CmaCh09G006030 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh09G006030
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr09: 2823459 .. 2824097 (+)
RNA-Seq ExpressionCmaCh09G006030
SyntenyCmaCh09G006030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAGCACCTTCTGAGTGTAAAATAAATACAAAGTGCATACACATTTTAAAACAAAATTGCACACCTAAATATAAACATAGTCATGAAAATAAAAGCATTAAATTAAATGCTCTTTAATTGTTTCTTTAAATTCTTTTTCTCCCATCCCTTTTCTAAAAACTTAATTATAAATTTCGAATTCTCAATTCAATCCAATCCATCCATTGCAGACGAGATTCCATTGGACGAACGAACATCAAATTCAAATGGACAAGACTACCCCTGTCGTTCACGGTAAAATAAATAACAATATATATATATAAAAAATACTCGTTTTTGTTCCAATTTAACATTCAATACCTTTATATTTTCACTCCACTAAGGTTTTGAATTTTTTCAGCAATGGGAATAGAGGGACCAGAGAAAAAGAAGAGCAAAGAAACGACGTCGATTTGGAAGTGTTTGAAGTCGAAGATTTCGCCGGGGAAAAAAGAGGGGACGACGTCGAAAAATGAGCATGGGAAATTCAGCTACGACGCAGTAAGCTACGCTCAAAACTTCGACGACGGGTTGACGAATGCCGATGATGAAGGATCCTCTCGATCCTTTTCTGCAAGATATGCTGTTGCTTCCAAACCCCCACTTAAAAAGAAATAA

mRNA sequence

ATGTTAGCACCTTCTGAGTCAATGGGAATAGAGGGACCAGAGAAAAAGAAGAGCAAAGAAACGACGTCGATTTGGAAGTGTTTGAAGTCGAAGATTTCGCCGGGGAAAAAAGAGGGGACGACGTCGAAAAATGAGCATGGGAAATTCAGCTACGACGCAGTAAGCTACGCTCAAAACTTCGACGACGGGTTGACGAATGCCGATGATGAAGGATCCTCTCGATCCTTTTCTGCAAGATATGCTGTTGCTTCCAAACCCCCACTTAAAAAGAAATAA

Coding sequence (CDS)

ATGTTAGCACCTTCTGAGTCAATGGGAATAGAGGGACCAGAGAAAAAGAAGAGCAAAGAAACGACGTCGATTTGGAAGTGTTTGAAGTCGAAGATTTCGCCGGGGAAAAAAGAGGGGACGACGTCGAAAAATGAGCATGGGAAATTCAGCTACGACGCAGTAAGCTACGCTCAAAACTTCGACGACGGGTTGACGAATGCCGATGATGAAGGATCCTCTCGATCCTTTTCTGCAAGATATGCTGTTGCTTCCAAACCCCCACTTAAAAAGAAATAA

Protein sequence

MLAPSESMGIEGPEKKKSKETTSIWKCLKSKISPGKKEGTTSKNEHGKFSYDAVSYAQNFDDGLTNADDEGSSRSFSARYAVASKPPLKKK
Homology
BLAST of CmaCh09G006030 vs. ExPASy TrEMBL
Match: A0A0A0LJR5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G893310 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.5e-11
Identity = 51/96 (53.12%), Postives = 60/96 (62.50%), Query Frame = 0

Query: 14  EKKKSK-ETTSIWKCLKSKISPGKKEGT-TSKNE-----------------HGKFSYDAV 73
           EK+K+K ET S W+ L+ KI   KKEG   +KN+                  G F YDA+
Sbjct: 5   EKQKNKEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDAL 64

Query: 74  SYAQNFDDGLTNADDEGSSRSFSARYAVASKPPLKK 91
           SYA+NFD+GL NAD EGS RSFSARYAV SKPP KK
Sbjct: 65  SYAKNFDEGLANADGEGSFRSFSARYAVPSKPPAKK 100

BLAST of CmaCh09G006030 vs. ExPASy TrEMBL
Match: A0A4D6NTJ2 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g2997 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.3e-06
Identity = 36/69 (52.17%), Postives = 41/69 (59.42%), Query Frame = 0

