CmaCh09G006550 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh09G006550
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Transcription initiation factor IIE subunit alpha-like
Location	Cma_Chr09: 3118290 .. 3120062 (+)
RNA-Seq Expression	CmaCh09G006550
Synteny	CmaCh09G006550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTAATTAGAGACATTAAAGCGATCCCTTCACCGGATTTATTGGTTTGTTTCCCTTCTCGCTCGCATTTCGCTTTAATGCCAAACCCACTTTGTAGTCCTGTCAGAGCGTCTGATTCGAACAAGCTCCGCCGTTATCACCGGCGGAGGAAGTCGGCGGAGAGCCCGGTGGTTTGGGCCAAAGCGAAGACGATAGGGGGGTCTGAGGTGTCGGAACCGTCGTCGCCGAAAGTGACCTGTGCAGGGCAGATTAAGATGAGGCGGAAGAGCAGGAAGAGCTGGGAATCGGTGATGGAGGAGATAGAGAGAATTCATAATAGGAGGGAATTACGGCGGAGGAGGTTCAATTGGGTCGAATCTTTAGGGTTCAAGAAGGATATAATGCAATTCTTAACGTGTTTACGGAGCATTCGGTTTGATTTTGGGTGTTTCGGAGCTTTCCCTGAAGCAGAGTTCACCTCTGAAGACGAGGAAGAAGAGGAAGTGGGTGTCGAGGGGAGCGATGGCTCCAGAACGGCGTTTTCTAAATGGTTCATGGTTTTACAGGGAAGTGGGGTCCGGAGAGACGGCAACGGTCTCTGTACAGTTGATGATGCATCGATTGGGCCGCCGATGGCGCCGCCCAGAAACGCGCTTTTGCTTATGCGCTGCAGGTCTGCTCCGGCGAAGAGTTGGGTGGAGGAAGCATGTTCAGAGGAGGAAGAAGACACAGAGGTCAAGGTGAAGAAGAGCTTGAAATGGCTAATGGAGGAAGAGAACAGAGAGAGCAGGGATTTGGTTACGAGGAGTCGGAGTTGGAAGGTTTGATCTTACTGGGTAAGGAACTCAGATCATCATGTTAAACTTGGTTCTAAACCTACTAGTTAACTGTTTAAACTTAATAGATATGGTCTGCTCAAAATTTCTAAAATGTGTATGTAAGGGAAAGGTTTCTAATAAGATCTCACAGTCCACCCGTTTAAGGGCCGAGCGTCTTAGCTCGCACTCGTTCCCTTCACCAATCGATATGGGACCTCCCAGTTCACTCCTTTTGGAGGCCCAACATCTTTCGTGGCATGCCGCCTTTAACCTAACCCAAAGCATTCCAAAAGTTGTAATTAGAAGCCGTGTATACTTTATAGACATAATTATCCAATCGAGAATAAGATCTTATGACAAATAATGAATGGTCGATGTCTTGGTTCATATCATATATTTTATAGGACAGATGGATCCTCGAATCCATTTAGTTCACACGGACAAATGTCTCCTCTACTATTTCTCGATTATCTATTAAAAGTGAGTTTATGATATAACATATTTATTTGGTTAGATCCTCACTCGAACCACCAATATTATTTTTGCTATAATTTGAAAATACAATATTAAAAACAAACTCCTTATAGAAAATATCCTCTTGCTATCTTACTCCAACACTCAAAATTATTTTAATTTCAGGTTATTATAATAAATCAAATACCATTTCAAGGCTATTTTTTAAATCAGCCAATTGAAATAAATTATTGGGCAAATTGGTTGTATATTCCACGTCAGCATTATCGTATGAATATTAAAATTAAAAAAAAAATAATCAAGATTAGTAACAACATAAACACAGAGACGGGAGTTTATTAGATTAGAACCAAGGGATGAACAGGGAGGTTTGTAATTATGGCGTGATTAGCGTAGAGCAGCAAAATGGCGCTCAATTCTTCCTTCCGCAGCCTAACCGTTGACACTCTGACCTCTAGAAATCCCAATTCGATTCCACTTTCTTCCTTAACCCTATAA

