGCTGCTAGTACTATTCCCAACCATTGTTTTTTGCTGGGTTTGTTGGTTTATAGAGGTTGTTTGGTTGAAATGGTTCAATTTTCAAAATTTATTGTACTCTTGTGTCTCTCCAGTCGGTTCAATGTTGATGTTCATCTACCAAACTGACTATAGTGAAAATTGTGCTGCAGCTGATGTCTGCACTTGTCATTTTGTTTACCTGCTGCTTGATAATTGCTTGAAGCCTTATGCTACTCATAATTTCAAGCTTTTGAAGGAAATAATGTTTTCTATTCCATCTTTCTTGTTCTGGCAGTTGTGTTTCATTATGAAGACATACCCCTATTGTTTCACGTCTTGAACTCTGAGTCTTGGGATTTTCAGATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCTTTATTTGGATGCCCATCCACTGCTAGAAGAGATGTTTTTGCTGCTAAAAGACTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTAAGCAAAGGCTCAGAAATCATTACTTCCCTTCTTCTATTACCATTTAAATATTTGTTATCTTCTCTCTTCAATTTATCCGCAGGTTTGTCACAATTGCACCTTGAGACAGTCATGCAAGTATGTGAATCAAGGTGTTTGGAATTGCGGCACCAAGAATTTAAATTTGGCAGTCGTTATGAAGGTTATTACTCAATACGACTTGCAAGCTATACCAAAACAACTTATAATACCTGAAGACATTAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGAGGAACTAGTTTTGGCCGCAGCATACGTTGATCAACTCCGTCCTATACTAGAAGATCTGGGTTTCTCTCTGGTGGCTGTTGAACCTTCAAGGCATCCAGCTTGTTCATACGCCATGGTGAGTTTGTGAGCAGTAAAGTAAATACTCTGTTTCTTTGATGGACGTGCACGATTTAGAGTGTATCAGCTTGGTTCATTTTGTCACATTGATATAGAAACTGAAAATTCAGTCTAATTATTATATACCTAAACAGTTAGGTTCTAATTCTTACTGTTTTCTCACCTTCAGTAGGGGATGGCGCTACCGCTACAATGTGGCTGCCATATGTACTACAAAAATACTATTGTGTTAGCGGATATTGTCTGTTTTGGCATGTACGTATCGCTATTAGTCTCATGGTTTAGACGTTTCTACACCCTTATAGAGAATGTGTCTTCCACACATTTATAAAGAATGTGTCGATCTGG CATTACAATGGCGTAAAACCCTGAACCCTTGACTTTCATAGCTTTGTTCTAGTTGTCTATGTCTCGCTTCAGAGTTCTTCATCGTCGAATTGATTCCCAACTTGGAAGCTATTTCTTCAGTTCACAGTCTACAAATTCCCTCCAATTTCACTCTCTTCCATCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGATGGCGGGATCGGACCAGAAATTGTAGATGTGAAGAGGAATATACGTTCGGATTCTGTGGTTAACCAAGGCGCGAGATCGGGCGGAAGTAGAAATGAGGACAATGTGCTGAAAGGGAGAGTGGATTCTAAGGGGCGAGAGATATTGAAAAGGGAGAACGCTTTGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTATACAGGGAAGGATATTTTAATTATTCGAATTTTTTGCCTGATAACAAACTGGTTCTCAGTTACTTTGAATGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTAGTAGAGACAATCAAGAAATTGCGAAATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCTTTATTTGGATGCCCATCCACTGCTAGAAGAGATGTTTTTGCTGCTAAAAGACTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTTTGTCACAATTGCACCTTGAGACAGTCATGCAAGTATGTGAATCAAGGTGTTTGGAATTGCGGCACCAAGAATTTAAATTTGGCAGTCGTTATGAAGGTTATTACTCAATACGACTTGCAAGCTATACCAAAACAACTTATAATACCTGAAGACATTAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGAGGAACTAGTTTTGGCCGCAGCATACGTTGATCAACTCCGTCCTATACTAGAAGATCTGGGTTTCTCTCTGGTGGCTGTTGAACCTTCAAGGCATCCAGCTTGTTCATACGCCATGGTGAGTTTGTGAGCAGTAAAGTAAATACTCTGTTTCTTTGATGGACGTGCACGATTTAGAGTGTATCAGCTTGGTTCATTTTGTCACATTGATATAGAAACTGAAAATTCAGTCTAATTATTATATACCTAAACAGTTAGGTTCTAATTCTTACTGTTTTCTCACCTTCAGTAGGGGATGGCGCTACCGCTACAATGTGGCTGCCATATGTACTACAAAAATACTATTGTGTTAGCGGATATTGTCTGTTTTGGCATGTACGTATCGCTATTAGTCTCATGGTTTAGACGTTTCTACACCCTTATAGAGAATGTGTCTTCCACACATTTATAAAGAATGTGTCGATCTGG ATGTCTCGCTTCAGAGTTCTTCATCGTCGAATTGATTCCCAACTTGGAAGCTATTTCTTCAGTTCACAGTCTACAAATTCCCTCCAATTTCACTCTCTTCCATCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGATGGCGGGATCGGACCAGAAATTGTAGATGTGAAGAGGAATATACGTTCGGATTCTGTGGTTAACCAAGGCGCGAGATCGGGCGGAAGTAGAAATGAGGACAATGTGCTGAAAGGGAGAGTGGATTCTAAGGGGCGAGAGATATTGAAAAGGGAGAACGCTTTGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTATACAGGGAAGGATATTTTAATTATTCGAATTTTTTGCCTGATAACAAACTGGTTCTCAGTTACTTTGAATGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTAGTAGAGACAATCAAGAAATTGCGAAATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCTTTATTTGGATGCCCATCCACTGCTAGAAGAGATGTTTTTGCTGCTAAAAGACTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTTTGTCACAATTGCACCTTGAGACAGTCATGCAAGTATGTGAATCAAGGTGTTTGGAATTGCGGCACCAAGAATTTAAATTTGGCAGTCGTTATGAAGGTTATTACTCAATACGACTTGCAAGCTATACCAAAACAACTTATAATACCTGAAGACATTAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGAGGAACTAG MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKRNIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREILKRENALVRKELSPDMEMFVRHLYREGYFNYSNFLPDNKLVLSYFECRHGRDFIKSAAERFSRDNQEIAKWLSGSDLRKVALFGCPSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMKVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN Homology