Query: 23 SIWKCLKSKISPGKKEGTTSKNEHGKFSYDAVSYAQNFDDGLTNADDEGSSRSFSARYAV 82
          S W CLK K+   KK  T+S    G F YD +SYAQNFDDGL   D+E   R FSARYA 
Sbjct: 17 SCWGCLKMKLPWTKK--TSSYKPVGGFKYDPLSYAQNFDDGLLEDDEESLQRGFSARYAA 76

Query: 83 ASKPPLKKK 92
           S   L K+
Sbjct: 77 PSSHKLLKQ 83

BLAST of CmaCh09G006030 vs. ExPASy TrEMBL
Match: A0A0L9UGW4 (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan04g201000 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.6e-05
Identity = 35/69 (50.72%), Postives = 41/69 (59.42%), Query Frame = 0

Query: 23 SIWKCLKSKISPGKKEGTTSKNEHGKFSYDAVSYAQNFDDGLTNADDEGSSRSFSARYAV 82
          S W CLK K+   K+  T+S    G F YD +SYAQNFDDGL   D+E   R FSARYA 
Sbjct: 17 SCWGCLKIKLPWTKR--TSSCKPVGGFKYDPLSYAQNFDDGLVEDDEESLHRGFSARYAA 76

Query: 83 ASKPPLKKK 92
           S   L K+
Sbjct: 77 PSSHKLLKQ 83

BLAST of CmaCh09G006030 vs. ExPASy TrEMBL
Match: A0A0S3RCU8 (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G109300 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.6e-05
Identity = 35/69 (50.72%), Postives = 41/69 (59.42%), Query Frame = 0

Query: 23 SIWKCLKSKISPGKKEGTTSKNEHGKFSYDAVSYAQNFDDGLTNADDEGSSRSFSARYAV 82
          S W CLK K+   K+  T+S    G F YD +SYAQNFDDGL   D+E   R FSARYA 
Sbjct: 17 SCWGCLKIKLPWTKR--TSSCKPVGGFKYDPLSYAQNFDDGLVEDDEESLHRGFSARYAA 76

Query: 83 ASKPPLKKK 92
           S   L K+
Sbjct: 77 PSSHKLLKQ 83

BLAST of CmaCh09G006030 vs. ExPASy TrEMBL
Match: G7K5Z3 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_5g067050 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.8e-05
Identity = 33/64 (51.56%), Postives = 41/64 (64.06%), Query Frame = 0

Query: 21 TTSIWKCLKSKISPGKKEGTTSKNEHGKFSYDAVSYAQNFDDGLTNADDEGSSRSFSARY 80
          T S W C K K+   K++ T +K+  G F YD +SY+QNFD+GL   DDE S R FSARY
Sbjct: 12 TLSCWGCFKLKLPWTKRKNTCNKST-GGFGYDPLSYSQNFDEGLME-DDEESCRRFSARY 71

Query: 81 AVAS 85
          A  S
Sbjct: 72 AAPS 73

BLAST of CmaCh09G006030 vs. NCBI nr
Match: KAG7024589.1 (hypothetical protein SDJN02_13407, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 156.4 bits (394), Expect = 1.2e-34
Identity = 80/84 (95.24%), Postives = 80/84 (95.24%), Query Frame = 0

Query: 8  MGIEGPEKKKSKETTSIWKCLKSKISPGKKEGTTSKNEHGKFSYDAVSYAQNFDDGLTNA 67
          M IEGPEKKKSKETTSIWKCLKSKIS GKKEGTTSKNEHGKFSYDAVSYAQNFDDGL NA
Sbjct: 1  MEIEGPEKKKSKETTSIWKCLKSKISSGKKEGTTSKNEHGKFSYDAVSYAQNFDDGLANA 60

Query: 68 DDEGSSRSFSARYAVASKPPLKKK 92
          DDEGSSRSFSARYAVASKPP KKK
Sbjct: 61 DDEGSSRSFSARYAVASKPPPKKK 84

BLAST of CmaCh09G006030 vs. NCBI nr
Match: KAG6591707.1 (hypothetical protein SDJN03_14053, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 149.1 bits (375), Expect = 1.9e-32
Identity = 79/84 (94.05%), Postives = 79/84 (94.05%), Query Frame = 0

Query: 8  MGIEGPEKKKSKETTSIWKCLKSKISPGKKEGTTSKNEHGKFSYDAVSYAQNFDDGLTNA 67
          M IEGPEKKKSKET SIWKCLKSKIS GKKEGTTSKNEHGKFSYDAVSYAQNFDDGL NA
Sbjct: 1  MEIEGPEKKKSKETMSIWKCLKSKIS-GKKEGTTSKNEHGKFSYDAVSYAQNFDDGLGNA 60