mRNA sequence

ATGAAATTAATTAGAGACATTAAAGCGATCCCTTCACCGGATTTATTGGTTTGTTTCCCTTCTCGCTCGCATTTCGCTTTAATGCCAAACCCACTTTGTAGTCCTGTCAGAGCGTCTGATTCGAACAAGCTCCGCCGTTATCACCGGCGGAGGAAGTCGGCGGAGAGCCCGGTGGTTTGGGCCAAAGCGAAGACGATAGGGGGGTCTGAGGTGTCGGAACCGTCGTCGCCGAAAGTGACCTGTGCAGGGCAGATTAAGATGAGGCGGAAGAGCAGGAAGAGCTGGGAATCGGTGATGGAGGAGATAGAGAGAATTCATAATAGGAGGGAATTACGGCGGAGGAGGTTCAATTGGGTCGAATCTTTAGGGTTCAAGAAGGATATAATGCAATTCTTAACGTGTTTACGGAGCATTCGGTTTGATTTTGGGTGTTTCGGAGCTTTCCCTGAAGCAGAGTTCACCTCTGAAGACGAGGAAGAAGAGGAAGTGGGTGTCGAGGGGAGCGATGGCTCCAGAACGGCGTTTTCTAAATGGTTCATGGTTTTACAGGGAAGTGGGGTCCGGAGAGACGGCAACGGTCTCTGTACAGTTGATGATGCATCGATTGGGCCGCCGATGGCGCCGCCCAGAAACGCGCTTTTGCTTATGCGCTGCAGGTCTGCTCCGGCGAAGAGTTGGGTGGAGGAAGCATGTTCAGAGGAGGAAGAAGACACAGAGGTCAAGGTGAAGAAGAGCTTGAAATGGCTAATGGAGGAAGAGAACAGAGAGAGCAGGGATTTGGTTACGAGGAGTCGGAGTTGGAAGAGCAGCAAAATGGCGCTCAATTCTTCCTTCCGCAGCCTAACCGTTGACACTCTGACCTCTAGAAATCCCAATTCGATTCCACTTTCTTCCTTAACCCTATAA

Coding sequence (CDS)

ATGAAATTAATTAGAGACATTAAAGCGATCCCTTCACCGGATTTATTGGTTTGTTTCCCTTCTCGCTCGCATTTCGCTTTAATGCCAAACCCACTTTGTAGTCCTGTCAGAGCGTCTGATTCGAACAAGCTCCGCCGTTATCACCGGCGGAGGAAGTCGGCGGAGAGCCCGGTGGTTTGGGCCAAAGCGAAGACGATAGGGGGGTCTGAGGTGTCGGAACCGTCGTCGCCGAAAGTGACCTGTGCAGGGCAGATTAAGATGAGGCGGAAGAGCAGGAAGAGCTGGGAATCGGTGATGGAGGAGATAGAGAGAATTCATAATAGGAGGGAATTACGGCGGAGGAGGTTCAATTGGGTCGAATCTTTAGGGTTCAAGAAGGATATAATGCAATTCTTAACGTGTTTACGGAGCATTCGGTTTGATTTTGGGTGTTTCGGAGCTTTCCCTGAAGCAGAGTTCACCTCTGAAGACGAGGAAGAAGAGGAAGTGGGTGTCGAGGGGAGCGATGGCTCCAGAACGGCGTTTTCTAAATGGTTCATGGTTTTACAGGGAAGTGGGGTCCGGAGAGACGGCAACGGTCTCTGTACAGTTGATGATGCATCGATTGGGCCGCCGATGGCGCCGCCCAGAAACGCGCTTTTGCTTATGCGCTGCAGGTCTGCTCCGGCGAAGAGTTGGGTGGAGGAAGCATGTTCAGAGGAGGAAGAAGACACAGAGGTCAAGGTGAAGAAGAGCTTGAAATGGCTAATGGAGGAAGAGAACAGAGAGAGCAGGGATTTGGTTACGAGGAGTCGGAGTTGGAAGAGCAGCAAAATGGCGCTCAATTCTTCCTTCCGCAGCCTAACCGTTGACACTCTGACCTCTAGAAATCCCAATTCGATTCCACTTTCTTCCTTAACCCTATAA

Protein sequence

MKLIRDIKAIPSPDLLVCFPSRSHFALMPNPLCSPVRASDSNKLRRYHRRRKSAESPVVWAKAKTIGGSEVSEPSSPKVTCAGQIKMRRKSRKSWESVMEEIERIHNRRELRRRRFNWVESLGFKKDIMQFLTCLRSIRFDFGCFGAFPEAEFTSEDEEEEEVGVEGSDGSRTAFSKWFMVLQGSGVRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPAKSWVEEACSEEEEDTEVKVKKSLKWLMEEENRESRDLVTRSRSWKSSKMALNSSFRSLTVDTLTSRNPNSIPLSSLTL

Homology

[Close]

BLAST of CmaCh09G006550 vs. ExPASy TrEMBL
Match: A0A6J1IQQ3 (uncharacterized protein LOC111477333 OS=Cucurbita maxima OX=3661 GN=LOC111477333 PE=4 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 2.6e-148
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MKLIRDIKAIPSPDLLVCFPSRSHFALMPNPLCSPVRASDSNKLRRYHRRRKSAESPVVW 60
           MKLIRDIKAIPSPDLLVCFPSRSHFALMPNPLCSPVRASDSNKLRRYHRRRKSAESPVVW
Sbjct: 1   MKLIRDIKAIPSPDLLVCFPSRSHFALMPNPLCSPVRASDSNKLRRYHRRRKSAESPVVW 60

Query: 61  AKAKTIGGSEVSEPSSPKVTCAGQIKMRRKSRKSWESVMEEIERIHNRRELRRRRFNWVE 120
           AKAKTIGGSEVSEPSSPKVTCAGQIKMRRKSRKSWESVMEEIERIHNRRELRRRRFNWVE
Sbjct: 61  AKAKTIGGSEVSEPSSPKVTCAGQIKMRRKSRKSWESVMEEIERIHNRRELRRRRFNWVE 120

