CmaCh09G006610 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh09G006610
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr09: 3136435 .. 3136941 (+)
RNA-Seq ExpressionCmaCh09G006610
SyntenyCmaCh09G006610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCATTCCCAGTATTCAATCTCTTCTGGTTTGCTTCCTCCAATTCCCTTCTCGTCGTCTCTCGCATGGCCGACCATTAAGAACAAACTCAATTTCCATTGCGTCTCCGGCGGAAATTCTCTCCTCATTTTCTTCAACTTCTTCGCCGATTTCTCCATAGATATCTGCTTTCTGCTTTCAAGCTTTTGCATTATTCTCGGACGCATTGTTGCGATACACCCTTCCTTCCACCACTTACTCGGAACTTCTTTTGTTTTCGGTTCGTTCCAATTTCAATCACTGATTTCAAGGGTTATTCTTTGTTAATCCCTCCGTATTGCTTATTTCTTAGGATTTACTTTGGTTTATTTAGTTTTTGAATTTTTTTTGTTTTGTTTTGTTTATGATTATAGATTCTGGAATCGAAGTTTATATGTTATGTACTATGCTCTAGCGTTTTATTATTTGCACTTCTGTTTGTTGTTTTCTCTGATGTTTTGCTCCTCTTTAGGGGTCTTCTTCTGA

mRNA sequence

ATGTTGCATTCCCAGTATTCAATCTCTTCTGGTTTGCTTCCTCCAATTCCCTTCTCGTCGTCTCTCGCATGGCCGACCATTAAGAACAAACTCAATTTCCATTGCGTCTCCGGCGGAAATTCTCTCCTCATTTTCTTCAACTTCTTCGCCGATTTCTCCATAGATATCTGCTTTCTGCTTTCAAGCTTTTGCATTATTCTCGGACGCATTGTTGCGATACACCCTTCCTTCCACCACTTACTCGGAACTTCTTTTGTTTTCGGGGTCTTCTTCTGA

Coding sequence (CDS)

ATGTTGCATTCCCAGTATTCAATCTCTTCTGGTTTGCTTCCTCCAATTCCCTTCTCGTCGTCTCTCGCATGGCCGACCATTAAGAACAAACTCAATTTCCATTGCGTCTCCGGCGGAAATTCTCTCCTCATTTTCTTCAACTTCTTCGCCGATTTCTCCATAGATATCTGCTTTCTGCTTTCAAGCTTTTGCATTATTCTCGGACGCATTGTTGCGATACACCCTTCCTTCCACCACTTACTCGGAACTTCTTTTGTTTTCGGGGTCTTCTTCTGA

Protein sequence

MLHSQYSISSGLLPPIPFSSSLAWPTIKNKLNFHCVSGGNSLLIFFNFFADFSIDICFLLSSFCIILGRIVAIHPSFHHLLGTSFVFGVFF
Homology
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BLAST of CmaCh09G006610 vs. NCBI nr
Match: KAG7024643.1 (hypothetical protein SDJN02_13461, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 72.8 bits (177), Expect = 1.7e-09
Identity = 38/45 (84.44%), Postives = 38/45 (84.44%), Query Frame = 0 

Query: 12 LLPPIPFSSSLAWPTIKNKLNFHCVSGGNSLLIFFNFFADFSIDI 57
          LLPPIPFSSSLAW T KNKLNFHCVSG NSL I FNF ADFSI I
Sbjct: 13 LLPPIPFSSSLAWRT-KNKLNFHCVSGRNSLPILFNFLADFSIHI 56

The following BLAST results are available for this feature:
BLAST of CmaCh09G006610 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh09G006610 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh09G006610 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7024643.11.7e-0984.44hypothetical protein SDJN02_13461, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CmaCh09G006610 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G006610.1CmaCh09G006610.1mRNA