Query: 68 DDEGSSRSFSARYAVASKPPLKKK 92
          DDEGSSRSFSARYAVASKPP KKK
Sbjct: 61 DDEGSSRSFSARYAVASKPPPKKK 83

BLAST of CmaCh09G006030 vs. NCBI nr
Match: KGN60281.1 (hypothetical protein Csa_002688 [Cucumis sativus])

HSP 1 Score: 78.6 bits (192), Expect = 3.2e-11
Identity = 51/96 (53.12%), Postives = 60/96 (62.50%), Query Frame = 0

Query: 14  EKKKSK-ETTSIWKCLKSKISPGKKEGT-TSKNE-----------------HGKFSYDAV 73
           EK+K+K ET S W+ L+ KI   KKEG   +KN+                  G F YDA+
Sbjct: 5   EKQKNKEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDAL 64

Query: 74  SYAQNFDDGLTNADDEGSSRSFSARYAVASKPPLKK 91
           SYA+NFD+GL NAD EGS RSFSARYAV SKPP KK
Sbjct: 65  SYAKNFDEGLANADGEGSFRSFSARYAVPSKPPAKK 100

BLAST of CmaCh09G006030 vs. NCBI nr
Match: KAG6608120.1 (hypothetical protein SDJN03_01462, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 63.2 bits (152), Expect = 1.4e-06
Identity = 40/82 (48.78%), Postives = 50/82 (60.98%), Query Frame = 0

Query: 15 KKKSKETTSIWKCLKSKISPGKKEGTT-----SKNEHGKFSYDAVSYAQNFDDGLTNADD 74
          +K S+E  S W  LK K+   K+EG       +K  +G F YDA+SYAQNFD+GL + D+
Sbjct: 7  QKSSEELVSCWGRLKLKLLLMKREGNNPCIGDTKPLNGGFRYDALSYAQNFDEGLDDEDE 66

Query: 75 EGSSRSFSARYAVASKPPLKKK 92
          E   R FSARY  ASKP  K K
Sbjct: 67 ELRCRGFSARYVSASKPLPKNK 88

BLAST of CmaCh09G006030 vs. NCBI nr
Match: QCE15984.1 (hypothetical protein DEO72_LG11g2997 [Vigna unguiculata])

HSP 1 Score: 60.5 bits (145), Expect = 8.9e-06
Identity = 36/69 (52.17%), Postives = 41/69 (59.42%), Query Frame = 0

Query: 23 SIWKCLKSKISPGKKEGTTSKNEHGKFSYDAVSYAQNFDDGLTNADDEGSSRSFSARYAV 82
          S W CLK K+   KK  T+S    G F YD +SYAQNFDDGL   D+E   R FSARYA 
Sbjct: 17 SCWGCLKMKLPWTKK--TSSYKPVGGFKYDPLSYAQNFDDGLLEDDEESLQRGFSARYAA 76

Query: 83 ASKPPLKKK 92
           S   L K+
Sbjct: 77 PSSHKLLKQ 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LJR51.5e-1153.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G893310 PE=4 SV=1[more]
A0A4D6NTJ24.3e-0652.17Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g2997 PE=4 SV=... [more]
A0A0L9UGW41.6e-0550.72Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan04g201000 PE... [more]
A0A0S3RCU81.6e-0550.72Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G... [more]
G7K5Z34.8e-0551.56Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_5g067050 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAG7024589.11.2e-3495.24hypothetical protein SDJN02_13407, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6591707.11.9e-3294.05hypothetical protein SDJN03_14053, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN60281.13.2e-1153.13hypothetical protein Csa_002688 [Cucumis sativus][more]
KAG6608120.11.4e-0648.78hypothetical protein SDJN03_01462, partial [Cucurbita argyrosperma subsp. sorori... [more]
QCE15984.18.9e-0652.17hypothetical protein DEO72_LG11g2997 [Vigna unguiculata][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR33168:SF39SUBFAMILY NOT NAMEDcoord: 15..86
NoneNo IPR availablePANTHERPTHR33168STRESS INDUCED PROTEIN-RELATEDcoord: 15..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G006030.1CmaCh09G006030.1mRNA