Query: 121 SLGFKKDIMQFLTCLRSIRFDFGCFGAFPEAEFTSEDEEEEEVGVEGSDGSRTAFSKWFM 180
           SLGFKKDIMQFLTCLRSIRFDFGCFGAFPEAEFTSEDEEEEEVGVEGSDGSRTAFSKWFM
Sbjct: 121 SLGFKKDIMQFLTCLRSIRFDFGCFGAFPEAEFTSEDEEEEEVGVEGSDGSRTAFSKWFM 180

Query: 181 VLQGSGVRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPAKSWVEEACSEEEEDTEV 240
           VLQGSGVRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPAKSWVEEACSEEEEDTEV
Sbjct: 181 VLQGSGVRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPAKSWVEEACSEEEEDTEV 240

Query: 241 KVKKSLKWLMEEENRESRDLVTRSRSWK 269
           KVKKSLKWLMEEENRESRDLVTRSRSWK
Sbjct: 241 KVKKSLKWLMEEENRESRDLVTRSRSWK 268

[Close]

BLAST of CmaCh09G006550 vs. ExPASy TrEMBL
Match: A0A6J1FBW7 (uncharacterized protein LOC111442647 OS=Cucurbita moschata OX=3662 GN=LOC111442647 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 3.6e-142
Identity = 257/268 (95.90%), Postives = 261/268 (97.39%), Query Frame = 0


Query: 1   MKLIRDIKAIPSPDLLVCFPSRSHFALMPNPLCSPVRASDSNKLRRYHRRRKSAESPVVW 60
           MK IRD KA PSPDLLVCFPSRSHFALMPNPLCSP RASDSNKLRRYHRRRKSAESPVVW
Sbjct: 1   MKSIRDTKANPSPDLLVCFPSRSHFALMPNPLCSPARASDSNKLRRYHRRRKSAESPVVW 60

Query: 61  AKAKTIGGSEVSEPSSPKVTCAGQIKMRRKSRKSWESVMEEIERIHNRRELRRRRFNWVE 120
           AKAKT+GGSEVSEPSSPKVTCAGQIKMR KSRKSWESVMEEIERIHNRRELRRRRFNWVE
Sbjct: 61  AKAKTMGGSEVSEPSSPKVTCAGQIKMRPKSRKSWESVMEEIERIHNRRELRRRRFNWVE 120

Query: 121 SLGFKKDIMQFLTCLRSIRFDFGCFGAFPEAEFTSEDEEEEEVGVEGSDGSRTAFSKWFM 180
           SLGFKKDIMQFLTCLRS+RFDFGCFGAFPEAEFTSEDEEEEEVGVEGSDGSRTAFSKWFM
Sbjct: 121 SLGFKKDIMQFLTCLRSLRFDFGCFGAFPEAEFTSEDEEEEEVGVEGSDGSRTAFSKWFM 180

Query: 181 VLQGSGVRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPAKSWVEEACSEEEEDTEV 240
           VLQGSGVRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPAKSWVEE CSEE E+TEV
Sbjct: 181 VLQGSGVRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPAKSWVEEGCSEEGEETEV 240

Query: 241 KVKKSLKWLMEEENRESRDLVTRSRSWK 269
           KVKKSLKWLMEEENRESRDLVTRS+SWK
Sbjct: 241 KVKKSLKWLMEEENRESRDLVTRSQSWK 268

[Close]

BLAST of CmaCh09G006550 vs. ExPASy TrEMBL
Match: A0A0A0L1Z4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G377750 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.9e-98
Identity = 204/310 (65.81%), Postives = 232/310 (74.84%), Query Frame = 0


Query: 1   MKLIRD-IKAIPSPDLLVCFPSRSHFALMPNPLCSPVRASDSNKL----RRYHRRRKSAE 60
           MKL R+  K IPS DLLVCFPSRSH ALMPNPLCSP R SDS+K     RRYHRRRKSAE
Sbjct: 1   MKLNREKSKGIPSSDLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDYRRYHRRRKSAE 60

Query: 61  SPVVWAKAKTIGGSEVSEPSSPKVTCAGQIKMRRKSRKSWESVMEEIERIHNRRELRRRR 120
           SPVVWAKAKT+ GSE+SEPSSPKVTCAGQIK+R K+ KSW+SVMEEIERIHNRR+LRRRR
Sbjct: 61  SPVVWAKAKTM-GSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRR 120

Query: 121 FNWVESLGFKKDIMQFLTCLRSIRFDFGCFGAFPEAEFTSEDEEEEE-----------VG 180
           FNW+ES GFKKDIMQFLTCLR++RFDF CF AFPE +FT+E+EEEEE           VG
Sbjct: 121 FNWIESFGFKKDIMQFLTCLRTMRFDFRCFRAFPETDFTTEEEEEEEEEEEEEEEKNQVG 180

Query: 181 VEGSDGSRTAFSKWFMVLQGSG---VRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSA 240
           +E ++ SRTAFSKWFMVLQ +G   ++RD N  C  DD SI   MAPPRNALLLMRC+SA
Sbjct: 181 IEENESSRTAFSKWFMVLQENGSNELKRDSNSRCYEDDESIEATMAPPRNALLLMRCKSA 240