BLAST of CmaCh09G006700 vs. ExPASy TrEMBL
Match: A0A6J1IGS8 (uncharacterized protein LOC111477088 OS=Cucurbita maxima OX=3661 GN=LOC111477088 PE=4 SV=1) HSP 1 Score: 550.1 bits (1416), Expect = 5.5e-153 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of CmaCh09G006700 vs. ExPASy TrEMBL
Match: A0A6J1F747 (uncharacterized protein LOC111442720 OS=Cucurbita moschata OX=3662 GN=LOC111442720 PE=4 SV=1) HSP 1 Score: 532.3 bits (1370), Expect = 1.2e-147 Identity = 269/278 (96.76%), Postives = 273/278 (98.20%), Query Frame = 0
BLAST of CmaCh09G006700 vs. ExPASy TrEMBL
Match: A0A0A0L4J9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625010 PE=4 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 4.7e-104 Identity = 207/286 (72.38%), Postives = 228/286 (79.72%), Query Frame = 0
BLAST of CmaCh09G006700 vs. ExPASy TrEMBL
Match: A0A5A7VHD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00760 PE=4 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 2.9e-101 Identity = 206/286 (72.03%), Postives = 226/286 (79.02%), Query Frame = 0
BLAST of CmaCh09G006700 vs. ExPASy TrEMBL
Match: A0A6J1CC23 (uncharacterized protein LOC111009818 OS=Momordica charantia OX=3673 GN=LOC111009818 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 1.6e-75 Identity = 165/264 (62.50%), Postives = 185/264 (70.08%), Query Frame = 0
BLAST of CmaCh09G006700 vs. NCBI nr
Match: XP_022976827.1 (uncharacterized protein LOC111477088 [Cucurbita maxima]) HSP 1 Score: 550.1 bits (1416), Expect = 1.1e-152 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of CmaCh09G006700 vs. NCBI nr
Match: KAG6591767.1 (hypothetical protein SDJN03_14113, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 534.6 bits (1376), Expect = 4.9e-148 Identity = 270/278 (97.12%), Postives = 274/278 (98.56%), Query Frame = 0
BLAST of CmaCh09G006700 vs. NCBI nr
Match: KAG7024649.1 (hypothetical protein SDJN02_13467, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 534.6 bits (1376), Expect = 4.9e-148 Identity = 270/278 (97.12%), Postives = 274/278 (98.56%), Query Frame = 0
BLAST of CmaCh09G006700 vs. NCBI nr
Match: XP_022935982.1 (uncharacterized protein LOC111442720 [Cucurbita moschata]) HSP 1 Score: 532.3 bits (1370), Expect = 2.4e-147 Identity = 269/278 (96.76%), Postives = 273/278 (98.20%), Query Frame = 0
BLAST of CmaCh09G006700 vs. NCBI nr
Match: XP_023536478.1 (uncharacterized protein LOC111797643 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 526.9 bits (1356), Expect = 1.0e-145 Identity = 266/278 (95.68%), Postives = 272/278 (97.84%), Query Frame = 0
BLAST of CmaCh09G006700 vs. TAIR 10
Match: AT1G53460.1 (BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 485 Blast hits to 413 proteins in 88 species: Archae - 11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). ) HSP 1 Score: 185.7 bits (470), Expect = 5.2e-47 Identity = 96/195 (49.23%), Postives = 132/195 (67.69%), Query Frame = 0
BLAST of CmaCh09G006700 vs. TAIR 10
Match: AT1G55040.1 (zinc finger (Ran-binding) family protein ) HSP 1 Score: 64.3 bits (155), Expect = 1.8e-10 Identity = 39/129 (30.23%), Postives = 68/129 (52.71%), Query Frame = 0
BLAST of CmaCh09G006700 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein ) HSP 1 Score: 59.3 bits (142), Expect = 5.6e-09 Identity = 50/162 (30.86%), Postives = 83/162 (51.23%), Query Frame = 0
BLAST of CmaCh09G006700 vs. TAIR 10
Match: AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein ) HSP 1 Score: 59.3 bits (142), Expect = 5.6e-09 Identity = 50/162 (30.86%), Postives = 83/162 (51.23%), Query Frame = 0
BLAST of CmaCh09G006700 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein ) HSP 1 Score: 57.4 bits (137), Expect = 2.1e-08 Identity = 34/107 (31.78%), Postives = 53/107 (49.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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