Query: 241 PAKSWVEEACSEEEEDTE-------VKVKKSLKWLMEEENRE----------------SR 269
           PA+ W+EE   EE+++ E       VKVKKSLKWLMEEENRE                + 
Sbjct: 241 PARRWMEEESEEEDDEKEKEKEKEKVKVKKSLKWLMEEENRERVVMEMGTDFCRMISDNA 300

[Close]

BLAST of CmaCh09G006550 vs. ExPASy TrEMBL
Match: A0A5D3D503 (Transcription initiation factor IIE subunit alpha-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001490 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.7e-97
Identity = 203/302 (67.22%), Postives = 229/302 (75.83%), Query Frame = 0


Query: 1   MKLIRD-IKAIPSPDLLVCFPSRSHFALMPNPLCSPVRASDSNKL----RRYHRRRKSAE 60
           MKL R+  K IPS DLLVCFPSRSH ALMPNPLCSP R SDS+K     RR+HRRRKSAE
Sbjct: 8   MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKSAE 67

Query: 61  SPVVWAKAKTIGGSEVSEPSSPKVTCAGQIKMRRKSRKSWESVMEEIERIHNRRELRRRR 120
           SPVVWAKAKT+ GSE+SEPSSPKVTCAGQIK+R K+ KSW+SVMEEIERIHNRR+LRRRR
Sbjct: 68  SPVVWAKAKTM-GSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRR 127

Query: 121 FNWVESLGFKKDIMQFLTCLRSIRFDFGCFGAFPEAEFTSEDEEEEE---------VGVE 180
           F WVES GFKKDIMQFLTCLR+IRFDF CF AFPE +FT+E+EEEEE         VG+E
Sbjct: 128 FRWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDEKNQVGIE 187

Query: 181 GSDGSRTAFSKWFMVLQGSG---VRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPA 240
            ++ SRTAFSKWFMVLQ +G   ++RD   LC  DD SI   MAPP NALLLMRCRSAPA
Sbjct: 188 ENESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAPA 247

Query: 241 KSWVEEACSE-EEEDTEVKVKKSLKWLMEEENRE----------------SRDLVTRSRS 269
           + W+EE   E ++E  +VKVKKSLKWLMEEENRE                +    TRS+S
Sbjct: 248 RRWMEEESEEGDDEKEKVKVKKSLKWLMEEENRERLVVEMGTDFCRMTSDNAKEFTRSQS 307

[Close]

BLAST of CmaCh09G006550 vs. ExPASy TrEMBL
Match: A0A1S3B949 (uncharacterized protein LOC103487551 OS=Cucumis melo OX=3656 GN=LOC103487551 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.7e-97
Identity = 203/302 (67.22%), Postives = 229/302 (75.83%), Query Frame = 0


Query: 1   MKLIRD-IKAIPSPDLLVCFPSRSHFALMPNPLCSPVRASDSNKL----RRYHRRRKSAE 60
           MKL R+  K IPS DLLVCFPSRSH ALMPNPLCSP R SDS+K     RR+HRRRKSAE
Sbjct: 8   MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKSAE 67

Query: 61  SPVVWAKAKTIGGSEVSEPSSPKVTCAGQIKMRRKSRKSWESVMEEIERIHNRRELRRRR 120
           SPVVWAKAKT+ GSE+SEPSSPKVTCAGQIK+R K+ KSW+SVMEEIERIHNRR+LRRRR
Sbjct: 68  SPVVWAKAKTM-GSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRR 127

Query: 121 FNWVESLGFKKDIMQFLTCLRSIRFDFGCFGAFPEAEFTSEDEEEEE---------VGVE 180
           F WVES GFKKDIMQFLTCLR+IRFDF CF AFPE +FT+E+EEEEE         VG+E
Sbjct: 128 FRWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDEKNQVGIE 187

Query: 181 GSDGSRTAFSKWFMVLQGSG---VRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPA 240
            ++ SRTAFSKWFMVLQ +G   ++RD   LC  DD SI   MAPP NALLLMRCRSAPA
Sbjct: 188 ENESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAPA 247

Query: 241 KSWVEEACSE-EEEDTEVKVKKSLKWLMEEENRE----------------SRDLVTRSRS 269
           + W+EE   E ++E  +VKVKKSLKWLMEEENRE                +    TRS+S
Sbjct: 248 RRWMEEESEEGDDEKEKVKVKKSLKWLMEEENRERLVVEMGTDFCRMTSDNAKEFTRSQS 307

[Close]

BLAST of CmaCh09G006550 vs. NCBI nr
Match: XP_022977179.1 (uncharacterized protein LOC111477333 [Cucurbita maxima])

HSP 1 Score: 534.6 bits (1376), Expect = 5.3e-148
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MKLIRDIKAIPSPDLLVCFPSRSHFALMPNPLCSPVRASDSNKLRRYHRRRKSAESPVVW 60
           MKLIRDIKAIPSPDLLVCFPSRSHFALMPNPLCSPVRASDSNKLRRYHRRRKSAESPVVW
Sbjct: 1   MKLIRDIKAIPSPDLLVCFPSRSHFALMPNPLCSPVRASDSNKLRRYHRRRKSAESPVVW 60

Query: 61  AKAKTIGGSEVSEPSSPKVTCAGQIKMRRKSRKSWESVMEEIERIHNRRELRRRRFNWVE 120
           AKAKTIGGSEVSEPSSPKVTCAGQIKMRRKSRKSWESVMEEIERIHNRRELRRRRFNWVE
Sbjct: 61  AKAKTIGGSEVSEPSSPKVTCAGQIKMRRKSRKSWESVMEEIERIHNRRELRRRRFNWVE 120

Query: 121 SLGFKKDIMQFLTCLRSIRFDFGCFGAFPEAEFTSEDEEEEEVGVEGSDGSRTAFSKWFM 180
           SLGFKKDIMQFLTCLRSIRFDFGCFGAFPEAEFTSEDEEEEEVGVEGSDGSRTAFSKWFM
Sbjct: 121 SLGFKKDIMQFLTCLRSIRFDFGCFGAFPEAEFTSEDEEEEEVGVEGSDGSRTAFSKWFM 180

Query: 181 VLQGSGVRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPAKSWVEEACSEEEEDTEV 240
           VLQGSGVRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPAKSWVEEACSEEEEDTEV
Sbjct: 181 VLQGSGVRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPAKSWVEEACSEEEEDTEV 240

Query: 241 KVKKSLKWLMEEENRESRDLVTRSRSWK 269
           KVKKSLKWLMEEENRESRDLVTRSRSWK
Sbjct: 241 KVKKSLKWLMEEENRESRDLVTRSRSWK 268

[Close]

BLAST of CmaCh09G006550 vs. NCBI nr
Match: XP_022935869.1 (uncharacterized protein LOC111442647 [Cucurbita moschata] >XP_022935870.1 uncharacterized protein LOC111442647 [Cucurbita moschata])

HSP 1 Score: 514.2 bits (1323), Expect = 7.5e-142
Identity = 257/268 (95.90%), Postives = 261/268 (97.39%), Query Frame = 0


Query: 1   MKLIRDIKAIPSPDLLVCFPSRSHFALMPNPLCSPVRASDSNKLRRYHRRRKSAESPVVW 60
           MK IRD KA PSPDLLVCFPSRSHFALMPNPLCSP RASDSNKLRRYHRRRKSAESPVVW
Sbjct: 1   MKSIRDTKANPSPDLLVCFPSRSHFALMPNPLCSPARASDSNKLRRYHRRRKSAESPVVW 60

Query: 61  AKAKTIGGSEVSEPSSPKVTCAGQIKMRRKSRKSWESVMEEIERIHNRRELRRRRFNWVE 120
           AKAKT+GGSEVSEPSSPKVTCAGQIKMR KSRKSWESVMEEIERIHNRRELRRRRFNWVE
Sbjct: 61  AKAKTMGGSEVSEPSSPKVTCAGQIKMRPKSRKSWESVMEEIERIHNRRELRRRRFNWVE 120

Query: 121 SLGFKKDIMQFLTCLRSIRFDFGCFGAFPEAEFTSEDEEEEEVGVEGSDGSRTAFSKWFM 180
           SLGFKKDIMQFLTCLRS+RFDFGCFGAFPEAEFTSEDEEEEEVGVEGSDGSRTAFSKWFM
Sbjct: 121 SLGFKKDIMQFLTCLRSLRFDFGCFGAFPEAEFTSEDEEEEEVGVEGSDGSRTAFSKWFM 180

Query: 181 VLQGSGVRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPAKSWVEEACSEEEEDTEV 240
           VLQGSGVRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPAKSWVEE CSEE E+TEV
Sbjct: 181 VLQGSGVRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPAKSWVEEGCSEEGEETEV 240

Query: 241 KVKKSLKWLMEEENRESRDLVTRSRSWK 269
           KVKKSLKWLMEEENRESRDLVTRS+SWK
Sbjct: 241 KVKKSLKWLMEEENRESRDLVTRSQSWK 268

[Close]

BLAST of CmaCh09G006550 vs. NCBI nr
Match: XP_023535963.1 (uncharacterized protein LOC111797241 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023535964.1 uncharacterized protein LOC111797241 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 511.9 bits (1317), Expect = 3.7e-141
Identity = 255/268 (95.15%), Postives = 261/268 (97.39%), Query Frame = 0


Query: 1   MKLIRDIKAIPSPDLLVCFPSRSHFALMPNPLCSPVRASDSNKLRRYHRRRKSAESPVVW 60
           MKLIRD KA PSPDLLVCFPSRSHFALMPNPLCSP RASDSNKLRRYHRRR+SAESPVVW
Sbjct: 1   MKLIRDTKANPSPDLLVCFPSRSHFALMPNPLCSPARASDSNKLRRYHRRRRSAESPVVW 60

Query: 61  AKAKTIGGSEVSEPSSPKVTCAGQIKMRRKSRKSWESVMEEIERIHNRRELRRRRFNWVE 120
           AKAKT+GGSEVSEPSSPKVTCAGQIKMR KSRKSWESVMEEIERIHNRRELRRRRFNWVE
Sbjct: 61  AKAKTMGGSEVSEPSSPKVTCAGQIKMRPKSRKSWESVMEEIERIHNRRELRRRRFNWVE 120

Query: 121 SLGFKKDIMQFLTCLRSIRFDFGCFGAFPEAEFTSEDEEEEEVGVEGSDGSRTAFSKWFM 180
           SLGFKKDIMQFLTCLRS+RFDFGCFGAFPEAEFTSEDEEEE+V VEGSDGSRTAFSKWFM
Sbjct: 121 SLGFKKDIMQFLTCLRSLRFDFGCFGAFPEAEFTSEDEEEEDVAVEGSDGSRTAFSKWFM 180

Query: 181 VLQGSGVRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPAKSWVEEACSEEEEDTEV 240
           VLQGSGVRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPAKSWVEE CSEEEE+TEV
Sbjct: 181 VLQGSGVRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPAKSWVEEGCSEEEEETEV 240

Query: 241 KVKKSLKWLMEEENRESRDLVTRSRSWK 269
           KVKKSLKWLMEEENRESR LVTRS+SWK
Sbjct: 241 KVKKSLKWLMEEENRESRGLVTRSQSWK 268

[Close]

BLAST of CmaCh09G006550 vs. NCBI nr
Match: XP_023535965.1 (uncharacterized protein LOC111797241 isoform X3 [Cucurbita pepo subsp. pepo] >XP_023535966.1 uncharacterized protein LOC111797241 isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 510.8 bits (1314), Expect = 8.2e-141
Identity = 254/268 (94.78%), Postives = 261/268 (97.39%), Query Frame = 0


Query: 1   MKLIRDIKAIPSPDLLVCFPSRSHFALMPNPLCSPVRASDSNKLRRYHRRRKSAESPVVW 60
           MKLIRD KA PSPDLLVCFPSRSHFALMPNPLCSP RASDSNKLRRYHRRR+SAESPVVW
Sbjct: 1   MKLIRDTKANPSPDLLVCFPSRSHFALMPNPLCSPARASDSNKLRRYHRRRRSAESPVVW 60

Query: 61  AKAKTIGGSEVSEPSSPKVTCAGQIKMRRKSRKSWESVMEEIERIHNRRELRRRRFNWVE 120
           AKAKT+GGSEVSEPSSPKVTCAGQIKMR KSRKSWESVMEEIERIHNRRELRRRRFNWVE
Sbjct: 61  AKAKTMGGSEVSEPSSPKVTCAGQIKMRPKSRKSWESVMEEIERIHNRRELRRRRFNWVE 120

Query: 121 SLGFKKDIMQFLTCLRSIRFDFGCFGAFPEAEFTSEDEEEEEVGVEGSDGSRTAFSKWFM 180
           SLGFKKDIMQFLTCLRS+RFDFGCFGAFPEAEFTSEDEEEE+V V+GSDGSRTAFSKWFM
Sbjct: 121 SLGFKKDIMQFLTCLRSLRFDFGCFGAFPEAEFTSEDEEEEDVAVQGSDGSRTAFSKWFM 180

Query: 181 VLQGSGVRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPAKSWVEEACSEEEEDTEV 240
           VLQGSGVRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPAKSWVEE CSEEEE+TEV
Sbjct: 181 VLQGSGVRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPAKSWVEEGCSEEEEETEV 240

Query: 241 KVKKSLKWLMEEENRESRDLVTRSRSWK 269
           KVKKSLKWLMEEENRESR LVTRS+SWK
Sbjct: 241 KVKKSLKWLMEEENRESRGLVTRSQSWK 268

[Close]

BLAST of CmaCh09G006550 vs. NCBI nr
Match: KAG6591755.1 (hypothetical protein SDJN03_14101, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 466.8 bits (1200), Expect = 1.4e-127
Identity = 233/241 (96.68%), Postives = 237/241 (98.34%), Query Frame = 0


Query: 28  MPNPLCSPVRASDSNKLRRYHRRRKSAESPVVWAKAKTIGGSEVSEPSSPKVTCAGQIKM 87
           MPNPLCSP RASDSNKLRRYHRRRKSAESPVVWAKAKT+GGSEVSEPSSPKVTCAGQIKM
Sbjct: 1   MPNPLCSPARASDSNKLRRYHRRRKSAESPVVWAKAKTMGGSEVSEPSSPKVTCAGQIKM 60

Query: 88  RRKSRKSWESVMEEIERIHNRRELRRRRFNWVESLGFKKDIMQFLTCLRSIRFDFGCFGA 147
           R KSRKSWESVMEEIERIHNRRELRRRRFNWVESLGFKKDIMQFLTCLRS+RFDFGCFGA
Sbjct: 61  RPKSRKSWESVMEEIERIHNRRELRRRRFNWVESLGFKKDIMQFLTCLRSLRFDFGCFGA 120

Query: 148 FPEAEFTSEDEEEEEVGVEGSDGSRTAFSKWFMVLQGSGVRRDGNGLCTVDDASIGPPMA 207
           FPEAEFTSEDEEEEEVGVEGSDGSRTAFSKWFMVLQGSGVRRD NGLCTVDDASIGPPMA
Sbjct: 121 FPEAEFTSEDEEEEEVGVEGSDGSRTAFSKWFMVLQGSGVRRDRNGLCTVDDASIGPPMA 180

Query: 208 PPRNALLLMRCRSAPAKSWVEEACSEEEEDTEVKVKKSLKWLMEEENRESRDLVTRSRSW 267
           PPRNALLLMRCRSAPAKSWVEE CSEEEE+TEVKVKKSLKWLMEEENRESRDLVTRS+SW
Sbjct: 181 PPRNALLLMRCRSAPAKSWVEEGCSEEEEETEVKVKKSLKWLMEEENRESRDLVTRSQSW 240

Query: 268 K 269
           K
Sbjct: 241 K 241

[Close]

BLAST of CmaCh09G006550 vs. TAIR 10
Match: AT1G78110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22230.1); Has 5452 Blast hits to 3541 proteins in 289 species: Archae - 4; Bacteria - 165; Metazoa - 1756; Fungi - 532; Plants - 205; Viruses - 141; Other Eukaryotes - 2649 (source: NCBI BLink). )

HSP 1 Score: 220.3 bits (560), Expect = 2.1e-57
Identity = 147/334 (44.01%), Postives = 187/334 (55.99%), Query Frame = 0


Query: 12  SPDLLVCFPSRSHFALMPNPLCSPVRASDSNKLRRYHRRRKSAE----------SPVVWA 71
           S DLLVCFPSR+H AL P P+CSP R SDS+  RR H RR+ ++          SPV+WA
Sbjct: 17  SADLLVCFPSRTHLALTPKPICSPSRPSDSSTNRRPHHRRQLSKLSGGGGGGHGSPVLWA 76

Query: 72  K---AKTIGGSEVSEPSSPKVTCAGQIKMRRKS----RKSWESVMEEIERIHNRRELRRR 131
           K   +K +GG E++EP+SPKVTCAGQIK+R        K+W+SVMEEIERIH+ R   + 
Sbjct: 77  KQASSKNMGGDEIAEPTSPKVTCAGQIKVRPSKCGGRGKNWQSVMEEIERIHDNRSQSK- 136

Query: 132 RFNWVESLGFKKDIMQFLTCLRSIRFDFGCFGAFPEAEFTSEDEEEEE---------VGV 191
                   G KKD+M FLTCLR+I+FDF CFG F  A+ TS+D+EEE+         V  
Sbjct: 137 ------FFGLKKDVMGFLTCLRNIKFDFRCFGDFRHADVTSDDDEEEDDDDDEEEEVVEG 196

Query: 192 EGSDGSRTAFSKWFMVLQGSGVRRD---GNGLC----TVDDASIGPPMAPPRNALLLMRC 251
           E  + S+T FSKWFMVLQ     +D    N  C     ++D    P + PP NALLLMRC
Sbjct: 197 EEEENSKTVFSKWFMVLQEEQNNKDDDKNNNKCDEKRDLEDTETEPAVPPP-NALLLMRC 256

Query: 252 RSAPAKSWVEEAC----------------SEEEEDTEVKV-KKSLKWLMEEENRE----- 270
           RSAPAKSW+EE                    E+++T +K  KK L+ LMEEE  E     
Sbjct: 257 RSAPAKSWLEERMKVKTEQEKREEQKEEKETEDQETSMKTKKKDLRSLMEEEKMELVLMR 316

[Close]

BLAST of CmaCh09G006550 vs. TAIR 10
Match: AT1G22230.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78110.1); Has 2358 Blast hits to 1759 proteins in 159 species: Archae - 2; Bacteria - 36; Metazoa - 1046; Fungi - 203; Plants - 157; Viruses - 72; Other Eukaryotes - 842 (source: NCBI BLink). )

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-39
Identity = 116/278 (41.73%), Postives = 151/278 (54.32%), Query Frame = 0


Query: 12  SPDLLVCFPSRSHFALMPNPLCSPVRASDSNKLRRYHRRRKSAESPVVWAKAKTIGGSE- 71
           S DL+VCFPSR+H +L    + SP  + +  +   +HRR  S  S       +  GG   
Sbjct: 13  SADLMVCFPSRAHLSLPSKSISSPSSSFNRRQNAPHHRRSISKLSSSGGGVRQNRGGGRE 72

Query: 72  -VSEPSSPKVTCAGQIKMRRKSR----KSWESVMEEIERIHNRRELRRRRFNWVESLGFK 131
            V EP+SPKVTCAGQIK+R   R    K+W+S+M EIE+IH  R     +F      G K
Sbjct: 73  VVEEPTSPKVTCAGQIKVRSSKRDGGGKNWQSLMAEIEKIH--RSKSESKF-----FGIK 132

Query: 132 KDIMQFLTCLRSIRFDFGCFGAFPEAEFTSEDEEEEEVGVE------GSDGSRTAFSKWF 191
           +D+M FLTCLR   FDF CFGAFP  +  S+DEEE+E   E        + S T FSKW 
Sbjct: 133 RDVMGFLTCLRD--FDFRCFGAFPPVDIISDDEEEDEEEEEEDEEEDEDESSGTVFSKWL 192

Query: 192 MVLQGSGVRRDGNGLCTVDDASIGPPM---APPRNALLLMRCRSAPAKSWVEEACSEEEE 251
           MVL      +  N  C     ++   +    PP NALLLMRCRSAP K+W EE   EE E
Sbjct: 193 MVLH----EKQNNEECVDGKENVFSDVETAVPPPNALLLMRCRSAPVKNWSEEK-KEETE 252

Query: 252 DTEVKVKKSLKWLMEEENRESRDLVTRSRSWKSSKMAL 275
           + + +VK+S +   EE++R       RS   +  KM L
Sbjct: 253 EGDNRVKQSGEEEEEEKDRVGNKKDLRSLMEEEKKMNL 276

[Close]

BLAST of CmaCh09G006550 vs. TAIR 10
Match: AT2G37100.1 (protamine P1 family protein )

HSP 1 Score: 46.6 bits (109), Expect = 4.1e-05
Identity = 66/282 (23.40%), Postives = 108/282 (38.30%), Query Frame = 0


Query: 31  PLCSPVRASDSNKLRRY------HRRRKSAESPVVWAKAKTIGGSEVSEPSSPKVTCAGQ 90
           P+ SP R  +   L R+       R R  +  P+ + +      +E  EP+SPKVTC GQ
Sbjct: 8   PVSSPGRTENPPLLMRFLRTKSRSRSRSRSRRPIFFRRKNASAAAETQEPTSPKVTCMGQ 67

Query: 91  IKMRRKSRKSWESVMEEIERIHNRRELRRRRFNWVESLGFKKDIMQFL--TCLRSIRFDF 150
           +++ R  +   E+          RR+   RR  WV++          +  TC   +   +
Sbjct: 68  VRINRSKKPKPETARVSGGATERRRQ--SRRCGWVKNAFPCHSFTGIIKPTCFSPV---W 127

Query: 151 GCFGAFPEAEFTSEDEEEEEVGVEGSDGSRTAFSKWFMVLQGSGVRRDGNGLCTVDDASI 210
             + +F  A F+ + E+        S  S   F +  +  +     R          +  
Sbjct: 128 RKWKSFSHASFSKKSEKR-----SSSSRSEPIFGRSTVEPEEPEETRKEENQEEEASSCK 187

Query: 211 GPPMAPPRNALLLMRCRSAPAKS-WVEEACSEEEEDT------------EVKVKKSLKWL 270
                PPRNA LL RCRSAP +S     +  E++E+T             V V +  K  
Sbjct: 188 SFTATPPRNAFLLTRCRSAPYRSPSSANSLFEDQEETNKAPFQRHASSENVSVSEEPKTS 247

Query: 271 MEEENRESRDLVTRSRSWKSSKMALNSSFRSLTVDTLTSRNP 292
           + E      D    S + +  K ++  S R   + T  +  P
Sbjct: 248 VTETTERLEDSRRESAASEEPKRSVLGSPRQCLILTRCNSEP 279

The following BLAST results are available for this feature:

BLAST of CmaCh09G006550 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh09G006550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IQQ3	2.6e-148	100.00	uncharacterized protein LOC111477333 OS=Cucurbita maxima OX=3661 GN=LOC111477333...	[more]
A0A6J1FBW7	3.6e-142	95.90	uncharacterized protein LOC111442647 OS=Cucurbita moschata OX=3662 GN=LOC1114426...	[more]
A0A0A0L1Z4	1.9e-98	65.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G377750 PE=4 SV=1	[more]
A0A5D3D503	2.7e-97	67.22	Transcription initiation factor IIE subunit alpha-like OS=Cucumis melo var. maku...	[more]
A0A1S3B949	2.7e-97	67.22	uncharacterized protein LOC103487551 OS=Cucumis melo OX=3656 GN=LOC103487551 PE=...	[more]

BLAST of CmaCh09G006550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977179.1	5.3e-148	100.00	uncharacterized protein LOC111477333 [Cucurbita maxima]	[more]
XP_022935869.1	7.5e-142	95.90	uncharacterized protein LOC111442647 [Cucurbita moschata] >XP_022935870.1 unchar...	[more]
XP_023535963.1	3.7e-141	95.15	uncharacterized protein LOC111797241 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_023535965.1	8.2e-141	94.78	uncharacterized protein LOC111797241 isoform X3 [Cucurbita pepo subsp. pepo] >XP...	[more]
KAG6591755.1	1.4e-127	96.68	hypothetical protein SDJN03_14101, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmaCh09G006550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78110.1	2.1e-57	44.01	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G22230.1	1.1e-39	41.73	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]
AT2G37100.1	4.1e-05	23.40	protamine P1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33448	CHLOROPLAST PROTEIN HCF243-RELATED	coord: 7..258
None	No IPR available	PANTHER	PTHR33448:SF3	OS09G0370000 PROTEIN	coord: 7..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G006550.1	CmaCh09G006550.1	mRNA